SUB1

General Information

Gene Name       : SUB1
Gene ID             : ENSG00000113387.11
Essential Gene : No

Functions

Localization(RBPImage: SUB1)

Domains (AlphaFold: SUB1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SUB1ENSG00000113387.11614.22592.61603.41ENCSR000AEF
HepG2SUB1ENSG00000113387.11215.41518.94367.18ENCSR985KAT
K562SUB1ENSG00000113387.11272.96304.42288.69ENCSR000AEO

Assays

3 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 632ENCSR406OOZSUB1HepG2ReleasedENCAB835QRDENCSR641PRC  
knockdown followed by RNA-seq SUB1-BGKLV13-K562ENCSR047AJASUB1K562ReleasedENCSR815CVQ   shRNAKD% = 92.3,95.2
knockdown followed by RNA-seq SUB1-BGHLV14-HepG2ENCSR997FOTSUB1HepG2ReleasedENCSR491FOC   shRNAKD% = 84.6,76.3






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
SUB1632HepG2ENCSR406OOZENCSR641PRCENCAB835QRDA301-161A1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
SUB1ENCAB835QRDA301-161A1Released, ENCODE3BGHLV14-57, Released, ENCODE3BGKLV13-41, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SUB1K562shRNAENCSR047AJAENCSR815CVQSUB1_BGKLV13_41,SUB1_BGKLV13_42NT_BGKLV13_1,NT_BGKLV13_292.3,95.2ReleasedENCODE3
SUB1HepG2shRNAENCSR997FOTENCSR491FOCSUB1_BGHLV14-57,SUB1_BGHLV14-58NT_BGHLV14-1,NT_BGHLV14-284.6,76.3ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    SUB1: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Nucleolus












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    SUB1Product_ID: A301-161A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: SUB1-human    		 HepG2_Bethyl_A301-161A_1_SUB1.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using SUB1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-SUB1 antibody (lanes under 'SUB1').
    		 SUB1_Secondary_Western.png<br>Caption: Western blot following shRNA against SUB1 in K562 and HepG2 whole cell lysate using SUB1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against SUB1. Lanes 5-8 follow the same pattern, but in HepG2. SUB1 protein appears as the green band, Tubulin serves as a control and appears in red.
    		 SUB1_Secondary_Western.png<br>Caption: Western blot following shRNA against SUB1 in K562 and HepG2 whole cell lysate using SUB1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against SUB1. Lanes 5-8 follow the same pattern, but in HepG2. SUB1 protein appears as the green band, Tubulin serves as a control and appears in red.








    RNA Targets
    • SUB1 protein binds to 3,385 RNA regions.  





    Proteins bound to RNA
    • SUB1 RNA is bound by 23 proteins.  






