LARP7

General Information

Gene Name       : LARP7
Gene ID             : ENSG00000174720.15
Essential Gene : No

Functions

Localization(RBPImage: LARP7)

Domains (AlphaFold: LARP7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LARP7ENSG00000174720.1569.8457.7563.80ENCSR000AEF
HepG2LARP7ENSG00000174720.1517.4039.1028.25ENCSR985KAT
K562LARP7ENSG00000174720.1544.7151.6948.20ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 243ENCSR456KXILARP7K562ReleasedENCAB568DRSENCSR863ZGZ  
eCLIPeCLIP: 298ENCSR961OKALARP7HepG2ReleasedENCAB568DRSENCSR095SIV  
knockdown followed by RNA-seq LARP7-BGKLV21-K562ENCSR770OWWLARP7K562ReleasedENCSR572FFX   shRNAKD% = 77.1,72.3
knockdown followed by RNA-seq LARP7-BGHLV18-HepG2ENCSR624FBYLARP7HepG2ReleasedENCSR674KEK   shRNAKD% = 88.6,95.9






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
LARP7243K562ENCSR456KXIENCSR863ZGZENCAB568DRSA303-723A1ReleasedENCODE3
LARP7298HepG2ENCSR961OKAENCSR095SIVENCAB568DRSA303-723A1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
LARP7ENCAB568DRSA303-723A1Released, ENCODE3Released, ENCODE3BGHLV18-19, Released, ENCODE3BGKLV21-25, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
LARP7K562shRNAENCSR770OWWENCSR572FFXLARP7_BGKLV21_25_17571,LARP7_BGKLV21_26_17572non-target_BGKLV21_1,non-target_BGKLV21_277.1,72.3ReleasedENCODE3
LARP7HepG2shRNAENCSR624FBYENCSR674KEKLARP7_BGHLV18_19,LARP7_BGHLV18_20NT_BGHLV18_1,NT_BGHLV18_288.6,95.9ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    LARP7: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Nucleolus
  • Cytoplasm
  • Compartment/Organelle
  • Unknown Cyto Foci
  • Cytosolic
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    LARP7Product_ID: A303-723A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: LARP7-human    		 HepG2_Bethyl_A303-723A_1_LARP7.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using LARP7 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-LARP7 antibody (lanes under 'LARP7').
    		 LARP7_Secondary_Western.png<br>Caption: Western blot following shRNA against LARP7 in K562 and HepG2 whole cell lysate using LARP7 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 2 and 3 are two different shRNAs against LARP7. Lanes 5-7 follow the same pattern, but in HepG2. LARP7 protein appears as the green band, GAPDH serves as a control and appears in red.
    		 K562_Bethyl_A303-723A_1_LARP7.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using LARP7 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-LARP7 antibody (lanes under 'LARP7').
    		 LARP7_Secondary_Western.png<br>Caption: Western blot following shRNA against LARP7 in K562 and HepG2 whole cell lysate using LARP7 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 2 and 3 are two different shRNAs against LARP7. Lanes 5-7 follow the same pattern, but in HepG2. LARP7 protein appears as the green band, GAPDH serves as a control and appears in red.








    RNA Targets
    • LARP7 protein binds to 300 RNA regions.  





    Proteins bound to RNA
    • LARP7 RNA is bound by 7 proteins.  






