ATP11B

General Information

Gene Name       : ATP11B
Gene ID             : ENSG00000058063.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATP11B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATP11BENSG00000058063.1536.4627.2631.86ENCSR000AEF
HepG2ATP11BENSG00000058063.154.957.836.39ENCSR985KAT
K562ATP11BENSG00000058063.1523.8827.0725.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATP11B is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATP11B RNA is bound by 22 proteins.  







eCLIP assay for ATP11B is not avaliable on ENCORE database.





22 proteins are bound to ATP11B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3182638718182638755+3'-UTR5.020736.31097K562FAM120A
chr3182637358182637394+3'-UTR3.038093.31830K562KHSRP
chr3182639311182639379+3'-UTR3.608797.11596K562PUM2
chr3182636264182636348+3'-UTR3.333587.35556K562PUM2
chr3182637166182637198+3'-UTR4.270074.14103K562KHSRP
chr3182639050182639109+3'-UTR3.169365.27165K562FAM120A
chr3182638394182638451+3'-UTR4.839309.12746K562FAM120A
chr3182631673182631779+3'-UTR,CDS4.251048.98198K562SRSF1
chr3182637534182637597+3'-UTR4.699885.62258K562KHSRP
chr3182638456182638539+3'-UTR4.4412914.24882K562FAM120A
chr3182637276182637358+3'-UTR3.8867214.90446K562KHSRP
chr3182631746182631784+3'-UTR,CDS,intron-Proximal4.423803.66349K562LIN28B
chr3182637259182637276+3'-UTR3.342027.68575K562KHSRP
chr3182637210182637259+3'-UTR3.676039.10611K562KHSRP
chr3182511468182511566+5'-UTR,CDS4.049754.17587HepG2DDX3X
chr3182511326182511420+5'-UTR3.312796.27275HepG2DDX3X
chr3182603737182603788+5'-UTR,CDS,intron-Distal,intron-Proximal4.433875.48475K562TIA1
chr3182511432182511496+5'-UTR4.209293.90626K562XRN2
chr3182590284182590327+CDS,intron-Proximal3.218326.28688K562UCHL5
chr3182563241182563296+CDS,intron-Proximal3.370769.24221K562DDX24
chr3182538099182538146+CDS3.559403.95301K562ZNF622
chr3182586978182587061+CDS,intron-Proximal4.816195.16342K562SF3B4
chr3182591599182591622+CDS,intron-Proximal4.252116.14226K562ZNF622
chr3182590302182590326+CDS,intron-Proximal4.261623.02457HepG2BCLAF1
chr3182587027182587120+CDS,intron-Proximal3.5185911.06697K562EFTUD2
chr3182586866182586940+CDS,intron-Proximal3.638328.32162K562ZNF622
chr3182586895182586948+CDS,intron-Proximal3.469143.87469HepG2BCLAF1
chr3182590199182590326+CDS,intron-Proximal3.1595713.51341K562ZNF622
chr3182554858182554883+CDS,intron-Proximal4.468965.23082K562DDX24
chr3182566262182566342+CDS,intron-Proximal4.3944217.30887K562DDX24
chr3182583407182583480+CDS5.2553010.98769K562IGF2BP1
chr3182591599182591675+CDS,intron-Proximal4.099415.94293HepG2BCLAF1
chr3182563296182563311+CDS,intron-Proximal4.239255.05122K562DDX24
chr3182559894182559910+CDS3.591146.00726K562YBX3
chr3182586978182587027+CDS,intron-Proximal3.7482710.17627K562EFTUD2
chr3182553826182553864+CDS4.054103.38968HepG2BCLAF1
chr3182597383182597418+CDS4.094593.43980K562ZNF622
chr3182554914182554963+CDS,intron-Proximal3.028513.67408K562DDX24
chr3182559865182559911+CDS,intron-Proximal3.990507.97611K562DDX24
chr3182590213182590284+CDS3.315107.58409K562UCHL5
chr3182586996182587092+CDS,intron-Proximal3.149385.00751HepG2BCLAF1
chr3182545982182546034+CDS,intron-Proximal3.648043.86423K562GPKOW
chr3182591595182591662+CDS,intron-Proximal4.064917.43300K562BUD13
chr3182591738182591810+CDS,intron-Proximal3.169114.26492HepG2BCLAF1
chr3182554152182554259+CDS,intron-Proximal3.6683115.72591K562DDX24
chr3182542126182542194+intron-Distal3.342926.83596K562EXOSC5
chr3182558080182558157+intron-Distal4.178853.47525K562MATR3
chr3182635522182635624+intron-Distal4.068534.54401K562KHSRP
chr3182631535182631599+intron-Distal,intron-Proximal3.950013.66668K562KHSRP
chr3182594131182594201+intron-Distal4.247164.07352K562KHSRP
chr3182633041182633128+intron-Distal4.488775.62258K562KHSRP
chr3182539670182539741+intron-Distal6.3829811.89523K562QKI
chr3182563452182563544+intron-Distal4.223514.10688K562KHSRP
chr3182545426182545534+intron-Distal5.0535016.86474K562QKI
chr3182633911182634024+intron-Distal3.207303.28806K562KHSRP
chr3182541659182541731+intron-Distal4.5955310.29529K562EXOSC5
chr3182590384182590462+intron-Distal,intron-Proximal4.941084.38664K562QKI
chr3182605548182605644+intron-Distal,intron-Proximal4.477584.10688K562KHSRP
chr3182541918182541949+intron-Distal4.375503.89085K562EXOSC5
chr3182526118182526173+intron-Distal5.575467.93703K562XRCC6
chr3182615247182615293+intron-Proximal4.100584.36481K562EFTUD2
chr3182547402182547453+intron-Proximal4.969434.90235K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATP11B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATP11B is not available on ENCORE database.

