RRP9

General Information

Gene Name       : RRP9
Gene ID             : ENSG00000114767.6
Essential Gene : Yes

Functions

Localization(RBPImage: RRP9)

Domains (AlphaFold: RRP9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RRP9ENSG00000114767.64.1720.8312.50ENCSR000AEF
HepG2RRP9ENSG00000114767.639.3017.8228.56ENCSR985KAT
K562RRP9ENSG00000114767.640.1230.9035.51ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq RRP9-BGKLV19-K562ENCSR210KJBRRP9K562ReleasedENCSR661HEL   shRNAKD% = 97.8,97.9
knockdown followed by RNA-seq RRP9-BGHLV17-HepG2ENCSR471GISRRP9HepG2ReleasedENCSR856ZRV   shRNAKD% = 99.9,99.9






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
RRP9ENCAB337GZIA303-970A1Released, ENCODE3BGHLV17-25, Released, ENCODE3BGKLV19-47, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RRP9K562shRNAENCSR210KJBENCSR661HELRRP9_BGKLV19_47B,RRP9_BGKLV19_48BNT_BGKLV19_1B,NT_BGKLV19_2B97.8,97.9ReleasedENCODE3
RRP9HepG2shRNABGHLV16-47,BGHLV16-48BGHLV16-1,BGHLV16-2NotSatisfiedENCODE3
RRP9HepG2shRNAENCSR471GISENCSR856ZRVRRP9_BGHLV17_25,RRP9_BGHLV17_26NT_BGHLV17_63,NT_BGHLV17_6499.9,99.9ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    RRP9: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Nucleolus
  • Cytoplasm
  • Compartment/Organelle
  • Golgi












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    RRP9Product_ID: A303-970A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: RRP9-human    		 RRP9_Secondary_Western.png<br>Caption: Western blot following shRNA against RRP9 in K562 and HepG2 whole cell lysate using RRP9 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against RRP9. Lanes 5-8 follow the same pattern, but in HepG2. RRP9 protein appears as the green band, GAPDH serves as a control and appears in red.
    		 K562_Bethyl_A303-970A_1_RRP9.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using RRP9 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-RRP9 antibody (lanes under 'RRP9').
    		 RRP9_Secondary_Western.png<br>Caption: Western blot following shRNA against RRP9 in K562 and HepG2 whole cell lysate using RRP9 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against RRP9. Lanes 5-8 follow the same pattern, but in HepG2. RRP9 protein appears as the green band, GAPDH serves as a control and appears in red.








    RNA Targets

    • eCLIP assay for RRP9 is not avaliable on ENCORE database.



    Proteins bound to RNA
    • RRP9 RNA is bound by 6 proteins.  







    eCLIP assay for RRP9 is not avaliable on ENCORE database.





    6 proteins are bound to RRP9 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr35197579651975887-5'-UTR,CDS,intron-Distal4.270928.45138K562DDX3X
    chr35197168451971734-CDS,intron-Distal,intron-Proximal4.591038.68543HepG2PPIG
    chr35197022651970292-CDS,intron-Distal,intron-Proximal4.449957.46483HepG2PRPF8
    chr35197207151972113-CDS,intron-Distal,intron-Proximal4.892515.01842HepG2PRPF8
    chr35197116351971217-CDS,intron-Distal,intron-Proximal3.780034.54206HepG2PRPF8
    chr35196770151967753-CDS,intron-Distal,intron-Proximal4.910296.92731HepG2PRPF8
    chr35196917651969228-CDS,intron-Distal,intron-Proximal4.066475.34978HepG2PRPF8
    chr35196928251969316-intron-Distal,intron-Proximal4.273994.02817HepG2PRPF8
    chr35196822851968290-intron-Distal3.958603.45219HepG2RBFOX2
    chr35197147551971528-intron-Distal5.082314.47382K562EFTUD2
    chr35197020551970264-intron-Distal,intron-Proximal4.422483.49003K562PRPF8
    chr35196761651967709-intron-Distal,intron-Proximal3.742674.34573HepG2SF3B4
    chr35197006051970113-intron-Distal4.267203.85435K562PRPF8
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for RRP9 is not avaliable on ENCORE database.



