CD9

General Information

Gene Name       : CD9
Gene ID             : ENSG00000010278.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CD9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CD9ENSG00000010278.1312.825.859.34ENCSR000AEF
HepG2CD9ENSG00000010278.1311.7810.8011.29ENCSR985KAT
K562CD9ENSG00000010278.130.300.440.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CD9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CD9 RNA is bound by 3 proteins.  







eCLIP assay for CD9 is not avaliable on ENCORE database.





3 proteins are bound to CD9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1263417976341897+3'-UTR,CDS,intron-Proximal4.2357011.81785HepG2SND1
chr1263471846347297+3'-UTR3.384744.10134HepG2LARP4
chr1263469586347008+3'-UTR,CDS4.244663.77218HepG2SND1
chr1263471976347278+3'-UTR3.647604.34279HepG2FUBP3
chr1263453896345438+CDS4.556484.55355HepG2SND1
chr1263425916342649+CDS3.707664.66892HepG2SND1
chr1263446466344732+CDS,intron-Proximal5.203435.85174HepG2SND1
chr1263444166344491+CDS3.783664.66892HepG2SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CD9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CD9 is not available on ENCORE database.

  • 94 RBPs can affect the levels of CD9.  








The Knockdown/knockout RNA-Seq assay for CD9 is not available on ENCORE database.