    SUB1 protein has 3,385 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 3,385 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    SUB1chr142092581420925867+5.405636.23813HepG2APEX13'-UTR
    SUB1chr34906677049066798-3.602776.75464HepG2IMPDH25'-UTR,CDS,intron-Distal
    SUB1chr24411564744115686-8.3921997.29289HepG2LRPPRC3'-UTR,intron-Distal
    SUB1chr1010634201063510+5.4339312.20177HepG2GTPBP43'-UTR
    SUB1chr34035374240353824+4.757447.83850HepG2EIF1B3'-UTR
    SUB1chr16214680162146906-4.516246.88705HepG2TM2D13'-UTR,intron-Distal,intron-Proximal
    SUB1chr48437726584377303+5.718449.21129HepG2MRPS18CCDS
    SUB1chr168100978281009868-5.562466.73016HepG2CMC23'-UTR,intron-Distal,intron-Proximal
    SUB1chr193922106439221140+5.7316718.14069HepG2ACTN43'-UTR
    SUB1chr24257771742577818-4.5716225.99706HepG2COX7A2L3'-UTR,intron-Distal
    SUB1chr16417408417463-4.840994.29122HepG2MRPL283'-UTR,CDS,intron-Distal,intron-Proximal
    SUB1chr12118471624118471715-5.384727.54335HepG2WSB23'-UTR,intron-Distal
    SUB1chr116229074562290829-4.840994.18952HepG2AHNAKCDS,intron-Distal
    SUB1chr191304441413044489-3.838737.62714HepG2FARSACDS,intron-Distal,intron-Proximal
    SUB1chr12622721326227246-5.3645185.57973HepG2STMN13'-UTR,intron-Distal,intron-Proximal
    SUB1chr171628446116284470+8.35341400.00000HepG2UBB5'-UTR,intron-Distal
    SUB1chr3129290024129290064-4.633474.18952HepG2PLXND1CDS,intron-Distal,intron-Proximal
    SUB1chr62602088326020947+5.533714.77410HepG2HIST1H3ACDS
    SUB1chr9111630976111631075-5.677217.71888HepG2IKBKAP3'-UTR,intron-Distal
    SUB1chr12112591124112591154+4.601206.88705HepG2TRAFD13'-UTR
    SUB1chr124952161749521627-9.02975400.00000HepG2TUBA1B3'-UTR,intron-Distal
    SUB1chr206088769060887767-4.668678.79791HepG2LAMA5CDS,intron-Distal
    SUB1chr163008170730081717+6.5833857.48064HepG2ALDOA3'-UTR
    SUB1chr72623167326231679-6.42863400.00000HepG2HNRNPA2B13'-UTR,intron-Distal
    SUB1chr172690122626901254-3.177214.77875HepG2RP11-192H23.4, ALDOCCDS,intron-Distal
    SUB1chr156679544866795465-3.6682447.70648HepG2RPL43'-UTR,CDS,intron-Distal
    SUB1chr7127569355127569375+3.595075.60176HepG2SND1CDS
    SUB1chr1269798026979924+3.8810014.27428HepG2TPI13'-UTR
    SUB1chr142349552523495557-4.096474.43788HepG2PSMB53'-UTR,CDS,intron-Distal
    SUB1chr1173834675173834686-3.568526.35105HepG2GAS5intron-Distal,intron-Proximal
    SUB1chr24411551344115566-6.7883326.67337HepG2LRPPRC3'-UTR,intron-Distal
    SUB1chr108591249185912567+5.7784673.56637HepG2GHITM3'-UTR
    SUB1chr129899536698995377+7.6413751.59433HepG2SLC25A33'-UTR
    SUB1chr155824573958245812-4.0420413.56650HepG2ALDH1A23'-UTR,intron-Distal
    SUB1chr177313210273132192-4.7738413.25377HepG2HN13'-UTR,CDS,intron-Distal,intron-Proximal
    SUB1chr25546049855460513+3.5907227.03118HepG2RPS27ACDS,intron-Proximal
    SUB1chr1110204160110204305+4.453486.88705HepG2GSTM43'-UTR,intron-Distal
    SUB1chr108591217585912202+3.8324917.25293HepG2GHITM3'-UTR
    SUB1chr174115468941154712+6.45913400.00000HepG2RPL27CDS,intron-Proximal
    SUB1chr34128116341281247+5.7574424.03504HepG2CTNNB13'-UTR,intron-Distal,intron-Proximal
    SUB1chr1182352518182352554-3.293286.09430HepG2GLUL3'-UTR,intron-Distal
    SUB1chr29826389298263906+4.113158.04249HepG2COX5BCDS
    SUB1chr108111428381114337+5.7920310.71230HepG2PPIF3'-UTR
    SUB1chr145005303450053085-4.9857517.13613HepG2RPS295'-UTR,CDS,intron-Distal,intron-Proximal
    SUB1chr5179263746179263832+4.9015030.31734HepG2SQSTM13'-UTR
    SUB1chr12340989523409974+4.6856410.86155HepG2KDM1A3'-UTR
    SUB1chr203524055235240652+6.2090211.94930HepG2C20orf24, TGIF2-C20orf243'-UTR,CDS
    SUB1chr162404349424043563+3.583714.86893HepG2PRKCBCDS,intron-Distal
    SUB1chr84889039148890460+4.249168.29347HepG2MCM43'-UTR
    SUB1chr173854556338545600-5.3034011.71197HepG2TOP2A3'-UTR,intron-Distal
    SUB1chr224248671642486764-3.431283.99895HepG2NDUFA65'-UTR,CDS,intron-Distal
    SUB1chr174749219647492234-5.0712328.25493HepG2PHB5'-UTR,intron-Distal,intron-Proximal
    SUB1chr19329910193299151+3.2077542.57065HepG2RPL55'-UTR,CDS,intron-Proximal
    SUB1chrX153580559153580603-3.190777.87742HepG2FLNA3'-UTR,CDS,intron-Distal
    SUB1chr176652877766528831+5.395256.57575HepG2PRKAR1A3'-UTR,intron-Distal
    SUB1chr224623969446239835+8.5343359.87367HepG2ATXN103'-UTR
    SUB1chr173405266834052769+4.602778.11444HepG2AP2B13'-UTR
    SUB1chr12120636356120636401-4.0629015.82713HepG2RPLP03'-UTR,CDS,intron-Distal,intron-Proximal
    SUB1chr93505658035056698-7.4138323.38887HepG2VCP3'-UTR,intron-Distal
    SUB1chr177455955874559576+5.2264111.22320HepG2SNHG16intron-Proximal
    SUB1chr154589872445898770+4.376196.41483HepG2RP11-96O20.4, BLOC1S63'-UTR,intron-Distal
    SUB1chr177810913878109289-5.7618516.64724HepG2EIF4A33'-UTR,intron-Distal
    SUB1chr26549602565496077+5.5608026.95274HepG2ACTR23'-UTR
    SUB1chr8100899809100899846-3.235544.85789HepG2COX6CCDS,intron-Distal
    SUB1chr63864503638645074-5.2517212.69254HepG2GLO13'-UTR,intron-Distal
    SUB1chr64349025543490318-4.925964.18952HepG2XPO53'-UTR,intron-Distal
    SUB1chr22424135724241414+3.744673.55454HepG2MFSD2Bintron-Distal
    SUB1chrX154007044154007087-5.1715313.73579HepG2MPP13'-UTR,intron-Distal
    SUB1chr177947733279477396-6.00451400.00000HepG2ACTG13'-UTR,intron-Distal
    SUB1chr6160200002160200058-6.8631914.23800HepG2TCP13'-UTR,intron-Distal,intron-Proximal
    SUB1chr129899383198993857+5.0073511.22320HepG2SLC25A33'-UTR,CDS
    SUB1chr223824728938247361+3.011515.71847HepG2EIF3L5'-UTR,CDS
    SUB1chr8103266450103266495-5.244676.23813HepG2UBR53'-UTR,intron-Distal
    SUB1chr156679579566795847-5.0407661.39234HepG2RPL43'-UTR,CDS,intron-Distal
    SUB1chr6108532992108533095-4.7029827.91945HepG2SNX33'-UTR,intron-Distal
    SUB1chr142173751421737576-3.2301010.45898HepG2HNRNPC5'-UTR,intron-Distal,intron-Proximal
    SUB1chrX3023790530238032+4.9083812.77284HepG2MAGEB23'-UTR
    SUB1chr2232319526232319561-4.8552519.08963HepG2NCL3'-UTR,intron-Distal,intron-Proximal
    SUB1chr5177637945177637985+4.781097.83850HepG2HNRNPAB3'-UTR
    SUB1chr1990425990499+3.052279.42983HepG2AGRN3'-UTR
    SUB1chr2170668480170668513+5.4953117.62510HepG2SSB3'-UTR
    SUB1chr126484200264842086+4.7823116.24647HepG2XPOT3'-UTR
    SUB1chr165639580156395860-4.453486.88705HepG2AMFR3'-UTR,intron-Distal,intron-Proximal
    SUB1chr11773543017735488-4.070717.84240HepG2RCC23'-UTR,intron-Distal
    SUB1chr14102547812102547821-6.33419400.00000HepG2HSP90AA13'-UTR,intron-Distal
    SUB1chr34913342149133506-3.248786.42779HepG2QARS3'-UTR,CDS,intron-Distal,intron-Proximal
    SUB1chr9124906349124906504-6.5371516.77041HepG2NDUFA83'-UTR,intron-Distal
    SUB1chr93743677237436861+5.605906.23813HepG2GRHPR3'-UTR,CDS,intron-Distal,intron-Proximal
    SUB1chr3127340986127341036+4.9076911.22320HepG2MCM23'-UTR
    SUB1chr97578499575785166+3.562806.69562HepG2ANXA13'-UTR,CDS
    SUB1chr9138825005138825083-6.4689049.68144HepG2UBAC13'-UTR,intron-Distal
    SUB1chr12944578729445856+4.1012019.66906HepG2EPB413'-UTR
    SUB1chr2198351487198351541-6.4285842.87489HepG2HSPD13'-UTR,intron-Distal
    SUB1chr7106800328106800392+3.087824.65557HepG2PRKAR2B3'-UTR
    SUB1chr118566987285669949-3.145406.51465HepG2PICALM3'-UTR,intron-Distal,intron-Proximal
    SUB1chr4109578764109578793+5.6105712.87577HepG2OSTCCDS
    SUB1chr26141482861414908-4.744674.29122HepG2USP343'-UTR,intron-Distal
    SUB1chr4174253130174253153-4.4329724.63156HepG2HMGB23'-UTR,intron-Distal
    SUB1chr10104240457104240515-4.570718.31731HepG2ACTR1A3'-UTR,intron-Distal,intron-Proximal
    SUB1chr167433997374340045+5.441817.05883HepG2PSMD73'-UTR




