COLGALT1

General Information

Gene Name       : COLGALT1
Gene ID             : ENSG00000130309.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: COLGALT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COLGALT1ENSG00000130309.1019.8424.3222.08ENCSR000AEF
HepG2COLGALT1ENSG00000130309.1091.2370.6780.95ENCSR985KAT
K562COLGALT1ENSG00000130309.1070.1157.0363.57ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COLGALT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • COLGALT1 RNA is bound by 32 proteins.  







eCLIP assay for COLGALT1 is not avaliable on ENCORE database.





32 proteins are bound to COLGALT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191769296017693016+3'-UTR4.0402011.17775HepG2AKAP1
chr191769321817693262+3'-UTR3.7663818.94447HepG2AKAP1
chr191769233917692375+3'-UTR5.2641419.14276HepG2UPF1
chr191769305717693106+3'-UTR3.4238915.73864K562YBX3
chr191769364217693653+3'-UTR4.140847.46349HepG2AKAP1
chr191769377617693833+3'-UTR3.248346.27231K562DDX55
chr191769321817693277+3'-UTR6.0440055.46803HepG2UPF1
chr191769368717693745+3'-UTR3.4146010.19436HepG2DDX55
chr191769379317693826+3'-UTR4.2280514.94065K562UPF1
chr191769333817693380+3'-UTR3.351728.03889K562YBX3
chr191769321417693267+3'-UTR3.3711314.45086K562FAM120A
chr191769321917693272+3'-UTR3.442208.72446HepG2TIAL1
chr191769242717692478+3'-UTR5.3535333.20848HepG2UPF1
chr191769231917692394+3'-UTR3.009717.29039HepG2DDX55
chr191769328817693305+3'-UTR4.4838215.88127HepG2AKAP1
chr191769241517692470+3'-UTR4.339694.55369K562LIN28B
chr191769326317693288+3'-UTR4.2974419.16395HepG2AKAP1
chr191769239917692497+3'-UTR4.9417920.21378HepG2LIN28B
chr191769354317693590+3'-UTR3.430707.21622HepG2LARP4
chr191769307417693109+3'-UTR3.9196013.03891K562UPF1
chr191769277917692813+3'-UTR3.7916913.04892HepG2AKAP1
chr191769307117693107+3'-UTR4.9135514.79329HepG2AKAP1
chr191769258317692635+3'-UTR3.053986.83987K562YBX3
chr191769357217693596+3'-UTR4.275087.46349HepG2AKAP1
chr191769349517693563+3'-UTR5.5777923.90403HepG2AKAP1
chr191769368917693742+3'-UTR5.4192221.71525HepG2AKAP1
chr191769369017693740+3'-UTR5.2811926.60370K562UPF1
chr191769326717693327+3'-UTR3.4941414.40547K562FAM120A
chr191769321917693232+3'-UTR3.2925214.18516K562UPF1
chr191769229917692400+3'-UTR4.123613.51789K562IGF2BP2
chr191769295217693006+3'-UTR6.6902726.00782HepG2UPF1
chr191769375917693830+3'-UTR6.1544921.40961HepG2DDX55
chr191769370217693726+3'-UTR6.0097017.47389HepG2UPF1
chr191769377917693824+3'-UTR5.4624023.34197HepG2UPF1
chr191769283517692866+3'-UTR4.335398.49678HepG2AKAP1
chr191769335317693394+3'-UTR4.8217920.66476HepG2UPF1
chr191769232217692401+3'-UTR3.325427.56719HepG2LARP4
chr191769333817693392+3'-UTR4.1549319.42884K562UPF1
chr191769278117692828+3'-UTR3.4278624.96791K562UPF1
chr191769355917693589+3'-UTR5.5388520.95168HepG2UPF1
chr191769350717693559+3'-UTR4.5076619.87641HepG2UPF1
chr191769342617693465+3'-UTR4.080473.35113HepG2ZC3H11A
chr191769321817693266+3'-UTR5.5137714.93947HepG2TIA1
chr191769273417692779+3'-UTR4.1680937.05955HepG2AKAP1
chr191769378017693944+3'-UTR4.7325345.66690K562PABPC4
chr191769363517693684+3'-UTR4.8574823.43131HepG2UPF1
chr191769242217692484+3'-UTR4.2575818.10633HepG2AKAP1
