HNRNPF

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HNRNPF	ENSG00000169813.16	144.13	218.16	181.14	ENCSR000AEF
HepG2	HNRNPF	ENSG00000169813.16	250.01	217.10	233.56	ENCSR985KAT
K562	HNRNPF	ENSG00000169813.16	333.32	302.40	317.86	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Controls	Method	Note
knockdown followed by RNA-seq	HNRNPF-BGKLV21-K562	ENCSR392HSJ	HNRNPF	K562	Released	ENCSR572FFX	shRNA	KD% = 77.4,79.4
knockdown followed by RNA-seq	HNRNPF-BGHLV20-HepG2	ENCSR693MZJ	HNRNPF	HepG2	Released	ENCSR305XWT	shRNA	KD% = 78.9,58.1
knockdown followed by RNA-seq	HNRNPF-BGKcLV02-K562	ENCSR380RRP	HNRNPF	K562	Released	ENCSR163JUC	CRISPR	KD% = 73.3,74.4
knockdown followed by RNA-seq	HNRNPF-BGHcLV03-HepG2	ENCSR599NNK	HNRNPF	HepG2	Released	ENCSR105NML	CRISPR	KD% = 82.6,82.4
RNA Bind-n-Seq	RBNS: HNRNPF	ENCSR376SUZ	HNRNPF	cell-free sample	Released

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
HNRNPF	ENCAB386GVG	GTX114476	40135				BGHLV20-35, Released, ENCODE3	BGKLV21-21, Released, ENCODE3

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
HNRNPF	K562	shRNA	ENCSR392HSJ	ENCSR572FFX	HNRNPF_BGKLV21_21_17569,HNRNPF_BGKLV21_22_17570	non-target_BGKLV21_1,non-target_BGKLV21_2	77.4,79.4	Released	ENCODE3
HNRNPF	HepG2	shRNA	ENCSR693MZJ	ENCSR305XWT	HNRNPF-BGHLV20-35_17724,HNRNPF-BGHLV20-36_17725	non-target-BGHLV20-1_17706,non-target-BGHLV20-2_17707	78.9,58.1	Released	ENCODE3
HNRNPF	K562	CRISPR	ENCSR380RRP	ENCSR163JUC	HNRNPF_BGKcLV02-9,HNRNPF_BGKcLV02-10	NT_BGKcLV02-1,NT_BGKcLV02-2	73.3,74.4	Released	ENCODE3
HNRNPF	HepG2	CRISPR	ENCSR599NNK	ENCSR105NML	HNRNPF_BGHcLV03-7,HNRNPF_BGHcLV03-8	NT_BGHcLV03-1,NT_BGHcLV03-2	82.6,82.4	Released	ENCODE3
HNRNPF	293T	shRNA			BG293LV05-5,BG293LV05-6	BG293LV05-1,BG293LV05-2		NotSatisfied	ENCORE2
HNRNPF	293T	shRNA			HNRNPF-BG293LV05-7,HNRNPF-BG293LV05-8	NT-BG293LV05-1,NT-BG293LV05-2	,	Submitting	ENCORE2
HNRNPF	293T	shRNA			HNRNPF-BG293LV06-55,HNRNPF-BG293LV06-56	NT-BG293LV06-1,NT-BG293LV06-2	,	Sequenced	ENCORE2

GeneName	gene_aliases	Status	Project	Note
HNRNPF	HNRNPF		Released	ENCODE3

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HNRNPF is not avaliable on ENCORE database.

The binding motifs of HNRNPF

Proteins bound to RNA

HNRNPF RNA is bound by 59 proteins.

eCLIP assay for HNRNPF is not avaliable on ENCORE database.

