CHD4

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CHD4	ENSG00000111642.15	157.65	172.88	165.26	ENCSR000AEF
HepG2	CHD4	ENSG00000111642.15	131.18	122.53	126.86	ENCSR985KAT
K562	CHD4	ENSG00000111642.15	249.70	252.27	250.99	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CHD4 is not avaliable on ENCORE database.

Proteins bound to RNA

CHD4 RNA is bound by 64 proteins.

eCLIP assay for CHD4 is not avaliable on ENCORE database.

64 proteins are bound to CHD4 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	6679575	6679654	-	3'-UTR,intron-Distal	5.32004	9.46220	HepG2	UPF1
chr12	6679727	6679797	-	3'-UTR,intron-Distal	5.26903	10.05440	HepG2	UPF1
chr12	6679400	6679495	-	3'-UTR,intron-Distal,intron-Proximal	4.61664	24.00823	HepG2	UPF1
chr12	6679654	6679727	-	3'-UTR,intron-Distal	5.52142	10.64766	HepG2	UPF1
chr12	6679406	6679507	-	3'-UTR,intron-Distal,intron-Proximal	4.49253	8.22782	HepG2	TIAL1
chr12	6679349	6679401	-	3'-UTR,intron-Distal	4.35019	4.86325	K562	DDX6
chr12	6679395	6679466	-	3'-UTR,intron-Distal,intron-Proximal	5.49604	48.58966	HepG2	SUB1
chr12	6679406	6679462	-	3'-UTR,intron-Distal,intron-Proximal	3.00201	6.68298	K562	APOBEC3C
chr12	6679412	6679479	-	3'-UTR,intron-Distal,intron-Proximal	4.15714	19.32540	HepG2	DDX55
chr12	6679351	6679393	-	3'-UTR,intron-Distal	3.87032	12.91015	K562	PABPC4
chr12	6679779	6679809	-	3'-UTR,intron-Distal	3.40019	12.62725	K562	YBX3
chr12	6679559	6679653	-	3'-UTR,intron-Distal	4.05357	13.03891	K562	UPF1
chr12	6679396	6679463	-	3'-UTR,intron-Distal,intron-Proximal	5.28250	8.15576	HepG2	TIA1
chr12	6679348	6679394	-	3'-UTR,intron-Distal	4.48672	20.07258	K562	UPF1
chr12	6679413	6679486	-	3'-UTR,intron-Distal,intron-Proximal	3.64261	6.90818	HepG2	AKAP1
chr12	6679653	6679710	-	3'-UTR,intron-Distal	3.10983	5.99166	K562	UPF1
chr12	6679469	6679503	-	3'-UTR,intron-Distal,intron-Proximal	4.91992	6.88705	HepG2	SUB1
chr12	6679406	6679463	-	3'-UTR,intron-Distal,intron-Proximal	4.43259	400.00000	K562	PABPC4
chr12	6679725	6679811	-	3'-UTR,intron-Distal	4.52633	5.20569	HepG2	PCBP1
chr12	6679405	6679464	-	3'-UTR,intron-Distal,intron-Proximal	3.16921	8.55098	HepG2	LSM11
chr12	6679763	6679804	-	3'-UTR,intron-Distal	3.21178	6.23062	HepG2	SUB1
chr12	6679730	6679793	-	3'-UTR,intron-Distal	3.20432	4.01831	HepG2	AKAP1
chr12	6679394	6679464	-	3'-UTR,intron-Distal,intron-Proximal	3.24408	43.01534	K562	UPF1
chr12	6679276	6679322	-	3'-UTR,intron-Distal	4.74479	15.36764	K562	PABPC4
chr12	6715547	6715605	-	5'-UTR,intron-Distal	4.78682	25.79929	K562	FXR2
chr12	6716466	6716481	-	5'-UTR,intron-Distal	4.73362	11.36386	K562	FMR1
chr12	6715493	6715559	-	5'-UTR,CDS,intron-Distal	3.07955	18.54130	K562	FMR1
chr12	6715610	6715684	-	5'-UTR,intron-Distal,intron-Proximal	3.68819	8.97091	HepG2	PRPF4
chr12	6715489	6715547	-	5'-UTR,CDS,intron-Distal	4.40063	24.11330	K562	FXR2
chr12	6715559	6715611	-	5'-UTR,intron-Distal	5.64262	22.99621	K562	FMR1
chr12	6716426	6716486	-	5'-UTR,intron-Distal	3.14736	6.29405	HepG2	PRPF8
chr12	6715564	6715610	-	5'-UTR,intron-Distal	3.70941	9.55915	HepG2	GRWD1
chr12	6716492	6716536	-	5'-UTR,intron-Distal,intron-Proximal	5.13940	39.18281	K562	FXR2
chr12	6716484	6716501	-	5'-UTR,intron-Distal	3.77066	6.65702	HepG2	NCBP2
chr12	6715484	6715551	-	5'-UTR,CDS,intron-Distal	3.71264	16.10838	HepG2	DDX3X
chr12	6715566	6715608	-	5'-UTR,intron-Distal	3.32505	4.75010	HepG2	EIF3D
chr12	6715604	6715652	-	5'-UTR,intron-Distal,intron-Proximal	3.30045	6.02419	K562	AQR
chr12	6715547	6715602	-	5'-UTR,intron-Distal	3.12704	10.48121	K562	DDX3X
chr12	6715602	6715687	-	5'-UTR,intron-Distal,intron-Proximal	4.56049	18.73781	K562	SF3B4
chr12	6716495	6716545	-	5'-UTR,intron-Distal,intron-Proximal	4.97827	15.37463	HepG2	GRWD1
chr12	6716464	6716484	-	5'-UTR,intron-Distal	3.37927	5.64139	HepG2	NCBP2
chr12	6716481	6716502	-	5'-UTR,intron-Distal	4.51457	13.80436	K562	FMR1
chr12	6715837	6715924	-	5'-UTR,intron-Distal,intron-Proximal	4.97096	7.46068	HepG2	HNRNPK
chr12	6716508	6716551	-	5'-UTR,intron-Distal,intron-Proximal	3.23624	6.54127	K562	DDX3X
chr12	6716536	6716550	-	5'-UTR,intron-Distal,intron-Proximal	5.44831	29.00848	K562	FXR2
chr12	6716506	6716533	-	5'-UTR,intron-Distal	4.75727	22.48757	K562	FMR1
chr12	6716464	6716508	-	5'-UTR,intron-Distal	3.28392	7.94458	K562	DDX3X
chr12	6716501	6716550	-	5'-UTR,intron-Distal,intron-Proximal	3.22540	10.31934	HepG2	NCBP2
chr12	6715571	6715580	-	5'-UTR,intron-Distal	4.85398	10.38007	K562	UCHL5
chr12	6716475	6716495	-	5'-UTR,intron-Distal	5.25909	9.24396	HepG2	GRWD1
chr12	6716511	6716527	-	5'-UTR,intron-Distal	3.58110	5.53232	K562	PUM1
chr12	6715816	6715894	-	5'-UTR,intron-Distal,intron-Proximal	3.07987	3.19579	K562	HNRNPK
chr12	6716465	6716485	-	5'-UTR,intron-Distal	5.47335	20.87370	K562	FXR2
chr12	6715602	6715618	-	5'-UTR,intron-Distal,intron-Proximal	3.51363	7.73893	K562	DDX3X
chr12	6715571	6715670	-	5'-UTR,intron-Distal,intron-Proximal	4.72370	11.58626	K562	SMNDC1
chr12	6716508	6716548	-	5'-UTR,intron-Distal,intron-Proximal	4.74195	5.43138	K562	FXR1
chr12	6716533	6716550	-	5'-UTR,intron-Distal,intron-Proximal	5.30641	16.91328	K562	FMR1
chr12	6715605	6715620	-	5'-UTR,intron-Distal,intron-Proximal	4.27962	4.36077	HepG2	NCBP2
chr12	6690243	6690294	-	CDS,intron-Distal	4.75806	21.96565	K562	UCHL5
chr12	6691819	6691857	-	CDS,intron-Distal	3.53612	8.84079	K562	FMR1
chr12	6687252	6687277	-	CDS,intron-Distal	4.59550	9.89724	K562	FXR2
chr12	6705171	6705195	-	CDS,intron-Distal,intron-Proximal	5.21424	9.78150	HepG2	G3BP1
chr12	6682314	6682368	-	CDS,intron-Distal	3.75333	13.93110	K562	YBX3
chr12	6691868	6691910	-	CDS,intron-Distal	3.15298	3.55107	K562	FXR1
chr12	6701559	6701585	-	CDS,intron-Distal	4.35690	10.68105	HepG2	BCLAF1
chr12	6687592	6687713	-	CDS,intron-Distal,intron-Proximal	3.19162	3.54212	HepG2	RBM5
chr12	6702277	6702313	-	CDS,intron-Distal	4.27091	9.58229	K562	FXR2
chr12	6690260	6690270	-	CDS,intron-Distal	4.15321	11.06379	K562	ZNF622
chr12	6707458	6707502	-	CDS,intron-Distal	3.51066	5.21615	K562	SLTM
chr12	6687194	6687200	-	CDS,intron-Distal,intron-Proximal	3.01920	3.07411	K562	LIN28B
chr12	6711572	6711606	-	CDS,intron-Distal	3.61736	12.81576	K562	ZNF622
chr12	6692372	6692384	-	CDS,intron-Distal,intron-Proximal	4.31567	11.69530	K562	FXR2