    LARP7 protein has 300 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 300 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    LARP7chr1774802117480225+4.10508400.00000K562SNORA67, EIF4A1, SENP3-EIF4A1intron-Distal
    LARP7chr195000104250001049+3.83168400.00000K562RPS11intron-Distal
    LARP7chr111709732117097411-4.81825400.00000HepG2RPS13intron-Distal
    LARP7chr28636312386363129+8.27029400.00000HepG2PTCD3intron-Distal
    LARP7chr1173835442173835477-7.7110137.97561HepG2GAS5intron-Distal,intron-Proximal
    LARP7chr119346639793466469-5.6686942.19173HepG2TAF1Dintron-Distal,intron-Proximal
    LARP7chr3186502597186502618+4.74726400.00000HepG2EIF4A2intron-Distal
    LARP7chr139985796199857966+6.8857611.39978HepG2UBAC2intron-Distal
    LARP7chr116262280662622831-3.36491400.00000HepG2SNHG1intron-Distal,intron-Proximal
    LARP7chr14524216345242179+3.5947561.49771HepG2RPS8intron-Distal
    LARP7chr1774802487480264+4.13273400.00000K562SNORA67, SENP3-EIF4A1, EIF4A1intron-Distal
    LARP7chr1173835119173835163-3.9266326.62281HepG2GAS5intron-Distal,intron-Proximal
    LARP7chr9136217754136217769+6.64093400.00000HepG2RPL7Aintron-Distal,intron-Proximal
    LARP7chr139985815499858180+7.91572400.00000K562UBAC2intron-Distal
    LARP7chr6151640961151640997+5.279325.15614K562AKAP12intron-Distal
    LARP7chr35272676052726826+3.1814121.56729HepG2GNL3intron-Distal,intron-Proximal
    LARP7chr166735555867355609-7.9837214.69854HepG2KCTD19intron-Distal
    LARP7chr116262277562622804-4.00283400.00000HepG2SNHG1intron-Distal,intron-Proximal
    LARP7chr6151640823151640830+5.433035.39669K562AKAP12intron-Distal
    LARP7chr63150421231504227-3.4714520.78296K562DDX39B, ATP6V1G2-DDX39Bintron-Distal,intron-Proximal
    LARP7chr166735560967355656-6.272389.55763HepG2KCTD19intron-Distal
    LARP7chr114678397946783992-6.76916400.00000HepG2CKAP5intron-Distal
    LARP7chr222636013626360169-7.0220319.74638K562CTA-125H2.1intron-Distal
    LARP7chr195000097650000978+4.0016847.32029K562RPS11intron-Distal
    LARP7chr114678399946784003-6.26060400.00000K562CKAP5intron-Distal
    LARP7chr193335378533353852-8.3229232.75545K562SLC7A9intron-Distal
    LARP7chr142186550521865512-7.80392400.00000HepG2CHD8intron-Distal
    LARP7chr28636311586363121+5.23634400.00000K562PTCD3intron-Distal
    LARP7chr139985800399858068+8.75475400.00000K562UBAC2intron-Distal
    LARP7chr22913652929136543+4.6135725.80567HepG2WDR43intron-Distal
    LARP7chr12890526728905272-5.2875722.87065HepG2SNHG12intron-Distal
    LARP7chr167179230771792335-4.3830711.82240HepG2AP1G1intron-Distal
    LARP7chr14524217945242250+3.32469400.00000HepG2RPS8intron-Distal,intron-Proximal
    LARP7chr2207027039207027058+3.53568400.00000HepG2EEF1B2intron-Distal
    LARP7chr177455772674557785+4.4242030.39247HepG2SNHG16intron-Distal
    LARP7chr1722335772233644-4.04628400.00000HepG2TSR1intron-Distal
    LARP7chr203396954233969596-6.6133317.92408HepG2UQCC1intron-Distal
    LARP7chr6132141495132141578+6.5302814.55971HepG2ENPP1intron-Distal
    LARP7chr173390068333900738+7.04345400.00000HepG2RP11-1094M14.11intron-Distal
    LARP7chr117511153375111578+4.4096326.24899HepG2RPS35'-UTR,intron-Distal
    LARP7chr11122929615122929666-3.1350135.16064HepG2HSPA85'-UTR,intron-Distal,intron-Proximal
    LARP7chr2232321168232321186-4.9105931.34173HepG2NCLintron-Distal
    LARP7chr1173833979173834042-4.1473184.61404HepG2GAS5intron-Distal,intron-Proximal
    LARP7chr224296128742961300-8.21935400.00000K562RRP7Bintron-Distal
    LARP7chr117511553475115578+3.5347574.96150HepG2RPS3intron-Distal
    LARP7chr111709624017096281-3.190509.01071HepG2RPS13intron-Distal
    LARP7chr139985806899858085+8.02686400.00000K562UBAC2intron-Distal
    LARP7chr28636308186363123+6.30886400.00000HepG2PTCD3intron-Distal
    LARP7chr2234184511234184527+4.0436249.29467HepG2ATG16L1intron-Distal
    LARP7chr177066018570660240-7.3597061.03335K562SLC39A11intron-Distal
    LARP7chr114678396046783964-6.47761400.00000K562CKAP5intron-Distal
    LARP7chr114678394346783955-5.83952400.00000K562CKAP5intron-Distal
    LARP7chr142186549621865501-7.01302400.00000K562CHD8intron-Distal
    LARP7chr142186546221865482-10.11811400.00000HepG2CHD8intron-Distal
    LARP7chr139985809999858107+7.66516400.00000K562UBAC2intron-Distal
    LARP7chr142186551221865560-7.73955400.00000HepG2CHD8intron-Distal
    LARP7chr11122930072122930084-3.12654400.00000HepG2HSPA85'-UTR,intron-Distal,intron-Proximal
    LARP7chr139985801799858066+6.49499400.00000HepG2UBAC2intron-Distal
    LARP7chr8100305226100305265+6.6878011.39978HepG2VPS13Bintron-Distal
    LARP7chr1780767878076821-3.37716400.00000HepG2TMEM1073'-UTR,intron-Distal
    LARP7chr212647349126473549+5.475484.45147K5627SKintron-Proximal
    LARP7chr28636307086363074+5.65681400.00000HepG2PTCD3intron-Distal
    LARP7chr194825911448259123+4.95090400.00000K562GLTSCR2intron-Distal,intron-Proximal
    LARP7chrM1446614495-3.0733911.41718HepG2MT-ND6CDS
    LARP7chr9136216247136216265+3.4944930.66740HepG2RPL7Aintron-Distal
    LARP7chr1813240101324070-6.7935511.39978HepG2LINC00470intron-Distal
    LARP7chr142186030721860312-9.5693254.91101HepG2CHD8intron-Distal
    LARP7chr224296130442961337-8.44027400.00000K562RRP7Bintron-Distal
    LARP7chr17625516176255232+5.38189400.00000HepG2RABGGTBintron-Distal
    LARP7chr74514429645144334-3.429825.04075K562TBRG4CDS,intron-Distal,intron-Proximal
    LARP7chr17625357176253656+5.00526400.00000HepG2RABGGTBintron-Distal
    LARP7chr48381700583817065-6.0107826.47279HepG2SEC31A, THAP9-AS1intron-Distal,intron-Proximal
    LARP7chr177455491674554947+5.90541400.00000HepG2SNHG16intron-Distal,intron-Proximal
    LARP7chr2203156057203156145+4.3634016.14124HepG2NOP58intron-Distal,intron-Proximal
    LARP7chr35272540552725460+4.697237.81316HepG2GNL3intron-Distal,intron-Proximal
    LARP7chr102519768725197743-6.5220310.07916K562PRTFDC1intron-Distal
    LARP7chr3160232788160232811-3.4959420.34035HepG2KPNA4intron-Distal
    LARP7chr1620152162015272+5.16581400.00000K562SNHG9intron-Distal,intron-Proximal
    LARP7chr114678396446783999-6.22983400.00000K562CKAP5intron-Distal
    LARP7chr469990056999056+9.0717328.02480HepG2AC097382.5, TBC1D14intron-Distal
    LARP7chr2234184527234184578+3.72175400.00000HepG2ATG16L1intron-Distal
    LARP7chr2203157776203157854+3.234218.80935HepG2NOP58intron-Distal
    LARP7chr23935075739350802-5.899475.86595K562SOS1intron-Distal
    LARP7chr469990016999009+5.6686822.52975K562TBC1D14, AC097382.5intron-Distal
    LARP7chr2232325079232325149-4.3890274.66571HepG2NCLintron-Distal,intron-Proximal
    LARP7chr142186036421860415-4.5578663.44516K562CHD8intron-Distal
    LARP7chr1173833514173833577-5.28564400.00000HepG2GAS5intron-Distal,intron-Proximal
    LARP7chrX132887636132887714-3.031589.20014HepG2GPC3CDS,intron-Distal
    LARP7chr152529664025296720+3.5869415.29641HepG2SNHG14, RP11-701H24.10intron-Distal
    LARP7chr116262139562621422-3.5710519.81036HepG2SNHG1intron-Distal,intron-Proximal
    LARP7chr3186502618186502642+4.87138400.00000HepG2EIF4A2intron-Distal
    LARP7chr119346415193464172-3.5946218.38812HepG2TAF1D3'-UTR,intron-Distal
    LARP7chr139985807899858122+7.0058256.76560HepG2UBAC2intron-Distal
    LARP7chr114678403846784046-4.2521180.46722K562CKAP5intron-Distal
    LARP7chr2207027058207027071+4.1969327.34413HepG2EEF1B2intron-Distal
    LARP7chr117511549275115534+3.74408400.00000HepG2RPS3intron-Distal
    LARP7chr201794348517943516-3.11742400.00000HepG2SNX5, OVOL2intron-Distal
    LARP7chr28636307886363081+5.52484400.00000HepG2PTCD3intron-Distal
    LARP7chr142186036621860402-6.41552400.00000HepG2CHD8intron-Distal
    LARP7chr177066006570660134-8.12070133.06735K562SLC39A11intron-Distal