    Diffrential Expression
    • 6,060 differentially expressed genes after Knockdown/Knockout RRP9 protein.  





    • 96 RBPs can affect the levels of RRP9.  







    6,060 differentially expressed genes after Knockdown/Knockout RRP9 protein :

    Only display 100 entries as example. Please click "View All" button to see all 6,060 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    C1orf112ENSG00000000460.1271.85560291.72230-2.0214017.4391015.77940HepG2RRP9
    FUCA2ENSG00000001036.92985.171302369.279600.333302.362301.62950HepG2RRP9
    GCLCENSG00000001084.61581.15510875.570000.8526010.214108.84220HepG2RRP9
    NIPAL3ENSG00000001461.12308.32160169.154800.866005.305004.24900HepG2RRP9
    LAS1LENSG00000001497.12331.71070585.28010-0.819206.021804.91020HepG2RRP9
    SEMA3FENSG00000001617.7625.54460279.710301.161106.811005.63750HepG2RRP9
    ANKIB1ENSG00000001629.51254.88920728.867700.783708.786807.49030HepG2RRP9
    MAD1L1ENSG00000002822.11153.04080237.90250-0.636502.563201.80310HepG2RRP9
    LASP1ENSG00000002834.136906.374904339.035100.670507.863706.62000HepG2RRP9
    ALS2ENSG00000003393.10974.20580736.140600.404102.376001.64120HepG2RRP9
    CFLARENSG00000003402.151513.444101201.728600.332602.025101.34240HepG2RRP9
    TFPIENSG00000003436.109498.688104162.194301.1903025.7161023.80660HepG2RRP9
    SLC7A2ENSG00000003989.121621.661402670.39730-0.719607.923406.67670HepG2RRP9
    ARF5ENSG00000004059.6353.54530499.86050-0.499602.021201.33950HepG2RRP9
    POLDIP2ENSG00000004142.7997.145801393.34280-0.482703.686502.79600HepG2RRP9
    AK2ENSG00000004455.121237.105402078.07990-0.748308.579807.29800HepG2RRP9
    FKBP4ENSG00000004478.51026.328001300.97250-0.342102.050701.36380HepG2RRP9
    CCDC132ENSG00000004766.11364.52880247.830900.556602.411401.67270HepG2RRP9
    DVL2ENSG00000004975.7389.79720530.89360-0.445702.417101.67770HepG2RRP9
    SKAP2ENSG00000005020.8861.39830502.829300.776506.777805.60910HepG2RRP9
    SLC25A5ENSG00000005022.52431.541803369.23470-0.470504.428703.45960HepG2RRP9
    THSD7AENSG00000005108.1126.273908.262001.669002.246501.53070HepG2RRP9
    LIG3ENSG00000005156.7318.91470580.50060-0.864107.344706.13600HepG2RRP9
    ACSM3ENSG00000005187.7216.86520400.97920-0.886706.039504.92540HepG2RRP9
    AC004381.6ENSG00000005189.1542.21270182.92830-2.1155012.9214011.42870HepG2RRP9
    CIAPIN1ENSG00000005194.10529.56040937.31920-0.823708.040406.78770HepG2RRP9
    FAM214BENSG00000005238.15179.4788087.480101.036703.826602.91990HepG2RRP9
    WDR54ENSG00000005448.1224.07090136.96750-2.5085013.1682011.66660HepG2RRP9
    CROTENSG00000005469.7440.14290189.787701.2135010.096708.73370HepG2RRP9
    ZNF195ENSG00000005801.12717.65110333.127201.1071011.149009.73610HepG2RRP9
    FBXL3ENSG00000005812.6452.94080332.719000.444902.290001.56810HepG2RRP9
    PDK2ENSG00000005882.7120.35350275.03470-1.192306.382105.24330HepG2RRP9
    LAMP2ENSG00000005893.113093.728802490.409400.312902.169601.46440HepG2RRP9
    ASB4ENSG00000005981.8551.68350102.566302.4272035.2385033.08130HepG2RRP9
    GDE1ENSG00000006007.71513.837201140.218700.408802.733301.95060HepG2RRP9
    TMEM98ENSG00000006042.7882.751201108.09110-0.328001.978901.30310HepG2RRP9
    SYNRGENSG00000006114.11417.91790574.75510-0.459702.375301.64070HepG2RRP9
    AP2B1ENSG00000006125.121990.948002621.58730-0.397002.930502.12430HepG2RRP9
