AKAP1

General Information

Gene Name       : AKAP1
Gene ID             : ENSG00000121057.12
Essential Gene : No

Functions

Localization(RBPImage: AKAP1)

Domains (AlphaFold: AKAP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AKAP1ENSG00000121057.1219.5032.9126.20ENCSR000AEF
HepG2AKAP1ENSG00000121057.12171.2069.99120.59ENCSR985KAT
K562AKAP1ENSG00000121057.1242.1042.9042.50ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 697ENCSR177QQYAKAP1K562ReleasedENCAB496QKBENCSR544UON  
eCLIPeCLIP: 708ENCSR356ZMOAKAP1HepG2ReleasedENCAB496QKBENCSR902XTJ  
knockdown followed by RNA-seq AKAP1-BGKLV08-K562ENCSR338CONAKAP1K562ReleasedENCSR913CAE   shRNAKD% = 99.9,99.8
knockdown followed by RNA-seq AKAP1-BGHLV12-HepG2ENCSR016IDRAKAP1HepG2ReleasedENCSR237YZT   shRNAKD% = 83.2,86.8






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
AKAP1697K562ENCSR177QQYENCSR544UONENCAB496QKBA301-379A1ReleasedENCODE4
AKAP1708HepG2ENCSR356ZMOENCSR902XTJENCAB496QKBA301-379A1ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
AKAP1ENCAB496QKBA301-379A1Released, ENCODE3Released, ENCODE3BGHLV12-3, Released, ENCODE3BGKLV08_3, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
AKAP1K562shRNAENCSR338CONENCSR913CAEAKAP1-LV08-3,AKAP1-LV08-4Nontarget-LV08-1_00003527,nontarget-LV08-2_0000352799.9,99.8ReleasedENCODE3
AKAP1K562shRNABGKLV38-7,BGKLV38-8BGKLV38-1,BGKLV38-2NotSatisfiedENCODE3
AKAP1HepG2shRNAENCSR016IDRENCSR237YZTAKAP1-BGHLV12-3,AKAP1-BGHLV12-4NT-BGHLV12-01,NT-BGHLV12-0283.2,86.8ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    AKAP1: Click to RBP Image Database
  • Cytoplasm
  • Compartment/Organelle
  • Mitochondria












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    AKAP1Product_ID: A301-379A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: AKAP1-human    		 HepG2_Bethyl_A301-379A_1_AKAP1.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using AKAP1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-AKAP1 antibody (lanes under 'AKAP1').
    		 AKAP1-HEPG2.png<br>Caption: Western blot following shRNA against AKAP1 in HepG2 whole cell lysate using AKAP1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNA against AKAP1. AKAP1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
    		 K562_Bethyl_A301-379A_1_AKAP1.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using AKAP1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lanes 4 and 5 are 10% IP enrichment from biological replicates using rabbit polyclonal anti-AKAP1 antibody (lanes under 'AKAP1').
    		 AKAP1-K562.png<br>Caption: Western blot following shRNA against AKAP1 in K562 whole cell lysate using AKAP1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against AKAP1.AKAP1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








    RNA Targets
    • AKAP1 protein binds to 7,281 RNA regions.  





    Proteins bound to RNA
    • AKAP1 RNA is bound by 44 proteins.  