    7 proteins are bound to LARP7 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr4113565823113565874+3'-UTR,5'-UTR,CDS,intron-Proximal3.809108.06634K562UCHL5
    chr4113568426113568505+3'-UTR,CDS,intron-Distal5.4802711.02908K562UCHL5
    chr4113574269113574342+3'-UTR,CDS3.246823.70975K562UCHL5
    chr4113568369113568488+3'-UTR,CDS,intron-Distal4.8053211.98007K562ZNF622
    chr4113568356113568512+3'-UTR,CDS,intron-Distal,intron-Proximal4.734445.37408K562TRA2A
    chr4113568407113568509+3'-UTR,CDS,intron-Distal3.848125.71420K562RBM15
    chr4113570693113570729+3'-UTR,CDS3.152333.02345K562ZNF622
    chr4113568322113568459+3'-UTR,CDS,intron-Distal,intron-Proximal4.319233.22248HepG2TRA2A
    chr4113578599113578680+3'-UTR5.930729.17142K562PUM2
    chr4113568561113568638+3'-UTR,CDS,intron-Distal5.099807.60619K562UCHL5
    chr4113574262113574332+3'-UTR,CDS3.385595.79905HepG2BCLAF1
    chr4113570690113570751+3'-UTR,CDS,intron-Proximal5.183588.06523K562UCHL5
    chr4113567753113567828+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.481204.86973K562UCHL5
    chr4113565822113565869+3'-UTR,5'-UTR,CDS,intron-Proximal3.646147.05173K562ZNF622
    chr4113565822113565904+3'-UTR,5'-UTR,CDS,intron-Proximal4.179134.81549K562GPKOW
    chr4113568365113568509+3'-UTR,CDS,intron-Distal4.9384412.89578HepG2BCLAF1
    chr4113568191113568234+5'-UTR,CDS,intron-Distal,intron-Proximal4.720394.70478HepG2BCLAF1
    chr4113565874113566013+CDS,intron-Distal,intron-Proximal4.4633012.69640K562UCHL5
    chr4113565869113566011+CDS,intron-Distal,intron-Proximal4.8913611.63999K562ZNF622
    chr4113565825113565864+CDS,intron-Proximal4.673845.03746HepG2BCLAF1
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein LARP7 and its RNA.



    Diffrential Expression
    • 3,154 differentially expressed genes after Knockdown/Knockout LARP7 protein.  





    • 55 RBPs can affect the levels of LARP7.  







    3,154 differentially expressed genes after Knockdown/Knockout LARP7 protein :

