FXR1

General Information

Gene Name       : FXR1
Gene ID             : ENSG00000114416.17
Essential Gene : No

Functions

Localization(RBPImage: FXR1)

Domains (AlphaFold: FXR1)


Antibody Validation

 View validation images for all FXR1 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FXR1ENSG00000114416.17103.8189.0296.41ENCSR000AEF
HepG2FXR1ENSG00000114416.1799.87116.49108.18ENCSR985KAT
K562FXR1ENSG00000114416.1795.55100.6798.11ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 315ENCSR774RFNFXR1K562ReleasedENCAB162GMEENCSR562BJW  
eCLIPeCLIP: 4036ENCSR248TXPFXR1K562ReleasedENCAB076XDIENCSR111UKN  
knockdown followed by RNA-seq FXR1-BGKLV08-K562ENCSR780YFFFXR1K562ReleasedENCSR913CAE   shRNAKD% = 96.1,74.5
knockdown followed by RNA-seq FXR1-BGHLV12-HepG2ENCSR009PPIFXR1HepG2ReleasedENCSR237YZT   shRNAKD% = ,






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
FXR1315K562ENCSR774RFNENCSR562BJWENCAB162GMEA303-892A1ReleasedENCODE3
FXR14036K562ENCSR248TXPENCSR111UKNENCAB076XDI7024102038609ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
FXR1ENCAB076XDI7024102038609Released, ENCODE4BGKLV08-29, Released, ENCODE4
FXR1ENCAB712TFOA303-892A1Released, ENCODE3Released, ENCODE3BGKLV08-29, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
FXR1K562shRNAENCSR780YFFENCSR913CAEFXR1-LV08-29,FXR1-LV08-30Nontarget-LV08-1_00003527,nontarget-LV08-2_0000352796.1,74.5ReleasedENCODE3
FXR1HepG2shRNAENCSR009PPIENCSR237YZTFXR1-BGHLV12-29,FXR1-BGHLV12-30NT-BGHLV12-01,NT-BGHLV12-02,ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    FXR1: Click to RBP Image Database
  • Nuclei
  • Unknown Nuclear Foci
  • Cytoplasm
  • Cytosolic
  • Cell Cortex












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    FXR1Product_ID: A303-892A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: FXR1-human    		 HepG2_Bethyl_A303-892A_1_FXR1.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using FXR1specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-FXR1 antibody (lanes under 'FXR1').
    		 K562_Bethyl_A303-892A_1_FXR1.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using FXR1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-FXR1 antibody (lanes under 'FXR1').
    		 FXR1_Secondary_Western.png<br>Caption: Western blot following shRNA against FXR1 in K562 whole cell lysate using FXR1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against FXR1. FXR1 protein appears as the green band, Tubulin serves as a control and appears in red.
    FXR1Product_ID: 702410
    Lot_ID: 2038609
    Source: Thermo Fisher
    Target Name: FXR1-human    		 ThermoFisher_702410_2038609_FXR1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the FXR1 specific antibody, 702410. Lanes 1 and 3 are 2.5% of five million whole cell lysate input. Lanes 2 and 4 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the FXR1-specific antibody, 702410. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    		 FXR1-K562-702410.png<br>Caption: Western blot following shRNA against FXR1 in K562 whole cell lysate using FXR1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNA against FXR1. FXR1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








    RNA Targets
    • FXR1 protein binds to 1,376 RNA regions.  





    Proteins bound to RNA
    • FXR1 RNA is bound by 28 proteins.  