chr191769328117693377+3'-UTR4.9935911.98463HepG2LIN28B
chr191769377217693829+3'-UTR4.1023214.48103HepG2AKAP1
chr191769334217693393+3'-UTR3.8568812.09932HepG2AKAP1
chr191769273217692820+3'-UTR7.93688130.11942HepG2UPF1
chr191769327717693306+3'-UTR5.5956224.82259HepG2UPF1
chr191769233417692377+3'-UTR4.6884110.03265HepG2AKAP1
chr191769385617693878+3'-UTR4.296745.91383HepG2DDX55
chr191769363017693686+3'-UTR3.264678.17836HepG2DDX55
chr191769342917693473+3'-UTR5.7684314.73409HepG2AKAP1
chr191769323217693262+3'-UTR3.1793820.32784K562UPF1
chr191769383817693878+3'-UTR4.691253.28061K562DDX55
chr191766650617666575+5'-UTR,CDS5.8495654.04399HepG2DDX3X
chr191767007117670144+5'-UTR,CDS,intron-Proximal4.795276.03362HepG2AQR
chr191767007617670145+5'-UTR,CDS,intron-Proximal3.877538.13013K562AQR
chr191767013317670189+5'-UTR,CDS3.111483.24192HepG2SND1
chr191766650317666561+5'-UTR,CDS3.690146.10841HepG2RPS3
chr191769144817691555+CDS,intron-Proximal3.859509.17929K562BUD13
chr191769141917691534+CDS,intron-Proximal4.300007.08450HepG2AQR
chr191767834817678355+CDS,intron-Proximal4.6078015.83686K562AQR
chr191766670317666735+CDS5.4896121.14542HepG2DDX3X
chr191767822617678305+CDS3.9989312.76523K562YBX3
chr191769041717690439+CDS,intron-Proximal3.708593.52230K562AQR
chr191768341017683423+CDS,intron-Distal,intron-Proximal4.150675.47926K562AQR
chr191768880117688876+CDS3.646866.68658HepG2RPS3
chr191766663217666703+CDS5.0298772.03795HepG2DDX3X
chr191766678117666794+CDS,intron-Proximal4.227159.29543K562AQR
chr191767015817670233+CDS,intron-Proximal3.204583.39148K562LIN28B
chr191767931717679352+CDS,intron-Proximal3.588078.07578K562YBX3
chr191766657517666632+CDS5.34223400.00000HepG2DDX3X
chr191767831817678349+CDS3.760057.00273K562YBX3
chr191766673517666778+CDS4.6924522.47508HepG2DDX3X
chr191769145017691544+CDS,intron-Proximal6.1690326.70168K562SF3B4
chr191769150317691547+CDS,intron-Proximal3.289928.52456K562AQR
chr191767115617671195+CDS,intron-Proximal4.830328.63502HepG2RPS3
chr191766657517666628+CDS4.504829.57990HepG2RPS3
chr191767019017670231+CDS,intron-Proximal4.093358.46887HepG2RPS3
chr191767017117670231+CDS,intron-Proximal5.9014815.09802HepG2LIN28B
chr191769150617691572+CDS,intron-Proximal3.793417.83545HepG2PPIG
chr191767115517671199+CDS,intron-Proximal3.693826.77216HepG2SND1
chr191766669717666771+CDS3.916986.02664K562DDX3X
chr191767115617671195+CDS,intron-Proximal4.534794.13513HepG2LIN28B
chr191767019117670223+CDS3.243928.52472HepG2DDX3X
chr191769147017691556+CDS,intron-Proximal3.747315.38772K562RBM15
chr191766662817666689+CDS4.4490713.35431HepG2RPS3
chr191767018917670231+CDS,intron-Proximal4.299528.91885HepG2SND1
chr191769036217690424+CDS,intron-Proximal3.332067.51172HepG2PPIG
chr191769089517690956+intron-Distal3.296873.32365K562RBFOX2
chr191768726717687377+intron-Distal5.549158.83340K562GTF2F1
chr191768851117688651+intron-Distal4.106354.57350K562RBFOX2
chr191769077517690846+intron-Distal3.963085.08507K562ZNF622
chr191769050517690553+intron-Distal,intron-Proximal3.964623.49140K562RBFOX2
chr191768754317687624+intron-Distal4.504565.57311HepG2RBFOX2
chr191769058817690633+intron-Distal4.594454.07072K562UCHL5