59 proteins are bound to HNRNPF RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	43882025	43882051	-	3'-UTR,intron-Distal	4.41850	9.24631	K562	IGF2BP2
chr10	43890077	43890083	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.94537	10.92738	K562	YBX3
chr10	43890083	43890096	-	3'-UTR,5'-UTR,intron-Distal	3.75827	18.78278	K562	YBX3
chr10	43890034	43890125	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.95685	12.81328	HepG2	PRPF8
chr10	43890111	43890126	-	3'-UTR,5'-UTR,intron-Distal	3.19927	18.07613	K562	YBX3
chr10	43891937	43892014	-	3'-UTR,5'-UTR,intron-Distal	3.12358	9.85827	K562	FMR1
chr10	43891970	43892029	-	3'-UTR,5'-UTR,intron-Distal	3.24410	13.15728	K562	YBX3
chr10	43890081	43890136	-	3'-UTR,5'-UTR,intron-Distal	3.47086	4.19369	HepG2	DDX3X
chr10	43891931	43891979	-	3'-UTR,5'-UTR,intron-Distal	3.46052	10.36887	K562	RPS3
chr10	43891802	43891918	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.93657	6.57821	HepG2	AQR
chr10	43891920	43891946	-	3'-UTR,5'-UTR,intron-Distal	3.55430	24.58418	K562	DDX3X
chr10	43891902	43891920	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.09529	11.00176	K562	DDX3X
chr10	43883326	43883342	-	3'-UTR,CDS,intron-Distal	3.16435	11.65285	K562	YBX3
chr10	43883246	43883339	-	3'-UTR,CDS,intron-Distal	3.23781	14.08096	K562	FMR1
chr10	43881531	43881562	-	3'-UTR,intron-Distal	4.34001	8.90657	K562	TIA1
chr10	43881610	43881637	-	3'-UTR,intron-Distal	5.29406	19.02297	K562	TIA1
chr10	43891946	43891973	-	3'-UTR,5'-UTR,intron-Distal	3.89278	34.91006	K562	DDX3X
chr10	43881624	43881674	-	3'-UTR,intron-Distal	3.56921	6.75417	K562	IGF2BP1
chr10	43890089	43890132	-	3'-UTR,5'-UTR,intron-Distal	4.12703	6.80577	K562	METAP2
chr10	43892018	43892039	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.38270	19.38393	K562	DDX3X
chr10	43891973	43891994	-	3'-UTR,5'-UTR,intron-Distal	3.75973	18.09540	K562	DDX3X
chr10	43883373	43883384	-	3'-UTR,intron-Distal	4.06933	14.65827	K562	YBX3
chr10	43881510	43881557	-	3'-UTR,intron-Distal	3.83873	7.84240	HepG2	SUB1
chr10	43892027	43892088	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.45659	19.88223	HepG2	SF3A3
chr10	43881613	43881671	-	3'-UTR,intron-Distal	4.75667	4.05830	HepG2	TIA1
chr10	43891985	43892030	-	3'-UTR,5'-UTR,intron-Distal	4.07195	19.58341	HepG2	DDX3X
chr10	43883363	43883373	-	3'-UTR,intron-Distal	3.81734	8.68789	K562	YBX3
chr10	43891856	43891929	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.86365	10.32587	HepG2	PRPF8
chr10	43891925	43891985	-	3'-UTR,5'-UTR,intron-Distal	4.53839	25.33875	HepG2	DDX3X
chr10	43881501	43881592	-	3'-UTR,intron-Distal	3.89127	21.82594	HepG2	FUBP3
chr10	43883342	43883363	-	3'-UTR,intron-Distal	3.66847	12.66700	K562	YBX3
chr10	43891948	43891970	-	3'-UTR,5'-UTR,intron-Distal	3.02216	8.52352	K562	YBX3
chr10	43881965	43882017	-	3'-UTR,intron-Distal	3.17351	11.19180	K562	IGF2BP2
chr10	43890096	43890111	-	3'-UTR,5'-UTR,intron-Distal	3.38310	20.64224	K562	YBX3
chr10	43891902	43891920	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.28556	5.01245	HepG2	DDX3X
chr10	43881637	43881666	-	3'-UTR,intron-Distal	5.07766	15.37358	K562	TIA1
chr10	43881635	43881672	-	3'-UTR,intron-Distal	3.39259	5.66333	HepG2	TIAL1
chr10	43892103	43892172	-	5'-UTR,intron-Distal,intron-Proximal	4.27770	16.74963	HepG2	DDX59
chr10	43892104	43892141	-	5'-UTR,intron-Distal,intron-Proximal	4.01943	4.84268	K562	SF3B4
chr10	43892109	43892221	-	5'-UTR,intron-Distal,intron-Proximal	3.81546	5.78448	HepG2	SF3B4
chr10	43904509	43904547	-	5'-UTR,intron-Distal	3.84831	5.55220	K562	CSTF2T
chr10	43903183	43903223	-	5'-UTR,intron-Distal	3.09927	16.78241	K562	DDX3X
chr10	43892060	43892101	-	5'-UTR,intron-Distal,intron-Proximal	3.68237	5.19548	K562	IGF2BP2
chr10	43903163	43903169	-	5'-UTR,intron-Distal	3.62646	14.94047	K562	DDX3X
chr10	43892707	43892746	-	5'-UTR,intron-Distal,intron-Proximal	4.34645	6.20526	HepG2	DDX59
chr10	43892247	43892304	-	5'-UTR,intron-Distal,intron-Proximal	3.94235	5.62912	HepG2	CSTF2T
chr10	43892108	43892160	-	5'-UTR,intron-Distal,intron-Proximal	3.71499	11.54576	K562	NONO
chr10	43892248	43892287	-	5'-UTR,intron-Distal,intron-Proximal	4.60238	4.96496	K562	NONO
chr10	43892269	43892355	-	5'-UTR,intron-Distal,intron-Proximal	5.33170	9.00303	HepG2	PCBP2
chr10	43892115	43892136	-	5'-UTR,intron-Distal,intron-Proximal	4.31028	3.53770	HepG2	DDX3X
chr10	43904433	43904551	-	5'-UTR,intron-Distal	3.48580	4.59965	HepG2	PRPF4
chr10	43904531	43904561	-	5'-UTR,intron-Distal	3.62138	5.42526	K562	IGF2BP2
chr10	43903261	43903298	-	5'-UTR,intron-Distal,intron-Proximal	4.21499	5.85821	K562	NONO
chr10	43892229	43892317	-	5'-UTR,intron-Distal,intron-Proximal	4.44437	4.19401	K562	HNRNPK
chr10	43892245	43892415	-	5'-UTR,intron-Distal,intron-Proximal	5.05153	21.86123	HepG2	HNRNPK
chr10	43892691	43892787	-	5'-UTR,intron-Distal,intron-Proximal	3.95118	12.22659	K562	NONO
chr10	43903169	43903183	-	5'-UTR,intron-Distal	3.82322	19.41525	K562	DDX3X
chr10	43892788	43892878	-	5'-UTR,intron-Distal,intron-Proximal	3.54212	8.46887	K562	NONO
chr10	43892237	43892328	-	5'-UTR,intron-Distal,intron-Proximal	4.40648	7.75987	HepG2	XRN2
chr10	43892050	43892096	-	5'-UTR,intron-Distal,intron-Proximal	3.18670	12.07553	HepG2	DDX59
chr10	43892240	43892279	-	5'-UTR,intron-Distal,intron-Proximal	4.27007	3.57329	K562	XRN2
chr10	43892190	43892196	-	5'-UTR,intron-Distal	3.91313	3.30664	K562	NONO
chr10	43892097	43892184	-	5'-UTR,intron-Distal,intron-Proximal	3.63152	12.39524	K562	DDX52
chr10	43904539	43904607	-	5'-UTR,intron-Distal	3.25971	4.79866	HepG2	PRPF8
chr10	43892165	43892220	-	5'-UTR,intron-Distal	3.73901	6.14590	HepG2	DDX3X
chr10	43892225	43892351	-	5'-UTR,intron-Distal,intron-Proximal	6.07691	24.33515	HepG2	DDX59
chr10	43882580	43882615	-	CDS,intron-Distal	3.32610	4.18161	HepG2	RBM15
chr10	43883186	43883199	-	CDS,intron-Distal	3.30719	18.62538	K562	YBX3
chr10	43882995	43883065	-	CDS,intron-Distal,intron-Proximal	4.08212	11.57228	HepG2	G3BP1
chr10	43882690	43882734	-	CDS,intron-Distal	4.06481	17.74408	K562	RPS3
chr10	43883171	43883186	-	CDS,intron-Distal	3.31595	20.98318	K562	YBX3
chr10	43882325	43882366	-	CDS,intron-Distal	4.10998	3.02060	K562	LIN28B