    FXR1 protein has 1,376 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 1,376 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    FXR1chr162419211524192246+3.043573.37449K562PRKCBCDS
    FXR1chrX153592406153592432-3.267964.45887K562FLNA5'-UTR,CDS,intron-Distal
    FXR1chrX153594752153594774-3.097993.77049K562FLNACDS,intron-Distal
    FXR1chr84871602448716037-4.481456.71780K562PRKDCCDS,intron-Distal
    FXR1chr77289163272891765-4.339605.99348K562BAZ1BCDS,intron-Distal
    FXR1chr172966375329663892+3.304185.15914K562NF13'-UTR,CDS
    FXR1chrX153583293153583364-4.0179612.63472K562FLNA3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal
    FXR1chr178044338180443479+3.276033.19855K562NARF3'-UTR,CDS,intron-Distal
    FXR1chr174573848445738516+4.138553.18004K562KPNB1CDS,intron-Proximal
    FXR1chr2230668722230668781-3.821453.55391K562TRIP12CDS,intron-Distal
    FXR1chr11943154719431595-3.714206.99282K562UBR4CDS,intron-Distal
    FXR1chrX5358569753585752-4.286495.62737K562HUWE1CDS,intron-Distal
    FXR1chr1715649361564992-4.932646.56854K562PRPF8CDS,intron-Distal
    FXR1chr25414803354148185-3.457197.46786K562PSME45'-UTR,CDS,intron-Distal
    FXR1chr84884035948840413-5.4861414.96779K562PRKDCCDS,intron-Distal
    FXR1chrX5364394753643977-3.835063.92527K562HUWE1CDS,intron-Distal
    FXR1chr172696184226961868-3.616353.44491K562KIAA0100CDS,intron-Distal
    FXR1chr33687422036874334-3.158064.26316K562TRANK1CDS,intron-Distal
    FXR1chr156395521963955290-4.087895.07849K562HERC1CDS,intron-Distal
    FXR1chrX3992371639923783-4.472175.80976K562BCOR5'-UTR,CDS,intron-Distal
    FXR1chr84873427748734314-4.3010011.26072K562PRKDCCDS,intron-Distal
    FXR1chr2230659999230660047-4.098704.86533K562TRIP12CDS,intron-Distal,intron-Proximal
    FXR1chr107114459671144651+4.034613.55204K562HK1CDS
    FXR1chr11689370116893785-4.827894.34347K562NBPF13'-UTR,CDS,intron-Distal
    FXR1chr126481392764814013+4.259284.48707K562XPOTCDS
    FXR1chr1220160633220160696-5.311806.18239K562EPRSCDS,intron-Distal,intron-Proximal
    FXR1chr213492612334926150+4.078904.48707K562SONCDS,intron-Distal
    FXR1chr213853811438538255+4.754426.93901K562TTC3CDS
    FXR1chr1827758082775884+3.562323.18236K562SMCHD13'-UTR,CDS
    FXR1chr10120828994120829052-4.085513.92702K562EIF3ACDS,intron-Distal
    FXR1chr173554915135549246-4.002344.11230K562ACACACDS,intron-Distal
    FXR1chr1715784581578558-3.814156.92158K562PRPF8CDS,intron-Distal
    FXR1chr1266918686691910-3.152983.55107K562CHD4CDS,intron-Distal
    FXR1chr14102506014102506068+4.385013.55391K562DYNC1H1CDS
    FXR1chr172702466127024741+4.004853.74028K562SUPT6HCDS
    FXR1chr14102457955102458006+4.379914.86533K562DYNC1H1CDS
    FXR1chr116228800162288041-4.129524.69749K562AHNAKCDS,intron-Distal
    FXR1chrX5359070753590739-3.952574.34347K562HUWE1CDS,intron-Distal
    FXR1chr116582477065824845+4.578764.11230K562SF3B2CDS
    FXR1chr1137238963724008-3.792613.18004K562NUP98CDS,intron-Distal,intron-Proximal
    FXR1chr116535008765350232+4.181364.11409K562EHBP1L1CDS,intron-Distal
    FXR1chr5154191167154191179+3.799523.36793K562LARP1CDS
    FXR1chrX5358984553589889-3.267594.25641K562HUWE1CDS,intron-Distal
    FXR1chr172694805026948107-4.182223.77127K562KIAA0100CDS,intron-Distal
    FXR1chr177831699378317078+4.086773.18236K562RNF213CDS
    FXR1chr77285676372856848-4.477887.09523K562BAZ1BCDS,intron-Distal
    FXR1chr23265593532656026+3.847824.17020K562BIRC6CDS
    FXR1chr11948891819488955-4.412325.99922K562UBR4CDS,intron-Distal
    FXR1chr24420704744207087-4.560735.05379K562LRPPRCCDS,intron-Distal
    FXR1chrX153582846153582851-4.456853.92702K562FLNA3'-UTR,5'-UTR,CDS,intron-Distal
    FXR1chr1186302392186302471-3.693766.98796K562TPRCDS,intron-Distal
    FXR1chr116230002662300076-3.458605.70401K562AHNAKCDS,intron-Distal
    FXR1chrX153588577153588599-3.970614.80246K562FLNA5'-UTR,CDS,intron-Distal
    FXR1chr84880023148800260-4.6306714.92587K562PRKDCCDS,intron-Distal
    FXR1chr29695880196958833-4.7407111.27933K562SNRNP200CDS,intron-Distal
    FXR1chr11120348868120348998+4.264325.99459K562ARHGEF12CDS
    FXR1chr84884839848848452-3.9308013.31812K562PRKDCCDS,intron-Distal
    FXR1chr84869473548694785-3.8657112.20955K562PRKDCCDS,intron-Distal
    FXR1chr8103307301103307340-4.020033.55204K562UBR5CDS,intron-Distal,intron-Proximal
    FXR1chr111082475610824808-3.458604.47738K562EIF4G2CDS,intron-Distal,intron-Proximal
    FXR1chr14102551715102551761-5.149148.28278K562HSP90AA15'-UTR,CDS,intron-Distal
    FXR1chr5154181857154181946+3.402216.75023K562LARP1CDS
    FXR1chr1266965606696586-4.045794.88762K562CHD4CDS,intron-Distal
    FXR1chr25413549054135553-3.623303.36587K562PSME43'-UTR,CDS,intron-Distal,intron-Proximal
    FXR1chr29695648696956548-3.003594.84578K562SNRNP200CDS,intron-Distal
    FXR1chr93571774035717782-4.485645.24248K562TLN1CDS,intron-Distal
    FXR1chrX4103112241031171+3.518193.08726K562USP9XCDS
    FXR1chr63159357931593643+3.419494.08434K562PRRC2ACDS
    FXR1chr14102510318102510377+3.243634.27102K562DYNC1H1CDS
    FXR1chr13990784839907978+3.820447.11354K562MACF1CDS
    FXR1chr11949452519494546-4.090124.11230K562UBR4CDS,intron-Distal
    FXR1chrX153587474153587492-4.387599.03272K562FLNA3'-UTR,CDS,intron-Distal
    FXR1chr84869771848697732-3.500136.23216K562PRKDCCDS,intron-Distal
    FXR1chr1266918006691867-3.949538.28827K562CHD4CDS,intron-Distal
    FXR1chrX5361658253616617-3.838424.11409K562HUWE1CDS,intron-Distal
    FXR1chrX153577842153577880-5.155338.28278K562FLNA3'-UTR,CDS,intron-Distal
    FXR1chr29696455296964562-3.986123.18004K562SNRNP200CDS,intron-Distal,intron-Proximal
    FXR1chr116107779461077866-4.439144.48707K562DDB15'-UTR,CDS,intron-Distal
    FXR1chr1715644121564445-4.327094.67478K562PRPF8CDS,intron-Distal
    FXR1chrX4107573241075786+3.760603.74028K562USP9XCDS
    FXR1chr11950006919500111-3.882426.80865K562UBR4CDS,intron-Distal
    FXR1chr175775963457759703+4.7762711.09151K562CLTCCDS,intron-Proximal
    FXR1chr2152321027152321125+3.486123.08726K562RIF1CDS
    FXR1chr1715851971585267-3.862284.80246K562PRPF8CDS,intron-Distal
    FXR1chr11948038419480432-4.084328.47413K562UBR4CDS,intron-Distal
    FXR1chr161885357318853703-3.921604.48916K562SMG1CDS,intron-Distal
    FXR1chr11947820019478222-4.019423.73851K562UBR4CDS,intron-Distal,intron-Proximal
    FXR1chr9133748265133748311+4.310884.30147K562ABL1CDS
    FXR1chr11949941419499442-5.197199.78318K562UBR4CDS,intron-Distal
    FXR1chr8103277356103277445-3.325284.07710K562UBR5CDS,intron-Distal,intron-Proximal
    FXR1chr26172405361724141-4.534236.87755K562XPO13'-UTR,CDS,intron-Distal,intron-Proximal
    FXR1chr8103273386103273479-4.023254.88762K562UBR5CDS,intron-Distal
    FXR1chr5154173192154173248+3.943763.36587K562LARP13'-UTR,CDS
    FXR1chr1220146579220146589-4.652793.18236K562EPRSCDS,intron-Distal,intron-Proximal
    FXR1chr11944667819446728-5.5581113.65052K562UBR4CDS,intron-Distal
    FXR1chr3184042017184042042+3.865333.07416K562EIF2B5, EIF4G13'-UTR,5'-UTR,CDS,intron-Distal
    FXR1chr175775829757758317+3.848804.80246K562CLTCCDS,intron-Distal
    FXR1chr5154179287154179319+3.285626.21542K562LARP1CDS
    FXR1chr1715626621562713-3.803515.34077K562PRPF8CDS,intron-Distal,intron-Proximal
    FXR1chr168569978185699872+3.695573.73851K562GSE1CDS