    Only display 100 entries as example. Please click "View All" button to see all 3,154 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    FUCA2ENSG00000001036.93544.244302921.349300.278702.453701.39060HepG2LARP7
    CYP51A1ENSG00000001630.111786.466603249.53450-0.863102.542701.45670HepG2LARP7
    SLC7A2ENSG00000003989.122666.112305523.73730-1.050906.269404.58270HepG2LARP7
    PLXND1ENSG00000004399.82394.107701500.947000.673505.461103.87400HepG2LARP7
    AK2ENSG00000004455.122310.524902901.89210-0.328802.905201.74330HepG2LARP7
    RBM6ENSG00000004534.102456.709203304.28280-0.427604.445803.00070HepG2LARP7
    ACSM3ENSG00000005187.7539.76520831.49150-0.623406.310004.61600HepG2LARP7
    ZNF195ENSG00000005801.12547.66990401.501900.447803.032501.84220HepG2LARP7
    ITGALENSG00000005844.1319.3507058.45250-1.594903.864002.51540HepG2LARP7
    ITGA3ENSG00000005884.13215.1130068.781001.6449011.871509.67060HepG2LARP7
    ZFXENSG00000005889.11499.77110697.96180-0.481903.580102.28820HepG2LARP7
    CRLF1ENSG00000006016.64856.285702751.051100.819803.944402.58260HepG2LARP7
    TMEM132AENSG00000006118.10789.31950514.776200.616604.083002.69520HepG2LARP7
    SPATA20ENSG00000006282.151553.345201024.743200.600003.956902.59390HepG2LARP7
    TNFRSF12AENSG00000006327.9692.46920386.643800.840608.904306.98780HepG2LARP7
    BAIAP2L1ENSG00000006453.9818.29790620.654700.398702.638601.53180HepG2LARP7
    ELAC2ENSG00000006744.14904.08340684.093500.402202.574301.47890HepG2LARP7
    ADIPOR2ENSG00000006831.91471.676602866.05870-0.9616015.4653013.02430HepG2LARP7
    CCDC124ENSG00000007080.6250.22220118.167201.082306.465104.75880HepG2LARP7
    PAX6ENSG00000007372.1680.6140027.103701.572403.644502.33960HepG2LARP7
    RPUSD1ENSG00000007376.3157.4894064.433101.289303.198201.97850HepG2LARP7
    BAIAP3ENSG00000007516.9152.8443094.429000.694702.531001.44750HepG2LARP7
    TSR3ENSG00000007520.3206.96850125.493500.721702.912201.74810HepG2LARP7
    ST3GAL1ENSG00000008513.10741.465101143.68920-0.625207.144505.36930HepG2LARP7
    BAZ1BENSG00000009954.61980.745602671.82080-0.431804.971803.45290HepG2LARP7
    NCAPD2ENSG00000010292.82611.707003879.70840-0.571008.225406.35990HepG2LARP7
    SCMH1ENSG00000010803.12684.60890973.45650-0.507804.758203.26980HepG2LARP7
    FYNENSG00000010810.131078.53030796.000300.438103.541702.25670HepG2LARP7
    TCEB3ENSG00000011007.81105.82950825.499000.421703.530602.24920HepG2LARP7
    CLCN6ENSG00000011021.17679.821101151.17790-0.759909.646707.65260HepG2LARP7
    MBTD1ENSG00000011258.11973.532001480.86990-0.605102.707501.58590HepG2LARP7
    ANLNENSG00000011426.61812.665102372.56600-0.388303.118001.91230HepG2LARP7
    WIZENSG00000011451.13456.42390276.646800.722205.132303.58790HepG2LARP7
    BRCA1ENSG00000012048.15712.63170926.61120-0.378802.775701.63850HepG2LARP7
    NR1H4ENSG00000012504.9229.33670739.86850-1.6898025.3272022.35990HepG2LARP7
    MVPENSG00000013364.141284.59120650.701000.9811011.365409.22030HepG2LARP7
    ANGEL1ENSG00000013523.5463.08100602.85400-0.380502.383301.33570HepG2LARP7
    GPRC5AENSG00000013588.580.4701031.822101.338303.719402.40340HepG2LARP7
    CHDHENSG00000016391.62074.859702646.35440-0.351003.424902.16310HepG2LARP7
    GLT8D1ENSG00000016864.121056.110001379.81080-0.385703.441102.17610HepG2LARP7
    CYP24A1ENSG00000019186.51450.80480407.798001.8308013.9904011.63370HepG2LARP7
    MRE11AENSG00000020922.8551.60030720.78920-0.386002.443201.38230HepG2LARP7
    CYP3A43ENSG00000021461.126.8016027.92830-2.037802.729801.60380HepG2LARP7
    CPS1ENSG00000021826.101029.479301363.28880-0.405203.480202.20810HepG2LARP7
    C8BENSG00000021852.8155.66870298.86690-0.941006.075504.41610HepG2LARP7
    RNH1ENSG00000023191.12786.01430388.840601.015307.832406.00880HepG2LARP7
    ABCC2ENSG00000023839.65369.893206772.99820-0.334903.540102.25600HepG2LARP7
    DEPDC1ENSG00000024526.12369.77450601.28830-0.701405.985404.33530HepG2LARP7
    PHF20ENSG00000025293.11792.717601010.09260-0.349602.379001.33250HepG2LARP7
    TOMM34ENSG00000025772.71597.03640940.331800.764105.827004.19660HepG2LARP7
    RNASET2ENSG00000026297.111987.103602868.81510-0.529806.668204.94240HepG2LARP7
    B4GALT7ENSG00000027847.9300.08320190.144000.658203.567602.27750HepG2LARP7
    ZCCHC8ENSG00000033030.9431.42090586.67880-0.443502.898601.73850HepG2LARP7
    ABCF2ENSG00000033050.3950.64100705.307300.430503.206101.98400HepG2LARP7
    CHPF2ENSG00000033100.10750.18630487.483600.621805.411103.83330HepG2LARP7
    FUT8ENSG00000033170.12726.90630464.782900.645105.791904.16470HepG2LARP7
    PIAS1ENSG00000033800.9377.72600507.80590-0.426902.468501.40120HepG2LARP7
    UHRF1ENSG00000034063.91226.53770847.504400.533203.275202.04160HepG2LARP7
    TMSB10ENSG00000034510.48863.968304730.789100.9058016.6452014.14750HepG2LARP7
    TIMP2ENSG00000035862.82226.223801162.496100.9373017.9029015.30860HepG2LARP7
    RFC1ENSG00000035928.101970.346902581.38570-0.389703.802002.46980HepG2LARP7
    AGAENSG00000038002.4467.68170356.179300.392802.380201.33340HepG2LARP7
    VCANENSG00000038427.114369.633302998.123500.543407.924806.09100HepG2LARP7
    CDH1ENSG00000039068.14403.44780779.58570-0.950303.842202.49870HepG2LARP7
    RAI14ENSG00000039560.9932.48400730.044500.353002.613401.51140HepG2LARP7
    PQLC2ENSG00000040487.8196.04820104.824500.903104.093302.70400HepG2LARP7
    PHF23ENSG00000040633.8557.05950411.703800.436102.539901.45430HepG2LARP7
    LSG1ENSG00000041802.6521.03850380.694300.452702.658701.54660HepG2LARP7
    TDP1ENSG00000042088.9384.14380509.97160-0.408802.454801.39110HepG2LARP7
    RETSATENSG00000042445.91231.899801534.87450-0.317202.446301.38430HepG2LARP7
    PHF15ENSG00000043143.16348.17260242.398500.522302.679901.56460HepG2LARP7
    PHKA2ENSG00000044446.72060.297902868.32980-0.477405.576803.97650HepG2LARP7
    HSPA5ENSG00000044574.724980.4477019827.548100.333203.748902.42700HepG2LARP7
    CPENSG00000047457.917431.0478029667.29570-0.767205.695304.08370HepG2LARP7
    USP28ENSG00000048028.7561.22620758.17830-0.434002.905201.74330HepG2LARP7
    TSPAN17ENSG00000048140.13444.25720298.231200.574903.559002.27080HepG2LARP7
    NOP16ENSG00000048162.15350.47350227.722000.621903.255802.02630HepG2LARP7
    FAM120AENSG00000048828.121690.334601361.414800.312102.563201.47140HepG2LARP7
    COL9A2ENSG00000049089.91242.67620790.464500.652607.008205.24610HepG2LARP7
    KITLGENSG00000049130.9564.82030220.637001.3560018.9902016.33260HepG2LARP7
    LTBP1ENSG00000049323.11125.3995057.300401.129802.809001.66670HepG2LARP7
    RCN1ENSG00000049449.41498.601101127.948800.409804.133702.73910HepG2LARP7