  • 87 RBPs can affect the levels of ATP11B.  








The Knockdown/knockout RNA-Seq assay for ATP11B is not available on ENCORE database.





87 RBPs can affect the gene expression of ATP11B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATP11BENSG00000058063.11622.73190864.45090-0.473206.094105.26260HepG2ACO1
ATP11BENSG00000058063.11829.757301196.11540-0.527604.453303.46660HepG2ASCC1
ATP11BENSG00000058063.11388.65240534.27570-0.459102.287501.43930HepG2BCCIP
ATP11BENSG00000058063.11825.83390552.421200.580005.212704.42320HepG2BOP1
ATP11BENSG00000058063.11731.582901096.86870-0.584304.083002.88620HepG2CCAR1
ATP11BENSG00000058063.11535.51110864.25310-0.6905012.2277011.03040HepG2CKAP4
ATP11BENSG00000058063.11562.114001046.20280-0.896206.752405.55890HepG2CNOT7
ATP11BENSG00000058063.11792.95360507.137800.644805.783004.82240HepG2CPSF6
ATP11BENSG00000058063.11227.08310330.00650-0.539302.933901.82890HepG2CSTF2
ATP11BENSG00000058063.11644.94880865.48230-0.424304.676603.88000HepG2CELF1
ATP11BENSG00000058063.11468.20150666.57340-0.509604.020303.21670HepG2DDX21
ATP11BENSG00000058063.11870.57340575.897200.596102.770001.79060HepG2DDX59
ATP11BENSG00000058063.11505.85920714.77510-0.498806.343905.41500HepG2DNAJC2
ATP11BENSG00000058063.11516.60980788.86450-0.610704.879903.68650HepG2EEF2
ATP11BENSG00000058063.11500.89840657.61010-0.392702.358301.33740HepG2EFTUD2
ATP11BENSG00000058063.11753.507701230.43330-0.707505.347604.41290HepG2EIF4B
ATP11BENSG00000058063.111128.61550918.118000.297702.603001.78750HepG2EIF4G1
ATP11BENSG00000058063.11931.33400714.588700.382102.995802.18020HepG2FUBP3
ATP11BENSG00000058063.11916.639501275.04930-0.476103.866503.05780HepG2FXR1
ATP11BENSG00000058063.11914.174501182.82050-0.371702.325401.71310HepG2G3BP1
ATP11BENSG00000058063.11607.85200968.42160-0.671904.529303.11580HepG2GRSF1
ATP11BENSG00000058063.11352.45720728.09010-1.0467013.8701012.59920HepG2HNRNPA1
ATP11BENSG00000058063.11706.20720551.850200.355702.915802.18070HepG2HNRNPF
ATP11BENSG00000058063.11963.921701197.65380-0.313202.057101.44940HepG2HNRNPK
ATP11BENSG00000058063.11694.63060847.88690-0.287601.966101.38590HepG2HNRNPL
ATP11BENSG00000058063.111075.31200548.583400.9709012.7088011.48900HepG2HNRNPLL
ATP11BENSG00000058063.11556.77110804.49970-0.531006.925006.00310HepG2HNRNPU
ATP11BENSG00000058063.11691.65560543.411300.347902.332801.66590HepG2IGF2BP1
ATP11BENSG00000058063.11647.52650821.77190-0.343803.815002.96780HepG2ILF2
ATP11BENSG00000058063.11840.285301157.72590-0.462302.899302.04810HepG2LARP4
ATP11BENSG00000058063.11949.233101275.49420-0.426203.068502.37780HepG2MAGOH
ATP11BENSG00000058063.11808.003001282.64080-0.666706.009005.10550HepG2MATR3
ATP11BENSG00000058063.111048.89700559.573300.906406.933305.36440HepG2MTPAP
ATP11BENSG00000058063.11967.715801312.86060-0.440103.177902.50190HepG2NCBP2
ATP11BENSG00000058063.11323.49440482.39150-0.576502.282401.30180HepG2NONO
ATP11BENSG00000058063.11761.01880486.453900.645504.360303.42660HepG2NSUN2
ATP11BENSG00000058063.11614.62250796.33270-0.373703.582502.63050HepG2PARN
ATP11BENSG00000058063.11873.644501107.04740-0.341603.878803.18590HepG2PCBP1
ATP11BENSG00000058063.11614.843801126.43380-0.8735019.0130017.82100HepG2PTBP1
ATP11BENSG00000058063.11625.97190935.14190-0.5791010.259209.26820HepG2PUM1
ATP11BENSG00000058063.11483.47240880.49780-0.8649017.5371016.22340HepG2PUS1
ATP11BENSG00000058063.111573.143401220.016000.366703.920003.19390HepG2QKI
ATP11BENSG00000058063.11591.052101067.50860-0.8529015.2949014.27700HepG2RBM22
ATP11BENSG00000058063.111442.912101107.220200.381903.555502.79810HepG2RBM25
ATP11BENSG00000058063.11471.11980690.02310-0.550603.293302.13390HepG2RCC2
ATP11BENSG00000058063.11848.745301253.63630-0.562708.952608.08120HepG2NELFE
ATP11BENSG00000058063.11342.62470623.12260-0.862909.916108.84060HepG2RPS19
ATP11BENSG00000058063.11449.26530625.37200-0.477103.111502.11140HepG2SERBP1
