ZCCHC8

General Information

Gene Name       : ZCCHC8
Gene ID             : ENSG00000033030.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZCCHC8)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZCCHC8ENSG00000033030.1329.3823.6526.52ENCSR000AEF
HepG2ZCCHC8ENSG00000033030.1313.5922.9518.27ENCSR985KAT
K562ZCCHC8ENSG00000033030.1329.8534.2132.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZCCHC8 is not avaliable on ENCORE database.



Proteins bound to RNA

  • ZCCHC8 RNA is bound by 19 proteins.  







eCLIP assay for ZCCHC8 is not avaliable on ENCORE database.





19 proteins are bound to ZCCHC8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12122973960122974021-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.288646.69476K562BUD13
chr12122973936122974013-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.533788.40988HepG2BCLAF1
chr12122968081122968128-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.796328.14995HepG2U2AF2
chr12122967209122967279-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.276727.41223K562SF3B4
chr12122973969122973998-3'-UTR,5'-UTR,CDS,intron-Distal5.070807.89689K562UCHL5
chr12122973872122973940-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.064386.48028K562PRPF8
chr12122974009122974083-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.722135.75173HepG2QKI
chr12122957682122957791-3'-UTR,intron-Distal5.4295724.39476K562PUM2
chr12122973943122974018-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.150955.91714K562SF3B4
chr12122973998122974013-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.966516.44794K562UCHL5
chr12122973909122974009-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.1964711.57027HepG2PRPF8
chr12122957981122958144-3'-UTR,CDS,intron-Distal3.241283.39306HepG2GRWD1
chr12122985085122985132-5'-UTR,intron-Distal,intron-Proximal3.684555.40420HepG2AQR
chr12122985134122985145-5'-UTR,intron-Distal,intron-Proximal3.221344.14951K562AQR
chr12122983343122983457-5'-UTR,CDS,intron-Distal,intron-Proximal3.699919.14978K562SF3B4
chr12122985351122985425-5'-UTR,CDS,intron-Distal4.304933.58858HepG2NCBP2
chr12122983331122983444-5'-UTR,CDS,intron-Distal,intron-Proximal3.784595.83621K562AQR
chr12122964796122964901-5'-UTR,CDS,intron-Distal,intron-Proximal3.563165.82046K562SF3B4
chr12122977265122977316-5'-UTR,CDS,intron-Distal4.461593.89826HepG2BCLAF1
chr12122964734122964807-5'-UTR,CDS,intron-Distal,intron-Proximal5.491349.32793HepG2BCLAF1
chr12122985068122985134-5'-UTR,intron-Distal,intron-Proximal3.076086.17038K562AQR
chr12122985375122985402-5'-UTR,CDS,intron-Distal3.197543.34231K562RBM15
chr12122968577122968640-5'-UTR,intron-Distal3.500803.69826K562TARDBP
chr12122962789122962863-5'-UTR,CDS,intron-Distal,intron-Proximal4.1718915.49278HepG2U2AF2
chr12122964733122964796-5'-UTR,CDS,intron-Distal,intron-Proximal3.588846.25299K562ZNF622
chr12122985132122985190-5'-UTR,CDS,intron-Distal,intron-Proximal3.3443811.94838HepG2AQR
chr12122966533122966596-CDS,intron-Distal,intron-Proximal3.957784.93978HepG2BCLAF1