    AKAP1 protein has 7,281 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 7,281 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    AKAP1chr11124790852124790930-3.295034.63794HepG2HEPACAM3'-UTR,intron-Distal
    AKAP1chr177952525579525331-3.261715.57566HepG2NPLOC43'-UTR,intron-Distal
    AKAP1chr19811721811760+4.1426110.77439HepG2PTBP13'-UTR
    AKAP1chr214693568246935713-3.151975.23218HepG2SLC19A1CDS,intron-Distal,intron-Proximal
    AKAP1chr29737180197371895-3.593855.72266HepG2LMAN2L3'-UTR,intron-Distal
    AKAP1chr206252255262522612+3.280586.72146HepG2TPD52L23'-UTR
    AKAP1chr417185841718683-4.4456218.88773HepG2TMEM1293'-UTR,intron-Distal,intron-Proximal
    AKAP1chr9136628597136628652-5.3670020.92989HepG2VAV23'-UTR,intron-Distal
    AKAP1chr167069695170697058-3.1350510.27631HepG2MTSS1L3'-UTR,intron-Distal
    AKAP1chr64285613342856212+4.837759.77766HepG2RPL7L13'-UTR
    AKAP1chr7589498589585-4.844805.97422HepG2PRKAR1B3'-UTR,intron-Distal
    AKAP1chr194301290043012967-4.7604013.48176HepG2CEACAM13'-UTR,intron-Distal
    AKAP1chr10101910505101910566-3.378828.99663HepG2ERLIN13'-UTR,intron-Distal
    AKAP1chr11207237112072429+3.390104.51787HepG2MFN23'-UTR
    AKAP1chr11773498117735060-4.328599.82994HepG2RCC23'-UTR,intron-Distal
    AKAP1chr191897856818978644+4.019639.52145K562UPF13'-UTR
    AKAP1chr9127243574127243664-5.4017720.78052HepG2NR5A13'-UTR,intron-Distal
    AKAP1chr177128040971280468-4.091328.22287HepG2CDC42EP43'-UTR,intron-Distal
    AKAP1chr8144989922144989969-4.781314.92727HepG2PLEC3'-UTR,intron-Distal
    AKAP1chr13638690636386975+3.100174.07409K562AGO13'-UTR
    AKAP1chr15924749259247641-5.2490518.84814HepG2JUN3'-UTR
    AKAP1chr142466046724660542-3.759843.08342HepG2TM9SF1intron-Distal
    AKAP1chr2231743130231743246+6.1920938.52695HepG2ITM2C3'-UTR
    AKAP1chr11116660536116660630-4.413559.26660HepG2APOA53'-UTR,intron-Distal
    AKAP1chr1156220092156220157-4.192388.81165K562SMG53'-UTR,intron-Distal
    AKAP1chr177549340175493445+4.231108.49678HepG2SEPT9CDS
    AKAP1chr1748408474840924-3.379574.01831HepG2SLC25A113'-UTR,intron-Distal,intron-Proximal
    AKAP1chr9111780639111780710-3.574529.95056HepG2TMEM2453'-UTR,intron-Distal
    AKAP1chr2120195526120195593+4.7791212.68573HepG2TMEM373'-UTR
    AKAP1chr168786642487866469-3.8621126.95199HepG2SLC7A53'-UTR,intron-Distal
    AKAP1chr74425286744252917+3.768386.97411K562YKT63'-UTR
    AKAP1chr3197243695197243744-3.200343.03291HepG2BDH1intron-Distal
    AKAP1chr1772152727215303+5.0234876.18219HepG2EIF5A3'-UTR
    AKAP1chr3186793753186793821+5.6054236.38814HepG2ST6GAL13'-UTR
    AKAP1chr177616865276168725+4.9907722.25103HepG2SYNGR23'-UTR,intron-Distal
    AKAP1chr1160966297160966313-6.05283400.00000K562F11R3'-UTR,intron-Distal
    AKAP1chr1613751631375258+4.642615.18972HepG2UBE2I3'-UTR
    AKAP1chr167448647674486511-3.554104.88668HepG2GLG13'-UTR,intron-Distal
    AKAP1chr214627041146270585-5.4820150.61115K562PTTG1IP3'-UTR,intron-Distal,intron-Proximal
    AKAP1chr27345371773453768+5.4499612.12236HepG2SMYD53'-UTR
    AKAP1chr175616777756167831+5.5868012.65011HepG2DYNLL23'-UTR
    AKAP1chr163036364830363707-4.752295.85041HepG2CD2BP23'-UTR,intron-Distal
    AKAP1chr168161179281611900+4.929345.56470K562CMIPintron-Distal
    AKAP1chr12133087641133087695+4.391363.61011HepG2FBRSL1intron-Distal
    AKAP1chr5172743928172743952-4.315497.15385HepG2STC23'-UTR,intron-Distal
    AKAP1chr12773347527733532-4.1368623.13949K562WASF23'-UTR,intron-Distal
    AKAP1chr10102121033102121082+5.36920400.00000HepG2SCD3'-UTR
    AKAP1chr2238483361238483439-3.128324.14428HepG2RAB173'-UTR,intron-Distal,intron-Proximal
    AKAP1chr173333860633338716-3.643493.52299HepG2RAD51L3-RFFL, RFFL3'-UTR,intron-Distal,intron-Proximal
    AKAP1chr174662104146621106-3.390944.40370K562HOXB2CDS,intron-Distal
    AKAP1chr1748407174840785-4.002553.08342HepG2SLC25A113'-UTR,intron-Distal
    AKAP1chr191769296017693016+4.0402011.17775HepG2COLGALT13'-UTR
    AKAP1chr177679353276793605-3.967363.45716HepG2USP363'-UTR,intron-Distal
    AKAP1chr108107351081073651+3.886334.26759HepG2ZMIZ13'-UTR
    AKAP1chr125015823050158261+3.106509.56435HepG2TMBIM63'-UTR
    AKAP1chr116163391461633931+6.9680565.44221HepG2FADS23'-UTR
    AKAP1chr81170236511702415-4.6664668.84728HepG2CTSB3'-UTR,intron-Distal
    AKAP1chr13676970136769790+3.344803.27723HepG2THRAP33'-UTR
    AKAP1chr147017820270178242+4.391365.18972HepG2KIAA02473'-UTR
    AKAP1chr221857144818571521+3.113754.87979HepG2PEX263'-UTR,intron-Distal
    AKAP1chr136969523697082-5.091329.16846HepG2LRRC473'-UTR,intron-Distal
    AKAP1chr11869195869291-5.1635212.15068HepG2CHID13'-UTR,intron-Distal,intron-Proximal
    AKAP1chr13134448431344579-5.8533420.91202K562SDC33'-UTR,intron-Distal
    AKAP1chr194771280847712878+3.094145.54520K562SAE13'-UTR
    AKAP1chr3196729731196729781-4.7369413.74548HepG2MFI23'-UTR,intron-Distal
    AKAP1chr1645620104562065-4.5988710.90209HepG2CDIP13'-UTR,intron-Distal
    AKAP1chr10101910056101910119-4.5646813.98471HepG2ERLIN13'-UTR,intron-Distal
    AKAP1chr203082394130824030+4.9350915.31364HepG2POFUT13'-UTR,intron-Distal
    AKAP1chr202520685725206895+4.195027.98114HepG2ENTPD63'-UTR
    AKAP1chr197892489789311-4.6857110.09795HepG2CLSTN13'-UTR,intron-Distal
    AKAP1chr12766263027662749+5.1069312.41865HepG2TMEM2223'-UTR
    AKAP1chr177407901574079111-5.3551925.68369HepG2EXOC73'-UTR,intron-Distal,intron-Proximal
    AKAP1chr205598370855983797+4.768388.52836K562RBM383'-UTR
    AKAP1chr9136334364136334447+4.207569.44844HepG2CACFD13'-UTR
    AKAP1chr116815691968156974+3.295034.01829HepG2LRP5intron-Distal
    AKAP1chr722918912291977-3.930363.45716HepG2SNX83'-UTR,intron-Distal
    AKAP1chr73304510333045175+4.052326.62084HepG2FKBP9, AVL93'-UTR,intron-Distal,intron-Proximal
    AKAP1chr206159936461599419+3.6688417.53024HepG2SLC17A93'-UTR
    AKAP1chr1160184255160184309+4.748485.97422HepG2PEA153'-UTR
    AKAP1chr10135176099135176166-4.6609411.61205HepG2ECHS13'-UTR,intron-Distal
    AKAP1chr637234603723524-4.835396.11802HepG2PXDC13'-UTR,intron-Distal
    AKAP1chr463045606304618+3.557314.77155HepG2WFS13'-UTR
    AKAP1chr174106471241064766+4.2810523.64149HepG2G6PC3'-UTR
    AKAP1chr11954391719543959-4.435096.68355HepG2EMC13'-UTR,intron-Distal
    AKAP1chr63046128030461341+3.282045.50363HepG2HLA-E3'-UTR
    AKAP1chr10102121264102121268+4.97798400.00000HepG2SCD3'-UTR
    AKAP1chr63744833437448395+4.5948710.03265HepG2CMTR13'-UTR,intron-Distal
    AKAP1chr1914614221461479-3.459694.58535K562C19orf25, CTB-25B13.123'-UTR,intron-Distal
    AKAP1chr12133087654133087694+4.692384.33390K562FBRSL1intron-Distal
    AKAP1chr64297937642979425+4.681334.40113HepG2PPP2R5D3'-UTR
    AKAP1chr12120534800120534853-3.163523.68605HepG2RAB353'-UTR,CDS,intron-Distal
    AKAP1chr77361000473610061+4.9787916.44743HepG2EIF4H3'-UTR
    AKAP1chr224175464241754761+5.207659.17081HepG2ZC3H7B3'-UTR
    AKAP1chr1146630409146630483-3.383803.52299HepG2PRKAB23'-UTR,intron-Distal
    AKAP1chr174712682647126941+4.5662159.58463HepG2IGF2BP13'-UTR
    AKAP1chr154536644145366523+4.015323.61011HepG2SORD3'-UTR
    AKAP1chr1150937964150938029-5.596058.06720HepG2CERS23'-UTR,intron-Distal
    AKAP1chr223822747838227586-3.893863.34655HepG2ANKRD543'-UTR,intron-Distal
    AKAP1chr11184924411849319-6.9412724.77072K562MTHFR3'-UTR,intron-Distal
    AKAP1chr7158187616158187668-3.280583.52299HepG2PTPRN2intron-Distal