chr10	43882368	43882419	-	CDS,intron-Distal	3.80247	9.95299	K562	RBM15
chr10	43882619	43882680	-	CDS,intron-Distal	3.64733	16.58283	K562	FXR2
chr10	43883087	43883177	-	CDS,intron-Distal,intron-Proximal	3.03862	15.73641	K562	PUM2
chr10	43882289	43882328	-	CDS,intron-Distal	4.22330	7.03491	K562	RBM15
chr10	43883009	43883070	-	CDS,intron-Distal,intron-Proximal	3.90946	4.22136	HepG2	RBM15
chr10	43882397	43882479	-	CDS,intron-Distal	3.87607	13.82484	K562	FXR2
chr10	43882611	43882672	-	CDS,intron-Distal	4.57920	9.10244	HepG2	G3BP1
chr10	43882987	43883031	-	CDS,intron-Distal,intron-Proximal	3.61261	10.30177	K562	FXR2
chr10	43883251	43883313	-	CDS,intron-Distal	3.26121	7.88689	HepG2	RPS3
chr10	43883191	43883241	-	CDS,intron-Distal	3.04681	5.48940	K562	RBM15
chr10	43882974	43883073	-	CDS,intron-Distal,intron-Proximal	3.39219	15.76873	K562	FMR1
chr10	43882534	43882590	-	CDS,intron-Distal	5.14645	8.99614	HepG2	RPS3
chr10	43883154	43883195	-	CDS,intron-Distal	3.12612	5.92801	K562	FMR1
chr10	43882289	43882331	-	CDS,intron-Distal	3.37704	4.18161	HepG2	RBM15
chr10	43882367	43882407	-	CDS,intron-Distal	5.08863	7.65959	K562	METAP2
chr10	43882609	43882667	-	CDS,intron-Distal	3.76757	4.31353	HepG2	SLTM
chr10	43882907	43882947	-	CDS,intron-Distal,intron-Proximal	3.45524	7.13696	K562	RBM15
chr10	43882545	43882580	-	CDS,intron-Distal	4.30461	9.67189	K562	RPS3
chr10	43882541	43882579	-	CDS,intron-Distal	4.80663	6.83406	K562	RBM15
chr10	43882997	43883056	-	CDS,intron-Distal,intron-Proximal	3.47230	5.51186	K562	PCBP1
chr10	43882536	43882602	-	CDS,intron-Distal	3.96019	10.07647	HepG2	G3BP1
chr10	43882881	43882973	-	CDS,intron-Distal,intron-Proximal	4.99126	17.28531	K562	LIN28B
chr10	43882614	43882665	-	CDS,intron-Distal	3.34490	11.65906	K562	FMR1
chr10	43882525	43882614	-	CDS,intron-Distal	4.59544	22.71010	K562	FMR1
chr10	43882987	43883075	-	CDS,intron-Distal,intron-Proximal	3.11972	5.39726	K562	ZNF800
chr10	43882662	43882727	-	CDS,intron-Distal	3.65773	9.44798	K562	METAP2
chr10	43883164	43883171	-	CDS,intron-Distal	3.13198	20.00070	K562	YBX3
chr10	43882205	43882239	-	CDS,intron-Distal	4.72107	5.51215	K562	RBM15
chr10	43882890	43882952	-	CDS,intron-Distal,intron-Proximal	3.48738	4.66813	HepG2	RBM15
chr10	43882479	43882619	-	CDS,intron-Distal	4.48682	36.17612	K562	FXR2
chr10	43882707	43882766	-	CDS,intron-Distal	3.29002	8.89915	HepG2	RBM15
chr10	43882672	43882740	-	CDS,intron-Distal	3.24298	11.90763	HepG2	G3BP1
chr10	43882740	43882791	-	CDS,intron-Distal	4.32244	18.28708	HepG2	G3BP1
chr10	43883247	43883311	-	CDS,intron-Distal	3.56924	15.56581	K562	RBM15
chr10	43882334	43882396	-	CDS,intron-Distal	3.33325	14.96321	K562	RPS3
chr10	43882878	43882907	-	CDS,intron-Distal	3.76332	14.15690	K562	RBM15
chr10	43882791	43882881	-	CDS,intron-Distal	3.08505	9.09374	HepG2	G3BP1
chr10	43882419	43882463	-	CDS,intron-Distal	3.94917	9.79344	K562	FMR1
chr10	43882327	43882375	-	CDS,intron-Distal	3.79264	10.43737	K562	FXR2
chr10	43882160	43882201	-	CDS,intron-Distal	3.02524	9.03764	K562	RPS3
chr10	43882523	43882590	-	CDS,intron-Distal	3.11371	7.67013	K562	SND1
chr10	43882548	43882623	-	CDS,intron-Distal	3.54154	10.82288	K562	LIN28B
chr10	43891575	43891622	-	intron-Distal	4.84140	7.09445	K562	NONO
chr10	43903777	43903822	-	intron-Distal	4.36767	9.87868	K562	TIA1
chr10	43888269	43888345	-	intron-Distal	3.73523	4.97523	HepG2	HNRNPM
chr10	43903655	43903709	-	intron-Distal	4.82585	5.22156	HepG2	SFPQ
chr10	43902654	43902711	-	intron-Distal	3.76838	3.79142	K562	AKAP1
chr10	43902825	43902887	-	intron-Distal	4.15358	8.40370	K562	DDX51
chr10	43895033	43895104	-	intron-Distal	3.44585	8.35041	HepG2	HNRNPL
chr10	43903822	43903880	-	intron-Distal	3.22256	8.55463	K562	TIA1
chr10	43892458	43892524	-	intron-Distal	4.65514	17.25820	HepG2	DDX59
chr10	43903845	43903900	-	intron-Distal	4.18561	3.90256	HepG2	PRPF4
chr10	43902607	43902676	-	intron-Distal	3.73082	12.94723	K562	NONO
chr10	43904477	43904516	-	intron-Distal	3.72814	3.84192	K562	DDX52
chr10	43903940	43904009	-	intron-Distal	3.76755	11.13052	HepG2	CSTF2T
chr10	43903657	43903706	-	intron-Distal	3.69138	4.12529	K562	GTF2F1
chr10	43903431	43903472	-	intron-Distal	5.26137	10.62174	K562	TIA1
chr10	43883500	43883560	-	intron-Distal	3.18546	5.88399	K562	KHSRP
chr10	43904030	43904069	-	intron-Distal	4.06570	5.39661	K562	GEMIN5
chr10	43891804	43891854	-	intron-Distal,intron-Proximal	3.84956	5.12645	HepG2	CDC40
chr10	43903930	43903988	-	intron-Distal	3.23622	5.46884	K562	GEMIN5
chr10	43891791	43891847	-	intron-Distal,intron-Proximal	5.58833	14.63553	HepG2	EFTUD2
chr10	43903829	43903895	-	intron-Distal	6.15400	13.69613	K562	NONO
chr10	43903711	43903742	-	intron-Distal	5.30468	9.31104	K562	NONO
chr10	43903657	43903738	-	intron-Distal	3.64079	11.50274	K562	CSTF2T
chr10	43904449	43904499	-	intron-Distal	3.11570	3.96485	K562	AKAP8L
chr10	43892530	43892587	-	intron-Distal	4.34848	8.18170	K562	NONO
chr10	43903647	43903731	-	intron-Distal	3.43120	9.86829	K562	EWSR1
chr10	43902913	43902974	-	intron-Distal	4.01179	10.17572	K562	NONO
chr10	43892542	43892554	-	intron-Distal	3.64139	4.00685	K562	TIA1
chr10	43903943	43903995	-	intron-Distal	3.63123	7.29104	K562	DDX52
chr10	43903834	43903889	-	intron-Distal	4.12991	4.46657	HepG2	FUS
chr10	43903838	43903896	-	intron-Distal	3.67904	10.87746	HepG2	CSTF2T
chr10	43902687	43902764	-	intron-Distal	4.02594	15.00777	HepG2	CSTF2T
chr10	43892387	43892432	-	intron-Distal	4.93345	5.66217	K562	NONO
chr10	43903829	43903887	-	intron-Distal	3.94842	12.20761	K562	EWSR1
chr10	43902911	43902968	-	intron-Distal	4.08112	11.65011	HepG2	CSTF2T
chr10	43892437	43892512	-	intron-Distal	3.34753	8.42355	HepG2	HNRNPK
chr10	43892466	43892513	-	intron-Distal	3.42711	6.99195	K562	NONO
chr10	43902980	43903038	-	intron-Distal	3.47846	18.12667	K562	TIA1
chr10	43902655	43902756	-	intron-Distal	3.36682	4.18167	K562	LSM11
chr10	43891719	43891750	-	intron-Distal	4.37068	3.98553	K562	NONO
chr10	43904471	43904521	-	intron-Distal	5.71880	11.51099	K562	NONO
chr10	43891860	43891898	-	intron-Distal,intron-Proximal	4.16105	17.34791	K562	AQR
chr10	43903408	43903518	-	intron-Distal	3.88970	7.19436	K562	FUS
chr10	43904042	43904085	-	intron-Distal	3.30642	4.77857	K562	AKAP8L