chr191769053117690625+intron-Distal3.898385.29694K562EFTUD2
chr191769049917690553+intron-Distal,intron-Proximal3.745363.14687K562CSTF2T
chr191768727817687385+intron-Distal5.2605110.28087HepG2RBFOX2
chr191769055317690632+intron-Distal4.837185.25869K562RBFOX2
chr191768342317683454+intron-Distal,intron-Proximal5.344188.34710K562AQR
chr191769077817690828+intron-Distal3.621684.50290K562GTF2F1
chr191768712317687176+intron-Distal4.271563.93366K562RBFOX2
chr191768772317687838+intron-Distal5.283898.83340K562GTF2F1
chr191769047917690551+intron-Distal,intron-Proximal4.165533.18939HepG2RBFOX2
chr191768852017688611+intron-Distal4.362284.17531HepG2RBFOX2
chr191769056717690634+intron-Distal4.192698.55862K562DDX24
chr191769049517690590+intron-Distal,intron-Proximal6.1174816.45857K562GTF2F1
chr191769049617690567+intron-Distal,intron-Proximal5.2872110.57240K562DDX24
chr191769077717690847+intron-Distal3.398434.87883K562BUD13
chr191769048717690584+intron-Distal,intron-Proximal5.0717616.56894HepG2PRPF4
chr191769049517690578+intron-Distal,intron-Proximal3.516954.20198HepG2FAM120A
chr191768779317687846+intron-Distal3.074553.53485K562DROSHA
chr191769051417690634+intron-Distal,intron-Proximal3.1894612.13488K562AQR
chr191769050517690576+intron-Distal,intron-Proximal3.607708.39123HepG2PRPF8
chr191768710517687169+intron-Distal4.322904.07596K562GTF2F1
chr191769059617690636+intron-Distal3.521203.37821K562XRCC6
chr191768775717687869+intron-Distal4.271565.41630K562RBFOX2
chr191769067017690739+intron-Distal3.069494.60395HepG2PRPF4
chr191769059017690647+intron-Distal4.571358.05260K562GTF2F1
chr191769075417690833+intron-Distal4.908807.66822HepG2PRPF4
chr191768366917683757+intron-Distal3.917633.19125K562GTF2F1
chr191769076117690847+intron-Distal3.034173.42007K562RBFOX2
chr191769055117690634+intron-Distal3.067774.46520HepG2CSTF2T
chr191769058417690646+intron-Distal3.023485.24703K562BUD13
chr191768365417683892+intron-Distal3.496054.81973K562RBFOX2
chr191768361017683734+intron-Distal3.855476.29610HepG2RBFOX2
chr191769057417690663+intron-Distal3.994809.55415K562PRPF8
chr191769058417690640+intron-Distal4.3916710.36696HepG2PRPF4
chr191768727917687340+intron-Distal4.129663.71802K562RBFOX2
chr191769075217690834+intron-Distal4.133646.81811K562UCHL5
chr191769050917690645+intron-Distal,intron-Proximal4.110547.20767HepG2GTF2F1
chr191767839517678414+intron-Proximal4.208595.63763K562AQR
chr191767835517678391+intron-Proximal5.3597921.89924K562AQR
chr191769043917690468+intron-Proximal4.030164.49024K562AQR
chr191769143417691501+intron-Proximal4.680079.77897HepG2SF3A3
chr191769143517691507+intron-Proximal3.9267315.71375HepG2SF3B4
chr191768831017688352+intron-Proximal4.916115.69951K562AQR
chr191766679417666859+intron-Proximal4.7978314.93855K562AQR
chr191769171517691761+intron-Proximal4.929355.17615K562AQR
chr191768889817688948+intron-Proximal4.831154.09264K562AQR
chr191769147617691503+intron-Proximal4.0032910.08968K562AQR
chr191767952217679571+intron-Proximal3.442344.98672K562AQR
chr191769145217691476+intron-Proximal3.492113.04871K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for COLGALT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COLGALT1 is not available on ENCORE database.