    44 proteins are bound to AKAP1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr175518732555187418+3'-UTR,CDS,intron-Proximal3.6415510.57818HepG2AQR
    chr175519761655197667+3'-UTR,CDS,intron-Distal,intron-Proximal3.867979.56778HepG2G3BP1
    chr175519634255196404+3'-UTR,CDS,intron-Proximal3.607124.84058HepG2LIN28B
    chr175519832055198372+3'-UTR,intron-Distal5.5493020.72639K562PUM2
    chr175518744155187516+3'-UTR,CDS4.0643911.00867HepG2G3BP1
    chr175519832655198366+3'-UTR,intron-Distal3.484143.13224HepG2ZC3H11A
    chr175519341255193488+3'-UTR,CDS,intron-Distal,intron-Proximal4.838266.57024HepG2AQR
    chr175519634455196406+3'-UTR,CDS,intron-Proximal3.145216.68279HepG2PPIG
    chr175519837255198436+3'-UTR,intron-Distal3.3007812.33864HepG2DDX55
    chr175519846955198524+3'-UTR,intron-Distal3.749263.07786HepG2UPF1
    chr175519833555198422+3'-UTR,intron-Distal4.130495.98925HepG2FUBP3
    chr175519422755194289+3'-UTR,CDS,intron-Proximal3.165894.54883HepG2PABPN1
    chr175518751455187563+3'-UTR,CDS,intron-Proximal5.305488.16909HepG2AQR
    chr175519825555198323+3'-UTR,intron-Distal3.584538.08922HepG2IGF2BP1
    chr175519770555197780+3'-UTR,intron-Distal,intron-Proximal3.619685.12113HepG2LSM11
    chr175518731755187390+3'-UTR,CDS,intron-Proximal4.0754510.56393HepG2SF3B4
    chr175519834055198372+3'-UTR,intron-Distal3.839193.46680HepG2DDX55
    chr175519627655196369+3'-UTR,CDS,intron-Proximal4.659954.28193HepG2AQR
    chr175519348355193527+3'-UTR,CDS,intron-Distal3.919605.73400HepG2PPIG
    chr175519853355198578+3'-UTR,intron-Distal,intron-Proximal7.2887412.71793K562PUM2
    chr175518912855189190+3'-UTR,CDS,intron-Proximal5.185268.23509HepG2AQR
    chr175518997155190024+3'-UTR,CDS,intron-Proximal4.247767.46483HepG2PRPF8
    chr175519796755198053+3'-UTR,intron-Distal3.1725112.47138HepG2PCBP2
    chr175519761655197660+3'-UTR,CDS,intron-Distal,intron-Proximal3.654075.19325HepG2LARP4
    chr175518908455189173+3'-UTR,CDS,intron-Proximal4.597564.82767HepG2SF3B4
    chr175519578455195814+3'-UTR,CDS3.477348.46997HepG2PPIG
    chr175519423555194288+3'-UTR,CDS3.223458.29694HepG2PPIG
    chr175518732955187419+3'-UTR,CDS,intron-Proximal3.978383.87294K562TARDBP
    chr175519425555194287+3'-UTR,CDS3.474134.74886HepG2BCLAF1
    chr175519823455198292+3'-UTR,intron-Distal6.1567616.56367K562PUM2
    chr175519420655194339+3'-UTR,CDS,intron-Proximal3.324933.54718K562PRPF8
    chr175519822555198297+3'-UTR,intron-Distal3.197073.77005HepG2AKAP1
    chr175518751755187526+3'-UTR,CDS,intron-Proximal3.4580610.63710HepG2PRPF8
    chr175519581055195874+3'-UTR,CDS,intron-Proximal3.806268.08346HepG2PRPF8
    chr175519846855198512+3'-UTR,intron-Distal3.291413.68829K562YBX3
    chr175519831255198452+3'-UTR,intron-Distal4.255327.68798HepG2AKAP1
    chr175518746155187520+3'-UTR,CDS,intron-Proximal3.589529.47710HepG2PPIG
    chr175519186955191906+3'-UTR,CDS3.160454.18458HepG2G3BP1
    chr175518751855187534+3'-UTR,CDS,intron-Proximal5.206366.83960K562AQR
    chr175518750855187529+3'-UTR,CDS,intron-Proximal3.631444.77481HepG2BUD13
    chr175519844955198468+3'-UTR,intron-Distal3.790953.25175K562YBX3
    chr175519420655194261+3'-UTR,CDS,intron-Proximal3.372324.93196HepG2U2AF2
    chr175519199355192050+3'-UTR,CDS,intron-Proximal3.659954.90219HepG2AQR
    chr175519837955198429+3'-UTR,intron-Distal5.970039.99898K562PUM2
    chr175519794955197993+3'-UTR,intron-Distal5.6174524.56952K562PABPC4
    chr175518733355187426+3'-UTR,CDS,intron-Proximal5.4598417.48131K562AQR
    chr175519427655194368+3'-UTR,CDS,intron-Proximal4.0674813.70516HepG2PRPF8
    chr175519574055195784+3'-UTR,CDS,intron-Proximal3.9584913.24023HepG2PPIG
    chr175519362055193671+3'-UTR,CDS,intron-Distal,intron-Proximal3.7845210.48654HepG2PRPF8
    chr175516329455163370+5'-UTR,intron-Distal,intron-Proximal3.572104.02244HepG2NCBP2
    chr175516369855163756+5'-UTR,intron-Distal,intron-Proximal3.724056.02877HepG2SUGP2
    chr175516315255163191+5'-UTR,intron-Distal3.185063.49516HepG2CSTF2T
    chr175516331155163362+5'-UTR,intron-Distal,intron-Proximal3.5016810.58561HepG2XPO5
    chr175516308355163132+5'-UTR,intron-Distal4.906485.55769HepG2XRN2
    chr175516269555162757+5'-UTR,intron-Distal5.5027951.87677HepG2DDX3X
    chr175516261955162731+5'-UTR,intron-Distal3.466798.95719HepG2EIF3H
    chr175516262355162778+5'-UTR,intron-Distal,intron-Proximal3.8039116.14167HepG2NCBP2
    chr175516263955162695+5'-UTR,intron-Distal4.6764752.72700HepG2DDX3X
    chr175516370555163844+5'-UTR,intron-Distal,intron-Proximal3.8438511.65485HepG2HNRNPM
    chr175517317355173239+5'-UTR,intron-Distal3.902837.23308HepG2SUGP2
    chr175518447855184534+CDS,intron-Proximal3.350879.61064HepG2G3BP1
    chr175518385555183953+CDS,intron-Distal,intron-Proximal4.0421011.03852HepG2FXR2
    chr175518291255183012+CDS3.4495013.49843HepG2DDX3X
    chr175518354655183652+CDS4.2221221.34370HepG2G3BP1
    chr175518383355183912+CDS,intron-Distal,intron-Proximal3.9976912.07231HepG2BCLAF1
    chr175518393455183991+CDS,intron-Distal4.2992211.29029HepG2G3BP1
    chr175518356955183643+CDS4.1954110.14604HepG2FXR2
    chr175518401955184053+CDS,intron-Distal4.136053.85494HepG2HLTF
    chr175518453255184547+CDS,intron-Proximal3.6613511.94838HepG2PRPF8
    chr175518348555183542+CDS3.577645.65606HepG2FXR2
    chr175518402655184126+CDS,intron-Distal4.470123.15006K562RBM15
    chr175518380655183867+CDS,intron-Proximal4.587264.72838K562UCHL5
    chr175518449255184565+CDS,intron-Proximal3.248399.16247HepG2PPIG
    chr175518377355183833+CDS,intron-Proximal3.482385.15776HepG2BCLAF1
    chr175518447555184542+CDS,intron-Proximal3.099433.23428HepG2SRSF9
    chr175518381455183883+CDS,intron-Distal,intron-Proximal4.218433.48978HepG2SRSF9
    chr175518452655184611+CDS,intron-Proximal3.1188012.15945HepG2BUD13
    chr175518306655183122+CDS3.391167.25768HepG2RPS3
    chr175518284855182903+CDS4.097716.95142HepG2DDX3X
    chr175518453655184578+CDS,intron-Proximal5.132737.90091HepG2AQR
    chr175518451855184607+CDS,intron-Proximal3.335203.50696K562BUD13
    chr175518346755183546+CDS4.4793212.70358HepG2G3BP1
    chr175518453755184590+CDS,intron-Proximal6.4535318.07825K562AQR
    chr175518377155183835+CDS,intron-Proximal4.0475512.61799HepG2G3BP1
    chr175516644055166485+intron-Distal3.435863.68481HepG2HNRNPM
    chr175517198855172032+intron-Distal3.2763511.12680HepG2SUGP2
    chr175517020255170266+intron-Distal4.352389.06568HepG2MATR3
    chr175518072655180815+intron-Distal5.224829.30647K562LIN28B
    chr175516531455165360+intron-Distal3.684903.90822HepG2HNRNPM
    chr175516275955162797+intron-Distal,intron-Proximal4.659953.95187HepG2AQR
    chr175516978255169863+intron-Distal5.425997.51037HepG2HNRNPM
    chr175517466255174755+intron-Distal4.336155.08344K562TARDBP
    chr175518487255184927+intron-Distal3.088703.93297HepG2HNRNPC
    chr175517055455170583+intron-Distal3.300213.68462HepG2MATR3
    chr175517300455173092+intron-Distal4.965016.25174HepG2MATR3
    chr175517159955171658+intron-Distal3.541395.72064HepG2MATR3
    chr175517165855171719+intron-Distal5.310959.68057HepG2MATR3
    chr175517029955170347+intron-Distal3.951495.61842HepG2MATR3
    chr175517140155171447+intron-Distal4.324179.29383HepG2PTBP1
    chr175516658455166625+intron-Distal3.654317.21600HepG2HNRNPM
    chr175517174455171783+intron-Distal3.457986.71596HepG2SUGP2
    chr175516620455166323+intron-Distal4.9773814.69713HepG2HNRNPM
    chr175516470255164754+intron-Distal4.072375.13840HepG2MATR3
    chr175519366055193746+intron-Distal,intron-Proximal6.6587617.47795HepG2EFTUD2
    chr175517066555170735+intron-Distal3.780718.02679HepG2MATR3
    chr175516594055165993+intron-Distal3.336616.50485HepG2SUGP2
    chr175516469555164776+intron-Distal4.1611915.65618HepG2HNRNPM
    chr175518075555180803+intron-Distal5.8218828.16261HepG2LIN28B
    chr175516345755163541+intron-Distal,intron-Proximal4.256444.48497K562NONO
    chr175516559455165639+intron-Distal3.077194.86332HepG2SUGP2
    chr175516973055169774+intron-Distal4.093613.62366HepG2HNRNPM
    chr175516550255165560+intron-Distal3.819195.92377HepG2MATR3
    chr175516531655165362+intron-Distal3.485843.84025HepG2SUGP2
    chr175516990155169938+intron-Distal3.809026.48659HepG2SUGP2
    chr175517126855171311+intron-Distal3.268077.00841HepG2SUGP2
    chr175518504655185125+intron-Distal4.429695.18738K562TARDBP
    chr175516559955165631+intron-Distal4.139243.51329HepG2MATR3
    chr175516399555164063+intron-Distal,intron-Proximal3.213607.69812HepG2SUGP2
    chr175519725455197329+intron-Distal4.175479.72773HepG2ILF3
    chr175517299355173040+intron-Distal3.622293.59523HepG2SUGP2
    chr175517139455171497+intron-Distal4.6435716.22742HepG2MATR3
    chr175517160455171671+intron-Distal3.415945.84135HepG2PCBP2
    chr175517043855170512+intron-Distal3.360898.28385HepG2SUGP2
    chr175517355955173662+intron-Distal3.265934.97523HepG2HNRNPM
    chr175517304055173092+intron-Distal3.428015.35016HepG2SUGP2
    chr175518454755184586+intron-Proximal3.6702714.05283HepG2PRPF8
    chr175518752655187564+intron-Proximal3.7932611.68643HepG2PRPF8
    chr175518753455187594+intron-Proximal4.9535312.17654K562AQR
    chr175518982755189852+intron-Proximal3.546485.19978HepG2BUD13
    chr175518456355184613+intron-Proximal3.085515.84909HepG2RBM22
    chr175519201655192091+intron-Proximal6.2466511.83658HepG2EFTUD2
    chr175519200155192042+intron-Proximal3.768384.49024K562AQR
    chr175519429155194362+intron-Proximal4.681374.48002K562AQR
    chr175519428855194343+intron-Proximal4.546525.32906HepG2AQR
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    The AKAP1 protein binds to its own RNA.