    SPATA20ENSG00000006282.15723.80390994.54750-0.458402.335101.60650HepG2RRP9
    TNFRSF12AENSG00000006327.91240.82260390.419001.6681029.1293027.10840HepG2RRP9
    BAIAP2L1ENSG00000006453.91025.74550467.050301.1349014.1549012.61640HepG2RRP9
    JHDM1DENSG00000006459.61524.52580954.548800.675407.049705.86040HepG2RRP9
    ALDH3B1ENSG00000006534.1124.32970104.08850-2.097008.138806.87820HepG2RRP9
    GGCTENSG00000006625.13194.05680495.77100-1.3532013.4360011.92540HepG2RRP9
    DBF4ENSG00000006634.3202.54510379.63000-0.906405.771504.67640HepG2RRP9
    IFRD1ENSG00000006652.9881.57810497.233300.826107.751106.51850HepG2RRP9
    VPS41ENSG00000006715.11818.53640549.963900.573604.213203.26460HepG2RRP9
    ARSDENSG00000006756.11325.97550143.423901.184408.065606.81150HepG2RRP9
    ADIPOR2ENSG00000006831.91281.234201966.92780-0.618405.972804.86430HepG2RRP9
    UPP2ENSG00000007001.814.416600.373105.272102.954302.14480HepG2RRP9
    PROM1ENSG00000007062.7884.98490468.915600.916209.193107.87870HepG2RRP9
    TRAPPC6AENSG00000007255.623.4550051.98970-1.148302.295801.57280HepG2RRP9
    PAX6ENSG00000007372.16341.1685027.800303.6172041.7636039.45920HepG2RRP9
    RHBDF1ENSG00000007384.11223.27680119.871600.897203.706602.81410HepG2RRP9
    CRAMP1LENSG00000007545.11596.78090444.418300.425202.044801.35860HepG2RRP9
    E2F2ENSG00000007968.634.14630205.42650-2.5888019.9445018.19700HepG2RRP9
    CDK11AENSG00000008128.18518.86370371.945300.480202.398901.66140HepG2RRP9
    CYTH3ENSG00000008256.11261.15010148.502500.814303.807002.90310HepG2RRP9
    PLEKHG6ENSG00000008323.1171.33710147.73170-1.050304.312403.35390HepG2RRP9
    SS18L2ENSG00000008324.685.81940174.17890-1.021204.195703.25040HepG2RRP9
    MPNDENSG00000008382.1162.16970118.00630-0.924603.045502.22690HepG2RRP9
    MGST1ENSG00000008394.8799.748001547.61920-0.9524012.1027010.64440HepG2RRP9
    NFIXENSG00000008441.12398.54530273.542400.542902.136001.43760HepG2RRP9
    ST3GAL1ENSG00000008513.10515.10780703.52560-0.449702.759301.97300HepG2RRP9
    IL32ENSG00000008517.121800.682201352.793300.412502.735101.95210HepG2RRP9
    HEATR5BENSG00000008869.7858.87150525.869500.707605.665904.57780HepG2RRP9
    RPS20ENSG00000008988.53287.264504070.15780-0.308202.146601.44660HepG2RRP9
    UBE3CENSG00000009335.131287.67650961.966000.420602.695101.91680HepG2RRP9
    REV3LENSG00000009413.111569.108301054.792300.572905.384804.32210HepG2RRP9
    MLXIPLENSG00000009950.11869.198701537.94740-0.823202.741901.95810HepG2RRP9
    BAZ1BENSG00000009954.61682.207102339.68270-0.476003.599402.71790HepG2RRP9
    SPRTNENSG00000010072.11215.30790137.828000.643402.523701.76910HepG2RRP9
    UQCRC1ENSG00000010256.61406.667502069.55030-0.557005.469704.40000HepG2RRP9
    STARD3NLENSG00000010270.9540.83250412.449200.390902.049801.36300HepG2RRP9
    CD9ENSG00000010278.7274.78940129.337201.087106.213505.08440HepG2RRP9
    NCAPD2ENSG00000010292.8885.278002783.31760-1.6526039.4094037.16860HepG2RRP9
    SEMA3GENSG00000010319.2159.16560308.04740-0.952605.476204.40520HepG2RRP9
    IDSENSG00000010404.131373.69070445.298201.6251029.8089027.77190HepG2RRP9
    HFEENSG00000010704.1464.08050116.48410-0.862202.539601.78300HepG2RRP9
    SCMH1ENSG00000010803.12451.25450632.62930-0.487402.944702.13650HepG2RRP9
    HIVEP2ENSG00000010818.41011.59130430.808501.2314016.8847015.23940HepG2RRP9