chr10	43902796	43902901	-	intron-Distal	3.17062	8.95731	K562	XRN2
chr10	43903839	43903894	-	intron-Distal	4.07519	4.88931	HepG2	FAM120A
chr10	43883421	43883473	-	intron-Distal	4.97249	6.13339	K562	KHSRP
chr10	43902821	43902917	-	intron-Distal	4.63120	6.73547	K562	FUS
chr10	43903315	43903355	-	intron-Distal,intron-Proximal	3.75897	10.17572	K562	NONO
chr10	43903916	43904022	-	intron-Distal	4.31322	18.93692	K562	CSTF2T
chr10	43903793	43903853	-	intron-Distal	4.20192	6.00400	HepG2	FKBP4
chr10	43903673	43903749	-	intron-Distal	3.29248	5.29877	K562	DDX52
chr10	43903694	43903760	-	intron-Distal	3.02903	4.53006	K562	FUS
chr10	43903399	43903477	-	intron-Distal	4.55105	19.49022	K562	NONO
chr10	43904449	43904478	-	intron-Distal	3.40310	5.70053	K562	GEMIN5
chr10	43903940	43903998	-	intron-Distal	3.75906	4.34492	K562	XRN2
chr10	43891787	43891850	-	intron-Distal,intron-Proximal	5.38086	9.80174	K562	NONO
chr10	43890157	43890201	-	intron-Distal,intron-Proximal	3.73972	6.26407	K562	SF3B4
chr10	43902719	43902757	-	intron-Distal	3.60457	5.57795	K562	DHX30
chr10	43902813	43902871	-	intron-Distal	6.16067	10.05447	K562	DDX52
chr10	43903834	43903891	-	intron-Distal	3.22754	4.63524	K562	LSM11
chr10	43904429	43904485	-	intron-Distal,intron-Proximal	3.27914	4.91491	K562	SLTM
chr10	43902992	43903074	-	intron-Distal	3.90795	11.23499	K562	PHF6
chr10	43903912	43903985	-	intron-Distal	3.76343	4.36344	HepG2	HNRNPUL1
chr10	43902987	43903069	-	intron-Distal	4.35503	22.10821	K562	NONO
chr10	43903917	43904011	-	intron-Distal	3.96540	7.11537	HepG2	PRPF4
chr10	43903949	43904034	-	intron-Distal	5.08997	9.18545	K562	FUS
chr10	43891780	43891875	-	intron-Distal,intron-Proximal	3.80441	12.16607	K562	EFTUD2
chr10	43902676	43902754	-	intron-Distal	5.65230	24.11579	K562	NONO
chr10	43904434	43904487	-	intron-Distal	4.32125	8.66215	HepG2	CSTF2T
chr10	43892524	43892581	-	intron-Distal	5.18343	13.42450	HepG2	DDX59
chr10	43903937	43904010	-	intron-Distal	4.93215	4.59452	HepG2	PCBP2
chr10	43903855	43903889	-	intron-Distal	4.34666	5.51064	K562	DDX52
chr10	43902702	43902765	-	intron-Distal	3.58408	6.23800	K562	XRN2
chr10	43903927	43903985	-	intron-Distal	6.25537	20.35881	K562	NONO
chr10	43902624	43902687	-	intron-Distal	3.56786	9.30094	HepG2	CSTF2T
chr10	43891786	43891841	-	intron-Distal,intron-Proximal	4.95088	5.56495	HepG2	RBM22
chr10	43903659	43903711	-	intron-Distal	6.28572	17.64203	K562	NONO
chr10	43904033	43904084	-	intron-Distal	3.97551	6.94297	K562	DDX51
chr10	43894499	43894597	-	intron-Distal	3.72985	3.35377	HepG2	QKI
chr10	43892479	43892513	-	intron-Distal	4.62141	4.57427	HepG2	PCBP2
chr10	43892461	43892518	-	intron-Distal	4.60816	3.91009	K562	HNRNPK
chr10	43902917	43902959	-	intron-Distal	3.77497	5.02437	HepG2	XRN2
chr10	43892530	43892591	-	intron-Distal	4.54886	6.13079	HepG2	HNRNPK
chr10	43894974	43895037	-	intron-Distal	3.03325	5.04047	K562	HNRNPL
chr10	43903929	43904010	-	intron-Distal	5.87477	14.27215	K562	GTF2F1
chr10	43895111	43895188	-	intron-Distal	3.01233	9.73320	HepG2	HNRNPL
chr10	43903425	43903481	-	intron-Distal	3.38051	5.89561	K562	EWSR1
chr10	43903451	43903476	-	intron-Distal	3.10593	6.79749	HepG2	CSTF2T
chr10	43903038	43903062	-	intron-Distal	6.37814	23.64605	K562	TIA1
chr10	43904031	43904089	-	intron-Distal	3.37444	3.47229	K562	GTF2F1
chr10	43895068	43895185	-	intron-Distal	3.86863	10.23588	K562	PTBP1
chr10	43903926	43903982	-	intron-Distal	5.14198	7.77096	HepG2	SFPQ
chr10	43902678	43902757	-	intron-Distal	3.76109	6.92611	K562	EWSR1
chr10	43903936	43903998	-	intron-Distal	3.03652	4.33751	HepG2	GTF2F1
chr10	43902796	43902888	-	intron-Distal	5.09807	21.37154	K562	NONO
chr10	43902671	43902774	-	intron-Distal	4.09318	9.51668	K562	DDX52
chr10	43900553	43900604	-	intron-Distal	4.18109	3.72398	HepG2	SFPQ
chr10	43902811	43902879	-	intron-Distal	3.32094	5.06229	K562	PHF6
chr10	43891795	43891884	-	intron-Distal,intron-Proximal	3.33282	3.90173	HepG2	RBM5
chr10	43902626	43902695	-	intron-Distal	3.06059	5.31577	HepG2	NKRF
chr10	43891228	43891291	-	intron-Distal	4.03165	7.48999	K562	NONO
chr10	43903930	43903995	-	intron-Distal	4.06782	14.83362	K562	EWSR1
chr10	43902680	43902770	-	intron-Distal	4.23321	5.80675	K562	EIF4G2
chr10	43891847	43891903	-	intron-Distal,intron-Proximal	4.06959	8.51983	HepG2	EFTUD2
chr10	43903786	43903824	-	intron-Distal	4.29160	3.94554	K562	XRN2
chr10	43890027	43890077	-	intron-Distal,intron-Proximal	4.47385	8.01338	K562	AQR
chr10	43883473	43883500	-	intron-Distal	4.89656	6.58261	K562	KHSRP
chr10	43891898	43891903	-	intron-Distal,intron-Proximal	4.04941	12.01630	K562	AQR
chr10	43904034	43904070	-	intron-Distal	4.04206	4.37227	K562	FUS
chr10	43904040	43904076	-	intron-Distal	3.98097	6.29987	K562	EWSR1
chr10	43904045	43904075	-	intron-Distal	4.24677	7.72512	K562	NONO
chr10	43902991	43903069	-	intron-Distal	3.33678	9.82197	K562	EWSR1
chr10	43903609	43903647	-	intron-Distal	4.37793	8.40323	K562	NONO
chr10	43903938	43904011	-	intron-Distal	3.18974	6.58568	HepG2	FAM120A
chr10	43891794	43891849	-	intron-Distal,intron-Proximal	3.00203	8.26398	HepG2	BUD13
chr10	43902791	43902857	-	intron-Distal	3.38203	8.11239	HepG2	XRN2
chr10	43903609	43903655	-	intron-Distal	3.83489	3.60936	K562	FUS
chr10	43903823	43903894	-	intron-Distal	3.32629	4.85257	K562	FUS
chr10	43891806	43891858	-	intron-Distal,intron-Proximal	4.04985	10.58560	K562	AQR
chr10	43902851	43902883	-	intron-Distal	4.86876	6.58558	K562	DHX30
chr10	43903926	43903976	-	intron-Distal	3.84219	3.35727	HepG2	FUS
chr10	43904424	43904502	-	intron-Distal,intron-Proximal	3.67576	5.25366	HepG2	FAM120A
chr10	43904022	43904085	-	intron-Distal	4.20539	4.55101	HepG2	PRPF4
chr10	43903677	43903751	-	intron-Distal	3.47889	7.47307	K562	DDX51
chr10	43903677	43903731	-	intron-Distal	3.43320	5.42289	K562	SLTM
chr10	43902802	43902911	-	intron-Distal	3.33575	15.59962	HepG2	CSTF2T
chr10	43890563	43890627	-	intron-Distal	3.54574	3.59783	HepG2	HNRNPK
chr10	43903676	43903740	-	intron-Distal	3.32329	9.77547	HepG2	CSTF2T
chr10	43903928	43904004	-	intron-Distal	3.47248	7.64306	K562	DROSHA
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for HNRNPF is not avaliable on ENCORE database.