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    AKAP1chr175519822555198297+3.197073.77005HepG2AKAP13'-UTR,intron-Distal
    AKAP1chr175519831255198452+4.255327.68798HepG2AKAP13'-UTR,intron-Distal


    Diffrential Expression
    • 9,774 differentially expressed genes after Knockdown/Knockout AKAP1 protein.  





    • 100 RBPs can affect the levels of AKAP1.  







    9,774 differentially expressed genes after Knockdown/Knockout AKAP1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 9,774 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    TSPAN6ENSG00000000003.103505.082402806.567400.320502.076201.60840HepG2AKAP1
    SCYL3ENSG00000000457.9361.52930128.299001.4945011.8888010.86150HepG2AKAP1
    C1orf112ENSG00000000460.12186.34210321.21010-0.785604.050303.42410HepG2AKAP1
    CFHENSG00000000971.1131.154000.0000099999.999907.495006.66400HepG2AKAP1
    FUCA2ENSG00000001036.98357.775104223.654600.9845015.8988014.73120HepG2AKAP1
    GCLCENSG00000001084.62726.880501849.262700.560205.084104.39010HepG2AKAP1
    NFYAENSG00000001167.101702.143701042.724400.706906.845106.05000HepG2AKAP1
    STPG1ENSG00000001460.13269.32680119.041101.177806.702805.91600HepG2AKAP1
    NIPAL3ENSG00000001461.12882.40940456.869000.949609.114008.21080HepG2AKAP1
    ENPP4ENSG00000001561.6293.382006.754605.4407035.4999033.87730HepG2AKAP1
    SEMA3FENSG00000001617.7381.31900600.57910-0.655402.331601.83870HepG2AKAP1
    ANKIB1ENSG00000001629.51809.714801394.816600.375602.384101.88600HepG2AKAP1
    CYP51A1ENSG00000001630.113292.1942016107.29820-2.2906059.1538057.21030HepG2AKAP1
    MYH16ENSG00000002079.883.459200.0000099999.9999019.7864018.49810HepG2AKAP1
    BADENSG00000002330.9302.09610157.283100.941505.046004.35410HepG2AKAP1
    LAP3ENSG00000002549.83085.411402479.086400.315601.960901.50390HepG2AKAP1
    CD99ENSG00000002586.133012.546603755.73160-0.318102.049301.58380HepG2AKAP1
    LASP1ENSG00000002834.135251.082308492.89540-0.693608.355607.48600HepG2AKAP1
    SNX11ENSG00000002919.101057.09940590.539700.839907.970907.11980HepG2AKAP1
    M6PRENSG00000003056.35692.838502716.149001.0675017.7648016.53920HepG2AKAP1
    CYP26B1ENSG00000003137.420.496400.582705.136304.103803.47350HepG2AKAP1
    ICA1ENSG00000003147.1352.356101.251605.3864010.557809.58520HepG2AKAP1
    TFPIENSG00000003436.1015438.8450024822.16050-0.685108.450507.57650HepG2AKAP1
    MTMR7ENSG00000003987.91.6436019.96230-3.602403.498002.90850HepG2AKAP1
    SLC7A2ENSG00000003989.123532.7785015710.55700-2.1529069.5582067.48930HepG2AKAP1
    POLDIP2ENSG00000004142.72168.802303279.49780-0.596605.771005.03460HepG2AKAP1
    PLXND1ENSG00000004399.84265.379602080.808501.035409.125508.22190HepG2AKAP1
    CD38ENSG00000004468.89.019800.0000099999.999902.069101.60150HepG2AKAP1
    FKBP4ENSG00000004478.52975.439102329.487400.353002.341701.84810HepG2AKAP1
    RBM6ENSG00000004534.101912.641003420.72920-0.8387010.730009.74940HepG2AKAP1
    RECQLENSG00000004700.111498.38380736.529801.0245012.7977011.74190HepG2AKAP1
    CDC27ENSG00000004897.74397.177603160.820100.476204.086203.45760HepG2AKAP1
    HCCSENSG00000004961.10791.12200390.418501.018809.918908.97810HepG2AKAP1
    DVL2ENSG00000004975.7768.744301273.38690-0.728106.735805.94720HepG2AKAP1
    PRSS22ENSG00000005001.518.858500.0000099999.999904.497903.84160HepG2AKAP1
    UPF1ENSG00000005007.82029.630003083.08930-0.603202.468401.96320HepG2AKAP1
    SKAP2ENSG00000005020.81089.69420689.358000.660505.349304.63920HepG2AKAP1
    SLC25A5ENSG00000005022.55653.7063012111.48550-1.0991019.8461018.55640HepG2AKAP1
    CCDC109BENSG00000005059.1153.2260013.293802.001304.006503.38360HepG2AKAP1
    THSD7AENSG00000005108.1184.741402.374005.1576016.0059014.83570HepG2AKAP1
    RPAP3ENSG00000005175.51333.74110671.055700.9909011.5738010.55900HepG2AKAP1
    ACSM3ENSG00000005187.7413.185401855.83910-2.1672014.0632012.96040HepG2AKAP1
    AC004381.6ENSG00000005189.15132.65280314.43300-1.245108.364607.49460HepG2AKAP1
    CIAPIN1ENSG00000005194.102912.503601603.135100.8613010.953609.96350HepG2AKAP1
    MSL3ENSG00000005302.13483.95380259.359700.899806.263105.50010HepG2AKAP1
    CREBBPENSG00000005339.8841.089301832.31190-1.1233016.0274014.85660HepG2AKAP1
    WDR54ENSG00000005448.12683.61320247.145101.4677016.8531015.65160HepG2AKAP1
    CROTENSG00000005469.7641.44680353.924600.857806.770705.97960HepG2AKAP1
    ABCB4ENSG00000005471.11403.177801324.16180-1.7156030.2360028.71200HepG2AKAP1
    KMT2EENSG00000005483.151006.138702012.82830-1.0004013.2389012.16520HepG2AKAP1
    RHBDD2ENSG00000005486.121968.88250978.031801.0093012.1232011.08870HepG2AKAP1
    ZNF195ENSG00000005801.12788.51800468.650600.750505.873405.13190HepG2AKAP1
    MYCBP2ENSG00000005810.132343.274401259.028500.8961011.2416010.23870HepG2AKAP1
    ITGALENSG00000005844.1331.53800296.04650-3.2307033.2475031.66800HepG2AKAP1
    PDK2ENSG00000005882.7370.08580836.15600-1.1759013.1887012.11670HepG2AKAP1
    ITGA3ENSG00000005884.13603.6713016.293605.2113018.1315016.89690HepG2AKAP1
    ZFXENSG00000005889.11608.965202106.26700-1.7903024.2435022.83950HepG2AKAP1
    LAMP2ENSG00000005893.115005.933406893.96770-0.461703.973803.35370HepG2AKAP1
    GGNBP2ENSG00000005955.81191.091001615.93430-0.440103.004002.45220HepG2AKAP1
    ASB4ENSG00000005981.8509.4827038.305703.7333054.3655052.48290HepG2AKAP1
    C19orf60ENSG00000006015.13133.0595065.131301.030503.330402.75450HepG2AKAP1
    OSBPL7ENSG00000006025.7272.06570163.196400.737201.955801.49970HepG2AKAP1
    TMEM98ENSG00000006042.71851.769003139.84610-0.761808.857207.96530HepG2AKAP1
    TMEM132AENSG00000006118.101843.02940938.735100.973206.272905.50930HepG2AKAP1
    CX3CL1ENSG00000006210.6904.423804348.20360-2.2653043.0158041.28290HepG2AKAP1
    SPATA20ENSG00000006282.152985.727901545.527200.949908.205007.34140HepG2AKAP1
    TNFRSF12AENSG00000006327.92827.93010668.365402.0809026.8563025.39770HepG2AKAP1
    RALAENSG00000006451.3935.720401349.03650-0.527802.331401.83860HepG2AKAP1
    BAIAP2L1ENSG00000006453.92132.82520922.413101.2092018.6755017.42290HepG2AKAP1
    JHDM1DENSG00000006459.61677.208202415.05490-0.526004.424303.77310HepG2AKAP1
    ETV1ENSG00000006468.9188.691400.0000099999.9999042.4197040.69340HepG2AKAP1