ATP11BENSG00000058063.111073.95500542.965600.9839014.2539012.78350HepG2SF3B1
ATP11BENSG00000058063.111227.76830844.616500.539609.436308.26290HepG2SLBP
ATP11BENSG00000058063.11483.01010835.51420-0.7906015.3845014.05520HepG2SMN1
ATP11BENSG00000058063.11499.42830842.94220-0.755204.009002.83920HepG2SMNDC1
ATP11BENSG00000058063.11918.22830604.152900.603803.448402.57060HepG2SNRNP70
ATP11BENSG00000058063.111048.921001224.14300-0.222902.037301.61430HepG2SRSF1
ATP11BENSG00000058063.11680.99280542.186900.328702.531501.86340HepG2SRSF7
ATP11BENSG00000058063.11671.26320913.49980-0.444502.587801.52850HepG2STIP1
ATP11BENSG00000058063.111162.57880773.360000.588003.558902.18160HepG2SUB1
ATP11BENSG00000058063.11766.90550534.807500.519904.045203.18850HepG2TARDBP
ATP11BENSG00000058063.11380.87710781.76900-1.0374017.0932016.04270HepG2TIAL1
ATP11BENSG00000058063.11505.36760788.70670-0.642209.589408.63700HepG2TRIM56
ATP11BENSG00000058063.11198.68070308.90630-0.636703.540902.68510HepG2UCHL5
ATP11BENSG00000058063.11862.433901027.01690-0.252002.295601.73890HepG2UTP3
ATP11BENSG00000058063.11361.41820514.76730-0.510302.921402.17580HepG2XRN2
ATP11BENSG00000058063.111338.486801169.930400.194101.995701.51050HepG2ZNF622
ATP11BENSG00000058063.114619.134905529.99580-0.259704.523603.83000K562AGGF1
ATP11BENSG00000058063.114768.096005754.15820-0.271202.491701.87140K562AKAP8L
ATP11BENSG00000058063.114968.644906037.39660-0.281104.001002.88480K562ATP5C1
ATP11BENSG00000058063.113555.390504495.50720-0.338505.507803.90450K562CPEB4
ATP11BENSG00000058063.113191.305002689.284400.246802.296801.57560K562CPSF6
ATP11BENSG00000058063.119185.685107085.831500.374406.145204.70010K562CELF1
ATP11BENSG00000058063.116083.922004651.605000.387208.579507.51230K562DDX47
ATP11BENSG00000058063.115130.450406192.21980-0.271404.085402.99120K562DKC1
ATP11BENSG00000058063.111988.026001255.176000.663302.948501.90840K562EIF3A
ATP11BENSG00000058063.113342.604202427.045000.461703.934102.67200K562EIF3D
ATP11BENSG00000058063.111972.699002610.12380-0.403903.631302.27670K562EIF4B
ATP11BENSG00000058063.112760.781303308.25780-0.261002.072901.33450K562FIP1L1
ATP11BENSG00000058063.112731.014902047.193700.415703.571702.26730K562FKBP4
ATP11BENSG00000058063.113060.700402460.661100.314703.614102.05170K562FUS
ATP11BENSG00000058063.114763.300303117.620900.611404.792503.80300K562G3BP2
ATP11BENSG00000058063.113021.277804040.19580-0.419303.962803.06060K562GRSF1
ATP11BENSG00000058063.113425.124004203.82390-0.295502.978701.87790K562HNRNPL
ATP11BENSG00000058063.112710.671803173.44280-0.227402.139301.35530K562HNRNPU
ATP11BENSG00000058063.112848.758502192.447300.377702.420101.55400K562KRR1
ATP11BENSG00000058063.111926.620302506.25840-0.379504.136703.05250K562METAP2
ATP11BENSG00000058063.112570.722303007.22940-0.226303.240402.36670K562MTPAP
ATP11BENSG00000058063.113849.894003341.307200.204304.004703.12530K562NSUN2
ATP11BENSG00000058063.114228.789503245.207100.381803.154802.26600K562PCBP3
ATP11BENSG00000058063.112473.669603755.46490-0.602308.309906.70820K562PPIG
ATP11BENSG00000058063.111527.453602113.87440-0.468805.202703.90960K562PSIP1
ATP11BENSG00000058063.112703.220903738.89970-0.467906.100405.14660K562PTBP1
ATP11BENSG00000058063.112233.079603585.93210-0.683309.570307.86140K562RBM22
ATP11BENSG00000058063.113244.120802255.349300.524404.136902.50750K562RRP9
ATP11BENSG00000058063.112456.882503665.20920-0.577107.532906.37450K562SRSF1
ATP11BENSG00000058063.113394.590502803.809200.275703.403002.09620K562SRSF7
ATP11BENSG00000058063.113594.836302871.004600.324302.619901.37980K562SSB
ATP11BENSG00000058063.113079.094502496.709300.302403.401902.49290K562SYNCRIP
ATP11BENSG00000058063.112965.897103578.40540-0.270802.520101.74380K562TIA1
ATP11BENSG00000058063.114524.638503121.273600.535609.916208.39380K562U2AF2
ATP11BENSG00000058063.114474.148703152.416800.5051015.9289014.12650K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATP11B is not available on ENCORE database.