    23 proteins are bound to SUB1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr53260125932601330+3'-UTR3.662136.11515K562CPSF6
    chr53260406832604094+3'-UTR4.823167.39957K562KHSRP
    chr53260133032601419+3'-UTR4.169783.31824HepG2TIAL1
    chr53260125232601301+3'-UTR6.2624826.16892HepG2SUB1
    chr53258861732588630+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.473575.16005K562LIN28B
    chr53260131832601411+3'-UTR3.3107911.99740K562ZC3H11A
    chr53260133232601424+3'-UTR3.0381230.07312K562PUM2
    chr53260144032601519+3'-UTR5.3821411.00359K562LIN28B
    chr53260125732601318+3'-UTR3.879406.02629K562ZC3H11A
    chr53260406832604128+3'-UTR4.523174.80438HepG2KHSRP
    chr53260130432601413+3'-UTR5.0048825.52271HepG2SUB1
    chr53260176932601849+3'-UTR3.152893.69775K562YBX3
    chr53260409432604149+3'-UTR5.064389.15655K562KHSRP
    chr53258861732588640+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.5395724.47417K562DDX3X
    chr53260125132601323+3'-UTR3.677058.10352HepG2FUBP3
    chr53260370032603833+3'-UTR4.512416.03393K562YBX3
    chr53260111032601197+3'-UTR,CDS,intron-Proximal3.176674.55847HepG2G3BP1
    chr53260113332601205+3'-UTR,CDS3.261293.37451K562APOBEC3C
    chr53260169832601792+3'-UTR4.874957.53406K562TIA1
    chr53260123832601308+3'-UTR3.693099.89787K562NOLC1
    chr53258585632585905+5'-UTR,intron-Distal4.136204.87812HepG2XRN2
    chr53258598932586089+5'-UTR,intron-Distal,intron-Proximal4.028996.51668K562XRN2
    chr53258596432586125+5'-UTR,intron-Distal,intron-Proximal3.4954010.47098HepG2EFTUD2
    chr53258573132585772+5'-UTR,intron-Distal,intron-Proximal4.735954.62947HepG2AQR
    chr53258572832585793+5'-UTR,intron-Distal,intron-Proximal4.049855.47926K562AQR
    chr53258566232585694+5'-UTR,intron-Distal3.413745.15600K562LIN28B
    chr53258566932585733+5'-UTR,intron-Distal,intron-Proximal3.272188.39625HepG2DDX3X
    chr53258585532585908+5'-UTR,intron-Distal3.108513.00437HepG2HNRNPK
    chr53258568132585735+5'-UTR,intron-Distal,intron-Proximal4.150675.39661K562GEMIN5
    chr53258565932585732+5'-UTR,intron-Distal,intron-Proximal4.5508761.39545K562DDX3X
    chr53258569432585732+5'-UTR,intron-Distal,intron-Proximal4.3309116.08608K562LIN28B
    chr53259175532591823+CDS,intron-Proximal3.880855.90868HepG2PRPF8
    chr53259170232591792+CDS,intron-Proximal4.9892123.98768K562LIN28B
    chr53259013632590227+intron-Distal3.227243.56114HepG2KHSRP
    chr53258628532586335+intron-Distal3.976993.65412HepG2HNRNPK
    chr53259710532597220+intron-Distal5.2133418.35910HepG2HNRNPM
    chr53259799732598058+intron-Distal3.432634.93120K562KHSRP
    chr53255681532556905+intron-Distal5.510036.79597HepG2XPO5
    chr53259996332600050+intron-Distal3.026014.35941K562KHSRP
    chr53259712132597207+intron-Distal3.199573.83677K562HNRNPM
    chr53259745332597505+intron-Distal4.730956.58261K562KHSRP
    chr53259150632591589+intron-Distal,intron-Proximal3.490825.57010K562KHSRP
    chr53259024532590340+intron-Distal3.012783.11628K562KHSRP
    chr53253688432536957+intron-Distal,intron-Proximal5.048477.72290HepG2HNRNPK
    chr53258612532586198+intron-Distal,intron-Proximal4.260668.44359HepG2EFTUD2
    chr53258614832586216+intron-Distal,intron-Proximal3.756375.80161HepG2CSTF2T
    chr53259694032596982+intron-Distal3.801123.66782HepG2HNRNPM
    chr53259158932591651+intron-Proximal3.233066.18396K562KHSRP
    chr53259181932591864+intron-Proximal3.942173.12843K562PRPF8
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    The SUB1 protein binds to its own RNA.

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    SUB1chr53260125232601301+6.2624826.16892HepG2SUB13'-UTR
    SUB1chr53260130432601413+5.0048825.52271HepG2SUB13'-UTR


    Diffrential Expression
    • 1,746 differentially expressed genes after Knockdown/Knockout SUB1 protein.  





    • 118 RBPs can affect the levels of SUB1.  