Diffrential Expression

8,217 differentially expressed genes after Knockdown/Knockout HNRNPF protein.

102 RBPs can affect the levels of HNRNPF.

8,217 differentially expressed genes after Knockdown/Knockout HNRNPF protein :

Only display 100 entries as example. Please click "View All" button to see all 8,217 entries.

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DPM1	ENSG00000000419.8	1397.59290	1883.87870	-0.43080	2.35020	1.68530	HepG2	HNRNPF
C1orf112	ENSG00000000460.12	181.21580	300.39870	-0.72920	5.69930	4.71570	HepG2	HNRNPF
FUCA2	ENSG00000001036.9	2225.33510	3698.19840	-0.73280	24.19580	22.37020	HepG2	HNRNPF
NFYA	ENSG00000001167.10	1119.03390	1691.44280	-0.59600	11.86250	10.51870	HepG2	HNRNPF
LAS1L	ENSG00000001497.12	693.54250	869.54150	-0.32630	2.69780	1.98910	HepG2	HNRNPF
SEMA3F	ENSG00000001617.7	756.61160	619.78310	0.28770	2.45940	1.78060	HepG2	HNRNPF
CYP51A1	ENSG00000001630.11	2935.96790	2139.78370	0.45630	4.52860	3.63710	HepG2	HNRNPF
CD99	ENSG00000002586.13	3221.15400	2675.18970	0.26780	4.00930	3.16200	HepG2	HNRNPF
LASP1	ENSG00000002834.13	8165.57450	9407.94960	-0.20430	2.87510	2.14560	HepG2	HNRNPF
M6PR	ENSG00000003056.3	1913.80090	2946.82190	-0.62270	17.18290	15.59120	HepG2	HNRNPF
CYP26B1	ENSG00000003137.4	7.96570	25.69790	-1.68980	2.50980	1.82570	HepG2	HNRNPF
DBNDD1	ENSG00000003249.9	1615.19080	1372.41450	0.23490	2.50640	1.82270	HepG2	HNRNPF
CFLAR	ENSG00000003402.15	2295.97040	1835.17800	0.32310	4.77290	3.86320	HepG2	HNRNPF
TFPI	ENSG00000003436.10	15327.97380	8253.04950	0.89310	43.11060	40.91640	HepG2	HNRNPF
SLC7A2	ENSG00000003989.12	4979.97510	2815.43490	0.82270	17.83310	16.21990	HepG2	HNRNPF
PLXND1	ENSG00000004399.8	2424.45910	2857.81410	-0.23720	3.10790	2.35060	HepG2	HNRNPF
AK2	ENSG00000004455.12	2474.76070	3005.17490	-0.28020	4.21800	3.35290	HepG2	HNRNPF
FKBP4	ENSG00000004478.5	1618.40130	2246.13540	-0.47290	9.19690	7.98780	HepG2	HNRNPF
KDM1A	ENSG00000004487.11	2644.96140	3729.37480	-0.49570	12.02640	10.67390	HepG2	HNRNPF
RECQL	ENSG00000004700.11	419.89730	830.87220	-0.98460	18.90410	17.25100	HepG2	HNRNPF
ARHGAP33	ENSG00000004777.14	213.65580	119.49410	0.83820	2.97420	2.23250	HepG2	HNRNPF
SLC25A13	ENSG00000004864.9	1243.13910	1493.87340	-0.26510	2.89790	2.16530	HepG2	HNRNPF
CDC27	ENSG00000004897.7	2450.23270	3306.37100	-0.43230	7.87210	6.74090	HepG2	HNRNPF
HCCS	ENSG00000004961.10	348.60090	455.06730	-0.38450	2.53710	1.84940	HepG2	HNRNPF
UPF1	ENSG00000005007.8	2536.06790	1818.56210	0.47970	9.50890	8.27840	HepG2	HNRNPF
SKAP2	ENSG00000005020.8	434.79600	705.47810	-0.69830	9.01120	7.81250	HepG2	HNRNPF
DHX33	ENSG00000005100.8	1105.44610	1771.21020	-0.68010	16.03760	14.49970	HepG2	HNRNPF
LIG3	ENSG00000005156.7	823.15530	1125.34640	-0.45110	6.04540	5.04020	HepG2	HNRNPF
RPAP3	ENSG00000005175.5	540.87150	734.08940	-0.44070	4.12930	3.27180	HepG2	HNRNPF
ACSM3	ENSG00000005187.7	1532.38630	622.08190	1.30050	11.94470	10.59700	HepG2	HNRNPF
CIAPIN1	ENSG00000005194.10	1069.69740	1301.71240	-0.28320	3.06690	2.31460	HepG2	HNRNPF
SPPL2B	ENSG00000005206.12	504.83300	336.88020	0.58350	5.69360	4.71040	HepG2	HNRNPF
ABCB4	ENSG00000005471.11	679.90330	509.53950	0.41600	4.10240	3.24690	HepG2	HNRNPF
RHBDD2	ENSG00000005486.12	964.56820	634.56410	0.60400	9.30350	8.08590	HepG2	HNRNPF
ZNF195	ENSG00000005801.12	489.38290	758.92850	-0.63300	7.92230	6.78720	HepG2	HNRNPF
MYCBP2	ENSG00000005810.13	1341.36340	1632.61390	-0.28350	3.36140	2.57690	HepG2	HNRNPF
ITGAL	ENSG00000005844.13	91.13250	23.16500	1.97590	5.21590	4.26970	HepG2	HNRNPF
PDK2	ENSG00000005882.7	712.17740	534.91130	0.41280	3.97060	3.12700	HepG2	HNRNPF
ITGA3	ENSG00000005884.13	86.24890	452.04290	-2.38990	9.23290	8.02120	HepG2	HNRNPF
ZFX	ENSG00000005889.11	1362.30230	594.95730	1.19510	36.54460	34.44910	HepG2	HNRNPF
ASB4	ENSG00000005981.8	84.34910	279.95400	-1.73070	19.83680	18.15720	HepG2	HNRNPF
GDE1	ENSG00000006007.7	1880.65060	2249.43480	-0.25830	3.13730	2.37740	HepG2	HNRNPF
CRLF1	ENSG00000006016.6	2524.39850	4367.14760	-0.79080	30.66370	28.69640	HepG2	HNRNPF
OSBPL7	ENSG00000006025.7	325.79730	248.64680	0.38980	1.93610	1.32960	HepG2	HNRNPF
YBX2	ENSG00000006047.8	25.07010	10.37320	1.27300	1.94530	1.33720	HepG2	HNRNPF
CX3CL1	ENSG00000006210.6	4318.63220	2241.45810	0.94600	34.78660	32.72530	HepG2	HNRNPF
SPATA20	ENSG00000006282.15	1597.69380	1942.85880	-0.28220	3.49490	2.69620	HepG2	HNRNPF
MAP3K9	ENSG00000006432.11	560.41770	690.30000	-0.30070	2.29510	1.63780	HepG2	HNRNPF
BAIAP2L1	ENSG00000006453.9	1008.51170	1193.33370	-0.24280	1.97220	1.35970	HepG2	HNRNPF
AGK	ENSG00000006530.11	611.27530	825.34720	-0.43320	4.67050	3.76950	HepG2	HNRNPF
PHTF2	ENSG00000006576.12	256.58280	396.68990	-0.62860	5.02550	4.09510	HepG2	HNRNPF
GGCT	ENSG00000006625.13	305.98700	566.70770	-0.88910	10.98730	9.68420	HepG2	HNRNPF
DBF4	ENSG00000006634.3	363.76120	636.69750	-0.80760	10.92350	9.62250	HepG2	HNRNPF
PAF1	ENSG00000006712.10	1180.32470	1450.98140	-0.29780	3.14550	2.38420	HepG2	HNRNPF
ELAC2	ENSG00000006744.14	1054.82680	1529.49070	-0.53600	9.73290	8.48980	HepG2	HNRNPF
UPP2	ENSG00000007001.8	11.96610	1.88600	2.66540	2.18990	1.54640	HepG2	HNRNPF
MARK4	ENSG00000007047.10	821.48220	666.29510	0.30200	2.59460	1.89950	HepG2	HNRNPF
PROM1	ENSG00000007062.7	412.45740	659.88700	-0.67800	8.56120	7.38890	HepG2	HNRNPF
PAFAH1B1	ENSG00000007168.8	1486.98460	1727.71160	-0.21650	2.11150	1.47810	HepG2	HNRNPF
KIAA0100	ENSG00000007202.10	4257.50240	4834.86260	-0.18350	2.56240	1.87110	HepG2	HNRNPF
TRAPPC6A	ENSG00000007255.6	98.55610	60.42650	0.70570	2.24000	1.59010	HepG2	HNRNPF
PAX6	ENSG00000007372.16	29.34160	69.98990	-1.25420	3.52020	2.71930	HepG2	HNRNPF
BAIAP3	ENSG00000007516.9	148.73140	82.92040	0.84280	3.93660	3.09680	HepG2	HNRNPF
TEAD3	ENSG00000007866.14	1488.46850	1005.20790	0.56620	6.19640	5.18100	HepG2	HNRNPF
E2F2	ENSG00000007968.6	159.58520	224.97920	-0.49550	2.06710	1.44110	HepG2	HNRNPF
PSMB1	ENSG00000008018.8	2592.45640	3347.58100	-0.36880	5.10090	4.16520	HepG2	HNRNPF
NADK	ENSG00000008130.11	1738.25380	1279.83550	0.44160	7.13550	6.05360	HepG2	HNRNPF
CYTH3	ENSG00000008256.11	233.30720	330.33350	-0.50170	3.15530	2.39250	HepG2	HNRNPF
ADAM22	ENSG00000008277.10	253.79980	323.64800	-0.35070	1.93610	1.32960	HepG2	HNRNPF
SPAG9	ENSG00000008294.16	3200.70340	2763.06380	0.21200	2.50020	1.81730	HepG2	HNRNPF
CELSR3	ENSG00000008300.10	1032.17980	785.73480	0.39350	4.25990	3.39110	HepG2	HNRNPF
PLEKHG6	ENSG00000008323.11	487.21220	183.27440	1.41040	24.40370	22.56840	HepG2	HNRNPF
MGST1	ENSG00000008394.8	1358.61040	1887.89410	-0.47460	5.10370	4.16790	HepG2	HNRNPF
CRY1	ENSG00000008405.7	381.98480	509.43630	-0.41540	2.01600	1.39700	HepG2	HNRNPF
NFIX	ENSG00000008441.12	714.38330	556.31790	0.36070	2.87320	2.14390	HepG2	HNRNPF
ST3GAL1	ENSG00000008513.10	1582.52180	938.15580	0.75420	17.22800	15.63560	HepG2	HNRNPF
IL32	ENSG00000008517.12	3559.84740	2740.42350	0.37730	7.20470	6.11820	HepG2	HNRNPF
PKD1	ENSG00000008710.13	1063.98190	487.49950	1.12590	28.71520	26.78610	HepG2	HNRNPF
MAPK8IP2	ENSG00000008735.10	218.52310	96.90260	1.17310	9.19340	7.98460	HepG2	HNRNPF
CSDE1	ENSG00000009307.11	10699.31490	11983.59750	-0.16350	2.04710	1.42340	HepG2	HNRNPF
UBE3C	ENSG00000009335.13	1471.63270	1845.44250	-0.32650	4.38570	3.50550	HepG2	HNRNPF
REV3L	ENSG00000009413.11	1687.30280	2051.71570	-0.28210	3.95360	3.11170	HepG2	HNRNPF
MASP2	ENSG00000009724.12	401.21800	186.61160	1.10420	13.71400	12.27690	HepG2	HNRNPF
VTA1	ENSG00000009844.11	1609.34200	1903.74120	-0.24240	2.65060	1.94740	HepG2	HNRNPF
MLXIPL	ENSG00000009950.11	4712.85200	1950.30440	1.27280	15.81900	14.29210	HepG2	HNRNPF
BAZ1B	ENSG00000009954.6	3139.45000	4026.08890	-0.35890	6.63740	5.59150	HepG2	HNRNPF
SPRTN	ENSG00000010072.11	200.07040	278.18220	-0.47550	2.42700	1.75250	HepG2	HNRNPF
METTL13	ENSG00000010165.15	464.40860	643.79580	-0.47120	4.75500	3.84670	HepG2	HNRNPF
UQCRC1	ENSG00000010256.6	3151.26410	2674.32230	0.23670	2.96210	2.22100	HepG2	HNRNPF
STARD3NL	ENSG00000010270.9	487.43880	653.50880	-0.42300	3.59530	2.78670	HepG2	HNRNPF
NCAPD2	ENSG00000010292.8	2774.97840	3262.50110	-0.23350	2.55660	1.86620	HepG2	HNRNPF
IFFO1	ENSG00000010295.15	504.99890	400.48090	0.33440	2.21060	1.56410	HepG2	HNRNPF
SEMA3G	ENSG00000010319.2	671.02630	396.47250	0.75900	11.00510	9.70090	HepG2	HNRNPF
NISCH	ENSG00000010322.11	1570.91550	1207.80200	0.37910	5.19330	4.24840	HepG2	HNRNPF
SCMH1	ENSG00000010803.12	1939.25900	1349.62130	0.52290	3.48540	2.68810	HepG2	HNRNPF
FYN	ENSG00000010810.13	517.54210	1024.43550	-0.98510	21.60730	19.86820	HepG2	HNRNPF
HIVEP2	ENSG00000010818.4	1522.73570	1068.29490	0.51130	8.19380	7.04180	HepG2	HNRNPF
LYPLA2	ENSG00000011009.6	1810.95470	1339.45760	0.43500	7.13230	6.05100	HepG2	HNRNPF
CLCN6	ENSG00000011021.17	1938.92010	1186.92240	0.70790	17.50940	15.90570	HepG2	HNRNPF
TSPAN9	ENSG00000011105.7	1130.98820	580.09190	0.96310	23.06460	21.27350	HepG2	HNRNPF
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