  • 107 RBPs can affect the levels of COLGALT1.  








The Knockdown/knockout RNA-Seq assay for COLGALT1 is not available on ENCORE database.





107 RBPs can affect the gene expression of COLGALT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COLGALT1ENSG00000130309.62643.357703721.13910-0.493403.391302.35260HepG2ABCF1
COLGALT1ENSG00000130309.63999.548503199.083600.322103.881403.18420HepG2ACO1
COLGALT1ENSG00000130309.62784.117102146.031300.375402.238201.34080HepG2ADAR
COLGALT1ENSG00000130309.64875.495903584.085300.443803.584402.98940HepG2AKAP1
COLGALT1ENSG00000130309.62645.979801945.527600.443504.548203.68470HepG2CPSF6
COLGALT1ENSG00000130309.64281.015803063.289000.482806.392504.77060HepG2CPSF7
COLGALT1ENSG00000130309.61617.192002317.10580-0.518803.230701.72250HepG2CSTF2T
COLGALT1ENSG00000130309.64204.353603494.878800.266503.587302.76290HepG2DAZAP1
COLGALT1ENSG00000130309.62404.013202958.47170-0.299404.066403.07870HepG2DDX19B
COLGALT1ENSG00000130309.62054.072802494.41030-0.280202.280701.65720HepG2DDX21
COLGALT1ENSG00000130309.61888.438902442.35140-0.371104.087602.96650HepG2DDX24
COLGALT1ENSG00000130309.6949.502902277.49880-1.2622010.882508.60600HepG2DDX27
COLGALT1ENSG00000130309.63338.913202434.538900.455603.027802.22470HepG2DDX55
COLGALT1ENSG00000130309.66707.958402949.818501.1851022.0194020.50020HepG2DDX6
COLGALT1ENSG00000130309.61547.685202084.22760-0.429404.533203.29180HepG2DHX30
COLGALT1ENSG00000130309.61977.209903060.53100-0.630309.279808.18500HepG2DKC1
COLGALT1ENSG00000130309.62635.542202160.933900.286303.631902.83200HepG2DNAJC21
COLGALT1ENSG00000130309.66328.425602834.860601.1585025.0766023.42020HepG2EIF2S1
COLGALT1ENSG00000130309.61668.617202356.48760-0.498006.990405.40080HepG2EIF3G
COLGALT1ENSG00000130309.64821.878403132.432500.622206.515605.53350HepG2EIF4A3
COLGALT1ENSG00000130309.62368.338603448.38670-0.542009.276907.91570HepG2EIF4G1
COLGALT1ENSG00000130309.62458.198403222.71230-0.390703.276102.09180HepG2ESF1
COLGALT1ENSG00000130309.62367.246105158.56890-1.1238043.8332041.98830HepG2ETF1
COLGALT1ENSG00000130309.64964.595503757.218200.401902.784502.01130HepG2FIP1L1
COLGALT1ENSG00000130309.62788.805402005.102300.475904.009403.07040HepG2FUBP3
COLGALT1ENSG00000130309.64440.714803161.768900.490005.079104.16200HepG2FXR1
COLGALT1ENSG00000130309.62327.304901815.849400.357902.689601.80560HepG2GEMIN5
COLGALT1ENSG00000130309.63184.946802318.018800.458302.324101.30200HepG2GRSF1
COLGALT1ENSG00000130309.63592.973103053.915700.234403.227502.17500HepG2HDGF
COLGALT1ENSG00000130309.6868.385502181.63660-1.3290033.9973032.21440HepG2HNRNPA1
COLGALT1ENSG00000130309.63795.412803212.159300.240603.702702.64600HepG2HNRNPA2B1
COLGALT1ENSG00000130309.62030.735302426.67930-0.257001.954701.36070HepG2HNRNPC
COLGALT1ENSG00000130309.65352.621202970.819800.8493016.5752015.01520HepG2HNRNPK