    CLPTM1LENSG00000049656.91183.37940906.367900.384602.904301.74290HepG2LARP7
    NEDD4LENSG00000049759.123777.302805010.12650-0.407504.549603.08910HepG2LARP7
    DKK3ENSG00000050165.1322.081603.826902.528502.956801.78530HepG2LARP7
    NFE2L3ENSG00000050344.8600.55120400.724900.583605.153103.60480HepG2LARP7
    LETMD1ENSG00000050426.11598.05780804.45940-0.427703.029401.84010HepG2LARP7
    BCAR1ENSG00000050820.12796.88900425.302400.905804.688503.21030HepG2LARP7
    POLQENSG00000051341.9372.79370538.39710-0.530303.791402.46170HepG2LARP7
    CYBAENSG00000051523.6913.37480527.222700.792702.514301.43620HepG2LARP7
    MSMO1ENSG00000052802.81432.449303276.03360-1.193505.609504.00700HepG2LARP7
    TTC17ENSG00000052841.101093.041101608.48140-0.557406.134204.47060HepG2LARP7
    FSTL4ENSG00000053108.1252.49650105.25470-1.003603.328702.08430HepG2LARP7
    FOXN3ENSG00000053254.112276.367803368.40500-0.565305.100703.56290HepG2LARP7
    NOP58ENSG00000055044.61971.879301468.969100.424704.255902.84170HepG2LARP7
    PUM2ENSG00000055917.112750.852903444.67740-0.324502.755101.62260HepG2LARP7
    ITIH1ENSG00000055957.695.74770302.08200-1.6576016.3882013.91510HepG2LARP7
    IL17RBENSG00000056736.51540.074202137.20750-0.472705.365103.79350HepG2LARP7
    GYG2ENSG00000056998.14402.82550545.96000-0.438602.832001.68530HepG2LARP7
    DCBLD2ENSG00000057019.116398.832203078.836501.055309.859007.84910HepG2LARP7
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    55 RBPs can affect the gene expression of LARP7 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    LARP7ENSG00000174720.111380.043801036.917800.412302.615302.09750HepG2AKAP1
    LARP7ENSG00000174720.11799.620101033.54390-0.370204.109103.30280HepG2AUH
    LARP7ENSG00000174720.11786.856101204.38250-0.614106.822705.93120HepG2BOP1
    LARP7ENSG00000174720.11806.148301105.68030-0.455802.855302.15900HepG2CPSF6
    LARP7ENSG00000174720.11829.315301078.28720-0.378704.918403.97140HepG2DAZAP1
    LARP7ENSG00000174720.11697.84110993.30930-0.509303.822403.09870HepG2DDX3X
    LARP7ENSG00000174720.11651.24630853.22490-0.389702.160301.60800HepG2DDX6
    LARP7ENSG00000174720.11422.31300569.28930-0.430804.217803.44460HepG2DNAJC2
    LARP7ENSG00000174720.11416.21050820.27380-0.9788010.886209.75810HepG2EIF2S1
    LARP7ENSG00000174720.111434.668101186.609300.273803.225202.58450HepG2ETF1
    LARP7ENSG00000174720.11929.965201253.35140-0.430503.009402.34560HepG2GPKOW
    LARP7ENSG00000174720.11500.09450645.04320-0.367202.186201.56160HepG2HNRNPC
    LARP7ENSG00000174720.11946.585301196.09850-0.337502.219701.64950HepG2HNRNPLL
    LARP7ENSG00000174720.11480.05300640.78010-0.416603.952203.23850HepG2HNRNPU
    LARP7ENSG00000174720.11723.64690998.00140-0.463802.228101.57400HepG2IGF2BP1
    LARP7ENSG00000174720.11174.01460630.12010-1.8564032.1188028.75350HepG2LARP7
    LARP7ENSG00000174720.11702.06240920.02360-0.390102.205501.63910HepG2MATR3
    LARP7ENSG00000174720.11561.05760941.70460-0.747106.966305.98250HepG2NCBP2
    LARP7ENSG00000174720.11584.83540838.69200-0.520103.791602.95630HepG2PABPC4
    LARP7ENSG00000174720.11768.96310634.290100.277702.138901.38680HepG2PARN
    LARP7ENSG00000174720.11694.05440857.82380-0.305602.548002.01900HepG2PTBP1
    LARP7ENSG00000174720.11762.495601020.68820-0.420703.545002.88140HepG2PUF60
    LARP7ENSG00000174720.11935.668301083.52250-0.211701.999101.47870HepG2PUM1
    LARP7ENSG00000174720.111098.25680781.802600.490202.188001.55480HepG2RAVER1
    LARP7ENSG00000174720.11739.47950978.71550-0.404405.010304.10980HepG2SLBP
    LARP7ENSG00000174720.11694.24000837.88700-0.271302.147601.64190HepG2TAF15
    LARP7ENSG00000174720.11738.453601165.88740-0.658807.292006.19120HepG2TARDBP
    LARP7ENSG00000174720.11611.36990769.94340-0.332702.466801.67490HepG2TIA1
    LARP7ENSG00000174720.11494.35980622.71990-0.333002.200301.74420HepG2TIAL1
    LARP7ENSG00000174720.11758.19200955.08740-0.333103.921103.30070HepG2ZNF622
    LARP7ENSG00000174720.111116.954001410.96280-0.337104.052303.38930K562AGGF1
    LARP7ENSG00000174720.111210.275001468.16080-0.278701.994001.43780K562AKAP8L
    LARP7ENSG00000174720.11763.34390946.67000-0.310502.896001.91530K562BCLAF1
    LARP7ENSG00000174720.111382.299101912.05920-0.468103.621802.72540K562CPSF6
    LARP7ENSG00000174720.11569.67710718.19020-0.334202.353001.39260K562CSTF2
    LARP7ENSG00000174720.111156.471101392.40710-0.267902.686801.49520K562DDX21
    LARP7ENSG00000174720.11525.97430779.66850-0.567905.632804.08060K562DDX3X
    LARP7ENSG00000174720.11697.11950856.45780-0.297002.485601.35240K562EIF2S1
    LARP7ENSG00000174720.111135.69340847.136100.422805.130104.34170K562FXR1
    LARP7ENSG00000174720.111538.041401140.362600.431502.701602.00490K562G3BP2
    LARP7ENSG00000174720.111452.248301825.61040-0.330102.330501.60090K562GPKOW
    LARP7ENSG00000174720.111568.565102006.47920-0.355203.366402.53480K562GRSF1
    LARP7ENSG00000174720.111545.667201873.72680-0.277702.302501.34900K562HNRNPL
    LARP7ENSG00000174720.11891.467001196.43300-0.424504.979703.76670K562HNRNPU
    LARP7ENSG00000174720.11854.417301159.83760-0.440902.837801.79660K562IGF2BP2
    LARP7ENSG00000174720.11115.45320890.57250-2.9474081.2066076.84680K562LARP7
    LARP7ENSG00000174720.111246.632101781.97220-0.515404.163203.07600K562METAP2
    LARP7ENSG00000174720.111275.383801543.77540-0.275504.023103.14170K562NSUN2
    LARP7ENSG00000174720.11828.977801902.25730-1.198308.557906.49200K562PABPN1
    LARP7ENSG00000174720.11902.346001270.51210-0.493703.938502.94600K562PCBP3
    LARP7ENSG00000174720.11723.83410974.54400-0.429103.924902.96400K562POLR2G
    LARP7ENSG00000174720.111617.690402051.87460-0.343002.945002.09470K562PPIG
    LARP7ENSG00000174720.111377.25760706.688400.9626014.6878012.94390K562PRPF8
    LARP7ENSG00000174720.11547.84340713.28270-0.380702.425601.48190K562SRFBP1
    LARP7ENSG00000174720.11676.683701161.36580-0.7793011.203609.79320K562SRSF1
    LARP7ENSG00000174720.111570.79850977.468300.684309.746708.19710K562SYNCRIP
    LARP7ENSG00000174720.11566.88900793.37260-0.484903.324402.29240K562TIAL1
    LARP7ENSG00000174720.11637.95040842.69570-0.401602.903701.93150K562TRIM56
    LARP7ENSG00000174720.111519.703801106.103600.458203.544402.27160K562U2AF1
    LARP7ENSG00000174720.111650.969101142.128200.531507.622306.28330K562U2AF2
    LARP7ENSG00000174720.111316.032501636.89170-0.314804.339703.45900K562UPF1
    LARP7ENSG00000174720.111033.976901400.64640-0.437904.716003.55970K562WDR3
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    287 alternative splicing events after Knockdown/Knockout LARP7 protein :