102 RBPs can affect the gene expression of HNRNPF :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HNRNPF	ENSG00000169813.12	5544.17650	6827.77510	-0.30040	2.33370	1.46660	HepG2	ABCF1
HNRNPF	ENSG00000169813.12	4361.37800	4919.56800	-0.17370	2.45290	1.87410	HepG2	ACO1
HNRNPF	ENSG00000169813.12	4187.70590	6152.81540	-0.55510	5.43550	4.71900	HepG2	AKAP1
HNRNPF	ENSG00000169813.12	5957.54010	7254.35620	-0.28410	5.17570	4.28530	HepG2	AUH
HNRNPF	ENSG00000169813.12	2932.42940	4479.05250	-0.61110	6.87610	5.36160	HepG2	BCCIP
HNRNPF	ENSG00000169813.12	3006.43650	3891.69400	-0.37230	3.38730	2.39520	HepG2	BCLAF1
HNRNPF	ENSG00000169813.12	4605.54660	6277.87490	-0.44690	5.68390	4.86350	HepG2	BOP1
HNRNPF	ENSG00000169813.12	3846.26510	4847.73400	-0.33390	4.36600	3.42260	HepG2	CALR
HNRNPF	ENSG00000169813.12	5439.50660	7512.40520	-0.46580	3.56870	2.44760	HepG2	CCAR1
HNRNPF	ENSG00000169813.12	3801.51400	4918.27850	-0.37160	10.46280	9.33960	HepG2	CKAP4
HNRNPF	ENSG00000169813.12	3989.21120	5763.39750	-0.53080	6.94440	5.89370	HepG2	CPSF6
HNRNPF	ENSG00000169813.12	5042.64550	5988.71970	-0.24810	3.45670	2.75530	HepG2	CELF1
HNRNPF	ENSG00000169813.12	3915.71430	4549.79430	-0.21650	3.64440	2.70540	HepG2	DDX19B
HNRNPF	ENSG00000169813.12	3915.88730	5894.03900	-0.58990	7.01200	6.05840	HepG2	DDX3X
HNRNPF	ENSG00000169813.12	2756.82370	4403.97030	-0.67580	8.28740	7.02990	HepG2	DDX55
HNRNPF	ENSG00000169813.12	3788.43130	4706.63650	-0.31310	5.74940	4.83720	HepG2	DKC1
HNRNPF	ENSG00000169813.12	3501.80490	4867.29010	-0.47500	4.80020	4.03100	HepG2	EIF2S1
HNRNPF	ENSG00000169813.12	4007.42210	5379.04900	-0.42470	3.42270	2.71290	HepG2	EIF4A3
HNRNPF	ENSG00000169813.12	3191.86830	5237.02750	-0.71430	6.77640	5.73160	HepG2	EIF4B
HNRNPF	ENSG00000169813.12	5402.09290	6352.77050	-0.23390	3.41960	2.50460	HepG2	EIF4G1
HNRNPF	ENSG00000169813.12	4080.48880	6085.50100	-0.57660	8.18670	6.81780	HepG2	EIF4G2
HNRNPF	ENSG00000169813.12	6365.19620	8329.00330	-0.38790	9.44940	8.44720	HepG2	ETF1
HNRNPF	ENSG00000169813.12	2468.53190	2997.16560	-0.27990	2.89680	1.70080	HepG2	FAM120A
HNRNPF	ENSG00000169813.12	3439.95680	5034.40890	-0.54940	5.71980	4.77660	HepG2	G3BP1
HNRNPF	ENSG00000169813.12	4744.47100	6533.16800	-0.46150	4.39400	3.59920	HepG2	GPKOW
HNRNPF	ENSG00000169813.12	2469.29070	3923.93410	-0.66820	11.64030	10.45970	HepG2	HNRNPA1
HNRNPF	ENSG00000169813.12	4757.69800	5917.81020	-0.31480	5.82670	4.55380	HepG2	HNRNPA2B1
HNRNPF	ENSG00000169813.12	3291.17920	4364.78820	-0.40730	4.77330	3.88100	HepG2	HNRNPC
HNRNPF	ENSG00000169813.12	1834.48260	6200.79190	-1.75710	140.41980	137.11350	HepG2	HNRNPF
HNRNPF	ENSG00000169813.12	4004.68070	5865.38400	-0.55050	23.49620	21.73230	HepG2	HNRNPL
HNRNPF	ENSG00000169813.12	4294.36420	6234.73090	-0.53790	6.77400	5.83850	HepG2	HNRNPLL
HNRNPF	ENSG00000169813.12	3412.69910	4335.92080	-0.34540	5.00320	4.20800	HepG2	HNRNPU
HNRNPF	ENSG00000169813.12	4381.77870	5902.16260	-0.42970	3.21360	1.88430	HepG2	HSPD1
HNRNPF	ENSG00000169813.12	4715.62370	6106.04710	-0.37280	4.99010	4.04480	HepG2	IGF2BP1
HNRNPF	ENSG00000169813.12	3648.89970	5117.43530	-0.48800	5.11420	4.22130	HepG2	IGF2BP2
HNRNPF	ENSG00000169813.12	2790.57850	4802.21550	-0.78310	3.26290	2.19300	HepG2	IGF2BP3
HNRNPF	ENSG00000169813.12	3751.47670	4428.97610	-0.23950	2.50250	1.80120	HepG2	ILF2
HNRNPF	ENSG00000169813.12	3035.51160	4360.69730	-0.52260	6.98440	5.11530	HepG2	LIN28B
HNRNPF	ENSG00000169813.12	3951.39590	5587.84810	-0.49990	5.00900	4.16720	HepG2	NCBP2
HNRNPF	ENSG00000169813.12	4079.70220	4852.51520	-0.25030	3.98420	3.28310	HepG2	PCBP1
HNRNPF	ENSG00000169813.12	2283.83480	3396.60660	-0.57260	6.93110	5.71970	HepG2	PRPF8
HNRNPF	ENSG00000169813.12	3991.55230	4937.68190	-0.30690	5.57290	4.85120	HepG2	PTBP1
HNRNPF	ENSG00000169813.12	4680.10620	6095.08440	-0.38110	4.64200	3.89270	HepG2	PUF60
HNRNPF	ENSG00000169813.12	7405.76920	6465.51180	0.19580	2.01870	1.43940	HepG2	PUM2
HNRNPF	ENSG00000169813.12	4047.86580	5010.86690	-0.30790	6.55940	5.68190	HepG2	PUS1
HNRNPF	ENSG00000169813.12	4629.11630	5347.49020	-0.20810	2.20670	1.63770	HepG2	QKI
HNRNPF	ENSG00000169813.12	5119.72020	6961.49890	-0.44330	9.52850	8.69740	HepG2	RBM22
HNRNPF	ENSG00000169813.12	3994.36540	4853.24450	-0.28100	2.87410	2.18950	HepG2	RBM25
HNRNPF	ENSG00000169813.12	4199.98490	5495.11090	-0.38780	8.76870	7.90460	HepG2	NELFE
HNRNPF	ENSG00000169813.12	4189.32900	5118.04880	-0.28890	5.22290	4.41040	HepG2	RECQL
HNRNPF	ENSG00000169813.12	3826.98760	6679.21500	-0.80350	16.53000	15.13630	HepG2	RPLP0
HNRNPF	ENSG00000169813.12	3696.04460	4618.65700	-0.32150	2.82650	2.01750	HepG2	RPS2
HNRNPF	ENSG00000169813.12	3104.03420	5008.25250	-0.69020	6.51830	5.29560	HepG2	RPS3A
HNRNPF	ENSG00000169813.12	2490.44080	3359.87820	-0.43200	3.81290	2.90780	HepG2	RRP9
HNRNPF	ENSG00000169813.12	4293.13550	5140.64540	-0.25990	4.38340	3.66500	HepG2	SF3B4
HNRNPF	ENSG00000169813.12	5220.65060	5844.43560	-0.16280	2.46010	1.79270	HepG2	SLBP
HNRNPF	ENSG00000169813.12	5160.97410	4502.73210	0.19670	2.50040	1.88430	HepG2	SMN1
HNRNPF	ENSG00000169813.12	7081.66400	7862.74520	-0.15090	2.27790	1.80910	HepG2	SRFBP1
HNRNPF	ENSG00000169813.12	4568.33680	6091.94450	-0.41520	9.38230	8.23180	HepG2	SRSF7
