ATP11B

General Information

Gene Name : ATP11B
Gene ID : ENSG00000058063.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ATP11B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ATP11B	ENSG00000058063.15	36.46	27.26	31.86	ENCSR000AEF
HepG2	ATP11B	ENSG00000058063.15	4.95	7.83	6.39	ENCSR985KAT
K562	ATP11B	ENSG00000058063.15	23.88	27.07	25.48	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ATP11B is not avaliable on ENCORE database.

Proteins bound to RNA

ATP11B RNA is bound by 22 proteins.

CanvasJS.com

eCLIP assay for ATP11B is not avaliable on ENCORE database.

22 proteins are bound to ATP11B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	182566262	182566342	+	CDS,intron-Proximal	4.39442	17.30887	K562	DDX24
chr3	182545426	182545534	+	intron-Distal	5.05350	16.86474	K562	QKI
chr3	182554152	182554259	+	CDS,intron-Proximal	3.66831	15.72591	K562	DDX24
chr3	182637276	182637358	+	3'-UTR	3.88672	14.90446	K562	KHSRP
chr3	182638456	182638539	+	3'-UTR	4.44129	14.24882	K562	FAM120A
chr3	182590199	182590326	+	CDS,intron-Proximal	3.15957	13.51341	K562	ZNF622
chr3	182539670	182539741	+	intron-Distal	6.38298	11.89523	K562	QKI
chr3	182587027	182587120	+	CDS,intron-Proximal	3.51859	11.06697	K562	EFTUD2
chr3	182583407	182583480	+	CDS	5.25530	10.98769	K562	IGF2BP1
chr3	182541659	182541731	+	intron-Distal	4.59553	10.29529	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 62 entries

eCLIP assay for ATP11B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ATP11B is not available on ENCORE database.
87 RBPs can affect the levels of ATP11B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ATP11B is not available on ENCORE database.

87 RBPs can affect the gene expression of ATP11B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ATP11B	ENSG00000058063.11	614.84380	1126.43380	-0.87350	19.01300	17.82100	HepG2	PTBP1
ATP11B	ENSG00000058063.11	483.47240	880.49780	-0.86490	17.53710	16.22340	HepG2	PUS1
ATP11B	ENSG00000058063.11	380.87710	781.76900	-1.03740	17.09320	16.04270	HepG2	TIAL1
ATP11B	ENSG00000058063.11	591.05210	1067.50860	-0.85290	15.29490	14.27700	HepG2	RBM22
ATP11B	ENSG00000058063.11	4474.14870	3152.41680	0.50510	15.92890	14.12650	K562	WDR43
ATP11B	ENSG00000058063.11	483.01010	835.51420	-0.79060	15.38450	14.05520	HepG2	SMN1
ATP11B	ENSG00000058063.11	1073.95500	542.96560	0.98390	14.25390	12.78350	HepG2	SF3B1
ATP11B	ENSG00000058063.11	352.45720	728.09010	-1.04670	13.87010	12.59920	HepG2	HNRNPA1
ATP11B	ENSG00000058063.11	1075.31200	548.58340	0.97090	12.70880	11.48900	HepG2	HNRNPLL
ATP11B	ENSG00000058063.11	535.51110	864.25310	-0.69050	12.22770	11.03040	HepG2	CKAP4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 99 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ATP11B is not available on ENCORE database.

4 RBPs can affect the splicing of ATP11B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ATP11B	ENSG00000058063.11	chr3	+	182603738	182603798			182602540	182602686	182605373	182605501	-0.45200	0.00000	0.00001	excluded	HepG2	U2AF1
SE	ATP11B	ENSG00000058063.11	chr3	+	182603738	182603798			182602540	182602686	182605373	182605501	-0.39800	0.00000	0.00000	excluded	HepG2	U2AF2
SE	ATP11B	ENSG00000058063.11	chr3	+	182620268	182620354			182616394	182616560	182631648	182631782	0.05200	0.00004	0.00262	included	K562	HNRNPU
A5SS	ATP11B	ENSG00000058063.11	chr3	+	182598666	182598769			182598666	182598735	182602540	182602686	-0.07800	0.00006	0.00156	shorter	K562	AQR
A3SS	ATP11B	ENSG00000058063.11	chr3	+	182554839	182554962			182554858	182554962	182554175	182554258	0.05500	0.00007	0.00062	longer	K562	AQR
MXE	ATP11B	ENSG00000058063.11	chr3	+	182614469	182614553	182615090	182615194	182607197	182607336	182616394	182616560	0.06100	0.00035	0.00368	1included	K562	AQR
A3SS	ATP11B	ENSG00000058063.11	chr3	+	182583243	182583486			182583446	182583486	182577028	182577147	-0.06500	0.00051	0.00381	shorter	K562	AQR
SE	ATP11B	ENSG00000058063.11	chr3	+	182562301	182562381			182559862	182559910	182563245	182563310	0.10600	0.00100	0.03754	included	K562	HNRNPU
SE	ATP11B	ENSG00000058063.11	chr3	+	182598666	182598769			182597283	182597437	182602540	182602686	-0.05500	0.00632	0.08649	excluded	K562	U2AF2

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ATP11B

General Information

Functions

Localization

Domains (AlphaFold: ATP11B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ATP11B is not avaliable on ENCORE database.

22 proteins are bound to ATP11B RNA:

eCLIP assay for ATP11B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ATP11B is not available on ENCORE database.

87 RBPs can affect the gene expression of ATP11B :

The Knockdown/knockout RNA-Seq assay for ATP11B is not available on ENCORE database.

4 RBPs can affect the splicing of ATP11B :

The Knockdown/knockout RNA-Seq assay for ATP11B is not avaliable on ENCORE database.