chr12	6691820	6691854	-	CDS,intron-Distal	4.80302	11.53453	K562	FXR2
chr12	6696560	6696586	-	CDS,intron-Distal	4.04579	4.88762	K562	FXR1
chr12	6711134	6711197	-	CDS,intron-Distal,intron-Proximal	3.30414	4.89603	K562	TRA2A
chr12	6697566	6697588	-	CDS,intron-Distal	4.34311	9.58229	K562	FXR2
chr12	6701568	6701588	-	CDS,intron-Distal	5.12318	13.84664	K562	FXR2
chr12	6687677	6687718	-	CDS,intron-Distal,intron-Proximal	3.32239	9.79879	HepG2	AQR
chr12	6710675	6710696	-	CDS,intron-Distal	3.08494	6.09968	K562	PUM1
chr12	6690456	6690482	-	CDS,intron-Distal,intron-Proximal	4.08835	8.48693	HepG2	FXR2
chr12	6690321	6690338	-	CDS,intron-Distal,intron-Proximal	4.68536	8.42950	HepG2	FXR2
chr12	6691800	6691867	-	CDS,intron-Distal	3.94953	8.28827	K562	FXR1
chr12	6707013	6707067	-	CDS,intron-Distal,intron-Proximal	5.29784	7.36776	HepG2	PRPF8
chr12	6710828	6710868	-	CDS,intron-Distal	3.27788	11.84454	K562	UCHL5
chr12	6687194	6687242	-	CDS,intron-Distal,intron-Proximal	4.58098	22.28560	HepG2	BCLAF1
chr12	6687635	6687677	-	CDS,intron-Distal	4.14891	13.49046	HepG2	FXR2
chr12	6710860	6710932	-	CDS,intron-Distal	3.04908	16.38689	K562	GRWD1
chr12	6690306	6690338	-	CDS,intron-Distal,intron-Proximal	3.89893	11.62655	K562	FXR2
chr12	6707181	6707216	-	CDS,intron-Distal	3.86304	3.18004	K562	FXR1
chr12	6709395	6709435	-	CDS,intron-Distal	4.81567	19.73550	K562	FXR2
chr12	6709731	6709769	-	CDS,intron-Distal	3.04369	5.78797	K562	GRWD1
chr12	6709737	6709784	-	CDS,intron-Distal	4.58887	6.18884	K562	FXR1
chr12	6701625	6701649	-	CDS,intron-Distal,intron-Proximal	5.08313	9.57152	K562	FXR2
chr12	6687242	6687300	-	CDS,intron-Distal	5.90355	54.02697	HepG2	BCLAF1
chr12	6687677	6687713	-	CDS,intron-Distal,intron-Proximal	5.22213	9.19288	K562	TRA2A
chr12	6692504	6692544	-	CDS,intron-Distal,intron-Proximal	3.02429	5.88289	K562	HLTF
chr12	6696634	6696721	-	CDS,intron-Distal	3.91787	11.62654	HepG2	GRWD1
chr12	6701528	6701566	-	CDS,intron-Distal,intron-Proximal	4.78899	5.27173	HepG2	PRPF8
chr12	6692432	6692498	-	CDS,intron-Distal	5.22992	15.84569	HepG2	GRWD1
chr12	6687530	6687577	-	CDS,intron-Distal,intron-Proximal	5.03551	22.50854	HepG2	PRPF8
chr12	6702664	6702684	-	CDS,intron-Distal	6.37993	15.66673	K562	FXR2
chr12	6688012	6688045	-	CDS,intron-Distal,intron-Proximal	4.25473	17.36290	K562	ZNF622
chr12	6690314	6690339	-	CDS,intron-Distal,intron-Proximal	3.19269	9.94885	HepG2	BUD13
chr12	6690315	6690339	-	CDS,intron-Distal,intron-Proximal	4.89577	11.49169	HepG2	GRWD1
chr12	6705171	6705184	-	CDS,intron-Distal,intron-Proximal	4.23925	5.05122	K562	DDX24
chr12	6687248	6687302	-	CDS,intron-Distal	4.34295	14.52104	HepG2	G3BP1
chr12	6687703	6687712	-	CDS,intron-Distal	5.06295	19.91879	K562	UCHL5
chr12	6687630	6687676	-	CDS,intron-Distal	5.88347	26.69673	HepG2	BCLAF1
chr12	6711573	6711640	-	CDS,intron-Distal	3.91232	19.66605	K562	GRWD1
chr12	6696532	6696573	-	CDS,intron-Distal,intron-Proximal	4.14126	6.23016	HepG2	PRPF8
chr12	6696957	6697001	-	CDS,intron-Distal,intron-Proximal	4.85893	6.54425	K562	LIN28B
chr12	6711584	6711611	-	CDS,intron-Distal	3.77101	3.05512	HepG2	PRPF4
chr12	6700880	6700964	-	CDS,intron-Distal,intron-Proximal	5.69566	12.55096	K562	LIN28B
chr12	6697508	6697562	-	CDS,intron-Distal	3.46943	11.45027	K562	FMR1
chr12	6709727	6709764	-	CDS,intron-Distal	4.32142	9.37200	HepG2	G3BP1
chr12	6687678	6687713	-	CDS,intron-Distal,intron-Proximal	3.14321	9.16125	K562	CPSF6
chr12	6704550	6704596	-	CDS,intron-Distal	4.82306	12.55080	HepG2	G3BP1
chr12	6711618	6711641	-	CDS,intron-Distal	3.52686	9.22245	HepG2	GRWD1
chr12	6692421	6692501	-	CDS,intron-Distal	4.86653	26.35963	K562	GRWD1
chr12	6687288	6687303	-	CDS,intron-Distal	4.32810	16.22306	K562	PUM1
chr12	6692426	6692508	-	CDS,intron-Distal	3.37282	13.18152	HepG2	G3BP1
chr12	6692363	6692372	-	CDS,intron-Distal,intron-Proximal	4.40618	13.19831	K562	FXR2
chr12	6690304	6690339	-	CDS,intron-Distal,intron-Proximal	4.81936	26.05947	HepG2	BCLAF1
chr12	6709469	6709513	-	CDS,intron-Distal	3.01679	3.09727	K562	YWHAG
chr12	6707399	6707418	-	CDS,intron-Distal	5.22466	8.07480	K562	FMR1
chr12	6687233	6687288	-	CDS,intron-Distal	3.53455	18.31292	K562	PUM1
chr12	6696649	6696658	-	CDS,intron-Distal	3.89404	7.91838	K562	GRWD1
chr12	6709090	6709129	-	CDS,intron-Distal	4.23863	10.40919	K562	FMR1
chr12	6690209	6690212	-	CDS,intron-Distal,intron-Proximal	5.28522	18.80297	K562	UCHL5
chr12	6692364	6692381	-	CDS,intron-Distal,intron-Proximal	3.31460	6.20820	K562	FMR1
chr12	6710191	6710239	-	CDS,intron-Distal,intron-Proximal	3.97179	7.53394	K562	AQR
chr12	6711328	6711383	-	CDS,intron-Distal,intron-Proximal	3.44632	3.44979	HepG2	PRPF8
chr12	6711606	6711662	-	CDS,intron-Distal,intron-Proximal	3.65154	19.70602	K562	ZNF622
chr12	6696998	6697094	-	CDS,intron-Distal,intron-Proximal	3.28540	6.48709	K562	SLTM
chr12	6696876	6696907	-	CDS,intron-Distal,intron-Proximal	3.12998	4.83165	HepG2	G3BP1
chr12	6696956	6697008	-	CDS,intron-Distal,intron-Proximal	4.46137	3.43975	HepG2	LIN28B
chr12	6692365	6692373	-	CDS,intron-Distal,intron-Proximal	3.61823	3.23276	K562	FXR1
chr12	6687669	6687717	-	CDS,intron-Distal,intron-Proximal	3.36059	9.19851	K562	AQR
chr12	6702635	6702664	-	CDS,intron-Distal	5.20206	14.17850	K562	FXR2
chr12	6687641	6687688	-	CDS,intron-Distal	5.35054	27.40550	K562	ZNF622
chr12	6687197	6687233	-	CDS,intron-Distal	3.97440	10.58522	K562	PUM1
chr12	6701141	6701175	-	CDS,intron-Distal	4.63408	8.19380	K562	FMR1
chr12	6687252	6687316	-	CDS,intron-Distal,intron-Proximal	3.49863	7.68851	HepG2	AQR
chr12	6704566	6704595	-	CDS,intron-Distal	4.22304	14.24397	HepG2	BCLAF1
chr12	6690316	6690339	-	CDS,intron-Distal,intron-Proximal	3.81943	13.36200	K562	ZNF622
chr12	6710819	6710873	-	CDS,intron-Distal	4.68643	16.51655	HepG2	GRWD1
chr12	6711133	6711146	-	CDS,intron-Distal,intron-Proximal	3.92128	3.85588	HepG2	ZNF800
chr12	6701558	6701568	-	CDS,intron-Distal,intron-Proximal	5.91180	13.62556	K562	FXR2
chr12	6687265	6687303	-	CDS,intron-Distal	3.89312	7.75026	HepG2	GRWD1
chr12	6687250	6687304	-	CDS,intron-Distal,intron-Proximal	3.00711	16.06453	K562	ZNF800
chr12	6709728	6709770	-	CDS,intron-Distal	3.09115	10.23896	K562	ZNF622
chr12	6696714	6696725	-	CDS,intron-Distal	3.67501	14.61970	K562	UCHL5
chr12	6696877	6696901	-	CDS,intron-Distal,intron-Proximal	3.31778	13.79656	K562	UCHL5