    NME2ENSG00000011052.17385.83950139.742601.465102.827702.03330HepG2RRP9
    ABHD5ENSG00000011198.3101.8880049.174101.050903.218802.38000HepG2RRP9
    AKAP8LENSG00000011243.13920.03490641.289000.520603.594402.71360HepG2RRP9
    RNF216ENSG00000011275.141112.27380644.567400.787007.248506.04730HepG2RRP9
    PTBP1ENSG00000011304.121739.313403135.81060-0.850309.201007.88540HepG2RRP9
    LARS2ENSG00000011376.5434.76570703.03820-0.693405.572504.49240HepG2RRP9
    PIK3C2AENSG00000011405.92377.991201802.934400.399303.509002.63790HepG2RRP9
    ANLNENSG00000011426.6281.140501845.64320-2.7148077.9449074.88460HepG2RRP9
    QPCTLENSG00000011478.778.72520295.66760-1.909105.346604.28650HepG2RRP9
    MAP4K3ENSG00000011566.102511.010101367.480200.8766012.5978011.12130HepG2RRP9
    BRCA1ENSG00000012048.15134.31740752.77900-2.4866045.2613042.88680HepG2RRP9
    CD22ENSG00000012124.1055.0421013.743502.001703.865502.95410HepG2RRP9
    EXTL3ENSG00000012232.4850.22090577.889100.556903.595602.71460HepG2RRP9
    NR1H4ENSG00000012504.9312.01430576.33710-0.885307.400306.18820HepG2RRP9
    ELOVL5ENSG00000012660.92481.233801839.982200.431303.826002.91950HepG2RRP9
    CALCOCO1ENSG00000012822.11597.13800452.988300.398502.204801.49560HepG2RRP9
    UBR7ENSG00000012963.9308.45050528.24170-0.776205.093804.06120HepG2RRP9
    MAP4K5ENSG00000012983.71039.48210723.783900.522104.337703.37710HepG2RRP9
    MVPENSG00000013364.141164.16790554.456401.070104.688803.69670HepG2RRP9
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    96 RBPs can affect the gene expression of RRP9 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    RRP9ENSG00000114767.6510.79230331.873400.622003.473702.88650HepG2AKAP1
    RRP9ENSG00000114767.6177.24080281.43180-0.667103.658102.24920HepG2BUD13
    RRP9ENSG00000114767.6442.60620297.159100.574703.335402.61710HepG2CKAP4
    RRP9ENSG00000114767.6215.91540377.59010-0.806405.613104.66600HepG2CPSF6
    RRP9ENSG00000114767.6284.46220187.215900.603403.690502.51400HepG2YBX3
    RRP9ENSG00000114767.6465.07940297.018400.646806.473405.56870HepG2CELF1
    RRP9ENSG00000114767.6369.91260274.873600.428303.047002.17510HepG2DDX19B
    RRP9ENSG00000114767.6171.87110428.78400-1.318908.454806.80880HepG2DDX59
    RRP9ENSG00000114767.6164.39950262.48120-0.675002.472701.91040HepG2EIF2S1
    RRP9ENSG00000114767.6248.48460160.787800.627902.546401.67500HepG2EIF3D
    RRP9ENSG00000114767.6419.60300282.482500.570802.531601.87230HepG2EIF4B
    RRP9ENSG00000114767.6598.06600290.437701.0420013.4085011.64160HepG2EWSR1
    RRP9ENSG00000114767.6405.88260292.792200.471101.901701.32310HepG2FXR1
    RRP9ENSG00000114767.6200.28930428.00560-1.095508.918207.81250HepG2GPKOW
    RRP9ENSG00000114767.6296.49080458.88270-0.630106.172005.15860HepG2HNRNPF
    RRP9ENSG00000114767.6462.93550275.153800.750505.469904.51260HepG2HNRNPK
    RRP9ENSG00000114767.6189.71580408.45570-1.106309.423308.33870HepG2HNRNPLL
    RRP9ENSG00000114767.6282.20670205.082200.460402.618002.02900HepG2HNRNPU
    RRP9ENSG00000114767.6337.51440451.86540-0.420901.928101.31540HepG2IGF2BP1
    RRP9ENSG00000114767.6436.35290275.952100.661004.205703.38860HepG2IGF2BP2
    RRP9ENSG00000114767.6425.15250292.895200.537502.911202.23830HepG2MAGOH
    RRP9ENSG00000114767.6945.24740294.504901.6823026.1254024.36450HepG2MATR3
    RRP9ENSG00000114767.6185.96350416.62010-1.163707.409005.79040HepG2MTPAP