    28 proteins are bound to FXR1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr3180694203180694295+3'-UTR3.425123.81856K562IGF2BP1
    chr3180694116180694185+3'-UTR5.233886.56044K562IGF2BP1
    chr3180694877180694942+3'-UTR3.055563.98039HepG2FUBP3
    chr3180665651180665718+3'-UTR,CDS,intron-Proximal3.902323.86133K562HLTF
    chr3180693988180694075+3'-UTR,CDS3.683656.18214HepG2GRWD1
    chr3180693950180693959+3'-UTR,CDS4.357124.23276K562PABPC4
    chr3180694161180694210+3'-UTR4.1184610.31453K562PABPC4
    chr3180693959180694004+3'-UTR,CDS4.317149.96973K562PABPC4
    chr3180693984180694066+3'-UTR,CDS3.068989.37943HepG2BCLAF1
    chr3180651123180651170+3'-UTR,5'-UTR,CDS,intron-Distal3.326244.65365HepG2GRWD1
    chr3180694615180694674+3'-UTR4.193574.25090K562IGF2BP2
    chr3180694384180694451+3'-UTR4.359776.00093K562FAM120A
    chr3180665652180665724+3'-UTR,CDS,intron-Proximal3.5835515.52439HepG2BCLAF1
    chr3180694674180694739+3'-UTR4.590536.59996K562PUM2
    chr3180630511180630621+5'-UTR,CDS,intron-Distal,intron-Proximal5.3219916.83003HepG2PRPF8
    chr3180630460180630527+5'-UTR,CDS,intron-Distal,intron-Proximal3.898433.58172HepG2SRSF1
    chr3180630517180630570+5'-UTR,CDS,intron-Distal,intron-Proximal3.118604.38107K562AQR
    chr3180679275180679342+CDS4.1247415.27481HepG2BCLAF1
    chr3180666567180666583+CDS3.627856.47196HepG2BCLAF1
    chr3180679270180679317+CDS3.341534.24070HepG2GRWD1
    chr3180688853180688947+CDS,intron-Distal,intron-Proximal3.169374.89227HepG2KHSRP
    chr3180667014180667051+CDS,intron-Proximal3.392539.33743HepG2BCLAF1
    chr3180686014180686078+CDS,intron-Proximal3.686566.08629HepG2PRPF8
    chr3180671549180671568+CDS,intron-Proximal3.376936.33024HepG2BCLAF1
    chr3180669255180669306+CDS,intron-Proximal3.153073.93669K562AQR
    chr3180679324180679429+CDS,intron-Proximal3.000817.68340K562EFTUD2
    chr3180671598180671630+CDS,intron-Proximal6.0804034.14662K562LIN28B
    chr3180675689180675714+CDS3.803587.89260HepG2BCLAF1
    chr3180679256180679275+CDS3.534646.47196HepG2BCLAF1
    chr3180669192180669256+CDS3.376828.95936K562ZNF622
    chr3180687978180688089+CDS4.352764.08466HepG2IGF2BP1
    chr3180675605180675624+CDS,intron-Proximal3.424229.16275K562LIN28B
    chr3180685898180685994+CDS3.3243613.83189K562UCHL5
    chr3180685840180685881+CDS4.005253.98564K562LIN28B
    chr3180667051180667131+CDS4.3918914.68146HepG2BCLAF1
    chr3180666183180666234+CDS3.258288.77086HepG2BCLAF1
    chr3180675635180675689+CDS3.5081410.11361HepG2BCLAF1
    chr3180671588180671630+CDS,intron-Proximal3.814885.14848K562ZNF622
    chr3180669086180669091+CDS3.215664.26492HepG2BCLAF1
    chr3180666994180667060+CDS,intron-Proximal4.807824.97857HepG2AQR
    chr3180671614180671630+CDS,intron-Proximal3.279523.44907HepG2LIN28B
    chr3180671597180671647+CDS,intron-Proximal3.194475.69345HepG2BCLAF1
    chr3180680670180680722+CDS,intron-Proximal4.043667.06194K562LIN28B
    chr3180679320180679343+CDS,intron-Proximal3.552514.96321K562LIN28B
    chr3180685828180685896+CDS,intron-Proximal3.624895.00298K562U2AF2
    chr3180666584180666603+CDS,intron-Proximal3.261076.64701HepG2BCLAF1
    chr3180669189180669256+CDS4.1034113.65695HepG2BCLAF1
    chr3180630795180630909+intron-Distal4.471125.77834HepG2XRN2
    chr3180693643180693721+intron-Distal3.950973.20552HepG2KHSRP
    chr3180630554180630600+intron-Distal,intron-Proximal3.589655.29427HepG2RBM22
    chr3180689006180689048+intron-Distal,intron-Proximal3.316626.46022K562KHSRP
    chr3180687814180687880+intron-Distal,intron-Proximal3.235967.42856K562KHSRP
    chr3180689099180689162+intron-Distal5.414968.68064HepG2QKI
    chr3180630540180630625+intron-Distal,intron-Proximal4.059214.77381HepG2TIA1
    chr3180689485180689524+intron-Distal4.569715.20135HepG2QKI
    chr3180656084180656182+intron-Distal4.294804.51735HepG2QKI
    chr3180681661180681749+intron-Distal4.016615.99890HepG2U2AF2
    chr3180636834180636963+intron-Distal4.958176.58335HepG2QKI
    chr3180656878180656931+intron-Distal3.069163.00168K562XRCC6
    chr3180650210180650261+intron-Distal3.111603.90146K562KHSRP
    chr3180652403180652479+intron-Distal3.285924.96160K562KHSRP
    chr3180652618180652731+intron-Distal3.086808.86022K562KHSRP
    chr3180630778180630893+intron-Distal4.334684.64592HepG2HNRNPM
    chr3180674347180674402+intron-Distal3.628307.36622HepG2U2AF2
    chr3180651261180651325+intron-Distal,intron-Proximal3.089426.21868K562KHSRP
    chr3180671771180671815+intron-Distal4.384434.53454K562PRPF8
    chr3180630549180630643+intron-Distal,intron-Proximal4.263769.93297HepG2EFTUD2
    chr3180689013180689062+intron-Distal,intron-Proximal4.002263.73609HepG2KHSRP
    chr3180681686180681731+intron-Distal4.375784.40847HepG2PTBP1
    chr3180689505180689534+intron-Distal6.9114918.28542K562QKI
    chr3180630883180630947+intron-Distal4.784625.69834HepG2NKRF
    chr3180693785180693859+intron-Distal,intron-Proximal4.355035.25174K562KHSRP
    chr3180673452180673571+intron-Distal4.419644.64592HepG2HNRNPM
    chr3180652631180652705+intron-Distal3.082493.29213HepG2KHSRP
    chr3180689074180689201+intron-Distal3.1533016.51886K562KHSRP
    chr3180685271180685322+intron-Distal4.722136.58335HepG2QKI
    chr3180689103180689159+intron-Distal3.935337.22647K562QKI
    chr3180681786180681905+intron-Distal3.543907.84449K562KHSRP
    chr3180630560180630638+intron-Distal,intron-Proximal3.100783.41957K562DROSHA
    chr3180630891180630945+intron-Distal5.020034.54675K562XRN2
    chr3180689534180689599+intron-Distal5.2420927.65100K562QKI
    chr3180630543180630589+intron-Distal,intron-Proximal3.7342510.68321K562TIA1
    chr3180689466180689505+intron-Distal6.4517313.16771K562QKI
    chr3180667178180667236+intron-Distal,intron-Proximal3.027318.11691K562AQR
    chr3180667138180667172+intron-Proximal4.199633.32531K562AQR
    chr3180667174180667228+intron-Proximal3.515954.35635K562PRPF8
    chr3180665724180665786+intron-Proximal3.218146.69302K562AQR
    chr3180675545180675600+intron-Proximal3.193164.94119K562SF3B4
    chr3180665571180665616+intron-Proximal4.247164.07352K562KHSRP
    chr3180665754180665793+intron-Proximal4.026653.19904K562TIA1
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein FXR1 and its RNA.



    Diffrential Expression
    • 13,586 differentially expressed genes after Knockdown/Knockout FXR1 protein.  





    • 88 RBPs can affect the levels of FXR1.  