chr12	6692517	6692541	-	CDS,intron-Distal	3.64985	6.23998	K562	PUM1
chr12	6710901	6710926	-	CDS,intron-Distal	3.05470	6.13998	HepG2	G3BP1
chr12	6711217	6711311	-	CDS,intron-Distal	3.54861	21.39430	K562	ZNF622
chr12	6687574	6687600	-	CDS,intron-Distal,intron-Proximal	6.11001	31.38531	HepG2	BCLAF1
chr12	6703761	6703794	-	CDS,intron-Distal	4.32683	11.39763	K562	FXR2
chr12	6692074	6692110	-	CDS,intron-Distal,intron-Proximal	3.58209	11.64842	HepG2	BUD13
chr12	6692476	6692522	-	CDS,intron-Distal	4.90761	42.86902	K562	UCHL5
chr12	6709520	6709574	-	CDS,intron-Distal,intron-Proximal	3.40019	5.84601	HepG2	PRPF8
chr12	6709080	6709141	-	CDS,intron-Distal	3.03667	8.52066	HepG2	PPIG
chr12	6710474	6710550	-	CDS,intron-Distal	5.11062	21.14203	K562	FMR1
chr12	6711609	6711664	-	CDS,intron-Distal,intron-Proximal	3.01380	5.52660	K562	CPSF6
chr12	6688014	6688050	-	CDS,intron-Distal	3.19725	4.08434	K562	FXR1
chr12	6710552	6710590	-	CDS,intron-Distal	3.32882	3.57643	HepG2	FASTKD2
chr12	6709090	6709122	-	CDS,intron-Distal	6.23361	16.27089	K562	UCHL5
chr12	6696648	6696679	-	CDS,intron-Distal	4.24860	9.10244	HepG2	G3BP1
chr12	6696549	6696569	-	CDS,intron-Distal,intron-Proximal	4.43617	14.49682	K562	FXR2
chr12	6692463	6692497	-	CDS,intron-Distal	4.30482	6.16837	K562	AGGF1
chr12	6707102	6707137	-	CDS,intron-Distal	4.15743	8.66431	K562	FXR2
chr12	6690308	6690339	-	CDS,intron-Distal,intron-Proximal	3.21242	7.08636	K562	GRWD1
chr12	6702638	6702678	-	CDS,intron-Distal	6.04543	13.43794	K562	FMR1
chr12	6687223	6687249	-	CDS,intron-Distal	3.35872	11.17259	K562	ZNF622
chr12	6692090	6692098	-	CDS,intron-Distal,intron-Proximal	3.15696	4.29277	HepG2	GRWD1
chr12	6688012	6688030	-	CDS,intron-Distal,intron-Proximal	3.06341	5.98642	K562	DDX24
chr12	6690456	6690461	-	CDS,intron-Distal,intron-Proximal	3.66648	8.80557	K562	GRWD1
chr12	6711139	6711252	-	CDS,intron-Distal,intron-Proximal	5.86900	12.86533	HepG2	TRA2A
chr12	6700631	6700645	-	CDS,intron-Distal,intron-Proximal	3.02586	3.38585	K562	YBX3
chr12	6692272	6692279	-	CDS,intron-Distal,intron-Proximal	5.01293	13.51514	K562	FXR2
chr12	6704550	6704595	-	CDS,intron-Distal	3.44160	6.70600	HepG2	EIF3H
chr12	6692259	6692272	-	CDS,intron-Distal,intron-Proximal	5.98431	14.30518	K562	FXR2
chr12	6707462	6707556	-	CDS,intron-Distal	3.54539	11.77523	HepG2	RPS3
chr12	6709393	6709483	-	CDS,intron-Distal	3.62678	3.90322	HepG2	UCHL5
chr12	6709466	6709500	-	CDS,intron-Distal	4.35588	15.74369	K562	FXR2
chr12	6692027	6692061	-	CDS,intron-Distal	3.46997	4.39623	HepG2	PPIG
chr12	6687232	6687303	-	CDS,intron-Distal	4.06509	26.42318	HepG2	FXR2
chr12	6707074	6707119	-	CDS,intron-Distal	3.27804	5.11645	HepG2	GRWD1
chr12	6692364	6692384	-	CDS,intron-Distal,intron-Proximal	3.13840	6.56233	K562	PUM1
chr12	6710174	6710217	-	CDS,intron-Distal,intron-Proximal	3.40667	8.49794	K562	FXR2
chr12	6691344	6691418	-	CDS,intron-Distal	4.33995	10.59462	HepG2	EIF3H
chr12	6711555	6711634	-	CDS,intron-Distal	4.33891	23.90469	HepG2	BCLAF1
chr12	6701558	6701606	-	CDS,intron-Distal,intron-Proximal	3.65857	6.92621	K562	FXR1
chr12	6692515	6692542	-	CDS,intron-Distal,intron-Proximal	3.36755	5.26861	K562	DDX24
chr12	6692518	6692541	-	CDS,intron-Distal	3.14529	3.95191	K562	METAP2
chr12	6687206	6687220	-	CDS,intron-Distal	4.36842	7.66839	K562	FXR2
chr12	6710172	6710213	-	CDS,intron-Distal	3.85617	10.61740	K562	FMR1
chr12	6710813	6710873	-	CDS,intron-Distal,intron-Proximal	3.34985	21.42736	K562	ZNF622
chr12	6700644	6700673	-	CDS,intron-Distal	4.57443	8.53601	K562	FMR1
chr12	6691364	6691378	-	CDS,intron-Distal	4.25756	12.20614	K562	UCHL5
chr12	6682266	6682366	-	CDS,intron-Distal	3.09740	6.25871	HepG2	PABPN1
chr12	6707169	6707179	-	CDS,intron-Distal	3.08872	5.39072	HepG2	GRWD1
chr12	6709723	6709770	-	CDS,intron-Distal	4.43317	14.23706	HepG2	GRWD1
chr12	6696679	6696725	-	CDS,intron-Distal	3.38778	6.29658	HepG2	G3BP1
chr12	6690308	6690315	-	CDS,intron-Distal	3.64495	5.54854	HepG2	GRWD1
chr12	6710867	6710910	-	CDS,intron-Distal	6.02871	12.60779	K562	FXR2
chr12	6696877	6696897	-	CDS,intron-Distal,intron-Proximal	4.24001	13.72084	HepG2	BCLAF1
chr12	6711125	6711161	-	CDS,intron-Distal,intron-Proximal	3.96539	17.62483	K562	ZNF622
chr12	6687293	6687302	-	CDS,intron-Distal	3.46749	10.40226	K562	UCHL5
chr12	6707087	6707137	-	CDS,intron-Distal	3.43129	3.71990	K562	FXR1
chr12	6704458	6704508	-	CDS,intron-Distal,intron-Proximal	5.82799	11.46503	HepG2	PRPF8
chr12	6702355	6702395	-	CDS,intron-Distal,intron-Proximal	5.16092	8.76192	HepG2	LIN28B
chr12	6687574	6687599	-	CDS,intron-Distal,intron-Proximal	4.60310	7.94477	HepG2	GRWD1
chr12	6702363	6702395	-	CDS,intron-Distal,intron-Proximal	4.83257	5.66624	K562	LIN28B
chr12	6711554	6711625	-	CDS,intron-Distal	4.46145	27.49073	K562	UCHL5
chr12	6690456	6690507	-	CDS,intron-Distal,intron-Proximal	3.17742	4.32061	K562	HLTF
chr12	6692515	6692548	-	CDS,intron-Distal,intron-Proximal	3.94073	4.84106	K562	EIF4G2
chr12	6711560	6711604	-	CDS,intron-Distal	3.60906	3.33003	HepG2	TRA2A
chr12	6702272	6702311	-	CDS,intron-Distal	5.50472	8.72026	HepG2	EIF3H
chr12	6696621	6696685	-	CDS,intron-Distal	3.91409	34.24797	K562	UCHL5
chr12	6687197	6687232	-	CDS,intron-Distal	3.14683	10.04358	HepG2	FXR2
chr12	6707164	6707199	-	CDS,intron-Distal	4.32173	13.60283	K562	UCHL5
chr12	6710815	6710826	-	CDS,intron-Distal	3.17807	10.62277	HepG2	BCLAF1
chr12	6691373	6691416	-	CDS,intron-Distal	4.03919	3.04123	K562	LIN28B
chr12	6696971	6696983	-	CDS,intron-Distal	3.11934	7.43909	HepG2	BCLAF1
chr12	6682307	6682357	-	CDS,intron-Distal	4.48944	11.98752	K562	FXR2
chr12	6702581	6702592	-	CDS,intron-Distal,intron-Proximal	4.60289	5.77684	HepG2	G3BP1
chr12	6710550	6710592	-	CDS,intron-Distal	3.90666	8.23206	K562	FMR1
chr12	6691386	6691418	-	CDS,intron-Distal	3.67976	6.58996	HepG2	GRWD1
chr12	6707173	6707234	-	CDS,intron-Distal,intron-Proximal	3.24462	4.57537	K562	LIN28B
chr12	6686912	6686960	-	CDS,intron-Distal,intron-Proximal	4.38288	13.14214	HepG2	PRPF8
chr12	6687643	6687671	-	CDS,intron-Distal	3.33522	6.60114	HepG2	G3BP1
chr12	6690923	6690955	-	CDS,intron-Distal	3.20949	6.20820	K562	FMR1
chr12	6687643	6687666	-	CDS,intron-Distal	3.72538	7.63569	K562	FXR2
chr12	6711522	6711544	-	CDS,intron-Distal,intron-Proximal	3.87015	13.29422	K562	AQR