    RRP9ENSG00000114767.6194.89580362.19020-0.894006.024604.94550HepG2NSUN2
    RRP9ENSG00000114767.6276.56290203.004500.446002.307801.52800HepG2PARN
    RRP9ENSG00000114767.6493.29670296.544600.734108.046707.10030HepG2PCBP1
    RRP9ENSG00000114767.6719.80920320.883701.1655027.2393025.76690HepG2PUM1
    RRP9ENSG00000114767.6520.22980320.634600.698105.697804.74720HepG2PUM2
    RRP9ENSG00000114767.6242.42780326.78690-0.430802.124101.56470HepG2QKI
    RRP9ENSG00000114767.6706.88220523.684500.432703.900903.31350HepG2RBM22
    RRP9ENSG00000114767.6416.37840249.897500.736504.591303.29230HepG2RBM27
    RRP9ENSG00000114767.6340.58620494.37480-0.537603.671902.90300HepG2RPLP0
    RRP9ENSG00000114767.6304.94460156.460000.962707.049806.11980HepG2RPS19
    RRP9ENSG00000114767.6336.95010230.461100.547902.546801.77720HepG2RPS2
    RRP9ENSG00000114767.6404.98130235.262200.783505.157803.67510HepG2RPS5
    RRP9ENSG00000114767.669.42620228.95950-1.721505.101704.06770HepG2RRP9
    RRP9ENSG00000114767.6592.22920319.452100.890502.906802.21500HepG2SF3A3
    RRP9ENSG00000114767.6365.08990212.994000.777307.556306.57290HepG2SMN1
    RRP9ENSG00000114767.6464.22650591.48250-0.349502.625702.13250HepG2SRFBP1
    RRP9ENSG00000114767.6451.39570327.910100.461003.273302.76980HepG2SRSF1
    RRP9ENSG00000114767.6292.89020435.04050-0.570802.812201.80200HepG2SRSF3
    RRP9ENSG00000114767.6533.09860298.463900.8367011.110809.97080HepG2SRSF5
    RRP9ENSG00000114767.6319.01820450.84770-0.499004.114203.29150HepG2SRSF7
    RRP9ENSG00000114767.6305.42030513.54720-0.749708.651407.84390HepG2SSB
    RRP9ENSG00000114767.6622.65990339.411500.8753014.0263012.80550HepG2SUCLG1
    RRP9ENSG00000114767.6165.47520298.96260-0.853402.164101.55620HepG2SUPV3L1
    RRP9ENSG00000114767.6178.91610294.75900-0.720304.787604.08280HepG2TAF15
    RRP9ENSG00000114767.6262.43440398.17660-0.601503.658802.84000HepG2TARDBP
    RRP9ENSG00000114767.6316.40690201.055500.654105.006804.29300HepG2TRIM56
    RRP9ENSG00000114767.6462.33950295.331800.646505.341504.08320HepG2TUFM
    RRP9ENSG00000114767.6338.54880176.557900.939105.476904.40300HepG2UCHL5
    RRP9ENSG00000114767.6771.84760273.520401.4966035.6216033.83780HepG2UTP3
    RRP9ENSG00000114767.6319.73320188.755000.760303.963002.69590HepG2XRCC6
    RRP9ENSG00000114767.6180.94590242.05290-0.419801.963601.38230HepG2ZC3H8
    RRP9ENSG00000114767.6413.96230287.575700.525503.700703.06220K562AGGF1
    RRP9ENSG00000114767.6444.75310299.230900.571603.783303.01740K562AKAP8L
    RRP9ENSG00000114767.6487.72820949.71080-0.961405.120604.36510K562AQR
    RRP9ENSG00000114767.6340.98450479.44560-0.491702.203001.43070K562BOP1
    RRP9ENSG00000114767.6988.75450773.091000.354903.485402.23810K562CPEB4
    RRP9ENSG00000114767.6303.50870509.81160-0.748205.455304.36120K562CPSF6
    RRP9ENSG00000114767.6827.87990521.137900.667705.295703.45580K562DDX27
    RRP9ENSG00000114767.61819.80760800.046901.1855042.1491039.89880K562DDX47
    RRP9ENSG00000114767.6539.28470322.023600.743808.146806.50580K562DKC1
    RRP9ENSG00000114767.6682.018201022.41480-0.584108.420207.26780K562EIF2S2
    RRP9ENSG00000114767.6807.26840372.153001.117108.641906.83070K562EIF3A
    RRP9ENSG00000114767.6614.17050182.583701.7500011.437409.79760K562EIF3G
    RRP9ENSG00000114767.6123.00830195.33380-0.667203.117301.41330K562FASTKD2
    RRP9ENSG00000114767.6284.00110518.67600-0.868908.031606.52750K562FMR1