COLGALT1ENSG00000130309.65094.946303183.400100.6784035.0511032.97680HepG2HNRNPL
COLGALT1ENSG00000130309.62783.007302410.634700.207102.617502.02860HepG2HNRNPU
COLGALT1ENSG00000130309.62362.684202943.66380-0.317203.412402.61500HepG2IGF2BP1
COLGALT1ENSG00000130309.63711.284202980.413900.316302.451401.81110HepG2IGF2BP2
COLGALT1ENSG00000130309.64276.792302797.951300.612102.230701.35540HepG2IGF2BP3
COLGALT1ENSG00000130309.62171.957502462.38150-0.181102.421901.73100HepG2ILF2
COLGALT1ENSG00000130309.63344.280302924.062700.193602.485601.51800HepG2KIF1C
COLGALT1ENSG00000130309.62947.811202267.066100.378702.500401.42590HepG2LARP7
COLGALT1ENSG00000130309.64088.945303180.373200.362402.625402.01010HepG2MATR3
COLGALT1ENSG00000130309.63613.656902552.777800.501306.558504.71260HepG2NAA15
COLGALT1ENSG00000130309.64983.614803465.544100.5240011.233309.73700HepG2NOL12
COLGALT1ENSG00000130309.63181.947502288.968100.475102.393701.57950HepG2PABPC1
COLGALT1ENSG00000130309.63064.133802386.100600.360706.433105.22440HepG2PARN
COLGALT1ENSG00000130309.63087.646502150.091400.522009.032607.74790HepG2PPIL4
COLGALT1ENSG00000130309.63730.888502706.282200.4631010.657409.28160HepG2PRPF4
COLGALT1ENSG00000130309.62543.464303203.92190-0.333003.708803.09570HepG2PTBP1
COLGALT1ENSG00000130309.64889.607003512.103900.4773018.1691016.91930HepG2PUM1
COLGALT1ENSG00000130309.64380.386603509.427500.319704.452903.61350HepG2PUM2
COLGALT1ENSG00000130309.61895.806003258.40340-0.7814013.4923012.30880HepG2PUS1
COLGALT1ENSG00000130309.61115.102602510.30360-1.1707011.091009.74820HepG2RAVER1
COLGALT1ENSG00000130309.64370.859003784.630600.207702.091101.33180HepG2RBM15
COLGALT1ENSG00000130309.62012.137104311.55050-1.0995045.1963043.58870HepG2RBM22
COLGALT1ENSG00000130309.63801.213803149.001600.271502.747802.07540HepG2RBM25
COLGALT1ENSG00000130309.63159.761003565.52520-0.174301.825701.36650HepG2NELFE
COLGALT1ENSG00000130309.61687.688003220.20130-0.9321019.5381018.05480HepG2RPLP0
COLGALT1ENSG00000130309.61760.293702467.21460-0.487102.886601.92420HepG2RPS10
COLGALT1ENSG00000130309.61343.630101984.86070-0.562903.541302.85470HepG2RPS19
COLGALT1ENSG00000130309.61968.299802521.11100-0.357102.113601.40880HepG2RPS2
COLGALT1ENSG00000130309.61708.775202516.02300-0.558202.326601.59100HepG2RPS3A
COLGALT1ENSG00000130309.64417.078303117.376700.502703.753802.96350HepG2SF3A3
COLGALT1ENSG00000130309.64625.969403172.527600.5440020.5988019.02860HepG2SLBP
COLGALT1ENSG00000130309.62813.475302503.484400.168302.305901.71060HepG2SMN1
COLGALT1ENSG00000130309.63286.913404869.63420-0.5671018.5881017.59320HepG2SRFBP1
COLGALT1ENSG00000130309.62879.336703481.56320-0.274004.288503.73120HepG2SRSF1
COLGALT1ENSG00000130309.63932.080003266.695800.267403.675702.97320HepG2SRSF5
COLGALT1ENSG00000130309.62306.893202936.92580-0.348406.043505.07740HepG2SRSF7