chr12	6696685	6696714	-	CDS,intron-Distal	3.59618	22.65695	K562	UCHL5
chr12	6701832	6701886	-	CDS,intron-Distal,intron-Proximal	5.06647	5.01842	HepG2	PRPF8
chr12	6696625	6696674	-	CDS,intron-Distal	4.24859	12.69146	HepG2	FXR2
chr12	6710904	6710925	-	CDS,intron-Distal	4.43377	14.24397	HepG2	BCLAF1
chr12	6688009	6688081	-	CDS,intron-Distal,intron-Proximal	3.25433	12.63641	K562	GPKOW
chr12	6711593	6711618	-	CDS,intron-Distal	3.72880	7.75026	HepG2	GRWD1
chr12	6691368	6691382	-	CDS,intron-Distal	3.07079	3.19187	K562	YWHAG
chr12	6692077	6692144	-	CDS,intron-Distal,intron-Proximal	4.74697	6.49507	K562	EFTUD2
chr12	6690215	6690243	-	CDS,intron-Distal,intron-Proximal	4.08323	13.57683	K562	ZNF622
chr12	6691349	6691413	-	CDS,intron-Distal	5.79711	25.26718	K562	FXR2
chr12	6709731	6709763	-	CDS,intron-Distal	3.15342	4.87371	HepG2	FXR2
chr12	6688072	6688083	-	CDS,intron-Distal	6.43817	21.17374	K562	UCHL5
chr12	6707450	6707481	-	CDS,intron-Distal	3.78373	8.18410	K562	FMR1
chr12	6687071	6687080	-	CDS,intron-Distal	3.85737	6.23998	K562	PUM1
chr12	6690212	6690243	-	CDS,intron-Distal,intron-Proximal	4.63794	24.13235	K562	UCHL5
chr12	6710873	6710927	-	CDS,intron-Distal	4.56506	17.90644	HepG2	GRWD1
chr12	6715439	6715469	-	CDS,intron-Distal,intron-Proximal	3.87001	7.52895	K562	PUM1
chr12	6715372	6715450	-	CDS,intron-Distal,intron-Proximal	3.84659	10.32093	HepG2	PRPF8
chr12	6710549	6710607	-	CDS,intron-Distal	4.19900	14.15243	HepG2	GRWD1
chr12	6702586	6702605	-	CDS,intron-Distal	3.65042	7.55682	HepG2	BUD13
chr12	6690209	6690225	-	CDS,intron-Distal,intron-Proximal	3.99055	3.60449	K562	YWHAG
chr12	6690304	6690338	-	CDS,intron-Distal,intron-Proximal	4.38780	8.39949	K562	FMR1
chr12	6702281	6702308	-	CDS,intron-Distal	3.78220	12.30450	HepG2	GRWD1
chr12	6701862	6701880	-	CDS,intron-Distal	4.59550	9.89724	K562	FXR2
chr12	6697029	6697038	-	CDS,intron-Distal,intron-Proximal	3.86937	7.06377	K562	YBX3
chr12	6711126	6711146	-	CDS,intron-Distal,intron-Proximal	5.02542	20.64953	K562	UCHL5
chr12	6702634	6702721	-	CDS,intron-Distal	5.37680	13.93856	K562	FXR1
chr12	6687575	6687589	-	CDS,intron-Distal	3.31204	4.49055	K562	YBX3
chr12	6705221	6705263	-	CDS,intron-Distal	3.21062	8.77343	K562	YBX3
chr12	6696564	6696568	-	CDS,intron-Distal	5.91760	9.91399	K562	UCHL5
chr12	6710555	6710601	-	CDS,intron-Distal	4.39431	3.76642	HepG2	UCHL5
chr12	6690322	6690333	-	CDS,intron-Distal	3.74542	4.86632	HepG2	G3BP1
chr12	6711252	6711312	-	CDS,intron-Distal	3.28588	4.79636	HepG2	TRA2A
chr12	6692268	6692276	-	CDS,intron-Distal,intron-Proximal	3.34357	3.34034	HepG2	HLTF
chr12	6691343	6691419	-	CDS,intron-Distal	3.47571	3.40025	HepG2	UCHL5
chr12	6710908	6710932	-	CDS,intron-Distal	4.16602	7.66722	HepG2	FXR2
chr12	6710816	6710854	-	CDS,intron-Distal	3.66508	7.89700	K562	MTPAP
chr12	6709746	6709757	-	CDS,intron-Distal	3.92493	5.49678	K562	FMR1
chr12	6687677	6687707	-	CDS,intron-Distal	4.26390	17.51155	HepG2	FXR2
chr12	6690455	6690500	-	CDS,intron-Distal,intron-Proximal	3.01577	10.81350	K562	ZNF800
chr12	6705171	6705190	-	CDS,intron-Distal,intron-Proximal	3.94951	4.10591	HepG2	EIF3H
chr12	6690917	6690962	-	CDS,intron-Distal	3.37960	3.28107	HepG2	PABPN1
chr12	6690301	6690356	-	CDS,intron-Distal,intron-Proximal	3.01661	3.75327	HepG2	U2AF2
chr12	6691897	6691987	-	CDS,intron-Distal,intron-Proximal	4.22888	13.70545	K562	EFTUD2
chr12	6704508	6704533	-	CDS,intron-Distal	3.29167	4.96885	HepG2	G3BP1
chr12	6696546	6696604	-	CDS,intron-Distal,intron-Proximal	5.84857	44.54260	K562	LIN28B
chr12	6709724	6709760	-	CDS,intron-Distal	3.27405	4.78418	HepG2	EIF3H
chr12	6691373	6691417	-	CDS,intron-Distal	3.77979	6.13396	HepG2	EIF3D
chr12	6701083	6701134	-	CDS,intron-Distal,intron-Proximal	4.03084	5.12645	HepG2	CDC40
chr12	6701083	6701112	-	CDS,intron-Distal,intron-Proximal	3.28809	7.20311	HepG2	PPIG
chr12	6697023	6697061	-	CDS,intron-Distal,intron-Proximal	3.37473	4.45081	HepG2	ZNF800
chr12	6709732	6709760	-	CDS,intron-Distal	4.18055	7.65069	K562	MTPAP
chr12	6692522	6692544	-	CDS,intron-Distal,intron-Proximal	5.27065	20.28401	K562	UCHL5
chr12	6692282	6692323	-	CDS,intron-Distal,intron-Proximal	4.79891	4.90235	K562	SF3B4
chr12	6701148	6701190	-	CDS,intron-Distal	3.25641	4.26316	K562	FXR1
chr12	6711203	6711293	-	CDS,intron-Distal	3.75852	9.55603	K562	CPSF6
chr12	6707391	6707414	-	CDS,intron-Distal	4.26763	4.70436	K562	RBM15
chr12	6707164	6707223	-	CDS,intron-Distal	4.51299	4.31023	HepG2	LIN28B
chr12	6687270	6687298	-	CDS,intron-Distal	3.12489	4.26316	K562	FXR1
chr12	6697024	6697057	-	CDS,intron-Distal,intron-Proximal	3.29758	12.80369	HepG2	BCLAF1
chr12	6691303	6691311	-	CDS,intron-Distal,intron-Proximal	3.34774	5.59104	K562	BUD13
chr12	6697019	6697057	-	CDS,intron-Distal,intron-Proximal	3.54695	6.81934	HepG2	GRWD1
chr12	6703678	6703733	-	CDS,intron-Distal	5.15088	20.08715	K562	FMR1
chr12	6696696	6696723	-	CDS,intron-Distal	3.26473	7.95226	K562	FXR2
chr12	6691363	6691423	-	CDS,intron-Distal	3.55157	4.27313	HepG2	PABPN1
chr12	6711646	6711662	-	CDS,intron-Distal,intron-Proximal	3.44590	8.11148	HepG2	GRWD1
chr12	6707065	6707089	-	CDS,intron-Distal	3.82244	13.36544	HepG2	BCLAF1
chr12	6707096	6707133	-	CDS,intron-Distal	4.63408	8.19380	K562	FMR1
chr12	6707153	6707198	-	CDS,intron-Distal	4.54755	10.83378	HepG2	G3BP1
chr12	6692501	6692519	-	CDS,intron-Distal	4.38311	10.39839	K562	GRWD1
chr12	6709443	6709512	-	CDS,intron-Distal	3.28019	9.61064	HepG2	G3BP1
chr12	6696604	6696622	-	CDS,intron-Distal	3.21277	3.71253	K562	LIN28B
chr12	6682303	6682325	-	CDS,intron-Distal	4.08102	4.56106	HepG2	EIF3H
chr12	6687574	6687594	-	CDS,intron-Distal,intron-Proximal	3.70602	8.01794	HepG2	HLTF
chr12	6688011	6688079	-	CDS,intron-Distal,intron-Proximal	4.14998	11.30148	HepG2	TRA2A
chr12	6697562	6697588	-	CDS,intron-Distal	3.91465	5.96427	K562	FMR1
chr12	6687300	6687303	-	CDS,intron-Distal	6.01860	30.34265	HepG2	BCLAF1
chr12	6687574	6687594	-	CDS,intron-Distal,intron-Proximal	4.16668	15.17442	K562	UCHL5
chr12	6688011	6688072	-	CDS,intron-Distal,intron-Proximal	5.60036	44.62404	K562	UCHL5
chr12	6702266	6702324	-	CDS,intron-Distal	4.78945	8.64490	K562	FXR1
chr12	6709026	6709062	-	CDS,intron-Distal	5.04731	14.84324	K562	FXR2
chr12	6701558	6701589	-	CDS,intron-Distal,intron-Proximal	4.42347	11.08617	K562	FMR1