chr12122985242122985336-CDS,intron-Distal4.904308.74199HepG2GRWD1
chr12122966160122966213-CDS,intron-Distal,intron-Proximal4.5666310.38007K562UCHL5
chr12122966594122966636-CDS,intron-Distal,intron-Proximal3.241323.12941K562UCHL5
chr12122966489122966503-CDS,intron-Distal,intron-Proximal3.939285.57819K562UCHL5
chr12122966486122966533-CDS,intron-Distal,intron-Proximal5.6759610.47286HepG2BCLAF1
chr12122966119122966161-CDS,intron-Distal3.359823.57857HepG2BCLAF1
chr12122985184122985353-CDS,intron-Distal,intron-Proximal3.4853714.22193K562ZNF622
chr12122958453122958523-CDS,intron-Distal,intron-Proximal3.710315.71420K562RBM15
chr12122962752122962766-CDS,intron-Distal,intron-Proximal4.041143.43980K562ZNF622
chr12122966520122966585-CDS,intron-Distal,intron-Proximal3.891863.34184HepG2GRWD1
chr12122985181122985242-CDS,intron-Distal,intron-Proximal3.556584.48818HepG2GRWD1
chr12122966116122966161-CDS,intron-Distal3.173815.75243K562ZNF622
chr12122958719122958780-CDS,intron-Distal4.908276.37031K562RBM15
chr12122962419122962487-CDS,intron-Distal,intron-Proximal3.878117.05173K562ZNF622
chr12122966167122966213-CDS,intron-Distal,intron-Proximal3.725823.43526K562GRWD1
chr12122958204122958242-CDS,intron-Distal4.115794.15208K562RBM15
chr12122985145122985189-CDS,intron-Distal,intron-Proximal3.090078.13930K562AQR
chr12122958293122958351-CDS,intron-Distal3.105953.55138K562ZNF622
chr12122966485122966527-CDS,intron-Distal,intron-Proximal4.2544110.07582K562ZNF622
chr12122966161122966214-CDS,intron-Distal,intron-Proximal5.6702911.16146HepG2BCLAF1
chr12122966163122966213-CDS,intron-Distal,intron-Proximal3.277703.79741HepG2GRWD1
chr12122966527122966622-CDS,intron-Distal,intron-Proximal3.9336313.09306K562ZNF622
chr12122966105122966163-CDS,intron-Distal3.285014.45064HepG2GRWD1
chr12122966421122966495-CDS,intron-Distal,intron-Proximal4.6793113.24177K562AQR
chr12122958346122958398-CDS,intron-Distal,intron-Proximal3.883116.28172K562RBM15
chr12122966483122966520-CDS,intron-Distal,intron-Proximal3.974613.88696K562GRWD1
chr12122977071122977154-intron-Distal4.676915.82778K562PRPF8
chr12122967659122967778-intron-Distal,intron-Proximal3.496228.04002K562KHSRP
chr12122967084122967175-intron-Distal,intron-Proximal5.290585.17615K562AQR
chr12122974027122974092-intron-Distal,intron-Proximal5.690819.13109K562QKI
chr12122963933122964007-intron-Distal3.542465.24083K562U2AF2
chr12122969401122969547-intron-Distal4.333337.98725K562TRA2A
chr12122972947122973033-intron-Distal3.292585.76512HepG2ILF3
chr12122974114122974174-intron-Distal4.180134.07948K562RBFOX2
chr12122974018122974064-intron-Distal,intron-Proximal4.075184.22551K562SF3B4
chr12122966410122966461-intron-Distal,intron-Proximal4.308093.64144K562EFTUD2
chr12122977213122977262-intron-Distal,intron-Proximal4.831155.65342K562AQR
chr12122963905122964015-intron-Distal4.3987714.20290HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZCCHC8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZCCHC8 is not available on ENCORE database.