COLGALT1ENSG00000130309.62310.599304227.81490-0.8716034.7516033.40520HepG2SSB
COLGALT1ENSG00000130309.63786.333802536.150600.578108.783207.17960HepG2SUPT6H
COLGALT1ENSG00000130309.61511.694202423.29060-0.680805.709904.79220HepG2SUPV3L1
COLGALT1ENSG00000130309.62863.017002051.602600.480705.412304.44740HepG2TARDBP
COLGALT1ENSG00000130309.64065.630002875.414000.499607.394306.03960HepG2TIA1
COLGALT1ENSG00000130309.61631.488702342.33710-0.521808.305907.52380HepG2TIAL1
COLGALT1ENSG00000130309.63545.579802363.324100.5851017.2373015.98930HepG2TRIM56
COLGALT1ENSG00000130309.62492.153003213.45620-0.366703.093702.43160HepG2U2AF1
COLGALT1ENSG00000130309.64033.415901937.156001.058003.624902.49230HepG2U2AF2
COLGALT1ENSG00000130309.64351.821303421.612900.346802.732201.90040HepG2UBE2L3
COLGALT1ENSG00000130309.61913.641701431.337800.418903.019402.22870HepG2UCHL5
COLGALT1ENSG00000130309.63849.014902764.635800.4773012.9299011.62620HepG2UPF1
COLGALT1ENSG00000130309.63299.473602669.148400.305805.366704.57830HepG2UTP3
COLGALT1ENSG00000130309.61974.336502670.75170-0.4359010.580409.40920HepG2ZC3H8
COLGALT1ENSG00000130309.64267.687603040.571200.4890017.6287016.54360HepG2ZNF622
COLGALT1ENSG00000130309.64345.295002553.673500.7668029.6329027.86890K562AGGF1
COLGALT1ENSG00000130309.63309.503602657.213800.316602.219701.63260K562AKAP8L
COLGALT1ENSG00000130309.62811.015003589.09140-0.352503.487602.84450K562AQR
COLGALT1ENSG00000130309.62076.168101678.857200.306302.277101.33810K562CCAR1
COLGALT1ENSG00000130309.64188.407103172.291500.400807.567005.71250K562CPEB4
COLGALT1ENSG00000130309.62041.658701715.490100.251002.600501.58010K562CSTF2
COLGALT1ENSG00000130309.61552.121601982.63990-0.353205.207003.38030K562DDX27
COLGALT1ENSG00000130309.62543.309402018.253800.333504.405102.63610K562DDX6
COLGALT1ENSG00000130309.62711.009502081.481200.381103.147302.16990K562EFTUD2
COLGALT1ENSG00000130309.63090.709702228.167900.472003.744502.52400K562EIF3D
COLGALT1ENSG00000130309.61633.430801176.959300.472707.023805.76660K562EIF3G
COLGALT1ENSG00000130309.62648.209902079.724200.348503.311102.41750K562EIF4A3
COLGALT1ENSG00000130309.62456.591201872.873300.391305.571203.84650K562EIF4B
COLGALT1ENSG00000130309.62600.440401815.366700.518408.932706.36080K562EWSR1
COLGALT1ENSG00000130309.63052.807202499.446300.288402.396001.60760K562FIP1L1
COLGALT1ENSG00000130309.62530.951901962.010100.367204.757302.31440K562FUBP3
COLGALT1ENSG00000130309.6757.987301040.56770-0.457104.425502.67890K562FUS
COLGALT1ENSG00000130309.62867.426302162.820100.406706.926506.03000K562FXR1
COLGALT1ENSG00000130309.6683.651001126.10840-0.720005.957904.83340K562G3BP2
COLGALT1ENSG00000130309.62470.555203394.22670-0.458204.626803.24930K562HNRNPA1
COLGALT1ENSG00000130309.61698.450302352.37030-0.469905.990105.14490K562HNRNPC
COLGALT1ENSG00000130309.62755.863201651.944600.738208.269706.12870K562IGF2BP2