4 RBPs can affect the splicing of ATP11B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATP11BENSG00000058063.11chr3+182603738182603798182602540182602686182605373182605501-0.452000.000000.00001excludedHepG2U2AF1
SEATP11BENSG00000058063.11chr3+182603738182603798182602540182602686182605373182605501-0.398000.000000.00000excludedHepG2U2AF2
SEATP11BENSG00000058063.11chr3+182598666182598769182597283182597437182602540182602686-0.055000.006320.08649excludedK562U2AF2
SEATP11BENSG00000058063.11chr3+1826202681826203541826163941826165601826316481826317820.052000.000040.00262includedK562HNRNPU
SEATP11BENSG00000058063.11chr3+1825623011825623811825598621825599101825632451825633100.106000.001000.03754includedK562HNRNPU
A3SSATP11BENSG00000058063.11chr3+1825548391825549621825548581825549621825541751825542580.055000.000070.00062longerK562AQR
A3SSATP11BENSG00000058063.11chr3+182583243182583486182583446182583486182577028182577147-0.065000.000510.00381shorterK562AQR
A5SSATP11BENSG00000058063.11chr3+182598666182598769182598666182598735182602540182602686-0.078000.000060.00156shorterK562AQR
MXEATP11BENSG00000058063.11chr3+1826144691826145531826150901826151941826071971826073361826163941826165600.061000.000350.003681includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATP11B is not avaliable on ENCORE database.