    13,586 differentially expressed genes after Knockdown/Knockout FXR1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 13,586 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    DPM1ENSG00000000419.81786.535702321.89590-0.378102.966602.24910HepG2FXR1
    SCYL3ENSG00000000457.9211.06340113.179600.899004.262503.41750HepG2FXR1
    CYP51A1ENSG00000001630.116965.7502014206.31560-1.0282020.7803019.07030HepG2FXR1
    MYH16ENSG00000002079.814.841300.0000099999.999904.102503.27130HepG2FXR1
    LAP3ENSG00000002549.81609.603302186.72750-0.442103.866503.05780HepG2FXR1
    CD99ENSG00000002586.132567.871103312.94180-0.367503.001802.27970HepG2FXR1
    MAD1L1ENSG00000002822.11610.88180377.654800.693702.830902.13040HepG2FXR1
    LASP1ENSG00000002834.139401.799207491.485200.327602.724302.03850HepG2FXR1
    CYP26B1ENSG00000003137.417.138000.514905.056503.972703.15370HepG2FXR1
    DBNDD1ENSG00000003249.91191.10840755.732000.656302.745402.05690HepG2FXR1
    CASP10ENSG00000003400.10846.958701126.26120-0.411202.861002.15700HepG2FXR1
    TFPIENSG00000003436.106479.3258021892.58150-1.7565043.4559041.12560HepG2FXR1
    RBM5ENSG00000003756.123087.231702316.035600.414603.686902.89690HepG2FXR1
    MTMR7ENSG00000003987.92.8595017.60600-2.622202.488801.83200HepG2FXR1
    SLC7A2ENSG00000003989.125071.6005013857.03180-1.4501041.3834039.11160HepG2FXR1
    POLDIP2ENSG00000004142.72295.965302892.65500-0.333302.520301.85840HepG2FXR1
    PLXND1ENSG00000004399.82807.018601835.966300.612402.800002.10370HepG2FXR1
    AK2ENSG00000004455.122890.081104116.82720-0.510405.519704.56530HepG2FXR1
    FKBP4ENSG00000004478.51659.165202054.76790-0.308502.121101.51190HepG2FXR1
    RECQLENSG00000004700.11920.99340649.520600.503702.676101.99560HepG2FXR1
    ARHGAP33ENSG00000004777.14373.72510110.218601.7615016.2226014.69580HepG2FXR1
    NDUFAB1ENSG00000004779.51771.513102269.37120-0.357302.643801.96760HepG2FXR1
    ZMYND10ENSG00000004838.922.552804.814702.227702.450701.79830HepG2FXR1
    ST7ENSG00000004866.14367.39770508.53890-0.469002.101601.49550HepG2FXR1
    SLC25A5ENSG00000005022.55905.1698010682.99930-0.8553015.1621013.67970HepG2FXR1
    DHX33ENSG00000005100.81463.60050952.827900.619106.245505.23290HepG2FXR1
    SPPL2BENSG00000005206.12650.10920412.115000.657504.334503.48310HepG2FXR1
    FAM214BENSG00000005238.15295.00070195.627400.592502.764502.07300HepG2FXR1
    CREBBPENSG00000005339.82079.395701616.384800.363302.719002.03420HepG2FXR1
    PON1ENSG00000005421.46.1525026.31370-2.096602.615201.94310HepG2FXR1
    GCFC2ENSG00000005436.9572.20610911.31830-0.671406.063505.06480HepG2FXR1
    ABCB4ENSG00000005471.11887.812901167.99730-0.395702.755602.06540HepG2FXR1
    ZNF195ENSG00000005801.12614.12120413.366600.571003.907303.09470HepG2FXR1
    ITGALENSG00000005844.1335.70580261.11810-2.8705029.0720027.13100HepG2FXR1
    ITGA3ENSG00000005884.13239.4534014.372104.0583038.8120036.60370HepG2FXR1
    ZFXENSG00000005889.11793.479501857.62210-1.2272015.9686014.44970HepG2FXR1
    LAMP2ENSG00000005893.114863.514806080.58500-0.322202.591701.92270HepG2FXR1
    ASB4ENSG00000005981.8136.6252033.775302.0161010.487809.22510HepG2FXR1
    CRLF1ENSG00000006016.610014.681603568.618601.4886013.8794012.45020HepG2FXR1
    OSBPL7ENSG00000006025.7357.41620143.993801.311509.095607.90580HepG2FXR1
    TMEM98ENSG00000006042.71941.949302769.42890-0.512105.163304.23810HepG2FXR1
    TMEM132AENSG00000006118.101208.56480828.261900.545002.459001.80550HepG2FXR1
    AP2B1ENSG00000006125.124887.877206016.54110-0.299702.309801.67530HepG2FXR1
    SPATA20ENSG00000006282.152412.700201363.536400.8232010.637409.36620HepG2FXR1
    MAP3K9ENSG00000006432.11655.83920444.345500.561603.904103.09190HepG2FXR1
    BAIAP2L1ENSG00000006453.91024.32770813.674100.332101.955901.36980HepG2FXR1
    ETV1ENSG00000006468.910.183200.0000099999.999902.767402.07560HepG2FXR1
    ALDH3B1ENSG00000006534.11255.99090137.588000.895604.972204.06440HepG2FXR1
    COX10ENSG00000006695.6332.96550485.27340-0.543403.260102.51140HepG2FXR1
    PAF1ENSG00000006712.101177.62750894.376300.396802.772802.08010HepG2FXR1
    ELAC2ENSG00000006744.141188.51680816.815400.541004.576203.70250HepG2FXR1
    ADIPOR2ENSG00000006831.93706.310506830.59680-0.8820015.6202014.11560HepG2FXR1
    PROM1ENSG00000007062.7916.42670661.168400.470903.366102.60680HepG2FXR1
    CCDC124ENSG00000007080.6521.31690243.759101.0966010.652509.38100HepG2FXR1
    GAS7ENSG00000007237.14137.3251062.782001.129104.576303.70250HepG2FXR1
    TRAPPC6AENSG00000007255.6189.25620334.37390-0.821102.876902.17080HepG2FXR1
    PAX6ENSG00000007372.1644.265401.653004.742909.699208.47310HepG2FXR1
    RPUSD1ENSG00000007376.3304.46200166.460800.871002.978202.25920HepG2FXR1
    RHBDF1ENSG00000007384.11370.62600118.555601.6443016.5197014.97660HepG2FXR1
    PIGQENSG00000007541.10477.88070265.052000.850303.848603.04230HepG2FXR1
    DNAJC11ENSG00000007923.111671.828001361.358800.296301.876201.30220HepG2FXR1
    MYLIPENSG00000007944.10213.01810116.846100.866304.139903.30540HepG2FXR1
    E2F2ENSG00000007968.6278.81320113.792501.292809.340208.13800HepG2FXR1
    CDK11AENSG00000008128.18727.61190430.514100.757006.752605.70130HepG2FXR1
    CYTH3ENSG00000008256.11292.47230152.681100.937705.871204.88850HepG2FXR1
    SYPL1ENSG00000008282.31632.383102210.02910-0.437103.855603.04850HepG2FXR1
    SPAG9ENSG00000008294.164115.230605227.27540-0.345102.903802.19400HepG2FXR1
    PLEKHG6ENSG00000008323.11439.74880783.89460-0.834005.246204.31420HepG2FXR1
    MGST1ENSG00000008394.81746.710802674.82320-0.614807.163406.08600HepG2FXR1
    NFIXENSG00000008441.12596.36360408.211800.546803.569002.78950HepG2FXR1
    ST3GAL1ENSG00000008513.101076.407002786.38530-1.3722030.7586028.76500HepG2FXR1
    IL32ENSG00000008517.122319.610603665.01360-0.659906.368105.34190HepG2FXR1
    MED24ENSG00000008838.132792.101702114.464500.401003.358002.59960HepG2FXR1
    RHOBTB2ENSG00000008853.12590.33250428.923100.460702.689602.00750HepG2FXR1
    SEC62ENSG00000008952.122611.952003963.96760-0.601805.614804.65090HepG2FXR1
    RPS20ENSG00000008988.59058.0106014646.64670-0.6933010.459809.19910HepG2FXR1
    CSDE1ENSG00000009307.1111701.1993014829.17160-0.341803.002602.28030HepG2FXR1
    MASP2ENSG00000009724.12173.43760307.93160-0.828205.021204.11040HepG2FXR1
    POMT2ENSG00000009830.7648.83870437.615200.568103.957303.14000HepG2FXR1
    VTA1ENSG00000009844.111321.781202368.88950-0.8417012.2177010.86820HepG2FXR1
    SPRTNENSG00000010072.11268.15870149.122800.846504.646603.76580HepG2FXR1
    METTL13ENSG00000010165.15828.34830581.485800.510403.673302.88460HepG2FXR1
    UQCRC1ENSG00000010256.64475.509606086.81300-0.443604.492803.62570HepG2FXR1
    CD9ENSG00000010278.7244.55290517.45760-1.0813010.372809.11910HepG2FXR1
    NCAPD2ENSG00000010292.85654.533603439.531000.7171010.409609.15260HepG2FXR1
    SEMA3GENSG00000010319.2481.94920943.99580-0.969904.952404.04630HepG2FXR1
    NISCHENSG00000010322.111920.244601356.074800.501803.488202.71700HepG2FXR1
    FYNENSG00000010810.131017.11430797.592500.350702.150701.53700HepG2FXR1
    HIVEP2ENSG00000010818.4937.151001188.20860-0.342402.202401.58210HepG2FXR1