  • 64 RBPs can affect the levels of ZCCHC8.  








The Knockdown/knockout RNA-Seq assay for ZCCHC8 is not available on ENCORE database.





64 RBPs can affect the gene expression of ZCCHC8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZCCHC8ENSG00000033030.9504.50900662.38990-0.392803.742803.05630HepG2ACO1
ZCCHC8ENSG00000033030.9636.628401005.21300-0.659005.129904.43370HepG2AKAP1
ZCCHC8ENSG00000033030.9743.79450967.59040-0.379502.460301.80610HepG2AUH
ZCCHC8ENSG00000033030.91048.09390790.221800.407302.911402.11810HepG2CIRBP
ZCCHC8ENSG00000033030.9538.75810804.23070-0.578003.042302.23670HepG2CNOT7
ZCCHC8ENSG00000033030.9920.22450715.285200.363403.108501.93890HepG2CPSF7
ZCCHC8ENSG00000033030.9399.20260549.64390-0.461403.733202.54750HepG2YBX3
ZCCHC8ENSG00000033030.9816.90680531.030300.621306.438405.05100HepG2DDX24
ZCCHC8ENSG00000033030.9981.37050633.755300.630809.607808.50180HepG2DKC1
ZCCHC8ENSG00000033030.91155.95370968.967400.254502.277401.50520HepG2EIF4G1
ZCCHC8ENSG00000033030.9968.93770752.271800.365002.848201.74060HepG2ESF1
ZCCHC8ENSG00000033030.91488.452901111.045900.421804.071703.36720HepG2ETF1
ZCCHC8ENSG00000033030.9514.03040745.44920-0.536303.003101.84180HepG2FUS
ZCCHC8ENSG00000033030.9689.81420886.53920-0.362001.901001.32280HepG2FXR1
ZCCHC8ENSG00000033030.9767.23240544.888400.493603.857303.11290HepG2HNRNPA1
ZCCHC8ENSG00000033030.9736.97340902.63930-0.292502.467501.57810HepG2HNRNPA2B1
ZCCHC8ENSG00000033030.9713.90190596.232000.259802.027401.40680HepG2HNRNPF
ZCCHC8ENSG00000033030.9662.67370832.57290-0.329301.926201.33780HepG2HNRNPK
ZCCHC8ENSG00000033030.9742.73760894.67940-0.268502.582901.93050HepG2HNRNPL
ZCCHC8ENSG00000033030.91004.70270651.775700.624205.791504.91470HepG2HNRNPLL
ZCCHC8ENSG00000033030.9817.23750587.121800.477003.099802.33650HepG2IGF2BP1
ZCCHC8ENSG00000033030.9431.42090586.67880-0.443502.898601.73850HepG2LARP7
ZCCHC8ENSG00000033030.9713.30460973.91490-0.449304.723503.72740HepG2NOL12
ZCCHC8ENSG00000033030.9817.44630577.947200.500103.818802.94240HepG2NSUN2
ZCCHC8ENSG00000033030.9832.70430681.132900.289802.312101.59780HepG2PRPF4
ZCCHC8ENSG00000033030.9645.94870864.16770-0.419904.699504.02880HepG2PTBP1
ZCCHC8ENSG00000033030.9642.39840986.90310-0.6194011.3986010.36650HepG2PUM1
ZCCHC8ENSG00000033030.9840.84960674.702700.317503.070402.42950HepG2PUS1
ZCCHC8ENSG00000033030.9820.12780961.76900-0.229801.785201.33050HepG2NELFE
ZCCHC8ENSG00000033030.9837.11220642.235100.382202.803502.11640HepG2RPLP0
ZCCHC8ENSG00000033030.9272.33440464.76470-0.771106.687405.77800HepG2RPS19
ZCCHC8ENSG00000033030.9418.95300536.17830-0.355902.733202.09140HepG2SAFB2
ZCCHC8ENSG00000033030.91440.60860969.437700.571403.830803.03150HepG2SF3A3