chr12	6696633	6696671	-	CDS,intron-Distal	4.82496	6.24559	HepG2	ZNF800
chr12	6687574	6687587	-	CDS,intron-Distal,intron-Proximal	3.94390	11.49379	HepG2	FXR2
chr12	6696551	6696562	-	CDS,intron-Distal	3.48822	6.23402	HepG2	FXR2
chr12	6701624	6701666	-	CDS,intron-Distal,intron-Proximal	5.37793	16.22287	K562	FMR1
chr12	6687619	6687677	-	CDS,intron-Distal	4.25335	6.37542	K562	TRA2A
chr12	6696632	6696689	-	CDS,intron-Distal	3.77025	20.80582	K562	ZNF622
chr12	6703692	6703731	-	CDS,intron-Distal	5.39498	18.51972	K562	FXR2
chr12	6687214	6687240	-	CDS,intron-Distal	3.80346	3.92527	K562	FXR1
chr12	6711279	6711312	-	CDS,intron-Distal	3.43956	10.56098	K562	GRWD1
chr12	6697532	6697566	-	CDS,intron-Distal	4.70506	15.47532	K562	FXR2
chr12	6690304	6690317	-	CDS,intron-Distal	4.41774	14.30541	K562	UCHL5
chr12	6692259	6692279	-	CDS,intron-Distal,intron-Proximal	3.53425	6.77101	K562	FMR1
chr12	6702285	6702302	-	CDS,intron-Distal	4.02358	3.15006	K562	RBM15
chr12	6696627	6696671	-	CDS,intron-Distal	4.21302	6.85118	K562	FMR1
chr12	6692430	6692519	-	CDS,intron-Distal	4.82697	37.49719	HepG2	BCLAF1
chr12	6696880	6696883	-	CDS,intron-Distal	3.22389	4.91547	HepG2	GRWD1
chr12	6687059	6687083	-	CDS,intron-Distal	3.24509	10.14475	K562	YBX3
chr12	6696546	6696601	-	CDS,intron-Distal,intron-Proximal	4.60990	12.22608	HepG2	LIN28B
chr12	6701646	6701696	-	CDS,intron-Distal,intron-Proximal	4.35190	5.62048	K562	FXR1
chr12	6702275	6702299	-	CDS,intron-Distal	3.41064	6.13978	HepG2	PPIG
chr12	6692521	6692544	-	CDS,intron-Distal,intron-Proximal	4.26911	15.08342	K562	FXR2
chr12	6697038	6697067	-	CDS,intron-Distal,intron-Proximal	3.13115	7.86167	K562	YBX3
chr12	6707063	6707117	-	CDS,intron-Distal	3.01648	4.19099	HepG2	PRPF4
chr12	6711193	6711277	-	CDS,intron-Distal	4.25596	28.47992	K562	UCHL5
chr12	6697016	6697062	-	CDS,intron-Distal,intron-Proximal	4.55508	14.29896	K562	FMR1
chr12	6696877	6696895	-	CDS,intron-Distal,intron-Proximal	3.11157	7.99225	K562	ZNF622
chr12	6710544	6710589	-	CDS,intron-Distal	4.45510	14.46827	K562	FXR2
chr12	6696706	6696723	-	CDS,intron-Distal	3.38113	6.00923	HepG2	FXR2
chr12	6687622	6687703	-	CDS,intron-Distal	5.43558	46.09589	K562	UCHL5
chr12	6696548	6696581	-	CDS,intron-Distal,intron-Proximal	3.38405	5.07467	HepG2	TRA2A
chr12	6687199	6687224	-	CDS,intron-Distal	3.53797	7.17964	K562	ZNF800
chr12	6711197	6711313	-	CDS,intron-Distal	3.01898	8.17617	K562	TRA2A
chr12	6711125	6711143	-	CDS,intron-Distal,intron-Proximal	5.32910	6.92104	HepG2	GRWD1
chr12	6692538	6692543	-	CDS,intron-Distal,intron-Proximal	4.36869	7.91706	K562	FMR1
chr12	6702280	6702314	-	CDS,intron-Distal	3.16466	6.26766	HepG2	FXR2
chr12	6687197	6687250	-	CDS,intron-Distal	3.26219	5.09443	HepG2	ZNF800
chr12	6707179	6707206	-	CDS,intron-Distal	3.61474	5.66445	K562	FMR1
chr12	6687049	6687079	-	CDS,intron-Distal	5.36216	7.01517	K562	FMR1
chr12	6710898	6710931	-	CDS,intron-Distal	4.23497	4.55369	K562	LIN28B
chr12	6696549	6696554	-	CDS,intron-Distal,intron-Proximal	4.26396	7.63320	K562	FMR1
chr12	6711574	6711593	-	CDS,intron-Distal	4.22536	9.41377	HepG2	GRWD1
chr12	6700631	6700675	-	CDS,intron-Distal,intron-Proximal	4.18284	13.75404	K562	FXR2
chr12	6687573	6687593	-	CDS,intron-Distal,intron-Proximal	4.64689	9.22094	HepG2	ZNF800
chr12	6709081	6709137	-	CDS,intron-Distal	5.46266	21.19956	K562	FXR2
chr12	6702580	6702624	-	CDS,intron-Distal,intron-Proximal	4.52033	10.03221	HepG2	LIN28B
chr12	6690456	6690474	-	CDS,intron-Distal,intron-Proximal	3.71180	9.20662	K562	DDX24
chr12	6687603	6687677	-	CDS,intron-Distal	3.35184	22.91836	K562	ZNF800
chr12	6710554	6710605	-	CDS,intron-Distal	3.32325	3.72699	HepG2	PRPF4
chr12	6691370	6691418	-	CDS,intron-Distal	3.44499	14.59078	HepG2	BCLAF1
chr12	6687255	6687303	-	CDS,intron-Distal	3.37080	5.03585	K562	HLTF
chr12	6687012	6687059	-	CDS,intron-Distal	3.47833	10.70078	K562	YBX3
chr12	6696658	6696693	-	CDS,intron-Distal	3.33332	8.08885	K562	GRWD1
chr12	6710812	6710861	-	CDS,intron-Distal,intron-Proximal	3.36382	14.39951	K562	PUM1
chr12	6710814	6710875	-	CDS,intron-Distal	3.71242	21.21399	K562	ZNF800
chr12	6692502	6692545	-	CDS,intron-Distal,intron-Proximal	3.43382	4.67398	HepG2	TRA2A
chr12	6711569	6711642	-	CDS,intron-Distal	3.41640	31.09698	K562	ZNF800
chr12	6690456	6690464	-	CDS,intron-Distal,intron-Proximal	3.97373	18.27527	K562	UCHL5
chr12	6710673	6710695	-	CDS,intron-Distal	3.22994	9.37943	HepG2	BCLAF1
chr12	6696622	6696686	-	CDS,intron-Distal	4.61786	30.05532	HepG2	BCLAF1
chr12	6687574	6687603	-	CDS,intron-Distal,intron-Proximal	3.28248	13.51500	K562	ZNF800
chr12	6711146	6711188	-	CDS,intron-Distal,intron-Proximal	4.72208	23.25590	K562	UCHL5
chr12	6687046	6687079	-	CDS,intron-Distal	3.95151	10.74658	K562	FXR2
chr12	6710927	6710932	-	CDS,intron-Distal	5.17133	6.03821	HepG2	GRWD1
chr12	6696949	6696989	-	CDS,intron-Distal	5.17554	13.18401	K562	FXR2
chr12	6687688	6687711	-	CDS,intron-Distal	3.99458	15.02746	K562	ZNF622
chr12	6691380	6691411	-	CDS,intron-Distal	3.31071	6.81129	K562	GRWD1
chr12	6687274	6687303	-	CDS,intron-Distal	3.10452	8.13987	K562	DDX24
chr12	6687700	6687711	-	CDS,intron-Distal	4.33512	11.22295	HepG2	BCLAF1
chr12	6688010	6688062	-	CDS,intron-Distal,intron-Proximal	3.87953	10.13718	HepG2	AQR
chr12	6692522	6692544	-	CDS,intron-Distal,intron-Proximal	4.04232	6.44064	K562	LIN28B
chr12	6711126	6711203	-	CDS,intron-Distal,intron-Proximal	3.36635	8.63423	K562	CPSF6
chr12	6690310	6690339	-	CDS,intron-Distal,intron-Proximal	4.10773	8.98140	K562	DDX24
chr12	6704565	6704584	-	CDS,intron-Distal	3.15942	7.74050	K562	UCHL5
chr12	6690314	6690339	-	CDS,intron-Distal,intron-Proximal	4.06064	3.91585	HepG2	PRPF4
chr12	6688010	6688047	-	CDS,intron-Distal,intron-Proximal	3.46776	10.33046	K562	CPSF6
chr12	6696688	6696724	-	CDS,intron-Distal	4.42002	18.33118	HepG2	BCLAF1
chr12	6687963	6688026	-	CDS,intron-Distal,intron-Proximal	3.44549	9.68935	K562	AQR
chr12	6687707	6687712	-	CDS,intron-Distal	4.31183	10.41499	HepG2	FXR2
chr12	6691338	6691383	-	CDS,intron-Distal	4.39821	13.28639	K562	FMR1
chr12	6710658	6710695	-	CDS,intron-Distal	3.41232	4.56843	HepG2	HLTF
chr12	6697021	6697062	-	CDS,intron-Distal,intron-Proximal	3.61915	7.94188	HepG2	FXR2
chr12	6690456	6690485	-	CDS,intron-Distal,intron-Proximal	4.73288	20.88881	HepG2	BCLAF1