    CLCN6ENSG00000011021.172026.829302769.15010-0.450204.184703.34680HepG2FXR1
    TSPAN9ENSG00000011105.71319.511303331.31450-1.3361030.4111028.42820HepG2FXR1
    APBA3ENSG00000011132.7287.03860154.390600.894605.329004.38920HepG2FXR1
    PTBP1ENSG00000011304.126822.078805299.966900.364103.164302.42510HepG2FXR1
    DPF1ENSG00000011332.1565.3427027.570101.244802.834802.13370HepG2FXR1
    SYT7ENSG00000011347.5221.81730608.70020-1.4564012.1887010.84000HepG2FXR1
    PLAURENSG00000011422.781.1803031.869901.348803.804903.00380HepG2FXR1
    ANLNENSG00000011426.62865.420701494.359200.9391015.4155013.92240HepG2FXR1
    WIZENSG00000011451.13902.06150503.357700.841503.026502.30190HepG2FXR1
    MAP4K3ENSG00000011566.102187.485804795.27830-1.1323023.7381021.93300HepG2FXR1
    TMEM159ENSG00000011638.6399.98550153.793301.3789013.3039011.90600HepG2FXR1
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    88 RBPs can affect the gene expression of FXR1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    FXR1ENSG00000114416.132469.574903031.84850-0.295903.784902.44310HepG2DDX1
    FXR1ENSG00000114416.133432.690902730.230600.330203.642102.58460HepG2DDX24
    FXR1ENSG00000114416.132046.667002618.91200-0.355702.243101.54010HepG2DDX55
    FXR1ENSG00000114416.132275.362303028.92040-0.412707.780706.75470HepG2DKC1
    FXR1ENSG00000114416.132257.090202946.73770-0.384709.204908.09680HepG2DNAJC2
    FXR1ENSG00000114416.132173.222503456.39490-0.669406.464205.11300HepG2EEF2
    FXR1ENSG00000114416.132949.058804321.35840-0.551206.257205.38420HepG2EIF2S1
    FXR1ENSG00000114416.132592.155604775.61970-0.8815012.3479011.02820HepG2EIF4A3
    FXR1ENSG00000114416.132293.251104649.71560-1.0197012.8136011.38880HepG2EIF4B
    FXR1ENSG00000114416.135095.339604376.342100.219402.994402.12920HepG2EIF4G1
    FXR1ENSG00000114416.133988.664705812.17250-0.5432016.4116015.14620HepG2ETF1
    FXR1ENSG00000114416.13634.533304818.36780-2.92480126.92740123.32990HepG2FXR1
    FXR1ENSG00000114416.133284.492204469.75970-0.444503.916703.13200HepG2G3BP1
    FXR1ENSG00000114416.131537.788202498.44690-0.700207.609306.15220HepG2GEMIN5
    FXR1ENSG00000114416.133393.747104635.98870-0.450004.010003.25210HepG2GPKOW
    FXR1ENSG00000114416.132145.444003001.35840-0.484306.298805.38230HepG2HNRNPA1
    FXR1ENSG00000114416.131692.493603338.49380-0.9800022.0711020.31860HepG2HNRNPC
    FXR1ENSG00000114416.133580.345204424.18910-0.305302.410501.81760HepG2HNRNPLL
    FXR1ENSG00000114416.132483.998703316.41890-0.417009.141208.08820HepG2HNRNPU
    FXR1ENSG00000114416.132911.434703453.11940-0.246202.211801.55980HepG2IGF2BP1
    FXR1ENSG00000114416.132790.425904543.41910-0.703309.894108.70360HepG2IGF2BP2
    FXR1ENSG00000114416.133975.475106024.31670-0.599705.595104.40080HepG2LARP4
    FXR1ENSG00000114416.133747.476304820.04980-0.363102.986502.30620HepG2MAGOH
    FXR1ENSG00000114416.131838.079704847.03230-1.3989030.0052028.10430HepG2MATR3
    FXR1ENSG00000114416.133310.416204511.60540-0.446602.299201.42140HepG2MTPAP
    FXR1ENSG00000114416.133382.966804961.21140-0.552405.904004.99620HepG2NCBP2
    FXR1ENSG00000114416.133305.247704398.89910-0.412406.929205.72920HepG2NOL12
    FXR1ENSG00000114416.133382.963504418.30190-0.385203.229802.45130HepG2PABPC4
    FXR1ENSG00000114416.133310.004604455.72620-0.428804.635703.88470HepG2PCBP1
    FXR1ENSG00000114416.133725.996703095.079600.267503.861302.96080HepG2PRPF4
    FXR1ENSG00000114416.131184.479503585.49640-1.5979015.9415013.45060HepG2PRPF6
    FXR1ENSG00000114416.133226.825304534.12370-0.490709.356008.46700HepG2PTBP1
    FXR1ENSG00000114416.133102.161704199.06060-0.436805.858005.03460HepG2PUF60
    FXR1ENSG00000114416.132810.515204457.40200-0.6654032.2019030.62890HepG2PUM1
    FXR1ENSG00000114416.132806.568303224.67080-0.200302.764102.14860HepG2PUS1
    FXR1ENSG00000114416.134109.780304910.02290-0.256702.926902.28730HepG2QKI
    FXR1ENSG00000114416.134638.767903291.776200.494802.611901.92650HepG2RAVER1
    FXR1ENSG00000114416.133745.571605045.83190-0.429907.446306.63530HepG2NELFE
    FXR1ENSG00000114416.134067.405404699.89210-0.208501.851901.33310HepG2RECQL
    FXR1ENSG00000114416.133121.304803777.27360-0.275202.348001.71050HepG2RPLP0
    FXR1ENSG00000114416.131527.302302730.19890-0.8380010.528309.42360HepG2RPS19
    FXR1ENSG00000114416.132081.392003293.55770-0.662107.783306.48520HepG2RPS2
    FXR1ENSG00000114416.132317.273304408.22480-0.9278011.019309.46480HepG2RPS3A
    FXR1ENSG00000114416.132555.320802953.39560-0.208902.946602.28700HepG2SAFB2
    FXR1ENSG00000114416.131860.811302740.45500-0.558504.970803.72290HepG2SERBP1
    FXR1ENSG00000114416.133554.589804720.14950-0.409107.867806.95180HepG2SF3B4
    FXR1ENSG00000114416.133381.664604026.06750-0.251604.996904.09730HepG2SLBP
    FXR1ENSG00000114416.132762.450203444.12110-0.318207.521706.54040HepG2SMN1
    FXR1ENSG00000114416.133482.115804145.85740-0.251704.007303.27940HepG2SRSF5
    FXR1ENSG00000114416.132909.780603445.14790-0.243703.145602.40910HepG2SRSF7
    FXR1ENSG00000114416.134087.517504763.91870-0.220903.362602.80950HepG2SSB
    FXR1ENSG00000114416.134189.576104715.07050-0.170502.741102.12180HepG2SUCLG1
    FXR1ENSG00000114416.135071.433804429.100300.195302.303601.78390HepG2TAF15
    FXR1ENSG00000114416.133041.919004311.61720-0.503206.343705.30600HepG2TARDBP
    FXR1ENSG00000114416.131114.248603222.37980-1.5321064.0988062.29500HepG2TIAL1
    FXR1ENSG00000114416.132508.208903251.33680-0.374407.267006.42900HepG2TRIM56
    FXR1ENSG00000114416.133131.441604102.16360-0.389605.162803.92870HepG2TUFM
    FXR1ENSG00000114416.132750.387403498.75210-0.347206.911405.89000HepG2UPF1
    FXR1ENSG00000114416.132391.507603377.89380-0.498209.153308.16800HepG2UTP3
    FXR1ENSG00000114416.138082.790706336.895700.351006.989906.14730K562AGGF1
    FXR1ENSG00000114416.138269.442606593.916100.326603.710902.95130K562AKAP8L
    FXR1ENSG00000114416.138382.454506918.773300.276803.819102.73070K562ATP5C1
    FXR1ENSG00000114416.135863.684006842.97790-0.222802.384301.36380K562CPEB4
    FXR1ENSG00000114416.135965.223205143.077700.213801.992001.31810K562CPSF6
    FXR1ENSG00000114416.134778.660407079.58910-0.5671012.3253011.05560K562DDX47
    FXR1ENSG00000114416.132429.129003256.94790-0.423102.898601.58700K562EEF2
    FXR1ENSG00000114416.133653.407404228.06730-0.210802.415801.73600K562EIF2S2
    FXR1ENSG00000114416.132695.031003702.22520-0.458108.701707.29490K562EIF3G
    FXR1ENSG00000114416.133157.746403757.67670-0.250902.757401.60670K562EIF4B
    FXR1ENSG00000114416.136659.358208470.37600-0.347006.914305.44720K562EIF4G2
    FXR1ENSG00000114416.134320.549605232.98370-0.276402.289101.50870K562FMR1
    FXR1ENSG00000114416.134135.381803272.961000.337303.104101.67470K562FUS
    FXR1ENSG00000114416.131068.503204339.27200-2.0219086.0367083.11330K562FXR1
    FXR1ENSG00000114416.136224.654604755.474900.388302.550001.87630K562G3BP2
    FXR1ENSG00000114416.134395.904705634.50170-0.358104.137503.21660K562GRSF1
    FXR1ENSG00000114416.131439.743404308.94570-1.5815024.0594022.37130K562HNRNPC
    FXR1ENSG00000114416.132633.193103847.22760-0.547005.767104.03230K562HNRNPF
    FXR1ENSG00000114416.139917.242906997.481500.503008.450106.80360K562KIF1C