ZCCHC8ENSG00000033030.9894.14210645.110600.470903.737202.92900HepG2SF3B1
ZCCHC8ENSG00000033030.9691.14830899.78200-0.380603.980003.29250HepG2SF3B4
ZCCHC8ENSG00000033030.9483.11330625.27870-0.372103.510502.79990HepG2SMN1
ZCCHC8ENSG00000033030.91308.684201048.778000.319302.089901.63510HepG2SRFBP1
ZCCHC8ENSG00000033030.9781.45820939.14830-0.265202.339601.89520HepG2SRSF1
ZCCHC8ENSG00000033030.9717.72730917.92980-0.354903.538802.84650HepG2SRSF5
ZCCHC8ENSG00000033030.91344.85310910.508600.562605.836905.14480HepG2SSB
ZCCHC8ENSG00000033030.91285.53640750.144700.7770010.029508.81830HepG2U2AF1
ZCCHC8ENSG00000033030.9643.16430859.74140-0.418704.382503.53720HepG2UPF1
ZCCHC8ENSG00000033030.9857.12680672.217600.350503.623202.87150HepG2ZC3H8
ZCCHC8ENSG00000033030.91132.03880945.553200.259602.880102.32480HepG2ZNF622
ZCCHC8ENSG00000033030.91436.532101783.79990-0.312404.236603.56060K562AGGF1
ZCCHC8ENSG00000033030.91462.419001856.08920-0.343903.135802.43940K562AKAP8L
ZCCHC8ENSG00000033030.93297.926101659.560100.9907020.9184019.47900K562AQR
ZCCHC8ENSG00000033030.91613.272501947.41730-0.271602.976902.03110K562ATP5C1
ZCCHC8ENSG00000033030.9757.22540970.30560-0.357703.644202.53560K562BCLAF1
ZCCHC8ENSG00000033030.93034.402302501.390800.278603.292002.22720K562CELF1
ZCCHC8ENSG00000033030.9556.48830795.91180-0.516305.031603.56780K562DDX3X
ZCCHC8ENSG00000033030.91107.81170804.910800.460703.858102.76550K562EFTUD2
ZCCHC8ENSG00000033030.91646.654401386.320100.248202.535901.84180K562EIF2S2
ZCCHC8ENSG00000033030.9796.126801061.45600-0.415004.467003.46640K562EIF3G
ZCCHC8ENSG00000033030.91055.64330831.502100.344202.482301.70530K562EIF4A3
ZCCHC8ENSG00000033030.91290.66990878.535700.554803.933003.05480K562G3BP2
ZCCHC8ENSG00000033030.91408.393901175.371100.260802.343701.30160K562GLRX3
ZCCHC8ENSG00000033030.92455.245801937.845900.341302.971002.14780K562HSPD1
ZCCHC8ENSG00000033030.92565.810702090.593600.295403.511701.90320K562PNPT1
ZCCHC8ENSG00000033030.91407.23270783.271400.8452011.469009.93400K562PRPF8
ZCCHC8ENSG00000033030.92784.765602360.975200.238102.375401.39280K562PUM1
ZCCHC8ENSG00000033030.91394.234901840.98520-0.401003.995403.36050K562PUS1
ZCCHC8ENSG00000033030.91409.031001793.55220-0.348104.199003.48460K562RBM15
ZCCHC8ENSG00000033030.9901.744701131.98560-0.328102.622101.93160K562SRSF1
ZCCHC8ENSG00000033030.91347.238401029.229800.388304.003003.01110K562SYNCRIP
ZCCHC8ENSG00000033030.91243.95900916.005900.441403.953602.00460K562TBRG4
ZCCHC8ENSG00000033030.91072.77150879.727900.286102.293901.56380K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZCCHC8 is not available on ENCORE database.