chr12	6710549	6710598	-	CDS,intron-Distal	3.10861	5.76993	K562	GRWD1
chr12	6701137	6701181	-	CDS,intron-Distal	4.71456	12.87490	K562	FXR2
chr12	6707162	6707217	-	CDS,intron-Distal	3.50867	10.26919	K562	GRWD1
chr12	6702546	6702600	-	CDS,intron-Distal,intron-Proximal	3.33777	5.62208	HepG2	PRPF8
chr12	6687250	6687304	-	CDS,intron-Distal,intron-Proximal	3.94493	9.41835	HepG2	ZNF800
chr12	6687629	6687668	-	CDS,intron-Distal	5.75162	11.77024	K562	PUM1
chr12	6690317	6690339	-	CDS,intron-Distal,intron-Proximal	4.16428	18.58100	K562	UCHL5
chr12	6709443	6709488	-	CDS,intron-Distal	5.96064	12.71839	K562	FMR1
chr12	6687574	6687588	-	CDS,intron-Distal,intron-Proximal	3.99538	7.25463	HepG2	G3BP1
chr12	6692456	6692493	-	CDS,intron-Distal	3.05887	3.04625	HepG2	UCHL5
chr12	6710849	6710932	-	CDS,intron-Distal	3.44567	5.74856	HepG2	AGGF1
chr12	6687679	6687713	-	CDS,intron-Distal,intron-Proximal	4.18718	7.03021	HepG2	TRA2A
chr12	6687628	6687679	-	CDS,intron-Distal	3.81126	6.74675	HepG2	TRA2A
chr12	6697086	6697109	-	CDS,intron-Distal,intron-Proximal	4.59844	10.22357	K562	FXR2
chr12	6703761	6703793	-	CDS,intron-Distal	4.44274	9.91321	K562	FMR1
chr12	6697018	6697064	-	CDS,intron-Distal,intron-Proximal	3.04595	7.31060	HepG2	G3BP1
chr12	6696702	6696723	-	CDS,intron-Distal	3.19185	4.29961	K562	METAP2
chr12	6711327	6711387	-	CDS,intron-Distal,intron-Proximal	3.95708	15.90212	K562	AQR
chr12	6702274	6702313	-	CDS,intron-Distal	3.44192	8.25459	HepG2	G3BP1
chr12	6682312	6682351	-	CDS,intron-Distal	4.51543	10.40919	K562	FMR1
chr12	6692443	6692500	-	CDS,intron-Distal	4.33664	6.18239	K562	FXR1
chr12	6707089	6707119	-	CDS,intron-Distal	3.43436	13.12156	HepG2	BCLAF1
chr12	6711610	6711644	-	CDS,intron-Distal	3.19382	6.62961	K562	MTPAP
chr12	6710868	6710932	-	CDS,intron-Distal	3.25627	3.56519	HepG2	AQR
chr12	6690466	6690488	-	CDS,intron-Distal	4.95400	18.80346	K562	ZNF622
chr12	6709383	6709418	-	CDS,intron-Distal	3.58920	7.62028	K562	FMR1
chr12	6697019	6697070	-	CDS,intron-Distal,intron-Proximal	3.13333	5.32047	K562	FXR1
chr12	6691748	6691787	-	CDS,intron-Distal,intron-Proximal	4.12747	5.31213	HepG2	PRPF8
chr12	6692434	6692472	-	CDS,intron-Distal	4.81341	29.03261	K562	UCHL5
chr12	6691383	6691415	-	CDS,intron-Distal	3.80769	8.53736	K562	FMR1
chr12	6691342	6691397	-	CDS,intron-Distal	4.51896	6.37862	K562	FXR1
chr12	6690466	6690484	-	CDS,intron-Distal	5.44476	9.91422	HepG2	GRWD1
chr12	6710831	6710860	-	CDS,intron-Distal	4.20822	8.18712	K562	GRWD1
chr12	6710557	6710587	-	CDS,intron-Distal	3.31921	4.45081	HepG2	ZNF800
chr12	6692082	6692144	-	CDS,intron-Distal,intron-Proximal	3.28246	7.11699	K562	SF3B4
chr12	6710553	6710592	-	CDS,intron-Distal	3.73202	14.01338	K562	UCHL5
chr12	6692084	6692101	-	CDS,intron-Distal,intron-Proximal	3.70368	7.97712	K562	BUD13
chr12	6709437	6709487	-	CDS,intron-Distal	3.28924	3.89825	K562	FXR1
chr12	6692532	6692539	-	CDS,intron-Distal	3.83923	4.86632	HepG2	G3BP1
chr12	6703686	6703732	-	CDS,intron-Distal	4.17508	5.44557	K562	FXR1
chr12	6687573	6687617	-	CDS,intron-Distal,intron-Proximal	4.37808	14.00742	K562	PUM1
chr12	6697020	6697059	-	CDS,intron-Distal,intron-Proximal	3.97195	3.02618	HepG2	UCHL5
chr12	6697515	6697532	-	CDS,intron-Distal	3.91935	11.98752	K562	FXR2
chr12	6710668	6710696	-	CDS,intron-Distal	5.46440	9.24396	HepG2	GRWD1
chr12	6710868	6710931	-	CDS,intron-Distal	4.33350	33.30951	K562	UCHL5
chr12	6709533	6709585	-	CDS,intron-Distal,intron-Proximal	4.67621	13.62974	K562	AQR
chr12	6690462	6690483	-	CDS,intron-Distal	3.50064	5.76525	K562	PUM1
chr12	6690456	6690466	-	CDS,intron-Distal,intron-Proximal	4.81558	15.07226	K562	ZNF622
chr12	6701082	6701115	-	CDS,intron-Distal,intron-Proximal	3.81601	14.72633	HepG2	BCLAF1
chr12	6700600	6700646	-	CDS,intron-Distal,intron-Proximal	3.32588	7.02084	HepG2	PRPF8
chr12	6682329	6682364	-	CDS,intron-Distal	3.31632	7.82165	K562	FXR1
chr12	6687250	6687293	-	CDS,intron-Distal	4.00017	20.74060	K562	UCHL5
chr12	6687619	6687655	-	CDS,intron-Distal	3.15428	5.87296	K562	DDX24
chr12	6696555	6696572	-	CDS,intron-Distal	4.87359	5.71225	HepG2	G3BP1
chr12	6709089	6709134	-	CDS,intron-Distal	3.60289	9.77639	HepG2	G3BP1
chr12	6687201	6687245	-	CDS,intron-Distal	3.63428	8.35247	HepG2	GRWD1
chr12	6690456	6690466	-	CDS,intron-Distal,intron-Proximal	4.61326	9.05280	HepG2	GRWD1
chr12	6687197	6687250	-	CDS,intron-Distal	4.12496	19.17646	K562	UCHL5
chr12	6696948	6696990	-	CDS,intron-Distal	4.46737	9.73550	K562	FMR1
chr12	6692410	6692497	-	CDS,intron-Distal	4.62619	18.72273	HepG2	FXR2
chr12	6700975	6700989	-	CDS,intron-Distal,intron-Proximal	3.09311	7.43909	HepG2	BCLAF1
chr12	6696549	6696555	-	CDS,intron-Distal,intron-Proximal	4.74542	5.71225	HepG2	G3BP1
chr12	6688011	6688073	-	CDS,intron-Distal,intron-Proximal	5.18420	23.24642	HepG2	FXR2
chr12	6697017	6697060	-	CDS,intron-Distal,intron-Proximal	4.69215	22.99911	K562	FXR2
chr12	6680094	6680141	-	CDS,intron-Distal	3.18477	3.27682	HepG2	LARP4
chr12	6688011	6688082	-	CDS,intron-Distal,intron-Proximal	4.04799	11.15485	K562	TRA2A
chr12	6710873	6710932	-	CDS,intron-Distal	4.88965	34.75806	K562	ZNF622
chr12	6690464	6690493	-	CDS,intron-Distal	3.76881	16.78484	K562	UCHL5
chr12	6710569	6710609	-	CDS,intron-Distal	3.50510	7.35889	K562	PUM1
chr12	6702580	6702632	-	CDS,intron-Distal,intron-Proximal	5.46667	9.88915	K562	LIN28B
chr12	6710814	6710819	-	CDS,intron-Distal	4.36795	8.80691	HepG2	GRWD1
chr12	6710541	6710612	-	CDS,intron-Distal	3.01092	16.52561	K562	ZNF622
chr12	6691800	6691843	-	CDS,intron-Distal	3.95736	15.54811	HepG2	BCLAF1
chr12	6701649	6701672	-	CDS,intron-Distal,intron-Proximal	4.41211	12.29833	K562	FXR2
chr12	6688013	6688030	-	CDS,intron-Distal	4.27486	11.11870	HepG2	BCLAF1
chr12	6700631	6700644	-	CDS,intron-Distal,intron-Proximal	5.42820	8.42929	K562	FMR1
chr12	6710378	6710429	-	intron-Distal,intron-Proximal	4.34329	5.42080	K562	EFTUD2
chr12	6702536	6702556	-	intron-Distal,intron-Proximal	5.00107	4.13847	K562	AQR
chr12	6691737	6691780	-	intron-Distal,intron-Proximal	4.66263	3.62536	K562	AQR
chr12	6715630	6715692	-	intron-Distal,intron-Proximal	3.59574	4.14347	HepG2	XRN2
chr12	6716182	6716250	-	intron-Distal	4.03632	3.82414	HepG2	HNRNPK
chr12	6711851	6711939	-	intron-Distal	5.32747	7.51037	HepG2	HNRNPM