    Only display 100 entries as example. Please click "View All" button to see all 287 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEZC3H4ENSG00000130749.5chr19-4761415147614213475976454759786547615404476155040.455000.000000.00761includedHepG2LARP7
    SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.117000.000000.00000includedHepG2LARP7
    SEEIF4HENSG00000106682.10chr7+7360457673604636736041517360424873609070736092080.129000.000000.00038includedHepG2LARP7
    SESEC31AENSG00000138674.12chr4-8378278383782861837788418377891783784470837845450.176000.000000.00111includedHepG2LARP7
    SENSFL1CENSG00000088833.13chr20-1436358143651514356111435777143884414389190.054000.000090.08148includedHepG2LARP7
    SEFIP1L1ENSG00000145216.11chr4+5424523954245284542440055424409054245391542454310.388000.000000.00360includedHepG2LARP7
    SEMORF4L2ENSG00000123562.12chrX-1029396081029396571029334261029335791029400981029401880.162000.000040.04047includedHepG2LARP7
    SESLC7A6ENSG00000103064.9chr16+6832122568321338683085936830915268321648683217740.274000.000010.01449includedHepG2LARP7
    SECRYZENSG00000116791.9chr1-7517278675172888751725827517267875175781751759310.193000.000000.00000includedHepG2LARP7
    SEBIRC5ENSG00000089685.10chr17+7621204676212115762107607621087076212744762128620.073000.000060.05352includedHepG2LARP7
    SEGOLGA2ENSG00000167110.12chr9-1310350631310351441310306981310308031310361281310362510.193000.000010.01070includedHepG2LARP7
    SESEPT2ENSG00000168385.13chr2+2422596172422597022422547692422550252422636302422636560.091000.000030.03342includedHepG2LARP7
    SEC20orf24ENSG00000101084.12chr20+3523629235236403352361173523622135238003352381330.119000.000010.01636includedHepG2LARP7
    SECLSTN1ENSG00000171603.12chr1-9797555979761297959429796100980115198013140.181000.000000.00001includedHepG2LARP7
    SEFUBP1ENSG00000162613.12chr1-7843470578434768784338487843388778435608784356990.079000.000100.08611includedHepG2LARP7
    SEGKENSG00000198814.8chrX+3071584830715866307147333071480030718530307185660.065000.000030.02812includedHepG2LARP7
    SEIGF2BP2ENSG00000073792.11chr3-1854109641854110161854104861854105501854143991854144510.135000.000010.01014includedHepG2LARP7
    SESEPT9ENSG00000184640.13chr17+754499717545007875446648754468687547822575478417-0.312000.000010.01154excludedHepG2LARP7
    SECOL18A1ENSG00000182871.10chr21+468897624688990046888155468887004689380846893895-0.163000.000000.00155excludedHepG2LARP7
    SEBPIFB2ENSG00000078898.6chr20+315960053159618431595405315955663159634631596489-0.271000.000000.00415excludedHepG2LARP7
    SECTSBENSG00000164733.16chr8-117218841172197211710837117109881172550911725549-0.100000.000000.00232excludedHepG2LARP7
    SELSM14AENSG00000257103.4chr19+347060283470620534699833346999563470650034706566-0.071000.000050.04861excludedHepG2LARP7
    SESLC39A14ENSG00000104635.9chr8+222505662225074522224799222249212226220822262383-0.211000.000020.02547excludedHepG2LARP7
    SESERPINF2ENSG00000167711.9chr17+164631116463701646136164620216482851648352-0.052000.000120.09361excludedHepG2LARP7
    SERPAINENSG00000129197.10chr17+533139053315315326088532614953358615336196-0.295000.000100.08203excludedHepG2LARP7
    SEMSMO1ENSG00000052802.8chr4+166254491166254777166248872166248916166258940166259089-0.104000.000030.02935excludedHepG2LARP7
    SESLC13A5ENSG00000141485.11chr17-659084765909856588031658965765940976594259-0.191000.000000.00011excludedHepG2LARP7
    SESLC25A6ENSG00000169100.8chrX-150908415091831508133150862015107911510996-0.057000.000000.00011excludedHepG2LARP7
    SESRSF3ENSG00000112081.12chr6+365675973656805336566625365667603656892836568967-0.057000.000090.07887excludedHepG2LARP7
    SEBCLAF1ENSG00000029363.11chr6-136588166136588313136582402136582615136589299136589477-0.131000.000010.01029excludedHepG2LARP7
    SEASB1ENSG00000065802.7chr2+239344351239344504239342189239342336239352982239353368-0.351000.000050.04909excludedHepG2LARP7
    SEKTN1ENSG00000126777.13chr14+5613067256130759561282395612833056133958561340480.207000.000030.02898includedK562LARP7
    SEPIGGENSG00000174227.11chr4+4934324935144930314932784941844943900.407000.000010.01538includedK562LARP7
    SERNF34ENSG00000170633.12chr12+1218405441218406101218379211218380211218539611218541800.182000.000010.01620includedK562LARP7
    SELSRENSG00000105699.12chr19+3575282735752884357498473574996735753448357535950.339000.000000.00037includedK562LARP7
    SEPET112ENSG00000059691.7chr4-1526242331526244521526224801526226701526250021526250470.090000.000080.05950includedK562LARP7
    SERNF10ENSG00000022840.11chr12+1209771701209772711209723901209727711209842071209844040.120000.000000.00673includedK562LARP7
    SENASPENSG00000132780.12chr1+4607299246074009460721534607226346078840460789200.168000.000000.00004includedK562LARP7
    SESERPINH1ENSG00000149257.9chr11+7527477175274815752731007527336475277360752780160.426000.000170.09221includedK562LARP7
    SEC9orf16ENSG00000171159.4chr9+1309242821309252311309225921309227651309257211309261690.225000.000000.00362includedK562LARP7
    SEUBA2ENSG00000126261.8chr19+3492148034921564349193883491947534922765349229380.058000.000110.07283includedK562LARP7
    SENCAPG2ENSG00000146918.15chr7-1584341221584342461584243571584244091584369801584370800.077000.000040.03871includedK562LARP7
    SEPTP4A3ENSG00000184489.7chr8+1424374111424375831424370381424371691424378491424379240.120000.000040.03871includedK562LARP7
    SEPRRC2BENSG00000130723.13chr9+1343498401343519221343488781343491111343531301343533360.339000.000180.09698includedK562LARP7
    SETFPIENSG00000003436.10chr2-1883783421883783731883683741883684971883940901883942120.231000.000040.03927includedK562LARP7
    SEPHPT1ENSG00000054148.13chr9+1397449571397450121397444641397445891397452061397454790.131000.000050.04533includedK562LARP7
    SEGAS5ENSG00000234741.3chr1-1738346471738346851738343661738344201738358981738359340.059000.000010.01008includedK562LARP7
    SEIMPDH2ENSG00000178035.7chr3-4906342749063499490625584906270249063756490638520.057000.000000.00950includedK562LARP7
    SEPI4KBENSG00000143393.12chr1-1512972201512973931512880481512889851512986471512988490.187000.000020.02588includedK562LARP7