HNRNPF	ENSG00000169813.12	5113.82960	6826.70400	-0.41680	11.47990	10.57490	HepG2	SSB
HNRNPF	ENSG00000169813.12	2951.67430	4383.88140	-0.57070	6.46810	5.50030	HepG2	SUPV3L1
HNRNPF	ENSG00000169813.12	3942.82230	4823.09730	-0.29070	4.17180	3.50470	HepG2	TAF15
HNRNPF	ENSG00000169813.12	3868.56390	6077.17660	-0.65160	10.65000	9.36300	HepG2	TARDBP
HNRNPF	ENSG00000169813.12	3681.67460	4431.62660	-0.26750	2.70270	1.87550	HepG2	TIA1
HNRNPF	ENSG00000169813.12	3596.65890	4212.64330	-0.22810	2.27900	1.81630	HepG2	TIAL1
HNRNPF	ENSG00000169813.12	7372.68470	5897.44490	0.32200	2.85720	2.21940	HepG2	U2AF1
HNRNPF	ENSG00000169813.12	2050.90140	2589.55480	-0.33640	2.71950	1.96610	HepG2	UCHL5
HNRNPF	ENSG00000169813.12	4788.90020	5522.13960	-0.20550	3.22130	2.47900	HepG2	UPF1
HNRNPF	ENSG00000169813.12	2840.52460	4013.75750	-0.49880	3.68370	2.51010	HepG2	UPF2
HNRNPF	ENSG00000169813.12	6082.87830	5331.41250	0.19010	2.79960	2.19950	HepG2	UTP3
HNRNPF	ENSG00000169813.12	3340.76640	4485.93180	-0.42520	2.68160	1.60600	HepG2	XPO5
HNRNPF	ENSG00000169813.12	3547.00430	4315.45660	-0.28290	2.35760	1.68380	HepG2	XRN2
HNRNPF	ENSG00000169813.12	3244.82670	4451.85420	-0.45630	5.56650	4.66520	HepG2	ZC3H8
HNRNPF	ENSG00000169813.12	4988.32120	6073.29990	-0.28390	7.42710	6.64300	HepG2	ZNF622
HNRNPF	ENSG00000169813.12	16348.46790	13485.44600	0.27770	6.21740	5.41880	K562	AGGF1
HNRNPF	ENSG00000169813.12	8037.25550	9857.59820	-0.29450	5.11470	3.22650	K562	BCCIP
HNRNPF	ENSG00000169813.12	7393.71200	9525.95190	-0.36560	9.74920	7.93290	K562	BCLAF1
HNRNPF	ENSG00000169813.12	4896.67890	6184.38370	-0.33680	3.18690	2.03940	K562	CCAR1
HNRNPF	ENSG00000169813.12	12987.77400	16115.84110	-0.31130	4.15780	2.67460	K562	CCDC124
HNRNPF	ENSG00000169813.12	6069.32760	7226.85390	-0.25180	3.52760	2.31420	K562	CSTF2
HNRNPF	ENSG00000169813.12	10118.56840	11967.44160	-0.24210	3.89650	2.44800	K562	DDX21
HNRNPF	ENSG00000169813.12	7217.45240	8352.59150	-0.21070	3.01640	1.62820	K562	DDX27
HNRNPF	ENSG00000169813.12	13468.74330	17479.34680	-0.37600	9.54200	8.41790	K562	DDX47
HNRNPF	ENSG00000169813.12	16956.92060	15099.66080	0.16730	2.04780	1.30580	K562	DKC1
HNRNPF	ENSG00000169813.12	3948.47740	6290.56810	-0.67190	4.88300	3.50580	K562	EIF3A
HNRNPF	ENSG00000169813.12	6765.78890	8498.36170	-0.32890	2.21960	1.30340	K562	EIF3D
HNRNPF	ENSG00000169813.12	5751.86550	6683.44680	-0.21660	2.36990	1.32400	K562	EIF4B
HNRNPF	ENSG00000169813.12	15353.31290	19110.72540	-0.31580	5.94240	4.58380	K562	EIF4G2
HNRNPF	ENSG00000169813.12	5481.82730	6801.07790	-0.31110	3.70870	1.83550	K562	FASTKD2
HNRNPF	ENSG00000169813.12	7018.52150	8677.20700	-0.30610	2.23590	1.41850	K562	FTO
HNRNPF	ENSG00000169813.12	4447.35990	5620.09940	-0.33760	4.86360	3.03930	K562	FUS
HNRNPF	ENSG00000169813.12	9037.42070	7717.99080	0.22760	3.33300	2.67760	K562	FXR1
HNRNPF	ENSG00000169813.12	3413.58400	5855.28700	-0.77850	8.56420	7.17640	K562	G3BP2
HNRNPF	ENSG00000169813.12	10068.87190	12697.43250	-0.33460	4.58910	3.12650	K562	GLRX3
HNRNPF	ENSG00000169813.12	13986.48430	17023.71600	-0.28350	3.26750	2.44820	K562	GRSF1
HNRNPF	ENSG00000169813.12	9114.21820	11684.12620	-0.35840	4.85010	3.44330	K562	HNRNPA1
HNRNPF	ENSG00000169813.12	5547.01590	9558.74540	-0.78510	8.86570	7.84760	K562	HNRNPC
HNRNPF	ENSG00000169813.12	1959.94120	8534.47090	-2.12250	37.72470	34.05840	K562	HNRNPF
HNRNPF	ENSG00000169813.12	13126.64070	15796.60730	-0.26710	2.81950	1.75130	K562	HNRNPL
HNRNPF	ENSG00000169813.12	6352.04730	8203.06340	-0.36890	2.45990	1.58510	K562	KRR1
HNRNPF	ENSG00000169813.12	10079.02140	13349.73050	-0.40550	12.54760	10.97210	K562	MTPAP
HNRNPF	ENSG00000169813.12	11531.73350	14832.54710	-0.36320	18.25500	16.56720	K562	NSUN2
HNRNPF	ENSG00000169813.12	10151.41860	12915.25590	-0.34740	2.92190	2.06580	K562	PCBP3
HNRNPF	ENSG00000169813.12	16723.15960	19636.88490	-0.23170	2.84270	1.38270	K562	PNPT1
HNRNPF	ENSG00000169813.12	7907.83430	9906.33550	-0.32510	4.31070	3.30660	K562	POLR2G
HNRNPF	ENSG00000169813.12	16131.93280	13559.15250	0.25060	2.72210	2.13320	K562	RBM15
HNRNPF	ENSG00000169813.12	5000.71270	7867.62780	-0.65380	7.69820	6.32080	K562	RPS19
HNRNPF	ENSG00000169813.12	5537.56540	7555.45590	-0.44830	5.11370	3.69400	K562	RPS3
HNRNPF	ENSG00000169813.12	7222.13580	6086.00220	0.24680	2.63070	1.79900	K562	SF3B4
HNRNPF	ENSG00000169813.12	4695.86290	5837.55200	-0.31400	3.52090	1.68630	K562	SND1
HNRNPF	ENSG00000169813.12	12663.22710	14995.17070	-0.24390	6.21280	4.87720	K562	SRPK2
HNRNPF	ENSG00000169813.12	5114.86720	7478.27710	-0.54800	6.05620	4.50850	K562	SUPV3L1
HNRNPF	ENSG00000169813.12	3765.10310	5747.44870	-0.61020	3.39670	1.71280	K562	TAF15
HNRNPF	ENSG00000169813.12	6251.46280	8243.14980	-0.39900	2.72340	1.79500	K562	TIAL1
HNRNPF	ENSG00000169813.12	6199.36970	7914.93740	-0.35250	3.25110	2.14260	K562	UCHL5
HNRNPF	ENSG00000169813.12	12007.78510	15727.28020	-0.38930	11.42830	10.09320	K562	UPF1
HNRNPF	ENSG00000169813.12	9585.74160	13457.31080	-0.48940	8.41820	6.84860	K562	WDR3
HNRNPF	ENSG00000169813.12	11822.53720	13994.22140	-0.24330	4.28400	3.24780	K562	WDR43
HNRNPF	ENSG00000169813.12	6538.77860	8059.77980	-0.30170	2.47250	1.34980	K562	XRN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HNRNPF is not available on ENCORE database.