chr12	6716071	6716210	-	intron-Distal	5.00386	7.95752	K562	HNRNPK
chr12	6704464	6704492	-	intron-Distal,intron-Proximal	4.40517	4.22101	K562	PRPF8
chr12	6690655	6690660	-	intron-Distal	3.90940	400.00000	HepG2	DKC1
chr12	6715233	6715280	-	intron-Distal	3.83992	3.15719	K562	SMNDC1
chr12	6690762	6690773	-	intron-Distal,intron-Proximal	4.36441	400.00000	HepG2	DKC1
chr12	6715619	6715659	-	intron-Distal,intron-Proximal	3.54298	3.54718	K562	PRPF8
chr12	6715229	6715291	-	intron-Distal	3.51845	3.77708	K562	GTF2F1
chr12	6690136	6690175	-	intron-Distal,intron-Proximal	3.27856	5.46476	K562	AQR
chr12	6696733	6696781	-	intron-Distal,intron-Proximal	5.22775	5.90023	K562	SF3B4
chr12	6714990	6715098	-	intron-Distal	5.43065	12.06671	K562	HNRNPM
chr12	6690671	6690675	-	intron-Distal	3.85274	400.00000	HepG2	DKC1
chr12	6690740	6690762	-	intron-Distal,intron-Proximal	4.05183	400.00000	HepG2	DKC1
chr12	6709854	6709882	-	intron-Distal,intron-Proximal	4.93768	4.40745	K562	SF3B4
chr12	6715306	6715438	-	intron-Distal,intron-Proximal	3.11227	6.67373	K562	PRPF8
chr12	6714603	6714736	-	intron-Distal	3.74859	10.70082	HepG2	HNRNPM
chr12	6715622	6715701	-	intron-Distal,intron-Proximal	4.06550	6.08339	HepG2	SF3B4
chr12	6702556	6702581	-	intron-Distal,intron-Proximal	4.78459	4.13847	K562	AQR
chr12	6690130	6690171	-	intron-Distal,intron-Proximal	5.11414	7.58908	K562	PRPF8
chr12	6714935	6714959	-	intron-Distal	4.09361	3.60235	HepG2	HNRNPM
chr12	6716075	6716182	-	intron-Distal	4.63382	6.13079	HepG2	HNRNPK
chr12	6714332	6714451	-	intron-Distal	3.05081	3.66723	K562	MATR3
chr12	6696265	6696348	-	intron-Distal	3.43263	5.20123	K562	KHSRP
chr12	6715109	6715188	-	intron-Distal	4.80116	6.10662	K562	HNRNPM
chr12	6716436	6716465	-	intron-Distal	4.59162	6.01372	K562	AQR
chr12	6716048	6716146	-	intron-Distal	5.99950	11.75245	HepG2	DDX59
chr12	6714171	6714223	-	intron-Distal	3.63841	4.81774	K562	HNRNPM
chr12	6715034	6715097	-	intron-Distal	3.51499	3.14999	K562	EXOSC5
chr12	6690660	6690671	-	intron-Distal	3.91317	400.00000	HepG2	DKC1
chr12	6690716	6690740	-	intron-Distal,intron-Proximal	3.90345	400.00000	HepG2	DKC1
chr12	6716421	6716436	-	intron-Distal	4.73482	6.77156	K562	AQR
chr12	6714685	6714733	-	intron-Distal	3.50749	6.55884	K562	HNRNPM
chr12	6714786	6714848	-	intron-Distal	4.64353	3.89080	K562	EXOSC5
chr12	6690124	6690174	-	intron-Distal,intron-Proximal	5.02457	8.68241	K562	EFTUD2
chr12	6714651	6714760	-	intron-Distal	3.01312	4.12418	HepG2	MATR3
chr12	6714083	6714151	-	intron-Distal	4.81407	6.62732	K562	HNRNPM
chr12	6704457	6704498	-	intron-Distal,intron-Proximal	4.89234	5.17615	K562	AQR
chr12	6690645	6690655	-	intron-Distal,intron-Proximal	4.18942	400.00000	HepG2	DKC1
chr12	6690696	6690707	-	intron-Distal	3.93364	400.00000	HepG2	DKC1
chr12	6682203	6682239	-	intron-Distal,intron-Proximal	4.28452	5.93840	HepG2	PRPF8
chr12	6712282	6712365	-	intron-Distal,intron-Proximal	4.52287	4.48560	K562	EXOSC5
chr12	6711482	6711541	-	intron-Distal,intron-Proximal	4.11771	5.89850	HepG2	AQR
chr12	6690675	6690696	-	intron-Distal	3.87901	400.00000	HepG2	DKC1
chr12	6715917	6715958	-	intron-Distal,intron-Proximal	3.75943	3.67675	HepG2	DDX59
chr12	6681726	6681796	-	intron-Distal	4.16312	4.58424	HepG2	ILF3
chr12	6716146	6716291	-	intron-Distal	6.04261	12.14799	HepG2	DDX59
chr12	6701524	6701553	-	intron-Distal,intron-Proximal	3.93262	5.26367	K562	AQR
chr12	6715233	6715306	-	intron-Distal	3.82891	7.05055	K562	PRPF8
chr12	6690637	6690645	-	intron-Distal,intron-Proximal	5.04798	400.00000	HepG2	DKC1
chr12	6715370	6715439	-	intron-Distal,intron-Proximal	6.34510	14.81397	K562	AQR
chr12	6714183	6714232	-	intron-Distal	3.35089	3.68481	HepG2	HNRNPM
chr12	6690707	6690714	-	intron-Distal	3.91655	400.00000	HepG2	DKC1
chr12	6691914	6691961	-	intron-Distal,intron-Proximal	4.13795	4.69223	K562	SF3B4
chr12	6715160	6715200	-	intron-Distal	4.35089	4.12480	HepG2	HNRNPM
chr12	6711492	6711522	-	intron-Distal,intron-Proximal	6.41611	18.58475	K562	AQR
chr12	6714983	6715051	-	intron-Distal	4.53084	4.31871	HepG2	HNRNPM
chr12	6710704	6710724	-	intron-Distal,intron-Proximal	4.54985	4.48002	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CHD4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CHD4 is not available on ENCORE database.
96 RBPs can affect the levels of CHD4.

The Knockdown/knockout RNA-Seq assay for CHD4 is not available on ENCORE database.

96 RBPs can affect the gene expression of CHD4 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CHD4	ENSG00000111642.10	7266.31000	5944.20500	0.28960	1.84990	1.40540	HepG2	AKAP1
CHD4	ENSG00000111642.10	6894.51110	5947.71000	0.21300	3.12410	2.31500	HepG2	AKAP8L
CHD4	ENSG00000111642.10	7080.73630	4918.25640	0.52570	6.08200	4.93900	HepG2	ASCC1
CHD4	ENSG00000111642.10	3652.02450	4707.88680	-0.36640	2.93620	2.00850	HepG2	BCLAF1
CHD4	ENSG00000111642.10	5245.13940	7019.86000	-0.42050	5.12350	4.33990	HepG2	BOP1
CHD4	ENSG00000111642.10	6210.05000	4672.70610	0.41020	4.06170	3.13480	HepG2	CIRBP
CHD4	ENSG00000111642.10	3115.38480	4080.88560	-0.38950	1.94060	1.30510	HepG2	CNOT7
CHD4	ENSG00000111642.10	5108.54180	6444.63870	-0.33520	3.19750	2.46360	HepG2	CPSF6
CHD4	ENSG00000111642.10	4048.63460	4802.90330	-0.24650	3.21780	2.11830	HepG2	YBX3
CHD4	ENSG00000111642.10	6069.38840	7157.72450	-0.23790	3.88890	3.03400	HepG2	DAZAP1
CHD4	ENSG00000111642.10	6417.79130	5475.02170	0.22910	4.30570	3.29330	HepG2	DDX19B
CHD4	ENSG00000111642.10	4117.69970	4809.57170	-0.22410	2.63370	1.50560	HepG2	DDX1
CHD4	ENSG00000111642.10	3950.79960	4716.04450	-0.25540	3.40600	2.63090	HepG2	DNAJC21
CHD4	ENSG00000111642.10	3564.56210	4674.46810	-0.39110	11.40710	10.18190	HepG2	DNAJC2
CHD4	ENSG00000111642.10	3438.44890	4702.02880	-0.45150	4.42950	3.68870	HepG2	EIF2S1
CHD4	ENSG00000111642.10	4569.09930	3480.77430	0.39240	3.74400	2.70180	HepG2	EIF3D
CHD4	ENSG00000111642.10	5624.00890	4506.46900	0.31950	2.72310	1.64960	HepG2	EIF3G
CHD4	ENSG00000111642.10	7942.95790	5059.49040	0.65060	5.93030	4.95120	HepG2	EIF4B
CHD4	ENSG00000111642.10	5457.31580	6765.11280	-0.30990	2.63180	1.83610	HepG2	EIF4G2
CHD4	ENSG00000111642.10	7721.01430	5243.20680	0.55820	6.77910	5.72520	HepG2	FXR1
CHD4	ENSG00000111642.10	6815.10860	4863.55640	0.48660	4.75900	3.89750	HepG2	G3BP1
CHD4	ENSG00000111642.10	7111.69920	5163.66320	0.46170	5.02670	3.81620	HepG2	G3BP2