    RRP9ENSG00000114767.6274.19850439.60510-0.681004.545303.34630K562FTO
    RRP9ENSG00000114767.692.67670161.41440-0.800503.613402.05170K562FUS
    RRP9ENSG00000114767.6939.70680323.939301.5364039.6357037.50060K562FXR1
    RRP9ENSG00000114767.621.66500107.30930-2.3083010.619309.05870K562G3BP2
    RRP9ENSG00000114767.6294.29990486.76320-0.725904.025003.07190K562GPKOW
    RRP9ENSG00000114767.61647.116301362.384100.273701.997801.34970K562GRSF1
    RRP9ENSG00000114767.6240.32780466.23500-0.956102.834601.59710K562HNRNPA2B1
    RRP9ENSG00000114767.6304.27280514.28330-0.757206.717305.82730K562HNRNPC
    RRP9ENSG00000114767.6831.79190569.078000.547504.024702.88710K562HNRNPM
    RRP9ENSG00000114767.6275.43670415.58620-0.593402.887401.92940K562KRR1
    RRP9ENSG00000114767.6445.55440227.821800.9676010.285708.60240K562MAGOH
    RRP9ENSG00000114767.6440.13550227.328500.953106.758605.23270K562MATR3
    RRP9ENSG00000114767.6925.762201190.23570-0.362502.444801.38590K562MSI2
    RRP9ENSG00000114767.6311.01280202.667600.617803.505702.40710K562PCBP2
    RRP9ENSG00000114767.6371.38100701.00430-0.916509.210907.69650K562PCBP3
    RRP9ENSG00000114767.6377.05670537.70020-0.512003.825802.87730K562POLR2G
    RRP9ENSG00000114767.6725.73080523.119800.472202.909902.14210K562PRPF8
    RRP9ENSG00000114767.6577.34120221.358401.3829022.6578020.82890K562PTBP1
    RRP9ENSG00000114767.6405.77230296.788900.451102.199301.70360K562PUS1
    RRP9ENSG00000114767.6335.63920212.144600.661804.345603.26250K562RBM22
    RRP9ENSG00000114767.61165.21940532.751001.1290014.4201012.53230K562RPS19
    RRP9ENSG00000114767.669.07080534.75370-2.9527035.2324031.17160K562RRP9
    RRP9ENSG00000114767.6714.96310479.085200.577505.236303.74310K562SAFB
    RRP9ENSG00000114767.6310.03290462.86120-0.578203.243702.18850K562SF3B1
    RRP9ENSG00000114767.6207.16480111.499300.893605.397604.17510K562SF3B4
    RRP9ENSG00000114767.690.28190167.66060-0.893004.212802.14410K562SND1
    RRP9ENSG00000114767.6387.68380217.027900.836906.873405.76770K562SRSF1
    RRP9ENSG00000114767.6518.68410680.43960-0.391603.129501.87760K562SRSF7
    RRP9ENSG00000114767.6617.41890907.73140-0.556004.783202.95440K562SSRP1
    RRP9ENSG00000114767.6227.94440512.78050-1.169703.394501.75730K562SUPT6H
    RRP9ENSG00000114767.6375.96580506.30470-0.429402.328301.40050K562SUPV3L1
    RRP9ENSG00000114767.6865.20360539.319100.681808.208406.78710K562SYNCRIP
    RRP9ENSG00000114767.640.80490105.32970-1.368104.004402.11360K562TAF15
    RRP9ENSG00000114767.6335.64450219.597000.612003.604202.79340K562TARDBP
    RRP9ENSG00000114767.6314.03120211.839100.567803.323602.41580K562TIA1
    RRP9ENSG00000114767.6919.908201193.45230-0.375604.747703.08020K562TROVE2
    RRP9ENSG00000114767.667.87620107.36120-0.661502.037601.34950K562U2AF2
    RRP9ENSG00000114767.6354.73850535.95540-0.595404.330603.03020K562UCHL5
    RRP9ENSG00000114767.6542.74960768.07720-0.501003.441802.64590K562UPF1
    RRP9ENSG00000114767.6445.17900657.22950-0.562003.127102.19910K562WDR3
    RRP9ENSG00000114767.6889.23920683.373000.379804.038503.02980K562WDR43
    RRP9ENSG00000114767.6174.68960437.07870-1.323103.583901.58760K562XPO5
    RRP9ENSG00000114767.6736.542101070.07630-0.538902.506501.69290K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for RRP9 is not available on ENCORE database.