    FXR1ENSG00000114416.133897.099105654.99730-0.537108.062006.38610K562MATR3
    FXR1ENSG00000114416.133395.103204793.06690-0.497507.488306.01740K562METAP2
    FXR1ENSG00000114416.134049.853804916.93640-0.279904.663203.63500K562MTPAP
    FXR1ENSG00000114416.138652.122805494.591800.654904.054902.93030K562NAA15
    FXR1ENSG00000114416.132190.886603910.18120-0.835703.903901.69110K562PRPF6
    FXR1ENSG00000114416.132762.172303863.23580-0.484003.513602.47630K562PSIP1
    FXR1ENSG00000114416.133599.304505504.97690-0.6130011.9626010.63650K562PTBP1
    FXR1ENSG00000114416.138587.941409830.87610-0.195002.273901.31540K562PUM1
    FXR1ENSG00000114416.137746.528509631.41040-0.314205.860304.44660K562PUM2
    FXR1ENSG00000114416.1311689.857706538.720300.8381017.8030016.46100K562PUS1
    FXR1ENSG00000114416.139125.754406371.524200.5182012.7550011.48240K562RBM15
    FXR1ENSG00000114416.134427.158005279.53700-0.254002.064101.34330K562RBM22
    FXR1ENSG00000114416.134097.455805145.83600-0.328702.756201.38280K562RBM34
    FXR1ENSG00000114416.134020.627605555.65270-0.466504.163002.78790K562NELFE
    FXR1ENSG00000114416.132985.992104734.89450-0.665108.851606.94180K562RPS3
    FXR1ENSG00000114416.135375.804108765.21720-0.705303.228501.78200K562SFPQ
    FXR1ENSG00000114416.132482.169903340.56910-0.428503.864802.59060K562SRFBP1
    FXR1ENSG00000114416.134610.556105523.06660-0.260502.515301.61710K562SRPK2
    FXR1ENSG00000114416.133235.963104571.45000-0.498507.794905.89750K562SRSF4
    FXR1ENSG00000114416.134288.989705462.04170-0.348803.184502.42560K562TARDBP
    FXR1ENSG00000114416.134170.774105268.64890-0.337104.159703.12460K562TIA1
    FXR1ENSG00000114416.132105.850603715.89510-0.819308.351306.65530K562TIAL1
    FXR1ENSG00000114416.135526.250804760.453000.215102.089401.39250K562U2AF2
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    1,899 alternative splicing events after Knockdown/Knockout FXR1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 1,899 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEGOSR2ENSG00000108433.11chr17+4501239445012535450094324500956545015964450162770.076000.001060.04123includedK562FXR1
    SESDCCAG3ENSG00000165689.12chr9-1393045411393046911393022771393023901393047791393049790.272000.001530.05492includedK562FXR1
    SEPPIL2ENSG00000100023.13chr22+2202455222024665220242012202425122024854220249000.053000.000000.00001includedK562FXR1
    SEIMMP1LENSG00000148950.5chr11-3149126431491344314847183148485231531065315311500.215000.000110.00659includedK562FXR1
    SECLDND1ENSG00000080822.12chr3-9824049698240562982399769824028698241692982418290.092000.000080.00530includedK562FXR1
    SEAC079466.1ENSG00000266976.1chr19+2910287929103061290975942909801129103345291061360.272000.000000.00000includedK562FXR1
    SETBL1XR1ENSG00000177565.11chr3-1768162531768163291767827071767828101769149081769150130.294000.000000.00048includedK562FXR1
    SEILF3ENSG00000129351.13chr19+1079509110795152107945921079464610798021107983840.161000.000170.00965includedK562FXR1
    SEEEF1E1-BLOC1S5ENSG00000265818.1chr6-8027439802763280265998026658804137180415010.179000.000730.03057includedK562FXR1
    SEKTN1ENSG00000126777.13chr14+5613067256130759561282395612833056133958561340480.242000.000000.00021includedK562FXR1
    SEKTN1ENSG00000126777.13chr14+5613988956139973561396465613973056142552561426360.114000.000670.02836includedK562FXR1
    SETRAK2ENSG00000115993.7chr2-2022657402022658172022640992022642162022721252022723200.627000.000050.00379includedK562FXR1
    SELRRC42ENSG00000116212.10chr1+5441346054413494544117495441222254417658544181450.266000.000340.01667includedK562FXR1
    SEKDM5BENSG00000117139.12chr1-2027355242027356322027331762027332732027360532027361880.121000.000000.00003includedK562FXR1
    SEFOPNLENSG00000133393.8chr16-1597786415978062159736601597374515982414159824800.072000.001130.04346includedK562FXR1
    SEUBE2D2ENSG00000131508.11chr5+1389418281389419921389407501389414001389799561389800200.077000.000250.01277includedK562FXR1
    SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.245000.000000.00000includedK562FXR1
    SEPRC1ENSG00000198901.9chr15-9151029791510432915092799150988391512753915128530.225000.000540.02399includedK562FXR1
    SEDLG1ENSG00000075711.16chr3-1968885101968886091968766131968766671969212951969214600.238000.001950.06525includedK562FXR1
    SEMETAP1ENSG00000164024.7chr4+9992691999927017999168909991701899950017999500690.073000.000010.00113includedK562FXR1
    SEADD1ENSG00000087274.12chr4+2928368292840229277402927839292989729317890.055000.000370.01805includedK562FXR1
    SEXRCC2ENSG00000196584.2chr7-1523577851523578671523418631523464481523731251523732500.104000.000640.02743includedK562FXR1
    SEGOLGA8AENSG00000175265.13chr15-3472081534720905346997763469993634727583347276720.110000.000290.01466includedK562FXR1
    SERNF146ENSG00000118518.11chr6+1276071941276073221276013751276014851276077601276080360.319000.000510.02292includedK562FXR1
    SESAE1ENSG00000142230.7chr19+4770836047708386477069274770699747712415477138860.058000.000000.00001includedK562FXR1
    SEECDENSG00000122882.6chr10-7492349074923708749201917492030974927623749278220.162000.000010.00066includedK562FXR1
    SEMATR3ENSG00000015479.13chr5+1386429271386440161386147391386148181386503631386504250.056000.000000.00021includedK562FXR1
    SEMATR3ENSG00000015479.13chr5+1386513851386514271386503631386504251386517641386518770.068000.000030.00232includedK562FXR1
    SENUPL1ENSG00000139496.11chr13+2588338425883420258819432588208625887020258871700.183000.000000.00003includedK562FXR1
    SETMEM219ENSG00000149932.12chr16+2998336229983461299827282998289929984270299843690.152000.000000.00007includedK562FXR1
    SEATAD5ENSG00000176208.4chr17+2920644029206505292050202920511429214209292143900.203000.000030.00252includedK562FXR1
    SECNOT10ENSG00000182973.14chr3+3277890132778982327762913277646832800949328010630.127000.000030.00248includedK562FXR1
    SERNF34ENSG00000170633.12chr12+1218405441218406101218379211218380211218539611218541800.135000.002970.08807includedK562FXR1
    SESTARD4ENSG00000164211.8chr5-1108407121108407411108376591108377861108420271108420770.072000.000960.03809includedK562FXR1
    SESTARD4ENSG00000164211.8chr5-1108359641108361681108352821108358041108366991108368140.073000.000110.00691includedK562FXR1
    SEPRDM2ENSG00000116731.18chr1+1410491214109326140995721409968314113009141145740.243000.000070.00448includedK562FXR1
    SEMIA3ENSG00000154305.12chr1+2227966482227966932227945002227946342227981092227981960.093000.001630.05767includedK562FXR1
    SEMECRENSG00000116353.11chr1-2952788529528030295270272952710129528454295285570.090000.001610.05724includedK562FXR1
    SEVWDEENSG00000146530.7chr7-1242843312428583124231611242322712428752124289840.365000.000000.00021includedK562FXR1
    SEPITRM1ENSG00000107959.11chr10-3190362319048331897633189929319181231919450.180000.000890.03580includedK562FXR1
    SECPNE7ENSG00000178773.10chr16+8966037389660566896576238965766889661774896620110.407000.000140.00845includedK562FXR1
    SEMDC1ENSG00000137337.10chr6-3067534230676134306751603067523130679188306792810.264000.000460.02136includedK562FXR1