    1,746 differentially expressed genes after Knockdown/Knockout SUB1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 1,746 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    C1orf112ENSG00000000460.12206.04570360.45380-0.806903.804202.38560HepG2SUB1
    GCLCENSG00000001084.61843.295701058.599500.800006.650804.82930HepG2SUB1
    CYP51A1ENSG00000001630.114853.355703386.090900.519303.423402.07780HepG2SUB1
    TFPIENSG00000003436.1020899.193208590.245701.2826018.9661016.23560HepG2SUB1
    SLC7A2ENSG00000003989.1211150.730506115.436400.866508.988006.90850HepG2SUB1
    PLXND1ENSG00000004399.82329.392501420.101100.713902.634401.46560HepG2SUB1
    KDM1AENSG00000004487.112062.360103083.49940-0.580303.940502.49330HepG2SUB1
    IBTKENSG00000005700.103467.789902098.743800.724406.280404.49740HepG2SUB1
    FBXL3ENSG00000005812.6699.08440443.015700.658003.688602.29090HepG2SUB1
    TNFRSF12AENSG00000006327.9778.28730351.972001.144709.765207.59780HepG2SUB1
    BAIAP2L1ENSG00000006453.9988.73760680.682800.538502.886701.65850HepG2SUB1
    JHDM1DENSG00000006459.63238.823001818.098600.832907.182905.29370HepG2SUB1
    IFRD1ENSG00000006652.9893.41500459.500600.959207.609605.68040HepG2SUB1
    E2F2ENSG00000007968.687.79180190.48290-1.117504.417902.88980HepG2SUB1
    MGST1ENSG00000008394.81174.813701782.63240-0.601603.961702.51020HepG2SUB1
    IL32ENSG00000008517.122457.726501713.078600.520603.247301.93960HepG2SUB1
    MED24ENSG00000008838.13970.491701561.85070-0.686502.730801.53660HepG2SUB1
    SEC62ENSG00000008952.123649.446002438.478000.581604.211202.71500HepG2SUB1
    CD9ENSG00000010278.7383.13260221.467800.790603.984802.52690HepG2SUB1
    NCAPD2ENSG00000010292.81927.284803294.50250-0.773506.818004.97470HepG2SUB1
    SEMA3GENSG00000010319.2910.24200591.030100.622903.630702.24190HepG2SUB1
    IDSENSG00000010404.131151.90320774.675000.572303.489502.12550HepG2SUB1
    HIVEP2ENSG00000010818.42520.252701136.902101.1484010.810308.57030HepG2SUB1
    ANLNENSG00000011426.61560.214802153.09870-0.464702.518801.37260HepG2SUB1
    MAP4K3ENSG00000011566.103166.614702125.076800.575304.024902.55980HepG2SUB1
    BRCA1ENSG00000012048.15618.72470926.17830-0.582003.187301.88960HepG2SUB1
    MBTPS2ENSG00000012174.71094.42880735.257700.573803.027801.76760HepG2SUB1
    MVPENSG00000013364.14826.66730507.798300.703002.665401.48700HepG2SUB1
    CLK1ENSG00000013441.111619.266201184.324600.451202.480501.34580HepG2SUB1
    GPRC5AENSG00000013588.586.3049034.317601.330403.235101.92920HepG2SUB1
    TACC3ENSG00000013810.14379.40010748.81860-0.980903.003001.74530HepG2SUB1
    POLA2ENSG00000014138.4150.49550339.06230-1.171806.707904.87620HepG2SUB1
    SRCIN1ENSG00000017373.11292.79800158.746000.883102.969601.72130HepG2SUB1
    WWTR1ENSG00000018408.103503.864102377.640400.559303.799202.38310HepG2SUB1
    AGPSENSG00000018510.83899.281702798.046300.478703.103401.82460HepG2SUB1
    CYP24A1ENSG00000019186.5827.74840311.778001.408603.442602.09190HepG2SUB1
    SERPINB1ENSG00000021355.82488.609601568.822400.665605.066103.43640HepG2SUB1
    CPS1ENSG00000021826.10953.854401322.51950-0.471402.558201.40400HepG2SUB1
    C8BENSG00000021852.8559.71620337.260400.730703.994702.53450HepG2SUB1
    RB1CC1ENSG00000023287.83434.151401891.163700.860608.234506.23190HepG2SUB1
    BIRC3ENSG00000023445.9194.9183077.817601.324606.076204.31440HepG2SUB1
    GCLMENSG00000023909.5582.47420337.570600.786904.764603.18000HepG2SUB1
    RNASET2ENSG00000026297.114632.707803264.039700.505103.229601.92480HepG2SUB1
    MIPEPENSG00000027001.7154.50440254.43340-0.719602.602601.43990HepG2SUB1
    VEZTENSG00000028203.131152.36710820.562600.489802.624101.45640HepG2SUB1
    HMGB3ENSG00000029993.10575.03000879.48930-0.613003.288501.97210HepG2SUB1
    SARSENSG00000031698.82100.884801202.009300.805406.970905.11280HepG2SUB1
    SLC4A7ENSG00000033867.121867.325601063.315100.812306.693804.86340HepG2SUB1
    UHRF1ENSG00000034063.9421.30300951.31330-1.175102.598001.43580HepG2SUB1
    TMSB10ENSG00000034510.46383.775004020.542700.666905.646603.93830HepG2SUB1
    RNF19AENSG00000034677.73182.556901435.131501.1489013.6109011.15890HepG2SUB1
    TIMP2ENSG00000035862.81913.647601203.449600.669004.814303.22240HepG2SUB1
    TBC1D23ENSG00000036054.81258.83570890.280600.499702.739601.54260HepG2SUB1
    CDH1ENSG00000039068.141705.71270931.245200.873003.310801.98960HepG2SUB1
    DNAH5ENSG00000039139.927.542106.176402.156702.603801.44090HepG2SUB1
    RAI14ENSG00000039560.91310.03480772.688100.761505.766604.04230HepG2SUB1
    PHLPP2ENSG00000040199.14928.73130491.486100.918007.101805.22130HepG2SUB1
    TDP1ENSG00000042088.9336.51570507.23540-0.592002.647801.47400HepG2SUB1
    DSG2ENSG00000046604.87129.725304321.950900.722106.377304.58380HepG2SUB1
    OFD1ENSG00000046651.10738.73950491.564200.587603.151501.86140HepG2SUB1
    CPENSG00000047457.966385.7815035686.167400.895409.934207.75260HepG2SUB1
    SCML1ENSG00000047634.103420.237902139.332300.676805.293303.63170HepG2SUB1
    RSF1ENSG00000048649.91850.828701294.598200.515603.103101.82460HepG2SUB1
    FAM120AENSG00000048828.122210.648501437.243500.621104.368402.84800HepG2SUB1
    RCN1ENSG00000049449.42148.547701145.741400.907006.092004.32910HepG2SUB1
    RFC2ENSG00000049541.6224.58650391.76950-0.802703.782702.37280HepG2SUB1
    HEXBENSG00000049860.92086.413001300.883500.681404.565803.00940HepG2SUB1
    HERPUD1ENSG00000051108.102353.177901286.878600.870607.965805.99440HepG2SUB1
    RAD51ENSG00000051180.12146.15880256.74700-0.812803.151901.86140HepG2SUB1
    POLQENSG00000051341.9336.53430540.58730-0.683803.107501.82650HepG2SUB1
    PIK3CBENSG00000051382.41945.879301059.347500.877107.910305.94770HepG2SUB1
    FNIP2ENSG00000052795.81945.060301180.482300.720305.441803.75660HepG2SUB1
    FSTL4ENSG00000053108.1251.90420104.22050-1.005702.538501.38800HepG2SUB1
    AKR7A2ENSG00000053371.8285.74960458.85330-0.683302.423801.30180HepG2SUB1
    LAMA3ENSG00000053747.1130.1857085.26180-1.498003.690702.29250HepG2SUB1
    ARID4BENSG00000054267.161428.663801014.483100.493802.733301.53830HepG2SUB1
    CYFIP2ENSG00000055163.14887.055301310.38030-0.562903.427402.08100HepG2SUB1
    GINM1ENSG00000055211.8988.12350630.387900.648403.103301.82460HepG2SUB1
    RC3H2ENSG00000056586.111765.699201252.166600.495702.916301.67960HepG2SUB1
    GYG2ENSG00000056998.14319.75450567.03330-0.826504.935003.31800HepG2SUB1
    ATP11BENSG00000058063.111162.57880773.360000.588003.558902.18160HepG2SUB1
    PPP1R12AENSG00000058272.111548.701601128.247700.456902.522701.37590HepG2SUB1