94 RBPs can affect the gene expression of CD9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CD9ENSG00000010278.7348.68430205.525100.762505.273603.83050HepG2AATF
CD9ENSG00000010278.7132.68450261.30290-0.977704.804303.59450HepG2ABCF1
CD9ENSG00000010278.7648.06850189.399601.7746043.4505041.75750HepG2ACO1
CD9ENSG00000010278.7335.89850586.67610-0.804505.795905.05810HepG2AKAP1
CD9ENSG00000010278.7434.59590263.709700.720604.893203.52090HepG2AKAP8
CD9ENSG00000010278.7274.99690190.324300.530903.084402.28010HepG2AKAP8L
CD9ENSG00000010278.7541.88970282.316300.9406012.4791011.20710HepG2AUH
CD9ENSG00000010278.744.04010355.71830-3.013805.680404.86060HepG2BOP1
CD9ENSG00000010278.7158.92430470.26780-1.5651015.5399013.38690HepG2CCAR1
CD9ENSG00000010278.7235.56380461.19010-0.969208.212606.93870HepG2CIRBP
CD9ENSG00000010278.759.50200189.40040-1.6704014.1146012.85420HepG2CKAP4
CD9ENSG00000010278.7378.01780635.16180-0.748704.374203.40870HepG2CNOT7
CD9ENSG00000010278.743.73060106.48620-1.284004.981003.59410HepG2CSTF2
CD9ENSG00000010278.71009.97030383.286101.3977036.9085035.10290HepG2CELF1
CD9ENSG00000010278.7113.09290175.18680-0.631403.244402.34760HepG2DDX19B
CD9ENSG00000010278.791.14150226.45530-1.313009.227608.06420HepG2DDX21
CD9ENSG00000010278.7128.38490221.85360-0.789104.109002.98540HepG2DDX24
CD9ENSG00000010278.776.22980128.40470-0.752302.913201.48360HepG2DDX28
CD9ENSG00000010278.7314.44470562.00070-0.837806.958306.00800HepG2DDX3X
CD9ENSG00000010278.7273.25390169.517900.688702.830202.04870HepG2DDX55
CD9ENSG00000010278.7892.37830482.748200.886308.584007.55490HepG2DDX6
CD9ENSG00000010278.7162.27410250.84850-0.628402.685301.77490HepG2EEF2
CD9ENSG00000010278.7229.27890464.09940-1.017308.798807.78020HepG2EIF2S1
CD9ENSG00000010278.7189.64240512.89490-1.4354015.9186014.39940HepG2EIF4A3
CD9ENSG00000010278.7138.90200499.35510-1.8460018.8839017.20120HepG2EIF4B
CD9ENSG00000010278.7317.68380554.54630-0.803704.254501.77710HepG2FASTKD1
CD9ENSG00000010278.7483.61660263.864300.874005.762604.69140HepG2FIP1L1
CD9ENSG00000010278.7108.61610281.21750-1.3724011.6424010.07940HepG2FUBP3
CD9ENSG00000010278.7244.55290517.45760-1.0813010.372809.11910HepG2FXR1
CD9ENSG00000010278.7246.27570509.59630-1.0491010.099508.39810HepG2G3BP2
CD9ENSG00000010278.764.14510181.29910-1.499009.372507.77120HepG2GEMIN5
CD9ENSG00000010278.7380.81590587.98830-0.626703.510202.25380HepG2GRSF1
CD9ENSG00000010278.7397.22610248.735500.675202.945801.51800HepG2HLTF
CD9ENSG00000010278.772.58680204.33330-1.493109.562408.46830HepG2HNRNPA1
CD9ENSG00000010278.798.75650227.28910-1.202607.309706.22370HepG2HNRNPC
CD9ENSG00000010278.7192.33610486.03930-1.3374014.7073013.22140HepG2HNRNPK
CD9ENSG00000010278.7141.03780353.38990-1.325201.998401.45500HepG2HNRNPLL
CD9ENSG00000010278.7358.48520487.95060-0.444802.348001.72030HepG2IGF2BP2
CD9ENSG00000010278.7183.94160457.89660-1.315805.587404.21380HepG2IGF2BP3
CD9ENSG00000010278.7305.26560230.631800.404402.435101.74270HepG2ILF2
CD9ENSG00000010278.7397.26870605.29070-0.607503.865402.41720HepG2KHDRBS1
CD9ENSG00000010278.7291.72780490.78380-0.750504.478203.17500HepG2KHSRP
CD9ENSG00000010278.7414.27180286.924400.529802.556901.36520HepG2KRR1
CD9ENSG00000010278.7676.59790496.599900.446102.316801.56120HepG2LARP4
CD9ENSG00000010278.7190.47530517.63810-1.4423016.7989015.25290HepG2MAGOH
CD9ENSG00000010278.7231.52420520.54040-1.1688010.712009.53140HepG2MATR3
CD9ENSG00000010278.7299.40400532.80630-0.831506.624905.66390HepG2NCBP2
CD9ENSG00000010278.7940.27470580.560300.695503.920202.85010HepG2PABPC1
CD9ENSG00000010278.7171.39830412.27310-1.266209.909008.87410HepG2PCBP1
CD9ENSG00000010278.794.48920142.30860-0.590802.186601.49150HepG2PRPF4
CD9ENSG00000010278.7131.79230258.16790-0.970004.944903.35280HepG2PRPF6
CD9ENSG00000010278.7214.33820130.750300.713002.851802.03040HepG2PRPF8
CD9ENSG00000010278.7323.88130419.46470-0.373101.936101.46320HepG2PTBP1
CD9ENSG00000010278.7613.52630413.839600.568004.859003.98360HepG2PUM2
CD9ENSG00000010278.7104.62880192.92190-0.882705.424304.61410HepG2PUS1
CD9ENSG00000010278.7160.63450454.37290-1.5001014.3310013.06570HepG2QKI
CD9ENSG00000010278.7825.34410236.979001.8001018.3350016.67760HepG2RAVER1
CD9ENSG00000010278.7533.29080282.066600.918805.727704.55040HepG2RBM15
CD9ENSG00000010278.7205.83280412.34150-1.002408.530607.39600HepG2RBM25
CD9ENSG00000010278.7189.30210294.06900-0.635503.434302.32450HepG2RBM27
CD9ENSG00000010278.7132.72140238.79760-0.847403.758302.52120HepG2RCC2
CD9ENSG00000010278.7185.40570466.85600-1.332307.679406.85830HepG2NELFE
CD9ENSG00000010278.7257.64250434.75470-0.754806.212905.34010HepG2RECQL
CD9ENSG00000010278.7801.14640421.436200.9267012.7327011.45830HepG2RPLP0
CD9ENSG00000010278.7402.52480637.86700-0.664204.248603.25660HepG2RPS3A
CD9ENSG00000010278.7274.78940129.337201.087106.213505.08440HepG2RRP9
CD9ENSG00000010278.7139.77110201.06880-0.524602.394601.78870HepG2SAFB2
CD9ENSG00000010278.7248.29410600.66090-1.2745013.5295010.86330HepG2SART3
CD9ENSG00000010278.7271.21660605.90980-1.159709.194306.63180HepG2SBDS
CD9ENSG00000010278.746.12890191.44510-2.0532013.5032011.94740HepG2SF3A3
CD9ENSG00000010278.7325.33140436.78610-0.425002.547101.97580HepG2SF3B4
CD9ENSG00000010278.7253.25680374.04640-0.562604.516903.65490HepG2SLBP
CD9ENSG00000010278.7398.72540234.474100.765907.742406.75110HepG2SMN1
CD9ENSG00000010278.7854.77170305.995401.4819037.7048036.40950HepG2SRFBP1
CD9ENSG00000010278.7160.11090455.88190-1.5096013.9237013.03720HepG2SRSF1
CD9ENSG00000010278.7734.02500385.183900.9302015.4057014.09620HepG2SRSF5
CD9ENSG00000010278.7578.27910370.859900.640805.379404.65430HepG2SRSF9
CD9ENSG00000010278.7171.64180265.67070-0.630203.937503.34940HepG2SSB
CD9ENSG00000010278.7383.13260221.467800.790603.984802.52690HepG2SUB1
CD9ENSG00000010278.7279.31330438.07760-0.649306.592605.70470HepG2SUCLG1
CD9ENSG00000010278.7424.09350168.747001.3294010.550409.37090HepG2SUPV3L1
CD9ENSG00000010278.7203.75220409.68600-1.007708.722407.81680HepG2TAF15
CD9ENSG00000010278.7486.31780280.999600.791203.244402.09030HepG2TBRG4
CD9ENSG00000010278.7187.88700113.101800.732102.749101.75680HepG2TFIP11
CD9ENSG00000010278.7224.78470376.52880-0.744205.132104.00530HepG2TIA1
CD9ENSG00000010278.7224.12410381.12040-0.765905.896404.55690HepG2TUFM
CD9ENSG00000010278.7323.19160225.746500.517602.342501.76010HepG2U2AF1
CD9ENSG00000010278.7177.7620099.680200.834503.781202.89440HepG2UCHL5
CD9ENSG00000010278.789.57350154.50590-0.786502.543201.58390HepG2UPF2
CD9ENSG00000010278.732.52490163.91860-2.3334016.6580015.37210HepG2UTP3
CD9ENSG00000010278.7375.12860571.34280-0.607003.473602.23590HepG2XPO5
CD9ENSG00000010278.7212.70340140.447700.598702.685102.02320HepG2ZC3H8
CD9ENSG00000010278.7333.08760186.728400.834907.960607.15710HepG2ZNF622
CD9ENSG00000010278.736.1341015.126901.256102.098901.52720K562AKAP8L
CD9ENSG00000010278.757.2247025.763501.151202.418501.67420K562GPKOW
CD9ENSG00000010278.759.4048020.123001.561603.175602.14790K562PUM2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CD9 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CD9 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CD9 is not avaliable on ENCORE database.