21 RBPs can affect the splicing of ZCCHC8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZCCHC8ENSG00000033030.9chr12-122967825122968110122967181122967242122973932122974010-0.087000.004610.09878excludedK562AKAP8L
SEZCCHC8ENSG00000033030.9chr12-122967181122967242122966537122966634122973932122974010-0.197000.006140.06245excludedHepG2U2AF2
SEZCCHC8ENSG00000033030.9chr12-122975008122975114122973932122974010122977261122977336-0.243000.000000.00000excludedK562AQR
SEZCCHC8ENSG00000033030.9chr12-122967825122968110122967181122967242122973932122974002-0.185000.000050.00091excludedK562AQR
SEZCCHC8ENSG00000033030.9chr12-122967181122967242122966537122966634122967825122968110-0.086000.000180.00405excludedK562PUS1
SEZCCHC8ENSG00000033030.9chr12-122975008122975114122973932122974010122977261122977336-0.115000.006580.07655excludedK562PUS1
SEZCCHC8ENSG00000033030.9chr12-122967825122968110122967181122967242122973932122974010-0.178000.000100.00561excludedK562UTP18
SEZCCHC8ENSG00000033030.9chr12-122967181122967242122966537122966634122967825122968110-0.145000.000100.00286excludedK562U2AF2
SEZCCHC8ENSG00000033030.9chr12-122967825122968110122967181122967242122973932122974010-0.154000.000150.00606excludedK562RBM15
SEZCCHC8ENSG00000033030.9chr12-122967181122967242122966537122966634122973932122974010-0.134000.001030.02845excludedK562AGGF1
SEZCCHC8ENSG00000033030.9chr12-122975008122975114122973932122974010122977261122977336-0.134000.001560.03912excludedK562AGGF1
A3SSZCCHC8ENSG00000033030.9chr12-1229660681229662481229660681229662111229664911229666340.083000.000000.00000longerK562AQR
A3SSZCCHC8ENSG00000033030.9chr12-1229680061229681851229680061229681101229739321229740020.148000.000000.00004longerK562AQR
A3SSZCCHC8ENSG00000033030.9chr12-1229772611229774281229772611229773361229845191229847950.480000.000090.00083longerK562AQR
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.245000.000660.01284includedK562SF3B4
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.237000.001890.03723includedHepG2PCBP2
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.134000.005690.03466includedK562PUS1
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.193000.006210.05927includedHepG2SF3A3
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.250000.000000.00000includedK562PRPF8
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.169000.000970.03392includedHepG2MATR3
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.155000.003650.03906includedHepG2QKI
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.160000.000860.00990includedK562AKAP8L
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.141000.006480.05514includedHepG2TAF15
RIZCCHC8ENSG00000033030.9chr12-122967825122968110122967825122967891122968006122968110-0.168000.011510.08821excludedHepG2U2AF1
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.158000.000620.00855includedK562RBM15
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.477000.000000.00000includedHepG2TIAL1
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.171000.001000.01427includedHepG2NCBP2
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.444000.000000.00000includedHepG2SF3B4
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.365000.000000.00003includedHepG2FUBP3
RIZCCHC8ENSG00000033030.9chr12-122967825122968110122967825122967891122968006122968110-0.157000.009450.07308excludedHepG2RBM22
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.174000.002250.02615includedHepG2HNRNPK
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.185000.000020.00042includedK562EFTUD2
RIZCCHC8ENSG00000033030.9chr12-1229678251229681101229678251229678911229680061229681100.106000.001330.00874includedK562AQR
MXEZCCHC8ENSG00000033030.9chr12-1229671811229672421229678251229681101229665371229666341229739321229740100.156000.006380.075751includedK562U2AF1
MXEZCCHC8ENSG00000033030.9chr12-1229671811229672421229678251229678911229664911229666341229739321229740100.076000.004960.063731includedK562U2AF1
MXEZCCHC8ENSG00000033030.9chr12-1229671811229672421229678251229678911229664911229666341229739321229740100.077000.000510.012151includedK562PUS1
MXEZCCHC8ENSG00000033030.9chr12-1229750081229751141229772611229773361229739321229740101229833731229838720.161000.000530.005201includedK562AQR
MXEZCCHC8ENSG00000033030.9chr12-1229750081229751141229772611229773601229739321229740101229833731229851420.281000.000000.000001includedK562AQR
MXEZCCHC8ENSG00000033030.9chr12-122973932122974010122977261122977336122967181122967242122983373122983414-0.131000.002550.020402includedK562AQR
MXEZCCHC8ENSG00000033030.9chr12-1229671811229672421229678251229681101229665371229666341229739321229740100.159000.002410.032151includedK562U2AF2
MXEZCCHC8ENSG00000033030.9chr12-1229671811229672421229678251229678911229664911229666341229739321229740100.133000.000030.000911includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZCCHC8 is not avaliable on ENCORE database.