    AGKENSG00000006530.111004.93570686.532500.549603.792803.18410HepG2AKAP1
    ALDH3B1ENSG00000006534.1176.86240155.96580-1.020903.805603.19580HepG2AKAP1
    PHTF2ENSG00000006576.12916.04950434.290801.076706.501305.72430HepG2AKAP1
    FARP2ENSG00000006607.9884.487901254.11210-0.503803.560802.96730HepG2AKAP1
    GGCTENSG00000006625.13479.16460651.67620-0.443602.263601.77730HepG2AKAP1
    IFRD1ENSG00000006652.9832.701601106.25340-0.409801.956201.50000HepG2AKAP1
    COX10ENSG00000006695.6364.86740550.14110-0.592403.419202.83640HepG2AKAP1
    GTF2IRD1ENSG00000006704.6621.15800853.13720-0.457802.672702.14980HepG2AKAP1
    PAF1ENSG00000006712.101623.975601013.957700.679406.305705.53980HepG2AKAP1
    ARHGAP44ENSG00000006740.12246.81420128.600600.940404.493303.83740HepG2AKAP1
    ELAC2ENSG00000006744.141302.48980926.036700.492003.434102.85010HepG2AKAP1
    ARSDENSG00000006756.112076.91780465.240502.1583050.8092048.96920HepG2AKAP1
    PNPLA4ENSG00000006757.7571.23700415.926900.457702.313701.82300HepG2AKAP1
    ADIPOR2ENSG00000006831.93134.283207744.31860-1.3050026.4255024.97550HepG2AKAP1
    MARK4ENSG00000007047.10792.692001230.85240-0.634804.216203.57820HepG2AKAP1
    CCDC124ENSG00000007080.6717.59110276.281101.3769015.4357014.28470HepG2AKAP1
    GAS7ENSG00000007237.14127.2928071.173900.838602.381601.88370HepG2AKAP1
    CD79BENSG00000007312.828.663201.165404.620205.313904.60510HepG2AKAP1
    PAX6ENSG00000007372.1660.246601.877405.0039011.5275010.51430HepG2AKAP1
    RPUSD1ENSG00000007376.3356.74490188.641200.919102.257401.77250HepG2AKAP1
    RHBDF1ENSG00000007384.11399.72560134.364101.572807.187306.37460HepG2AKAP1
    BAIAP3ENSG00000007516.9879.88370171.009802.3631022.9123021.54610HepG2AKAP1
    PIGQENSG00000007541.10501.37150300.388000.739002.741702.21210HepG2AKAP1
    TEAD3ENSG00000007866.14540.760301365.27820-1.3361019.8982018.60610HepG2AKAP1
    DNAJC11ENSG00000007923.111930.873001543.317800.323101.881801.43330HepG2AKAP1
    MYLIPENSG00000007944.10252.91380132.484700.932704.534903.87600HepG2AKAP1
    NOX1ENSG00000007952.1320.089702.417103.055002.711202.18440HepG2AKAP1
    E2F2ENSG00000007968.643.00330129.03150-1.585206.327505.56010HepG2AKAP1
    PSMB1ENSG00000008018.87480.811506042.515100.307902.064601.59760HepG2AKAP1
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    100 RBPs can affect the gene expression of AKAP1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    AKAP1ENSG00000121057.81793.057902772.15860-0.628609.440907.61330HepG2AATF
    AKAP1ENSG00000121057.86338.099405150.960100.299102.284401.42410HepG2ABCF1
    AKAP1ENSG00000121057.81819.342003407.03160-0.9051024.0226022.63060HepG2ACO1
    AKAP1ENSG00000121057.8128.552405258.42560-5.35420258.54380254.99980HepG2AKAP1
    AKAP1ENSG00000121057.82906.908003867.68780-0.412003.357902.21840HepG2AKAP8
    AKAP1ENSG00000121057.83112.787304526.38860-0.5402015.0856013.70920HepG2AUH
    AKAP1ENSG00000121057.83555.417604201.09480-0.240701.906701.40180HepG2BOP1
    AKAP1ENSG00000121057.82680.161803421.70060-0.352404.533703.57790HepG2CALR
    AKAP1ENSG00000121057.83364.074204944.85050-0.555704.719703.43110HepG2CCAR1
    AKAP1ENSG00000121057.85217.889904133.635200.336002.865302.07910HepG2CIRBP
    AKAP1ENSG00000121057.81170.926502018.10290-0.785306.000304.87170HepG2CNOT7
    AKAP1ENSG00000121057.82914.449303856.80750-0.404204.129703.30560HepG2CPSF6
    AKAP1ENSG00000121057.82011.780602838.64670-0.496703.544601.93360HepG2CSTF2T
    AKAP1ENSG00000121057.82570.131203699.24320-0.5254011.8612010.70820HepG2CELF1
    AKAP1ENSG00000121057.83559.040403150.792300.175702.052701.32550HepG2DDX19B
    AKAP1ENSG00000121057.83711.559505037.08910-0.440604.142303.39010HepG2DDX3X
    AKAP1ENSG00000121057.82190.363002756.45430-0.331603.485801.96600HepG2DDX52
    AKAP1ENSG00000121057.81735.254702888.25760-0.735109.105807.79600HepG2DDX55
    AKAP1ENSG00000121057.82546.727904327.16360-0.764809.532508.45870HepG2DDX6
    AKAP1ENSG00000121057.83074.081702514.904200.289602.547801.60590HepG2DHX30
    AKAP1ENSG00000121057.83987.377503259.480000.290704.803803.95580HepG2DKC1
    AKAP1ENSG00000121057.82098.216002816.31470-0.424602.912301.77200HepG2AGO1
    AKAP1ENSG00000121057.81954.245702669.61720-0.450004.000602.92480HepG2EIF3D
    AKAP1ENSG00000121057.85872.417604596.760900.353202.511501.90140HepG2EIF4A3
    AKAP1ENSG00000121057.83005.066404475.77500-0.574704.572003.69990HepG2EIF4B
    AKAP1ENSG00000121057.81876.666302386.09520-0.346504.036502.59600HepG2FAM120A
    AKAP1ENSG00000121057.82061.438002914.33280-0.499506.841805.18590HepG2FASTKD2
    AKAP1ENSG00000121057.83243.559305201.20900-0.681308.095606.85600HepG2FIP1L1
    AKAP1ENSG00000121057.81991.943003497.94880-0.8123013.3111011.64550HepG2FUBP3
    AKAP1ENSG00000121057.82009.017803402.88880-0.760307.003805.28100HepG2FUS
    AKAP1ENSG00000121057.83775.721704638.22950-0.296802.247901.62180HepG2FXR1
    AKAP1ENSG00000121057.82384.577904302.48520-0.8514012.4225011.06730HepG2G3BP1
    AKAP1ENSG00000121057.83504.578702632.418600.412804.892904.06650HepG2HNRNPA1
    AKAP1ENSG00000121057.82762.346003655.41120-0.404107.780406.35580HepG2HNRNPA2B1
    AKAP1ENSG00000121057.83209.538504357.01280-0.441004.963904.04900HepG2HNRNPK
    AKAP1ENSG00000121057.82555.120003622.97220-0.5038016.5705015.04410HepG2HNRNPL
    AKAP1ENSG00000121057.82429.017704104.39830-0.756802.922401.91260HepG2IGF2BP3
    AKAP1ENSG00000121057.82460.146902971.19750-0.272305.253204.26910HepG2ILF2
    AKAP1ENSG00000121057.83232.309904398.92210-0.444603.147402.06910HepG2KHSRP
    AKAP1ENSG00000121057.81614.844002588.23210-0.6806011.322209.18490HepG2LARP7
    AKAP1ENSG00000121057.81925.216702793.95220-0.537303.715402.50220HepG2METAP2
    AKAP1ENSG00000121057.83181.165704775.63820-0.586106.530005.57460HepG2NCBP2
    AKAP1ENSG00000121057.85187.429403699.514500.487606.185005.09320HepG2NSUN2
    AKAP1ENSG00000121057.81341.874601844.45690-0.458902.174901.40220HepG2PABPC1
    AKAP1ENSG00000121057.81733.870802879.11920-0.7316022.4387020.47980HepG2PARN
    AKAP1ENSG00000121057.82837.411404540.78560-0.6784023.9270022.43840HepG2PCBP1
    AKAP1ENSG00000121057.84365.910103442.711800.342606.561805.42760HepG2PRPF4
    AKAP1ENSG00000121057.82465.333704620.36490-0.9062039.3392037.77260HepG2PTBP1