    RASGRF1ENSG00000058335.1147.1531010.511802.165204.072902.59940HepG2SUB1
    PET112ENSG00000059691.7435.12340688.94470-0.663003.622302.23440HepG2SUB1
    MXD1ENSG00000059728.6484.34890239.688901.014806.596004.78190HepG2SUB1
    DNAJC25ENSG00000059769.15466.48460298.525200.643903.157601.86600HepG2SUB1
    YBX3ENSG00000060138.82683.504901730.876500.632504.595403.03370HepG2SUB1
    SNRNP40ENSG00000060688.8446.85710694.71640-0.636603.274901.96120HepG2SUB1
    BCAT1ENSG00000060982.102577.52190929.465801.4714010.294808.08650HepG2SUB1
    CSENSG00000062485.144384.158106099.68270-0.476403.079201.80710HepG2SUB1
    VMP1ENSG00000062716.66181.589203286.053800.911509.610207.45380HepG2SUB1
    CASP8ENSG00000064012.171205.79110760.109300.665604.396102.87130HepG2SUB1
    SLC12A2ENSG00000064651.9633.73700323.052100.972006.853605.00490HepG2SUB1
    BTBD1ENSG00000064726.51705.777301145.390000.574503.701502.30150HepG2SUB1
    UHRF1BP1ENSG00000065060.122445.917101529.553000.677205.247303.59440HepG2SUB1
    MCM10ENSG00000065328.12222.59850456.79870-1.037106.441104.64170HepG2SUB1
    FAM107BENSG00000065809.91343.86860751.709600.838006.961005.10420HepG2SUB1
    MTHFD2ENSG00000065911.75235.984601455.413301.8469027.3624024.17800HepG2SUB1
    PPP2R5AENSG00000066027.71502.29080642.535301.2252013.5676011.12620HepG2SUB1
    ELAVL1ENSG00000066044.9884.551901305.72220-0.561803.328302.00310HepG2SUB1
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    118 RBPs can affect the gene expression of SUB1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    SUB1ENSG00000113387.75691.889604618.623200.301302.205301.49930HepG2ASCC1
    SUB1ENSG00000113387.73450.409905669.71300-0.7165027.5883025.82160HepG2AUH
    SUB1ENSG00000113387.72528.074804281.93800-0.760206.765105.87740HepG2BOP1
    SUB1ENSG00000113387.73931.296406958.53510-0.823802.156601.30510HepG2CCAR1
    SUB1ENSG00000113387.72453.888503931.17020-0.679906.230205.22940HepG2CPSF6
    SUB1ENSG00000113387.73364.941802333.083300.528207.204905.58600HepG2CSTF2
    SUB1ENSG00000113387.73870.371702863.204700.434702.863101.47520HepG2CSTF2T
    SUB1ENSG00000113387.73977.150306299.03380-0.6634029.6219027.68970HepG2DAZAP1
    SUB1ENSG00000113387.71670.213103020.27540-0.8546014.1222012.14080HepG2DDX24
    SUB1ENSG00000113387.73675.423305347.32980-0.540902.983302.33670HepG2DDX3X
    SUB1ENSG00000113387.72160.273003032.48280-0.489305.910004.06960HepG2DDX47
    SUB1ENSG00000113387.72259.350502842.31520-0.331203.141002.09880HepG2DHX30
    SUB1ENSG00000113387.72170.249302946.97110-0.441407.902506.76320HepG2DNAJC21
    SUB1ENSG00000113387.72467.868602920.79350-0.243104.134203.36820HepG2DNAJC2
    SUB1ENSG00000113387.72072.845004415.84490-1.091109.495008.43610HepG2EIF2S1
    SUB1ENSG00000113387.72956.959804880.54630-0.722905.139904.26960HepG2EIF4A3
    SUB1ENSG00000113387.78084.783006214.041200.379608.626407.30120HepG2EIF4G1
    SUB1ENSG00000113387.73780.731305952.71520-0.654906.647205.41180HepG2EIF4G2
    SUB1ENSG00000113387.72655.213404567.34910-0.782505.723004.77970HepG2G3BP1
    SUB1ENSG00000113387.72843.648503764.15830-0.404603.095502.01620HepG2GNB2L1
    SUB1ENSG00000113387.72113.873504456.61080-1.076108.489407.40910HepG2GPKOW
    SUB1ENSG00000113387.71324.211502542.17640-0.940904.607403.18120HepG2GRSF1
    SUB1ENSG00000113387.75586.560803902.345700.517502.850701.45830HepG2HLTF
    SUB1ENSG00000113387.74276.168802975.202200.523202.253301.66630HepG2HNRNPA1
    SUB1ENSG00000113387.77234.557205788.800800.321506.187204.88520HepG2HNRNPA2B1
    SUB1ENSG00000113387.72504.766103309.31090-0.401904.497203.62750HepG2HNRNPC
    SUB1ENSG00000113387.73311.251304803.16180-0.536603.596302.78760HepG2HNRNPF
    SUB1ENSG00000113387.74417.227005738.05820-0.3774012.1639010.84550HepG2HNRNPL
    SUB1ENSG00000113387.73189.519404729.82270-0.568403.715302.88670HepG2IGF2BP1
    SUB1ENSG00000113387.72952.433504642.90430-0.653104.575003.72660HepG2IGF2BP2
    SUB1ENSG00000113387.72231.490703358.01540-0.5896022.8355020.97220HepG2ILF2
    SUB1ENSG00000113387.72884.607604924.40880-0.771606.267705.29000HepG2MAGOH
    SUB1ENSG00000113387.73614.715705069.08560-0.487802.802002.16540HepG2NCBP2
    SUB1ENSG00000113387.75250.902706246.08770-0.250403.132802.32240HepG2NOL12
    SUB1ENSG00000113387.71241.052104515.30480-1.8633018.7508016.92400HepG2PABPC4
    SUB1ENSG00000113387.73278.759804222.88350-0.365105.256204.46220HepG2PCBP1
    SUB1ENSG00000113387.73738.164205962.32690-0.6735010.541009.47800HepG2PUF60
    SUB1ENSG00000113387.74919.298306324.60120-0.362505.551404.61520HepG2PUM2
    SUB1ENSG00000113387.74100.192303525.664800.217703.432902.76430HepG2PUS1
    SUB1ENSG00000113387.73278.981904653.50880-0.505109.876008.79780HepG2QKI
    SUB1ENSG00000113387.72065.593603720.72060-0.849006.472405.41990HepG2RAVER1
    SUB1ENSG00000113387.74822.575305440.86950-0.174001.942701.48850HepG2RBM22
    SUB1ENSG00000113387.75575.463404223.500700.400605.554004.62900HepG2RBM25
    SUB1ENSG00000113387.73325.482505172.99140-0.637404.777503.91280HepG2RPLP0
    SUB1ENSG00000113387.72086.370402751.14910-0.399004.756303.97400HepG2RPS19
    SUB1ENSG00000113387.72153.980402927.63700-0.442704.817604.00750HepG2SAFB2
    SUB1ENSG00000113387.74929.726505716.67640-0.213704.281003.43600HepG2SLBP
    SUB1ENSG00000113387.72770.770103414.17060-0.301206.905105.95970HepG2SMN1
    SUB1ENSG00000113387.73301.4211010383.44210-1.653103.072901.67380HepG2SNRNP200
    SUB1ENSG00000113387.75566.586906145.22810-0.142701.788701.35920HepG2SRFBP1
    SUB1ENSG00000113387.76259.810104669.534700.4227010.569809.77740HepG2SRSF1
    SUB1ENSG00000113387.73308.726904718.67280-0.512103.390502.63080HepG2SRSF7
    SUB1ENSG00000113387.73629.248705335.45390-0.5559018.4728017.39740HepG2SSB
    SUB1ENSG00000113387.7667.449103477.04010-2.3811050.3964046.51300HepG2SUB1
    SUB1ENSG00000113387.75427.418406695.01690-0.302807.793806.83690HepG2SUCLG1
    SUB1ENSG00000113387.72583.876804197.51890-0.7000019.5540018.25650HepG2TAF15
    SUB1ENSG00000113387.73130.443904144.49840-0.404803.029402.27400HepG2TARDBP
    SUB1ENSG00000113387.73149.095503856.56710-0.292402.849502.00130HepG2TIA1
    SUB1ENSG00000113387.72192.829703194.55070-0.542809.644008.80890HepG2TIAL1
    SUB1ENSG00000113387.76445.545604060.131000.666702.577401.96910HepG2U2AF1
    SUB1ENSG00000113387.74795.824206165.24560-0.362402.978502.11190HepG2UBE2L3
    SUB1ENSG00000113387.73062.143202183.610200.487705.559404.47580HepG2UCHL5