    SEPPIP5K2ENSG00000145725.15chr5+1025189341025191081025157211025158891025203721025204450.054000.002950.08789includedK562FXR1
    SEGCFC2ENSG00000005436.9chr2-7591910275919226759177637591784575921366759215530.275000.001650.05828includedK562FXR1
    SEIVNS1ABPENSG00000116679.11chr1-1852756161852757571852746671852747751852761451852762710.133000.000000.00003includedK562FXR1
    SEECHDC1ENSG00000093144.14chr6-1276375941276376471276360101276360411276481461276482890.201000.001560.05567includedK562FXR1
    SECEP57ENSG00000166037.6chr11+9552867995528723955236769552390795532395955325520.148000.000090.00596includedK562FXR1
    SEDSCR3ENSG00000157538.9chr21-3863401238634238386127963861294038639538386396410.071000.001450.05277includedK562FXR1
    SEDSCR3ENSG00000157538.9chr21-3860566238605743386046773860475238610760386109100.128000.002450.07749includedK562FXR1
    SETMEM126AENSG00000171202.2chr11+8536129285361385853590108535913385365106853653000.184000.000020.00143includedK562FXR1
    SEATP6V1HENSG00000047249.12chr8-5472372354723777547143585471445654727221547273260.137000.002140.06989includedK562FXR1
    SETMEM194AENSG00000166881.5chr12-5746301657463089574584285745852257464602574646760.406000.000130.00773includedK562FXR1
    SEUBE2F-SCLYENSG00000258984.1chr2+2389918882389919952389906852389908502389998582389999050.291000.000860.03474includedK562FXR1
    SECHCHD4ENSG00000163528.8chr3-1416341614163586141579251415802414166154141662490.094000.003090.09069includedK562FXR1
    SEGPBP1ENSG00000062194.11chr5+5653293956532999565317925653185956542126565423110.307000.000000.00000includedK562FXR1
    SEGPBP1ENSG00000062194.11chr5+5651720256517223565099475651002056526672565267960.122000.000050.00360includedK562FXR1
    SEATMENSG00000149311.13chr11+1080955101080955981080938421080939131080983211080984230.198000.003540.09989includedK562FXR1
    SEHMMRENSG00000072571.15chr5+1628947061628947541628917281628918081628966461628968350.361000.000000.00000includedK562FXR1
    SEDNAJC12ENSG00000108176.10chr10-6957579769575891695712816957142169583071695831500.052000.003130.09143includedK562FXR1
    SETRIM33ENSG00000197323.6chr1-1149734191149735341149703691149705161149762381149763550.151000.000020.00136includedK562FXR1
    SERPL7L1ENSG00000146223.10chr6+4284859842848704428474194284768942851188428513520.109000.000000.00000includedK562FXR1
    SESENP6ENSG00000112701.13chr6+7633246676332574763312477633134176333615763336760.220000.000840.03407includedK562FXR1
    SEPAPD4ENSG00000164329.9chr5+7891335278913422789088337890889878915434789156080.121000.000060.00436includedK562FXR1
    SEEMP3ENSG00000142227.6chr19+4883077748830887488286034882886748832608488327490.278000.000740.03081includedK562FXR1
    SEUBE2J2ENSG00000160087.16chr1-1191424119150511902841190867119237111925100.053000.000020.00170includedK562FXR1
    SEUBAP2LENSG00000143569.14chr1+1542418371542418881542412321542414301542426751542430400.259000.000160.00939includedK562FXR1
    SERP5-1000K24.2ENSG00000248503.2chrX+7717849577178539771662377716633277218119772203870.379000.000060.00421includedK562FXR1
    SEARHGEF1ENSG00000076928.13chr19+4239609542396194423928224239293642396401423964440.146000.000240.01259includedK562FXR1
    SELRRC40ENSG00000066557.5chr1-7065294770653021706504677065059770654774706549560.087000.002240.07260includedK562FXR1
    SEINIPENSG00000148153.9chr9-1154518061154518971154493961154499131154564101154565130.211000.001450.05277includedK562FXR1
    SEZFYVE16ENSG00000039319.12chr5+7972331079723364797038447970397279729927797300360.421000.003390.09690includedK562FXR1
    SEEIF4HENSG00000106682.10chr7+7360457673604636736041517360424873609070736092080.190000.000000.00000includedK562FXR1
    SEHHLA3ENSG00000197568.9chr1+7083261570832667708321267083222070833299708337060.266000.001830.06253includedK562FXR1
    SEPILRBENSG00000121716.14chr7+9995099599951635999508329995089399952765999528630.192000.002700.08248includedK562FXR1
    SEMLXIPENSG00000175727.9chr12+1226168381226169301226153901226154801226178941226185340.091000.001180.04497includedK562FXR1
    SEPDCD10ENSG00000114209.10chr3-1674431881674432611674378491674380611674522191674523050.197000.000440.02073includedK562FXR1
    SETRIM59ENSG00000213186.3chr3-1601665131601665831601566361601569741601675041601676170.556000.000000.00000includedK562FXR1
    SECHEK1ENSG00000149554.8chr11+1255073431255074391255053231255054281255136861255138020.251000.000000.00000includedK562FXR1
    SESCMH1ENSG00000010803.12chr1-4150698241507237415030334150321341512089415122700.644000.000890.03593includedK562FXR1
    SERAB1AENSG00000138069.12chr2-6531607265316204653150046531582465325104653252000.159000.000000.00000includedK562FXR1
    SEAGPAT3ENSG00000160216.14chr21+4538051245380660453796694537974045387826453879580.120000.000060.00441includedK562FXR1
    SESEC31AENSG00000138674.12chr4-8378368683783725837788418377891783784470837845450.055000.002750.08363includedK562FXR1
    SERHOT1ENSG00000126858.12chr17+3049995530500079304980613049812030500849305009310.107000.000000.00016includedK562FXR1
    SECENPNENSG00000166451.9chr16+8105620181056303810537048105388181058319810583830.227000.000400.01903includedK562FXR1
    SEHSPA14ENSG00000187522.9chr10+1489321714893322148917191489181014894368148945300.134000.000020.00199includedK562FXR1
    SEGPBP1L1ENSG00000159592.6chr1-4615124746151292461262204612689746152083461523250.135000.002270.07337includedK562FXR1
    SEBAG6ENSG00000204463.8chr6-3161208331612191316118583161197131612301316123790.140000.000040.00313includedK562FXR1
    SENOL11ENSG00000130935.5chr17+6573318665733261657327816573287065733623657338080.077000.000000.00000includedK562FXR1
    SEPICALMENSG00000073921.13chr11-8568911285689136856876658568772585692171856922710.085000.000510.02281includedK562FXR1
    SEMYNNENSG00000085274.11chr3+1694918181694918851694912141694912501694920521694923490.140000.002520.07906includedK562FXR1
    SESMC6ENSG00000163029.11chr2-1793424417934331179270931792721817934892179350400.234000.000340.01686includedK562FXR1
    SETOP3BENSG00000100038.15chr22-2233035222330559223300112233017922337126223371840.135000.000000.00000includedK562FXR1
    SESCAF4ENSG00000156304.10chr21-3307330733073484330688813306906333074088330742310.108000.000000.00018includedK562FXR1
    SEAP000320.7ENSG00000272657.1chr21+3547513335475211354458913544604535497640354977800.056000.000060.00384includedK562FXR1
    SEACIN1ENSG00000100813.10chr14-2354033323540395235386842353882623540635235407470.256000.000490.02239includedK562FXR1
    SESMC5ENSG00000198887.7chr9+7296152072961565729590597295918572961981729620770.294000.000040.00286includedK562FXR1
    SECA8ENSG00000178538.5chr8-6113486661134916611206296112147861135207611353200.072000.001390.05100includedK562FXR1
    SEEGFL7ENSG00000172889.11chr9+1395646201395647821395643651395644611395654011395654410.098000.001740.06040includedK562FXR1
    SEUBE2BENSG00000119048.3chr5+1337240151337241041337100731337101541337259151337276830.055000.000320.01569includedK562FXR1
    SEOGTENSG00000147162.9chrX+7076441670764485707576787075792270767756707678730.124000.001810.06204includedK562FXR1