    SEYIF1BENSG00000167645.12chr19-3880606438806199388000443880028338806356388064330.113000.000100.06978includedK562LARP7
    SECAPN7ENSG00000131375.5chr3+1528295915283095152822601528236015283684152837600.237000.000120.07537includedK562LARP7
    SEKIFC2ENSG00000167702.7chr8+1456958471456960601456948721456950301456973241456974290.121000.000000.00362includedK562LARP7
    SEARFIP2ENSG00000132254.8chr11-6499808649988264993136499428649996765001890.154000.000020.02473includedK562LARP7
    SEFAM118AENSG00000100376.7chr22+4571995745720107457190554571930845723722457241220.089000.000060.05345includedK562LARP7
    SESRSF1ENSG00000136450.8chr17-5608275856082961560822835608240256083161560833340.055000.000180.09539includedK562LARP7
    SEAPLP2ENSG00000084234.12chr11+1300071501300071861300054571300056101300102921300103780.246000.000000.00013includedK562LARP7
    SEPRELID2ENSG00000186314.7chr5-1452055601452057631452026391452026971452147391452148990.268000.000020.02473includedK562LARP7
    SESTAT5AENSG00000126561.12chr17+404439894044407940441911404420404044763640447811-0.125000.000000.00945excludedK562LARP7
    SEPPDPFENSG00000125534.5chr20+621526366215271662152127621522476215286462153291-0.087000.000010.01806excludedK562LARP7
    SELSRENSG00000105699.12chr19+357534483575359535749847357499673575726135757435-0.230000.000000.00080excludedK562LARP7
    SERPS25ENSG00000118181.6chr11-118888634118888795118888071118888255118888991118889040-0.151000.000050.04602excludedK562LARP7
    SECIZ1ENSG00000148337.15chr9-130950141130950213130947825130948055130952607130952723-0.067000.000060.05345excludedK562LARP7
    SEDLGAP5ENSG00000126787.8chr14-556153115561540255614829556151915561751655617566-0.078000.000000.00704excludedK562LARP7
    SEOGTENSG00000147162.9chrX+707644167076448570757678707579227076775670767873-0.167000.000160.08688excludedK562LARP7
    SESNHG8ENSG00000269893.2chr4+119200098119200292119199912119199947119200543119200586-0.102000.000100.06978excludedK562LARP7
    SEATP5SLENSG00000105341.14chr19-419391764193933941937243419383134193944141939578-0.199000.000010.01249excludedK562LARP7
    SELEF1ENSG00000138795.5chr4-109002741109002825109000647109000770109004511109004602-0.139000.000100.07203excludedK562LARP7
    SENARFENSG00000141562.13chr17+804364468043654380426639804267728043667580436794-0.219000.000110.07203excludedK562LARP7
    SEC12orf57ENSG00000111678.6chr12+705363870537287053199705333670549337055165-0.108000.000040.03927excludedK562LARP7
    SETMX2ENSG00000213593.5chr11+575053075750549857505079575051405750582557505902-0.064000.000190.09698excludedK562LARP7
    SEUPF3AENSG00000169062.10chr13+115051776115051875115048311115048418115051993115052104-0.231000.000010.01591excludedK562LARP7
    SEUPF3AENSG00000169062.10chr13+115064314115064475115057108115057267115067205115067267-0.121000.000000.00945excludedK562LARP7
    SEFCF1ENSG00000119616.7chr14+751815747518164675180187751802557518265375182802-0.144000.000170.09110excludedK562LARP7
    SEHMGA1ENSG00000137309.15chr6+342049803420509434204649342047403420851334208659-0.217000.000040.03871excludedK562LARP7
    SENSDHLENSG00000147383.6chrX+152000177152000244151999510151999661152014825152014976-0.115000.000060.05186excludedK562LARP7
    SEZNHIT3ENSG00000108278.7chr17+348427783484281034842571348426293484865634848743-0.122000.000100.06978excludedK562LARP7
    SEATP5J2ENSG00000241468.3chr7-990568219905688699055931990559789905770899057810-0.068000.000000.00148excludedK562LARP7
    SEPAPOLAENSG00000090060.13chr14+970269859702704897022511970227509702915597029230-0.143000.000000.00113excludedK562LARP7
    SEEIF6ENSG00000242372.2chr20-338684563386863233867744338679213387197833872295-0.085000.000110.07203excludedK562LARP7
    SEMMACHCENSG00000132763.10chr1+459730274597322245965724459660854597388345974036-0.328000.000000.00080excludedK562LARP7
    SERPS24ENSG00000138326.14chr10+797999617979998379796951797970627980037279800455-0.094000.000000.00000excludedK562LARP7
    A5SSPIGGENSG00000174227.11chr4+4930284935144930284932784941844943900.385000.000040.04765longerK562LARP7
    A5SSPHPT1ENSG00000054148.13chr9+1397444641397450121397444641397445891397452061397454740.147000.000010.01817longerK562LARP7
    A5SSQARSENSG00000172053.10chr3-491417564914190449141805491419044914129549141405-0.066000.000080.07724shorterK562LARP7
    A5SSNARFENSG00000141562.13chr17+804178678041819980417867804179488042216280422306-0.054000.000030.04626shorterK562LARP7
    A5SSMRPL11ENSG00000174547.9chr11-662061026620629766206252662062976620563466205730-0.184000.000040.04765shorterK562LARP7
    A5SSCPSF1ENSG00000071894.10chr8-145619593145619710145619602145619710145619448145619515-0.121000.000000.01410shorterK562LARP7
    A5SSPABPC4ENSG00000090621.9chr1-400367684003702140036905400370214003553440035674-0.061000.000110.08665shorterK562LARP7
    A5SSRPL41ENSG00000229117.4chr12+565105515651064756510551565105835651126556511471-0.204000.000010.02304shorterK562LARP7
    RISGSM3ENSG00000100359.16chr22+4080320440803572408032044080333240803416408035720.189000.000130.03509includedK562LARP7
    RINUP85ENSG00000125450.6chr17+7323073173231296732307317323088373231194732312960.134000.000070.02348includedK562LARP7
    RIBRD2ENSG00000204256.8chr6+3294433832945347329443383294471332945218329453470.053000.000010.00401includedK562LARP7
    RISSSCA1ENSG00000173465.3chr11+6533795765338121653379576533798165338074653381210.296000.000030.01430includedK562LARP7
    RIACADVLENSG00000072778.15chr17+7124084712437771240847124149712424271243770.111000.000010.00401includedK562LARP7
    RIC2CD2LENSG00000172375.8chr11+1189822301189831021189822301189823391189830371189831020.230000.000420.08060includedK562LARP7
    RIQARSENSG00000172053.10chr3-4913719349137524491371934913728649137426491375240.051000.000120.03300includedK562LARP7
    RICD151ENSG00000177697.13chr11+8362508368438362508364428367688368430.095000.000100.02978includedK562LARP7
    RIUSP20ENSG00000136878.8chr9+1326423911326441071326423911326425681326427451326441070.170000.000170.04197includedK562LARP7
    RIPLK3ENSG00000173846.8chr1+4526862645269063452686264526882545268939452690630.184000.000210.04726includedK562LARP7
    RICDC42SE1ENSG00000197622.8chr1-1510274911510284691510274911510276021510281521510284690.082000.000450.08385includedK562LARP7