    4 RBPs can affect the splicing of RRP9 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    A3SSRRP9ENSG00000114767.6chr3-519754245197552351975424519755075197579651975957-0.175000.000150.01603shorterHepG2SF3A3
    A3SSRRP9ENSG00000114767.6chr3-5197044651970598519704465197057151971207519713340.265000.000000.00145longerK562RBM22
    A3SSRRP9ENSG00000114767.6chr3-5197044651970598519704465197057151971207519713340.273000.000000.00000longerHepG2RBM22
    A3SSRRP9ENSG00000114767.6chr3-5197211051972324519721105197222051975424519755070.104000.000000.00000longerK562AQR
    A3SSRRP9ENSG00000114767.6chr3-5196960751969812519696075196970851970272519703650.077000.000000.00002longerK562AQR
    A3SSRRP9ENSG00000114767.6chr3-5196864651968846519686465196879251969212519692750.071000.000050.00044longerK562AQR
    A3SSRRP9ENSG00000114767.6chr3-5197045351970598519704535197057151971207519713570.092000.000300.00233longerK562AQR
    A3SSRRP9ENSG00000114767.6chr3-5197120751971398519712075197133451971560519717860.111000.000010.00012longerK562AQR
    A3SSRRP9ENSG00000114767.6chr3-519754245197552351975424519755075197579651975957-0.132000.000110.08062shorterK562APOBEC3C

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for RRP9 is not avaliable on ENCORE database.