    34 RBPs can affect the splicing of FXR1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.229000.000000.00000includedK562SRSF1
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693909180694367-0.150000.000020.00076excludedK562SF3B4
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.143000.000020.00285includedHepG2RBM22
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693909180694367-0.150000.000000.00000excludedHepG2U2AF1
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693909180694367-0.133000.000000.00000excludedHepG2U2AF2
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.090000.000760.04712includedHepG2AKAP1
    SEFXR1ENSG00000114416.13chr3+1806510681806511741806304651806305241806656521806657240.608000.000340.00491includedK562AQR
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693892180694070-0.085000.000010.00019excludedK562AQR
    SEFXR1ENSG00000114416.13chr3+180671549180671628180669085180669256180675606180675716-0.068000.000000.00000excludedK562AQR
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.111000.000440.04442includedHepG2SRSF7
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.152000.000080.01115includedK562SUPV3L1
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693909180694070-0.113000.000130.00304excludedK562PUS1
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693909180694367-0.151000.000060.01856excludedK562MTPAP
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.121000.000460.02571includedHepG2SFPQ
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693909180694367-0.159000.000000.00010excludedK562U2AF1
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.087000.001270.07922includedHepG2HNRNPL
    SEFXR1ENSG00000114416.13chr3+180652925180653019180630458180630524180665652180665724-0.053000.000290.04314excludedK562RBM22
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693909180694367-0.194000.000000.00000excludedK562U2AF2
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091807005410.105000.003210.09013includedK562TARDBP
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.388000.000000.00000includedHepG2HNRNPC
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806941660.135000.000280.02382includedHepG2SRSF9
    SEFXR1ENSG00000114416.13chr3+180693100180693192180687945180688146180693909180694367-0.142000.000020.04098excludedK562PABPC4
    SEFXR1ENSG00000114416.13chr3+1806931001806931921806879451806881461806939091806943670.402000.000000.00000includedK562HNRNPC
    A3SSFXR1ENSG00000114416.13chr3+1806879451806881461806880391806881461806858381806860420.104000.000070.03423longerHepG2HNRNPUL1
    A3SSFXR1ENSG00000114416.13chr3+1806879451806881461806880391806881461806858381806860420.104000.000120.00437longerHepG2U2AF2
    A3SSFXR1ENSG00000114416.13chr3+1806938921806940701806939091806940701806931001806931920.096000.000000.00000longerK562AQR
    RIFXR1ENSG00000114416.13chr3+180680670180680878180680670180680728180680815180680878-0.107000.001160.07083excludedHepG2DDX6
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.101000.000300.00249includedK562PUS1
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.150000.000040.00095includedHepG2SF3A3
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.122000.001210.07419includedHepG2DDX3X
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.154000.010170.06138includedHepG2U2AF2
    RIFXR1ENSG00000114416.13chr3+180680670180680878180680670180680728180680815180680878-0.098000.003080.08038excludedHepG2TIA1
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.243000.000010.00034includedHepG2PRPF8
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.132000.004720.05189includedK562PRPF8
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.243000.000000.00001includedHepG2HNRNPA1
    RIFXR1ENSG00000114416.13chr3+180680670180680878180680670180680728180680815180680878-0.116000.001810.06629excludedK562SUPV3L1
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.204000.000000.00001includedK562U2AF2
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.162000.000230.01523includedHepG2HNRNPC
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.288000.000000.00000includedHepG2TIAL1
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.199000.000000.00007includedHepG2NCBP2
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.136000.000270.02205includedHepG2HNRNPU
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.081000.010130.07678includedHepG2RBM22
    RIFXR1ENSG00000114416.13chr3+180680670180680878180680670180680728180680815180680878-0.149000.000000.00006excludedHepG2HNRNPK
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.187000.000000.00000includedK562AQR
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.114000.000600.02539includedK562TARDBP
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.164000.000000.00078includedHepG2SSB
    RIFXR1ENSG00000114416.13chr3+1806806701806808781806806701806807281806808151806808780.178000.000000.00004includedK562PTBP1
    MXEFXR1ENSG00000114416.13chr3+1806511211806511741806529251806530191806304581806305241806656521806657240.123000.000570.020911includedK562UCHL5
    MXEFXR1ENSG00000114416.13chr3+1806690851806692561806715491806716281806670141806671311806756061806757160.112000.000000.000001includedK562DROSHA
    MXEFXR1ENSG00000114416.13chr3+1806511211806511741806529251806530191806304581806305241806656521806657240.099000.005020.055071includedK562DROSHA
    MXEFXR1ENSG00000114416.13chr3+1806511211806511741806529251806530191806304581806305241806656521806657240.150000.000050.003111includedK562XRN2
    MXEFXR1ENSG00000114416.13chr3+1806690851806692561806715491806716281806670141806671311806756061806757160.112000.000160.001781includedK562AQR
    MXEFXR1ENSG00000114416.13chr3+1806880541806881461806931001806931921806858381806860421806939091806949430.170000.000070.042441includedK562MTPAP
    MXEFXR1ENSG00000114416.13chr3+1806879451806881461806931001806931921806858381806860421806939091806949430.110000.000140.050971includedK562MTPAP
    MXEFXR1ENSG00000114416.13chr3+180687945180688146180693100180693192180685838180686042180693909180694943-0.276000.000000.000002includedK562HNRNPC
    MXEFXR1ENSG00000114416.13chr3+180651121180651174180652925180653019180630458180630524180665652180665724-0.112000.003630.083182includedHepG2HNRNPU
    MXEFXR1ENSG00000114416.13chr3+1806511211806511741806529251806530191806304581806305241806656521806657240.150000.000030.001461includedK562SUPV3L1
    MXEFXR1ENSG00000114416.13chr3+180687945180688146180693100180693192180685838180686042180693909180694943-0.104000.000040.001822includedK562SUPV3L1
    MXEFXR1ENSG00000114416.13chr3+1806511211806511741806529251806530191806304581806305241806656521806657240.118000.001300.073531includedK562SERBP1

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    No autoregularoty alternative splicing events between protein FXR1 and its RNA.