16 RBPs can affect the splicing of HNRNPF :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	HNRNPF	ENSG00000169813.12	chr10	-	43892632	43892796			43891903	43892038	43903164	43903267	0.17900	0.00000	0.00000	included	HepG2	U2AF1
SE	HNRNPF	ENSG00000169813.12	chr10	-	43892632	43892796			43891903	43892038	43904578	43904614	0.12300	0.00000	0.00009	included	HepG2	DDX3X
SE	HNRNPF	ENSG00000169813.12	chr10	-	43892632	43892796			43891903	43892038	43903164	43903267	0.12600	0.00000	0.00011	included	HepG2	NCBP2
SE	HNRNPF	ENSG00000169813.12	chr10	-	43892632	43892796			43891903	43892038	43903164	43903267	0.07100	0.00001	0.00028	included	K562	HNRNPC
A3SS	HNRNPF	ENSG00000169813.12	chr10	-	43891903	43892070			43891903	43892038	43904537	43904614	-0.36000	0.00010	0.03341	shorter	HepG2	AKAP1
A3SS	HNRNPF	ENSG00000169813.12	chr10	-	43891903	43892070			43891903	43892038	43904174	43904330	0.40500	0.00000	0.00001	longer	K562	AQR
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	0.11700	0.00000	0.00014	1included	K562	UCHL5
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	0.06800	0.00009	0.00308	1included	K562	DROSHA
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	0.08700	0.00016	0.00837	1included	K562	XRN2
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	-0.06500	0.00106	0.01659	2included	K562	U2AF2
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	0.08000	0.00620	0.09482	1included	HepG2	DDX55
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	-0.09800	0.00000	0.00023	2included	K562	AARS
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	-0.14400	0.00000	0.00000	2included	K562	DDX55
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	0.07000	0.00266	0.05109	1included	K562	SUPV3L1
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	0.05500	0.00131	0.02813	1included	K562	HNRNPUL1
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	0.11800	0.00000	0.00029	1included	K562	SERBP1
MXE	HNRNPF	ENSG00000169813.12	chr10	-	43890077	43890136	43891903	43892038	43881064	43883384	43903164	43903267	0.08200	0.00046	0.08090	1included	K562	GEMIN5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HNRNPF

General Information

Functions

Localization(RBPImage: HNRNPF)

Domains (AlphaFold: HNRNPF)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HNRNPF is not avaliable on ENCORE database.

59 proteins are bound to HNRNPF RNA:

eCLIP assay for HNRNPF is not avaliable on ENCORE database.

Diffrential Expression

8,217 differentially expressed genes after Knockdown/Knockout HNRNPF protein :

102 RBPs can affect the gene expression of HNRNPF :

The Knockdown/knockout RNA-Seq assay for HNRNPF is not available on ENCORE database.

16 RBPs can affect the splicing of HNRNPF :

The Knockdown/knockout RNA-Seq assay for HNRNPF is not avaliable on ENCORE database.