    SUB1ENSG00000113387.72424.685703620.57000-0.5784017.9629016.48650HepG2UPF1
    SUB1ENSG00000113387.72737.648203721.48190-0.442909.195307.42060HepG2UTP18
    SUB1ENSG00000113387.73240.301202672.164300.278005.280704.40260HepG2ZC3H8
    SUB1ENSG00000113387.73164.552403981.94190-0.331508.466507.64410HepG2ZNF622
    SUB1ENSG00000113387.76692.150605873.650200.188102.751502.18440K562AGGF1
    SUB1ENSG00000113387.77495.500706111.784700.294302.922102.25070K562AKAP8L
    SUB1ENSG00000113387.77214.179109963.80570-0.465903.689903.03210K562AQR
    SUB1ENSG00000113387.74565.054205851.89170-0.358305.199203.28770K562BCCIP
    SUB1ENSG00000113387.74068.443805654.65590-0.4750013.4761011.31610K562BCLAF1
    SUB1ENSG00000113387.74189.938307044.21080-0.749506.963805.56020K562BOP1
    SUB1ENSG00000113387.77198.0107012704.50330-0.819706.748005.03860K562CNOT7
    SUB1ENSG00000113387.77702.1389010035.78620-0.381806.620804.87430K562CPEB4
    SUB1ENSG00000113387.73168.355107490.13800-1.2413029.0547026.51710K562CPSF6
    SUB1ENSG00000113387.73074.897404289.89810-0.480409.649007.51970K562CSTF2
    SUB1ENSG00000113387.74472.286205425.74250-0.278804.363302.81970K562DDX21
    SUB1ENSG00000113387.72575.549704311.13480-0.7432021.6087017.54620K562DDX24
    SUB1ENSG00000113387.73245.060304068.70710-0.326303.567202.36460K562DDX3X
    SUB1ENSG00000113387.76899.3799010383.61750-0.5898019.9152018.32140K562DDX47
    SUB1ENSG00000113387.78523.648606576.809600.374007.322305.78270K562DKC1
    SUB1ENSG00000113387.73269.648504360.24960-0.415303.486202.45580K562EFTUD2
    SUB1ENSG00000113387.73350.415104469.17700-0.415708.891906.67160K562EIF2S1
    SUB1ENSG00000113387.76258.965407937.97790-0.342805.048404.11800K562EIF2S2
    SUB1ENSG00000113387.73597.135404669.24870-0.376302.553501.56330K562EIF3D
    SUB1ENSG00000113387.72597.612904250.81450-0.7106010.281108.68060K562EIF4A3
    SUB1ENSG00000113387.73206.504003828.10810-0.255602.857901.67990K562EIF4B
    SUB1ENSG00000113387.710080.0936011880.43300-0.237103.241402.22680K562EIF4G2
    SUB1ENSG00000113387.72926.769704003.04130-0.451806.311804.36020K562EXOSC5
    SUB1ENSG00000113387.75021.224107620.80390-0.601909.205107.59680K562FMR1
    SUB1ENSG00000113387.74603.483606459.21720-0.488605.059803.78080K562FTO
    SUB1ENSG00000113387.75333.337604420.671600.270704.105003.38960K562FXR1
    SUB1ENSG00000113387.73319.228904371.36560-0.397203.189201.64340K562GEMIN5
    SUB1ENSG00000113387.75220.746006618.00410-0.342105.573003.98040K562GLRX3
    SUB1ENSG00000113387.73960.149507151.33500-0.8527019.9408017.69430K562GPKOW
    SUB1ENSG00000113387.76412.8933010578.86760-0.7221011.430309.87020K562GRSF1
    SUB1ENSG00000113387.73196.447605807.40000-0.861408.746307.73550K562HNRNPC
    SUB1ENSG00000113387.73762.514505185.01150-0.462703.688902.35180K562HNRNPF
    SUB1ENSG00000113387.76923.493209384.22620-0.438706.440804.76390K562HNRNPL
    SUB1ENSG00000113387.75649.932806575.72250-0.218902.378601.55000K562HNRNPU
    SUB1ENSG00000113387.74860.173306292.30480-0.372602.726001.70900K562IGF2BP2
    SUB1ENSG00000113387.78026.0425011591.28610-0.530302.878301.42880K562ILF2
    SUB1ENSG00000113387.73681.694106106.09510-0.729907.778506.12320K562KRR1
    SUB1ENSG00000113387.74387.753005887.89100-0.424303.284601.65930K562LIN28B
    SUB1ENSG00000113387.78742.632007266.155300.266802.838401.91440K562MBNL1
    SUB1ENSG00000113387.74522.734306980.46020-0.6261011.613909.74130K562METAP2
    SUB1ENSG00000113387.73212.192606957.97490-1.1151072.5948069.62070K562MTPAP
    SUB1ENSG00000113387.77425.188605093.044200.543803.379802.38590K562NAA15
    SUB1ENSG00000113387.74833.053607730.89760-0.6777048.4386046.00370K562NSUN2
    SUB1ENSG00000113387.78364.1134012205.27100-0.545203.252001.89720K562PABPC1
    SUB1ENSG00000113387.73874.586205900.21390-0.606706.756703.98260K562PABPC4
    SUB1ENSG00000113387.73485.455205091.85190-0.546806.235504.98350K562PCBP3
    SUB1ENSG00000113387.73030.434303905.61880-0.366004.601803.56720K562POLR2G
    SUB1ENSG00000113387.75778.099204243.006000.445405.395904.34470K562PRPF8
    SUB1ENSG00000113387.73794.455405206.66320-0.456502.896401.96760K562PSIP1
    SUB1ENSG00000113387.711795.6410013509.20780-0.195702.388401.49560K562PUM2
    SUB1ENSG00000113387.79855.085806061.318300.7011011.6358010.57060K562PUS1
    SUB1ENSG00000113387.77212.708405905.754600.288304.159603.44920K562RBM15
    SUB1ENSG00000113387.73424.090904749.05970-0.471903.494602.38430K562RCC2
    SUB1ENSG00000113387.74249.889805668.36190-0.415503.939601.84210K562RECQL
    SUB1ENSG00000113387.72838.066103480.01710-0.294202.638901.58390K562SAFB
    SUB1ENSG00000113387.76733.0334011571.50130-0.781206.296603.90670K562SBDS
    SUB1ENSG00000113387.75329.403107628.47850-0.5174013.3656011.68540K562SF3A3
    SUB1ENSG00000113387.75434.596806800.82170-0.323502.319501.43750K562SF3B1
    SUB1ENSG00000113387.74326.169609084.95900-1.070406.499804.15640K562SFPQ
    SUB1ENSG00000113387.76973.1244011884.34740-0.769206.530403.78550K562SMN1
    SUB1ENSG00000113387.72761.005304502.12100-0.705404.614003.19430K562SRFBP1
    SUB1ENSG00000113387.73230.767304236.22200-0.390903.577601.68320K562SRP68
    SUB1ENSG00000113387.75994.400607815.54600-0.3827012.3202010.52710K562SRPK2
    SUB1ENSG00000113387.72339.736403322.30240-0.505802.416901.44310K562SRSF4
    SUB1ENSG00000113387.74407.201605949.48740-0.432905.035803.54030K562SRSF5
    SUB1ENSG00000113387.74118.774504842.08720-0.233403.166701.90860K562SRSF7
    SUB1ENSG00000113387.7442.247604398.36540-3.3140032.2826027.91630K562SUB1
    SUB1ENSG00000113387.79249.9344011309.96040-0.290103.716701.97840K562SUCLG1
    SUB1ENSG00000113387.72362.059204109.10940-0.798807.848606.07880K562SUPV3L1
    SUB1ENSG00000113387.74635.472303917.444700.242702.484701.70850K562SYNCRIP
    SUB1ENSG00000113387.74259.393406376.77740-0.582207.970106.69170K562TARDBP
    SUB1ENSG00000113387.74369.059506150.98270-0.493507.819806.33700K562TIA1
    SUB1ENSG00000113387.72784.210405008.10240-0.847004.475903.26490K562TIAL1
    SUB1ENSG00000113387.74881.840006034.68890-0.305902.983801.84090K562TRA2A
    SUB1ENSG00000113387.74102.308705318.95930-0.374702.672001.74570K562TRIM56
    SUB1ENSG00000113387.73152.992904348.50470-0.463803.911002.67960K562UCHL5
    SUB1ENSG00000113387.74400.210408197.23760-0.8976049.8032047.27060K562UPF1
    SUB1ENSG00000113387.74557.763607014.11250-0.6219012.3764010.47640K562WDR3
    SUB1ENSG00000113387.76052.343307293.89630-0.269205.788804.61280K562WDR43