COLGALT1ENSG00000130309.62148.164201679.954400.354602.986301.73500K562IGF2BP3
COLGALT1ENSG00000130309.61321.581501754.02770-0.408403.289301.65030K562ILF3
COLGALT1ENSG00000130309.62708.626001735.394400.6422010.589608.88010K562MAGOH
COLGALT1ENSG00000130309.62319.994401731.762100.421805.013203.72540K562MATR3
COLGALT1ENSG00000130309.64138.337403159.073800.389405.130303.81470K562MBNL1
COLGALT1ENSG00000130309.62066.333101696.689500.284302.631501.31700K562PCBP1
COLGALT1ENSG00000130309.62135.215201543.937200.467705.366703.99510K562PCBP2
COLGALT1ENSG00000130309.62747.745601686.099200.7045013.6022012.18420K562PTBP1
COLGALT1ENSG00000130309.63567.684802635.221800.437002.230001.73170K562PUS1
COLGALT1ENSG00000130309.6643.505401074.42810-0.739504.505302.63370K562RAVER1
COLGALT1ENSG00000130309.63560.797902567.630900.471708.681407.65740K562RBM15
COLGALT1ENSG00000130309.63189.863902518.008400.341103.585002.34630K562SAFB
COLGALT1ENSG00000130309.62707.271901642.051300.721202.827901.60730K562SF1
COLGALT1ENSG00000130309.64182.681903196.422000.387902.800101.98140K562SF3A3
COLGALT1ENSG00000130309.61475.099901170.885200.333103.259402.32940K562SF3B4
COLGALT1ENSG00000130309.62990.102401653.021800.8550012.5764011.06480K562SRSF1
COLGALT1ENSG00000130309.63415.752002834.449000.269002.818101.99030K562SYNCRIP
COLGALT1ENSG00000130309.62135.427501672.788300.352202.883202.16180K562TARDBP
COLGALT1ENSG00000130309.6896.705901173.73910-0.388403.133001.42700K562TBRG4
COLGALT1ENSG00000130309.62248.026301613.639900.478206.401705.08040K562TIA1
COLGALT1ENSG00000130309.61994.685101583.881200.332602.765401.67450K562TRA2A
COLGALT1ENSG00000130309.62959.482402155.383300.457305.485304.04550K562TRIM56
COLGALT1ENSG00000130309.61502.633201127.293900.414504.709003.66750K562U2AF2
COLGALT1ENSG00000130309.64008.686403434.710800.222802.712202.00020K562UPF1
COLGALT1ENSG00000130309.63030.559204043.17920-0.415904.883103.68640K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COLGALT1 is not available on ENCORE database.





3 RBPs can affect the splicing of COLGALT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECOLGALT1ENSG00000130309.6chr19+176912351769142817690895176910491769150717691714-0.388000.007840.06697excludedK562AQR
SECOLGALT1ENSG00000130309.6chr19+1769089517691049176902901769041817691507176917140.084000.007610.09970includedK562U2AF2
SECOLGALT1ENSG00000130309.6chr19+1769089517691049176902901769041817691507176917140.064000.000270.00637includedK562HNRNPC
A3SSCOLGALT1ENSG00000130309.6chr19+1767008217670230176701191767023017666402176667820.124000.010160.05359longerK562AQR
MXECOLGALT1ENSG00000130309.6chr19+17690895176910491769134417691428176902901769041817691507176917140.505000.012090.073771includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for COLGALT1 is not avaliable on ENCORE database.