    10 RBPs can affect the splicing of LARP7 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SELARP7ENSG00000174720.11chr4+113570690113570842113568806113568990113571616113571738-0.078000.000940.01995excludedK562SRSF1
    SELARP7ENSG00000174720.11chr4+1135655801135656441135582811135583951135658231135659440.139000.000000.00000includedHepG2U2AF1
    SELARP7ENSG00000174720.11chr4+1135667061135668181135658231135660271135675061135676070.115000.000000.00015includedHepG2HNRNPK
    SELARP7ENSG00000174720.11chr4+1135655801135656441135582811135583951135658231135660270.080000.000000.00000includedHepG2U2AF2
    SELARP7ENSG00000174720.11chr4+113567743113567820113567506113567607113567946113568058-0.088000.000980.01197excludedK562AQR
    SELARP7ENSG00000174720.11chr4+113570690113570842113568851113568990113571616113571760-0.070000.000000.00005excludedK562AQR
    SELARP7ENSG00000174720.11chr4+113566706113566818113565823113566027113567506113567607-0.070000.000700.02934excludedK562FXR1
    SELARP7ENSG00000174720.11chr4+1135667061135668181135658231135660271135675061135676070.108000.001090.07662includedK562SUPV3L1
    SELARP7ENSG00000174720.11chr4+1135667061135668181135658231135660271135675061135676070.166000.000000.00063includedK562HNRNPK
    SELARP7ENSG00000174720.11chr4+1135667061135668181135658231135660271135675061135676070.199000.000150.00393includedK562HNRNPC
    A3SSLARP7ENSG00000174720.11chr4+1135706591135708771135706901135708771135688511135689900.065000.000000.00005longerK562AQR
    A5SSLARP7ENSG00000174720.11chr4+113565823113566027113565823113565924113567506113567607-0.170000.000250.09036shorterK562EIF3G
    A5SSLARP7ENSG00000174720.11chr4+1135658231135660271135658231135659241135675061135676070.165000.000270.02706longerK562RBM15

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    No autoregularoty alternative splicing events between protein LARP7 and its RNA.