    SUB1ENSG00000113387.79277.9453011802.85000-0.347302.697201.42570K562WRN
    SUB1ENSG00000113387.73166.444904427.23360-0.483503.837002.32850K562XRN2
    SUB1ENSG00000113387.77875.3302011225.75050-0.511403.802302.76030K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    45 alternative splicing events after Knockdown/Knockout SUB1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 45 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEA1CFENSG00000148584.10chr10-5262379252623840526196015261974552645340526454350.080000.000010.02562includedHepG2SUB1
    SESAT1ENSG00000130066.12chrX+2380241023802520238018842380200023803444238035460.058000.000030.08563includedHepG2SUB1
    SEBPIFB2ENSG00000078898.6chr20+3159608331596184315954053159556631596346315964890.074000.000010.02562includedHepG2SUB1
    SEMRPL22ENSG00000082515.12chr5+1543303801543304981543207761543208251543359301543359960.131000.000000.01539includedHepG2SUB1
    SEMFFENSG00000168958.15chr2+2282074602282075352282050072282050962282119412282121000.244000.000000.01539includedHepG2SUB1
    SEGPR126ENSG00000112414.10chr6+1427620441427620901427593481427595011427644731427674030.137000.000000.01539includedHepG2SUB1
    SEASPHENSG00000198363.11chr8-6255650362556560625559446255599262557158625571910.101000.000000.01539includedHepG2SUB1
    SEZFAND1ENSG00000104231.6chr8-826294838262952382627221826273498263041682630459-0.290000.000000.01539excludedHepG2SUB1
    SEMFFENSG00000168958.15chr2+228211941228212100228205007228205096228220392228220477-0.179000.000030.07696excludedHepG2SUB1
    A5SSENY2ENSG00000120533.8chr8+1103465521103467031103465521103466311103483561103484330.083000.000080.08001longerHepG2SUB1
    A5SSRNASEK-C17orf49ENSG00000161939.14chr17+6915978691609669159786916076691698469170610.104000.000010.01552longerHepG2SUB1
    A5SSPPP4CENSG00000149923.9chr16+3009406630094284300940663009416830094714300948880.070000.000010.01552longerHepG2SUB1
    A5SSZNF561ENSG00000171469.6chr19-9731591973190797318379731907973010797302580.343000.000040.04633longerHepG2SUB1
    A5SSGPALPP1ENSG00000133114.13chr13+4558292945583135455829294558301445589086455892180.070000.000040.04633longerHepG2SUB1
    A5SSBCL2L2-PABPN1ENSG00000258643.1chr14+237933462379353723793346237934982379445523794538-0.102000.000010.01552shorterHepG2SUB1
    A5SSNOP56ENSG00000101361.10chr20+263657926368602636579263668026370462637195-0.285000.000000.00000shorterHepG2SUB1
    MXESUB1ENSG00000113387.7chr5+32588617325886903259166832591791325711963257128032599066325991750.098000.000000.000001includedHepG2SUB1
    MXEMFFENSG00000168958.15chr2+2282074602282075352282119412282121002282050072282050962282203922282204770.277000.000020.007571includedHepG2SUB1
    MXEMFFENSG00000168958.15chr2+2282074602282075352282119412282121002282050072282050962282172292282172890.143000.000050.012501includedHepG2SUB1
    MXEYWHAEENSG00000108953.12chr17-125750412576411264385126459212478331248793126519512653020.113000.000060.015291includedHepG2SUB1
    MXETTC8ENSG00000165533.14chr14+89307768893079018931014989310194893073808930754089319314893194000.406000.000350.068071includedHepG2SUB1
    MXEAMD1ENSG00000123505.10chr6+111210059111210186111211477111211559111208707111208794111213363111213406-0.143000.000430.076372includedHepG2SUB1
    MXEZFAS1ENSG00000177410.8chr20+4789564047895745478970214789710747894714478952534790558147905797-0.083000.000000.001052includedHepG2SUB1
    MXERPL9ENSG00000163682.11chr4-3945648339456564394580253945815839456152394562693945920539459301-0.093000.000350.068072includedHepG2SUB1
    MXECCDC58ENSG00000160124.5chr3-122087022122087169122090521122090647122081814122081874122102020122102078-0.169000.000050.012502includedHepG2SUB1
    MXESENP3-EIF4A1ENSG00000265500.1chr17+74778637477996747843674785767477577747762674798417480010-0.095000.000480.081862includedHepG2SUB1
    MXEALBENSG00000163631.12chr4+7427234574272478742750717427514074270017742701237427602874276126-0.165000.000020.007962includedHepG2SUB1
    MXETAF13ENSG00000197780.5chr1-109608756109608854109617608109617687109607054109607315109618542109618593-0.256000.000030.009212includedHepG2SUB1
    MXEFAM162AENSG00000114023.11chr3+122121606122121729122123104122123210122103044122103146122126127122126811-0.128000.000010.003092includedHepG2SUB1
    MXESOAT2ENSG00000167780.7chr12+5351686453517000535170005351710853515086535151855351751153517657-0.107000.000270.056212includedHepG2SUB1
    MXEAFPENSG00000081051.3chr4+7431070974310839743133307431339374309063743091617431505174315184-0.111000.000010.004332includedHepG2SUB1
    MXEAFPENSG00000081051.3chr4+7431070974310839743131787431339374309063743091617431505174315184-0.113000.000010.003212includedHepG2SUB1
    MXEAFPENSG00000081051.3chr4+7430906374309161743131787431339374308012743081457431505174315184-0.090000.000200.044282includedHepG2SUB1
    MXEDCAF13ENSG00000164934.9chr8+104432491104432691104433202104433310104427639104427744104438283104438373-0.137000.000110.024832includedHepG2SUB1
    MXEUQCC1ENSG00000101019.17chr20-3397184033971936339818943398199933969720339698283399974233999776-0.153000.000420.076372includedHepG2SUB1
    MXEPIBF1ENSG00000083535.11chr13+7353941173539542735477287354781373505302735054057357295973573133-0.310000.000550.087842includedHepG2SUB1
    MXEOFD1ENSG00000046651.10chrX+1378186313781974137852451378545513780462137805631378617213786343-0.358000.000500.081952includedHepG2SUB1
    MXESNX5ENSG00000089006.12chr20-1793323017933354179360081793611917932143179322391793757617937681-0.112000.000040.010122includedHepG2SUB1
    MXEGCSHENSG00000140905.5chr16-8111806781118199811212058112126981115565811165688112420581124285-0.146000.000020.007962includedHepG2SUB1
    MXESERPINA1ENSG00000197249.8chr14-9484580094845948948489289484957894844712948449779485489694855000-0.307000.000000.000002includedHepG2SUB1
    MXESERPINA1ENSG00000197249.8chr14-9484720794847478948489289484957894845800948459489485489694855000-0.258000.000000.000002includedHepG2SUB1
    MXENAP1L1ENSG00000187109.9chr12-7645391776454059764679827646801976453577764536587647834676478465-0.075000.000010.003212includedHepG2SUB1
    MXEACP1ENSG00000143727.11chr2+272036272150275139275201271865271939276979277085-0.137000.000000.001422includedHepG2SUB1
    MXEACLYENSG00000131473.12chr17-4006867240068795400699674007015340066474400665374007513240075215-0.168000.000000.001052includedHepG2SUB1
    MXEHAUS1ENSG00000152240.8chr18+4369814643698282436998914370002643685159436853344370243243702556-0.308000.000000.000342includedHepG2SUB1