    AKAP1ENSG00000121057.84854.518503764.900900.366604.433603.70000HepG2PUF60
    AKAP1ENSG00000121057.83202.161905004.08480-0.6441016.1113014.78170HepG2QKI
    AKAP1ENSG00000121057.83744.880405229.58210-0.481808.137706.77190HepG2RBM15
    AKAP1ENSG00000121057.82850.081204343.55210-0.6079015.2183014.20300HepG2RBM22
    AKAP1ENSG00000121057.82598.238804541.48500-0.8056018.7818017.12960HepG2RBM25
    AKAP1ENSG00000121057.83697.104204789.05540-0.373308.282307.30060HepG2RECQL
    AKAP1ENSG00000121057.85814.795604133.290800.492306.535705.54900HepG2RPLP0
    AKAP1ENSG00000121057.82579.707301908.034200.435003.056001.68300HepG2SART3
    AKAP1ENSG00000121057.82898.746304129.62180-0.510606.704305.64720HepG2SF3B1
    AKAP1ENSG00000121057.82998.515004810.49350-0.6819024.5723023.10780HepG2SF3B4
    AKAP1ENSG00000121057.84111.019803610.123900.187303.181202.43730HepG2SLBP
    AKAP1ENSG00000121057.82669.920903020.74500-0.178102.612601.98400HepG2SMN1
    AKAP1ENSG00000121057.82443.936304905.93770-1.0053055.9360054.42870HepG2SRFBP1
    AKAP1ENSG00000121057.84020.183605021.07400-0.320706.993506.32470HepG2SRSF1
    AKAP1ENSG00000121057.83288.211104443.60610-0.434403.242902.15080HepG2SRSF3
    AKAP1ENSG00000121057.82410.944804084.87700-0.7607030.9230029.46240HepG2SRSF9
    AKAP1ENSG00000121057.86306.269904259.612400.5660020.2555019.14540HepG2SSB
    AKAP1ENSG00000121057.83735.795404227.61230-0.178402.497101.90040HepG2SUCLG1
    AKAP1ENSG00000121057.82296.608002875.07280-0.324102.409101.77260HepG2SUPV3L1
    AKAP1ENSG00000121057.82946.670004513.02700-0.6150015.4704014.30570HepG2TAF15
    AKAP1ENSG00000121057.83176.354004066.80460-0.356503.489202.68610HepG2TARDBP
    AKAP1ENSG00000121057.86639.561304121.338900.687903.347602.17660HepG2TBRG4
    AKAP1ENSG00000121057.82714.743904146.97380-0.6112011.7860010.09070HepG2TIA1
    AKAP1ENSG00000121057.83987.211602826.231500.496408.939008.13260HepG2TIAL1
    AKAP1ENSG00000121057.82368.775302851.68450-0.267703.875603.23100HepG2TRIM56
    AKAP1ENSG00000121057.81268.747601698.29620-0.420703.656702.78570HepG2UCHL5
    AKAP1ENSG00000121057.82515.710603418.54150-0.442402.747101.69660HepG2XRCC6
    AKAP1ENSG00000121057.82560.950103397.41520-0.4078010.326709.16670HepG2ZC3H8
    AKAP1ENSG00000121057.83168.257405220.69810-0.7206039.1054037.67000HepG2ZNF622
    AKAP1ENSG00000121057.81840.609501347.018700.450307.557806.68530K562AGGF1
    AKAP1ENSG00000121057.8167.23390906.47160-2.4384084.8228080.46040K562AKAP1
    AKAP1ENSG00000121057.81740.178801401.615600.312002.426701.81470K562AKAP8L
    AKAP1ENSG00000121057.81377.046601953.05040-0.504204.180003.48760K562AQR
    AKAP1ENSG00000121057.81171.052801698.39470-0.536405.539304.29390K562BOP1
    AKAP1ENSG00000121057.81367.021201805.81870-0.401604.438003.44470K562CPSF6
    AKAP1ENSG00000121057.81816.399601508.354100.268002.172401.40730K562DKC1
    AKAP1ENSG00000121057.81542.342902093.52310-0.440807.066005.99380K562EIF2S2
    AKAP1ENSG00000121057.8620.80390856.22920-0.463903.976902.04320K562FASTKD2
    AKAP1ENSG00000121057.81286.075301837.49810-0.514805.663104.43300K562FMR1
    AKAP1ENSG00000121057.81119.528701557.49770-0.476304.204903.05850K562FTO
    AKAP1ENSG00000121057.8531.34370707.56440-0.413203.387901.88690K562FUS
    AKAP1ENSG00000121057.81570.32480997.884800.6540012.4857011.29370K562FXR1
    AKAP1ENSG00000121057.8488.55140700.83940-0.520603.018902.27430K562G3BP2
    AKAP1ENSG00000121057.81331.472201724.06270-0.372803.392502.51610K562GPKOW
    AKAP1ENSG00000121057.82219.840302789.90270-0.329803.314702.49070K562GRSF1
    AKAP1ENSG00000121057.8902.254701430.83090-0.665209.123708.09060K562HNRNPC
    AKAP1ENSG00000121057.82070.276102887.73020-0.480103.254302.39330K562HSPD1
    AKAP1ENSG00000121057.81298.177101053.477500.301202.365301.58530K562MAGOH
    AKAP1ENSG00000121057.82356.748503090.90950-0.391203.263202.03220K562MSI2
    AKAP1ENSG00000121057.81677.748401168.019400.522403.654202.60770K562NAA15
    AKAP1ENSG00000121057.81548.867501952.41260-0.334002.298101.54070K562PCBP3
    AKAP1ENSG00000121057.81781.541801390.149700.357803.036002.47140K562PUS1
    AKAP1ENSG00000121057.81705.643301354.382400.332603.543702.88630K562RBM15
    AKAP1ENSG00000121057.8914.541401226.80590-0.423802.999502.14860K562RPS19
    AKAP1ENSG00000121057.81850.690301334.395200.471805.456903.93450K562SAFB
    AKAP1ENSG00000121057.81165.361601639.82610-0.492804.036702.84930K562SF3B1
    AKAP1ENSG00000121057.8794.280001003.50760-0.337302.179001.54310K562SRSF1
    AKAP1ENSG00000121057.8621.22470825.56270-0.410303.849602.30230K562SSB
    AKAP1ENSG00000121057.8885.214701165.97440-0.397402.723201.71500K562SUPV3L1
    AKAP1ENSG00000121057.82042.071101502.103300.442905.807904.61100K562SYNCRIP
    AKAP1ENSG00000121057.82255.059002632.92490-0.223502.698601.44610K562TROVE2
    AKAP1ENSG00000121057.8527.35030701.62260-0.411903.370102.48660K562U2AF2
    AKAP1ENSG00000121057.8824.378801234.18420-0.582205.875604.33790K562UCHL5
    AKAP1ENSG00000121057.81623.969202204.16800-0.440707.424406.31680K562UPF1
    AKAP1ENSG00000121057.81342.817701886.04720-0.490103.578802.58540K562WDR3
    AKAP1ENSG00000121057.81785.777402200.40060-0.301202.482901.67360K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    960 alternative splicing events after Knockdown/Knockout AKAP1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 960 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEDSC2ENSG00000134755.10chr18-2864826428648310286459392864817828648859286491170.208000.000000.00000includedHepG2AKAP1
    SESNRNP70ENSG00000104852.10chr19+4960537049606844496046464960472849607890496079920.135000.000000.00000includedHepG2AKAP1
    SESEPT9ENSG00000184640.13chr17+7545024875450445754499067545007875478225754784170.108000.000000.00068includedHepG2AKAP1
    SEYWHAZENSG00000164924.13chr8-1019641561019643561019608411019611281019654961019656160.249000.000000.00000includedHepG2AKAP1
    SEKTN1ENSG00000126777.13chr14+5613988956139973561396465613973056142552561426360.153000.000000.00016includedHepG2AKAP1
    SETTYH3ENSG00000136295.10chr7+2687592268768826870512687272268920026892730.093000.001890.09188includedHepG2AKAP1
    SEKDM5BENSG00000117139.12chr1-2027355242027356322027331762027332732027360532027361880.073000.000400.03010includedHepG2AKAP1
    SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.208000.000000.00078includedHepG2AKAP1
    SEMARK3ENSG00000075413.13chr14+1038947231038947771038714121038716041039152551039153040.067000.001300.06999includedHepG2AKAP1
    SEMATR3ENSG00000015479.13chr5+1386156231386157471386147391386148181386429271386432450.507000.000010.00195includedHepG2AKAP1
    SEDHRS4ENSG00000157326.14chr14+2443549124435626244291102442921224436419244364750.128000.001360.07278includedHepG2AKAP1
    SEC1orf43ENSG00000143612.14chr1-1541923111541924131541869321541870501541928171541930820.096000.001010.05815includedHepG2AKAP1
    SEC1orf43ENSG00000143612.14chr1-1541863681541864221541849331541851001541869321541869920.066000.000140.01301includedHepG2AKAP1
    SEZFAS1ENSG00000177410.8chr20+4789743947897501478970214789710747905581479057970.122000.000210.01813includedHepG2AKAP1
    SEMYL6ENSG00000092841.14chr12+5655440956554454565540265655410456555170565553710.130000.000000.00000includedHepG2AKAP1
    SEIQSEC1ENSG00000144711.9chr3-1294427212944322129423471294302212949848129500250.424000.000000.00010includedHepG2AKAP1
    SEPKP4ENSG00000144283.17chr2+1595350921595351661595303941595305121595369401595379380.120000.000000.00001includedHepG2AKAP1
    SES100A16ENSG00000188643.6chr1-1535813741535815061535804741535806531535816531535818130.193000.000000.00000includedHepG2AKAP1
    SEFBXO31ENSG00000103264.11chr16-8740027987400408873939008739397287400978874011140.688000.002100.09900includedHepG2AKAP1
    SEALDH3A2ENSG00000072210.14chr17+1957646319576588195750331957526919578808195788120.077000.001450.07536includedHepG2AKAP1
    SESLC24A1ENSG00000074621.9chr15+6594400765944097659427196594328065944979659451460.463000.001110.06231includedHepG2AKAP1
    SERANENSG00000132341.7chr12+1313571281313571621313566201313566711313573801313574650.272000.000760.04712includedHepG2AKAP1
    SECIRBPENSG00000099622.9chr19+1272425127252212719791272050127430512748090.142000.000000.00000includedHepG2AKAP1
    SEXPNPEP1ENSG00000108039.13chr10-1116527691116528331116514791116515841116674481116675730.123000.000020.00313includedHepG2AKAP1
    SECKLFENSG00000217555.8chr16+6659702466597120665920926659225166599788665999720.117000.000000.00002includedHepG2AKAP1
    SEPLOD2ENSG00000152952.7chr3-1457956481457957111457945681457946821457969021457970440.176000.000000.00000includedHepG2AKAP1
    SEPFDN5ENSG00000123349.9chr12+5368962253689725536893255368942353691633536917080.054000.000020.00268includedHepG2AKAP1
    SEGEMIN2ENSG00000092208.12chr14+3959419539594240395916333959174739597483395975520.086000.001520.07775includedHepG2AKAP1
    SEARHGEF11ENSG00000132694.14chr1-1569082091569083051569070401569072881569093391569097020.470000.000000.00018includedHepG2AKAP1
    SETCEAL8ENSG00000180964.12chrX-1025095321025096051025079221025089451025100051025101310.125000.000290.02338includedHepG2AKAP1
    SERPL7L1ENSG00000146223.10chr6+4284859842848704428474194284768942851188428513520.070000.000010.00163includedHepG2AKAP1
    SEIL17RBENSG00000056736.5chr3+5388932053889368538868975388702453890870538910130.249000.000000.00019includedHepG2AKAP1
    SENOC2LENSG00000188976.6chr1-8898438899038893838894628913028913930.068000.000430.03207includedHepG2AKAP1
    SENT5C2ENSG00000076685.14chr10-1048605351048607001048596821048597761048608011048608590.061000.000940.05564includedHepG2AKAP1
    SEPPT2ENSG00000221988.8chr6+3212280632122960321223633212255432123464321235600.139000.000020.00319includedHepG2AKAP1
    SEANXA6ENSG00000197043.9chr5-1504901871504902051504893131504894071504966871504967410.122000.000040.00472includedHepG2AKAP1
    SEPQLC1ENSG00000122490.14chr18-7770951877709655777033287770346277710723777110250.101000.000010.00177includedHepG2AKAP1
    SEDTYMKENSG00000168393.8chr2-2426196432426197342426178662426180642426251832426252920.135000.000180.01632includedHepG2AKAP1
    SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.137000.000000.00000includedHepG2AKAP1
    SETBC1D14ENSG00000132405.14chr4+7009250700935270083587008453701160370116750.059000.000130.01220includedHepG2AKAP1
    SERAB17ENSG00000124839.8chr2-2384866462384867982384858992384860252384946402384948000.119000.000210.01832includedHepG2AKAP1
    SEEIF4HENSG00000106682.10chr7+7360457673604636736041517360424873609070736092080.126000.000000.00000includedHepG2AKAP1
    SETEX261ENSG00000144043.7chr2-7121895971219113712167067121694671220825712209050.097000.000000.00031includedHepG2AKAP1
    SEC6orf48ENSG00000204387.8chr6+3180420031804294318031873180322831805012318052120.167000.000010.00206includedHepG2AKAP1
    SERP11-529K1.3ENSG00000260537.1chr16+7034651170346560703331167033325770348804703488580.099000.000430.03207includedHepG2AKAP1
    SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.092000.000070.00810includedHepG2AKAP1
    SEG3BP2ENSG00000138757.10chr4-7664923976649360765871147658723376649459766496540.216000.001980.09509includedHepG2AKAP1
    SESEC31AENSG00000138674.12chr4-8378278383782861837788418377891783784470837845450.201000.000750.04680includedHepG2AKAP1
    SEYIPF1ENSG00000058799.9chr1-5432067354320724543173915431794354325728543258260.281000.000020.00246includedHepG2AKAP1
    SECYP3A5ENSG00000106258.9chr7-9926939399269501992645749926468899270202992703020.275000.000360.02823includedHepG2AKAP1
    SEMAP7D2ENSG00000184368.11chrX-2006894120069064200624812006264220070995200711060.389000.000360.02835includedHepG2AKAP1
    SESLC25A26ENSG00000144741.13chr3+6635487666354961663137556631380366396787663968320.082000.001680.08419includedHepG2AKAP1
    SEMTRRENSG00000124275.10chr5+7873485787363978708827871036787537078754230.256000.000360.02835includedHepG2AKAP1
    SEAHSA2ENSG00000173209.18chr2+6141068161410797614084726140854061411846614119350.062000.000580.03909includedHepG2AKAP1
    SEUXS1ENSG00000115652.10chr2-1067151711067152291067097701067106131067175131067175740.071000.000100.01033includedHepG2AKAP1
    SELEPREL4ENSG00000141696.8chr17-3996595739966086399641103996425639967114399672860.052000.001400.07392includedHepG2AKAP1
    SECES1ENSG00000198848.8chr16-5585430655854391558534465585355155855279558554330.055000.000120.01145includedHepG2AKAP1