    14 RBPs can affect the splicing of SUB1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SESUB1ENSG00000113387.7chr5+325711963257128032531923325320223258861732588690-0.473000.002220.03966excludedHepG2U2AF1
    SESUB1ENSG00000113387.7chr5+3256018632560255325319233253202232571196325712800.091000.003970.07431includedHepG2SRSF1
    SESUB1ENSG00000113387.7chr5+325711963257128032531923325320223258861732588690-0.415000.002370.06455excludedK562UTP18
    SESUB1ENSG00000113387.7chr5+325367433253680132531954325320223257119632571280-0.098000.000260.03467excludedHepG2TAF15
    MXESUB1ENSG00000113387.7chr5+3258861732588690325916683259179132585604325857313259906632599175-0.094000.000350.009082includedHepG2U2AF1
    MXESUB1ENSG00000113387.7chr5+32588617325886903259166832591791325856043258573132599066325991750.088000.000760.081411includedHepG2FUS
    MXESUB1ENSG00000113387.7chr5+3258861732588690325916683259172332571196325712803259906632599175-0.414000.000750.018472includedHepG2SRSF1
    MXESUB1ENSG00000113387.7chr5+3258861732588690325916683259179132585604325857313259906632599175-0.082000.000370.015722includedK562RBM15
    MXESUB1ENSG00000113387.7chr5+3258861732588690325916683259179132585604325857313259906632599175-0.071000.007580.072482includedK562DROSHA
    MXESUB1ENSG00000113387.7chr5+3258861732588690325916683259179132585604325857313259906632599175-0.069000.002240.038042includedK562PUS1
    MXESUB1ENSG00000113387.7chr5+3258861732588690325916683259172332571196325712803259906632599175-0.377000.007590.050632includedK562AQR
    MXESUB1ENSG00000113387.7chr5+3258861732588690325916683259179132585604325857313259906632599175-0.098000.000110.030182includedK562SMNDC1
    MXESUB1ENSG00000113387.7chr5+32588617325886903259166832591791325856043258573132599066325991750.090000.000480.014771includedHepG2DDX55
    MXESUB1ENSG00000113387.7chr5+3259467632594978325972893259740832591668325917913259906632599175-0.762000.009650.052322includedHepG2U2AF2
    MXESUB1ENSG00000113387.7chr5+3259467632594978325972893259740832591668325917913259906632599175-0.713000.000000.000052includedK562HNRNPM
    MXESUB1ENSG00000113387.7chr5+3259467632594721325972893259740832591668325917913259906632599175-0.725000.000010.004322includedK562HNRNPM
    MXESUB1ENSG00000113387.7chr5+32588617325886903259166832591791325711963257128032599066325991750.098000.000000.000001includedHepG2SUB1

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The SUB1 protein affects to its own RNA splicing after knockdown/knockout.

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    MXESUB1ENSG00000113387.7chr5+32588617325886903259166832591791325711963257128032599066325991750.098000.000000.000001includedHepG2SUB1