    SEMXRA7ENSG00000182534.9chr17-7467992874680009746768587467696174681153746812470.203000.000000.00000includedHepG2AKAP1
    SEINO80EENSG00000169592.10chr16+3000812830008181300078673000793830012078300121570.084000.000000.00047includedHepG2AKAP1
    SEZFYVE19ENSG00000166140.13chr15+4110489641105100411028464110295541105535411056150.200000.000020.00314includedHepG2AKAP1
    SENSFL1CENSG00000088833.13chr20-1436358143636414356111435777143884414389190.073000.000000.00005includedHepG2AKAP1
    SEUSP4ENSG00000114316.8chr3-4931624649316335493152634931588449318176493182800.163000.000320.02604includedHepG2AKAP1
    SEERP29ENSG00000089248.6chr12+1124575591124576981124511191124514131124599531124612550.060000.000000.00000includedHepG2AKAP1
    SESTAG2ENSG00000101972.14chrX+1231552161231552811230959431230959561231563801231565210.586000.000340.02722includedHepG2AKAP1
    SEATG9AENSG00000198925.6chr2-2200931552200932072200926432200927752200937312200940620.168000.000010.00157includedHepG2AKAP1
    SEMORF4L2ENSG00000123562.12chrX-1029396081029396571029334261029335791029400981029401880.159000.000000.00032includedHepG2AKAP1
    SEBAIAP2ENSG00000175866.11chr17+7901066279010761790089507900910879027467790275430.067000.000620.04129includedHepG2AKAP1
    SESERPINA5ENSG00000188488.9chr14+9504795195048047950477309504782795053682950543180.085000.001630.08173includedHepG2AKAP1
    SEMX2ENSG00000183486.8chr21+4276249142762630427543364275449142767513427677120.150000.001020.05843includedHepG2AKAP1
    SEARPP19ENSG00000128989.6chr15-5285638652856443528492965284941952861044528610990.063000.000010.00130includedHepG2AKAP1
    SEMAGI1ENSG00000151276.19chr3-6536141965361587653505276535062165364935653652290.274000.000490.03512includedHepG2AKAP1
    SEMAGI1ENSG00000151276.19chr3-6543369665433732654284666542852465438932654390150.373000.000140.01274includedHepG2AKAP1
    SERNPEPL1ENSG00000142327.7chr2+2415131912415133082415125442415126782415135292415137650.106000.000330.02667includedHepG2AKAP1
    SELMO7ENSG00000136153.15chr13+7638328976383319763784247637867776391296763914140.246000.000010.00142includedHepG2AKAP1
    SETOM1L1ENSG00000141198.9chr17+5298106852981153529782115297828452990026529901760.122000.000600.04014includedHepG2AKAP1
    SECASC4ENSG00000166734.14chr15+4469508444695252446730034467317444705533447079560.149000.000200.01767includedHepG2AKAP1
    SELETMD1ENSG00000050426.11chr12+5144756051447643514458745144599051450132514502850.270000.001320.07103includedHepG2AKAP1
    SEABHD12ENSG00000100997.14chr20-2530083425300954252976832529771425303960253040660.053000.000020.00276includedHepG2AKAP1
    SETBC1D23ENSG00000036054.8chr3+1000306761000307211000292461000293861000349421000350310.215000.000010.00104includedHepG2AKAP1
    SEMTA1ENSG00000182979.13chr14+1059330431059330791059316701059329151059358031059358350.139000.000000.00011includedHepG2AKAP1
    SEHNRNPDENSG00000138668.14chr4-8329268083292737832806238328079283294598832951090.098000.000720.04592includedHepG2AKAP1
    SESPOPENSG00000121067.13chr17-4774538847745440477000944770023847755294477553870.112000.000040.00489includedHepG2AKAP1
    SEAPBB2ENSG00000163697.12chr4-4093709340937156409366304093671640946881409470900.345000.000450.03270includedHepG2AKAP1
    SESH3D19ENSG00000109686.12chr4-1520653711520654401520650611520652021520690731520693380.252000.000000.00005includedHepG2AKAP1
    SER3HDM1ENSG00000048991.12chr2+1363742371363743271363624251363625861363790631363791780.216000.000340.02708includedHepG2AKAP1
    SEKHKENSG00000138030.8chr2+2731734427317479273151992731531627317667273178020.182000.000470.03384includedHepG2AKAP1
    SERSPRY1ENSG00000159579.9chr16+5724150457241597572385085723892057241969572420220.076000.001610.08120includedHepG2AKAP1
    SECRYZENSG00000116791.9chr1-7519606575196104751903947519051875198639751990920.074000.000480.03464includedHepG2AKAP1
    SECRYZENSG00000116791.9chr1-7517278675172888751725827517267875175781751759310.145000.000000.00061includedHepG2AKAP1
    SETIMMDC1ENSG00000113845.5chr3+1192228001192228681192192201192197071192324871192325660.063000.000440.03228includedHepG2AKAP1
    SESP110ENSG00000135899.12chr2-2310814952310816432310796642310798332310845882310846880.113000.000610.04049includedHepG2AKAP1
    SESNX25ENSG00000109762.11chr4+1862725981862727631862676901862678041862746381862747560.216000.001000.05799includedHepG2AKAP1
    SEMDM2ENSG00000135679.17chr12+6920279569202866692019556920227169202987692030720.260000.000000.00078includedHepG2AKAP1
    SERNMTENSG00000101654.13chr18+1373062513730754137267021372672813731474137319330.209000.000570.03878includedHepG2AKAP1
    SEMIER2ENSG00000105556.6chr19-3360823361733343993345423447733447780.295000.000780.04818includedHepG2AKAP1
    SEZNF326ENSG00000162664.12chr1+9047320590473309904705619047065190475646904758450.347000.000730.04640includedHepG2AKAP1
    SEVPS29ENSG00000111237.14chr12-1109373391109373511109338161109340081109398531109399040.173000.000000.00089includedHepG2AKAP1
    SEHLCSENSG00000159267.10chr21-3813731238137473381320273813214238139518381395860.139000.000560.03850includedHepG2AKAP1
    SEZNF268ENSG00000090612.16chr12+1337700131337701191337684931337685891337787291337817590.207000.001660.08323includedHepG2AKAP1
    SEC17orf62ENSG00000178927.12chr17-8040545580405497804044988040457280407045804071680.159000.000090.00930includedHepG2AKAP1





    4 RBPs can affect the splicing of AKAP1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEAKAP1ENSG00000121057.8chr17+551976105519765455196342551964055519863955198703-0.232000.004100.06478excludedHepG2U2AF1
    SEAKAP1ENSG00000121057.8chr17+5518506655185196551828015518453955187385551875190.170000.000020.00303includedHepG2AKAP1
    SEAKAP1ENSG00000121057.8chr17+551853065518540955182801551845395518738555187519-0.095000.007000.08000excludedK562PUS1
    MXEAKAP1ENSG00000121057.8chr17+5518985155189979551918195519199755189158551892855519422055194288-0.051000.000000.000062includedHepG2SF3A3

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The AKAP1 protein affects to its own RNA splicing after knockdown/knockout.

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEAKAP1ENSG00000121057.8chr17+5518506655185196551828015518453955187385551875190.170000.000020.00303includedHepG2AKAP1