CHD4	ENSG00000111642.10	3798.38080	3099.17830	0.29340	2.26190	1.45930	HepG2	GEMIN5
CHD4	ENSG00000111642.10	4519.14860	5296.00650	-0.22890	1.89870	1.31260	HepG2	HNRNPC
CHD4	ENSG00000111642.10	5677.80320	7425.60980	-0.38720	9.45430	8.22680	HepG2	HNRNPF
CHD4	ENSG00000111642.10	6626.78100	4925.46090	0.42790	4.95710	4.04330	HepG2	HNRNPK
CHD4	ENSG00000111642.10	5403.43300	6519.86120	-0.27100	5.36760	4.45490	HepG2	HNRNPL
CHD4	ENSG00000111642.10	4797.85850	6971.83200	-0.53910	6.83050	5.89200	HepG2	HNRNPLL
CHD4	ENSG00000111642.10	4673.73180	5260.99080	-0.17080	2.21780	1.66960	HepG2	HNRNPU
CHD4	ENSG00000111642.10	5595.32300	7312.07270	-0.38610	5.98320	4.95940	HepG2	IGF2BP1
CHD4	ENSG00000111642.10	4307.83270	5373.92410	-0.31900	8.84290	7.60380	HepG2	ILF2
CHD4	ENSG00000111642.10	6768.62080	4972.60430	0.44480	3.32260	2.21180	HepG2	KHSRP
CHD4	ENSG00000111642.10	8024.82790	5274.30690	0.60540	6.80080	5.84550	HepG2	MATR3
CHD4	ENSG00000111642.10	4798.73380	3642.94040	0.39750	2.34210	1.37140	HepG2	METAP2
CHD4	ENSG00000111642.10	6718.28390	5398.47430	0.31540	2.35210	1.76560	HepG2	NCBP2
CHD4	ENSG00000111642.10	5837.03810	7097.63400	-0.28210	3.44260	2.59330	HepG2	NOL12
CHD4	ENSG00000111642.10	5855.22190	4985.36510	0.23190	3.75920	3.07500	HepG2	PCBP1
CHD4	ENSG00000111642.10	3918.78900	4692.37950	-0.25990	3.39260	2.58370	HepG2	PPIL4
CHD4	ENSG00000111642.10	6881.75270	6088.99390	0.17650	2.26180	1.55540	HepG2	PRPF4
CHD4	ENSG00000111642.10	7354.85860	5072.95270	0.53580	16.31360	15.19850	HepG2	PTBP1
CHD4	ENSG00000111642.10	5660.02000	6775.56670	-0.25950	2.28390	1.73470	HepG2	PUF60
CHD4	ENSG00000111642.10	8657.15700	7192.86040	0.26720	5.29130	4.52520	HepG2	PUM1
CHD4	ENSG00000111642.10	5396.54530	6029.72000	-0.16010	2.25820	1.68880	HepG2	PUS1
CHD4	ENSG00000111642.10	6901.06220	5493.79790	0.32890	5.12390	4.31400	HepG2	QKI
CHD4	ENSG00000111642.10	6485.96300	4986.10130	0.37930	5.11370	4.22330	HepG2	RBM25
CHD4	ENSG00000111642.10	8818.38710	5645.57860	0.64330	25.11570	23.81130	HepG2	NELFE
CHD4	ENSG00000111642.10	7147.12870	5258.32620	0.44270	12.60410	11.43380	HepG2	RECQL
CHD4	ENSG00000111642.10	5480.87880	7999.69740	-0.54550	8.89320	7.77550	HepG2	RPLP0
CHD4	ENSG00000111642.10	3447.81010	4685.13170	-0.44240	13.06420	11.81690	HepG2	SAFB2
CHD4	ENSG00000111642.10	4213.42160	3399.31770	0.30960	2.61260	1.69990	HepG2	SERBP1
CHD4	ENSG00000111642.10	5183.84700	6900.77560	-0.41270	4.82570	3.91550	HepG2	SF3B1
CHD4	ENSG00000111642.10	6829.59070	5281.31660	0.37080	8.90380	7.93490	HepG2	SF3B4
CHD4	ENSG00000111642.10	5646.96750	6497.32240	-0.20240	2.65660	1.96660	HepG2	SLBP
CHD4	ENSG00000111642.10	8378.20980	5512.66620	0.60380	25.48390	24.36520	HepG2	SRSF1
CHD4	ENSG00000111642.10	7451.57420	6690.24130	0.15540	2.24420	1.67340	HepG2	SRSF5
CHD4	ENSG00000111642.10	5509.12680	7295.53090	-0.40520	10.51020	9.30400	HepG2	SRSF7
CHD4	ENSG00000111642.10	5697.83350	4484.94670	0.34520	8.21610	7.35520	HepG2	SRSF9
CHD4	ENSG00000111642.10	9440.82050	7608.34260	0.31120	3.64430	2.94870	HepG2	SUCLG1
CHD4	ENSG00000111642.10	6750.76210	4955.31860	0.44600	9.62230	8.67810	HepG2	TAF15
CHD4	ENSG00000111642.10	4830.82300	6795.19760	-0.49220	6.47080	5.42370	HepG2	TARDBP
CHD4	ENSG00000111642.10	4140.32000	5111.95100	-0.30410	3.75220	3.18870	HepG2	TIAL1
CHD4	ENSG00000111642.10	3815.41420	5157.73890	-0.43490	11.07700	10.06100	HepG2	TRIM56
CHD4	ENSG00000111642.10	2196.33670	3132.66750	-0.51230	5.43540	4.36430	HepG2	UCHL5
CHD4	ENSG00000111642.10	7122.39350	6059.31460	0.23310	4.20200	3.48810	HepG2	UTP3
CHD4	ENSG00000111642.10	5319.07000	6009.07430	-0.17600	2.93360	2.24510	HepG2	ZC3H8
CHD4	ENSG00000111642.10	5891.94230	6902.49260	-0.22840	5.22890	4.53730	HepG2	ZNF622
CHD4	ENSG00000111642.10	8368.80320	6707.53560	0.31910	3.56920	2.20990	K562	AARS
CHD4	ENSG00000111642.10	10557.64940	9031.28960	0.22520	3.95430	3.29830	K562	AGGF1
CHD4	ENSG00000111642.10	8308.97390	14685.78180	-0.82170	17.33920	16.03400	K562	AQR
CHD4	ENSG00000111642.10	7728.49340	8820.89700	-0.19070	2.23480	1.37140	K562	BCLAF1
CHD4	ENSG00000111642.10	4268.32300	5257.34150	-0.30070	2.53910	1.53780	K562	CCAR1
CHD4	ENSG00000111642.10	10234.51520	17025.51200	-0.73430	2.97130	1.86410	K562	CNOT7
CHD4	ENSG00000111642.10	7973.24640	9635.30030	-0.27320	3.14200	2.30500	K562	CPSF6
CHD4	ENSG00000111642.10	9501.07770	11317.87500	-0.25240	4.23350	2.71610	K562	DDX21
CHD4	ENSG00000111642.10	18969.37570	15362.76060	0.30410	6.45100	5.51390	K562	DDX47
CHD4	ENSG00000111642.10	11993.72020	13641.79940	-0.18580	2.35680	1.68430	K562	EIF2S2
CHD4	ENSG00000111642.10	9785.33440	7077.10950	0.46740	9.96260	8.44700	K562	EIF3G
CHD4	ENSG00000111642.10	5994.81680	7293.55800	-0.28290	2.62060	1.82270	K562	EIF4A3
CHD4	ENSG00000111642.10	8986.26450	12963.43750	-0.52870	7.98140	6.46450	K562	FIP1L1
CHD4	ENSG00000111642.10	4866.05750	6370.97380	-0.38880	3.46420	2.18300	K562	FKBP4
CHD4	ENSG00000111642.10	5746.38140	8309.09120	-0.53200	5.40690	4.08300	K562	FTO
CHD4	ENSG00000111642.10	11496.66130	7584.99760	0.59990	19.36840	17.88370	K562	FXR1
CHD4	ENSG00000111642.10	9554.60080	11896.97570	-0.31630	5.15040	3.62170	K562	GLRX3
CHD4	ENSG00000111642.10	6143.26310	9199.47590	-0.58250	10.06950	8.54130	K562	GPKOW
CHD4	ENSG00000111642.10	9822.94790	18178.85040	-0.88800	25.60550	23.20490	K562	GRSF1
CHD4	ENSG00000111642.10	9312.17840	11074.19940	-0.25000	2.57230	1.53600	K562	HNRNPA1
CHD4	ENSG00000111642.10	4579.91730	7340.79230	-0.68060	14.61320	13.32750	K562	HNRNPC
CHD4	ENSG00000111642.10	11721.19040	8755.79800	0.42070	4.22550	2.65480	K562	HNRNPK
CHD4	ENSG00000111642.10	10192.87800	17576.11330	-0.78610	16.24330	14.41830	K562	HSPD1
CHD4	ENSG00000111642.10	5805.11210	7854.85030	-0.43630	3.18460	2.17540	K562	KRR1
CHD4	ENSG00000111642.10	13102.86780	11172.44860	0.22980	2.40370	1.56480	K562	MBNL1
CHD4	ENSG00000111642.10	15717.61630	19862.97470	-0.33770	3.10560	1.90550	K562	MSI2
CHD4	ENSG00000111642.10	9180.29560	12508.17490	-0.44630	14.57190	12.88820	K562	MTPAP
CHD4	ENSG00000111642.10	11445.91580	13897.38920	-0.28000	11.09170	9.73670	K562	NSUN2
CHD4	ENSG00000111642.10	10089.16300	12547.08600	-0.31450	2.54640	1.74850	K562	PCBP3
CHD4	ENSG00000111642.10	9785.39490	14715.60900	-0.58860	8.98950	7.29710	K562	PPIG
CHD4	ENSG00000111642.10	5293.97420	6581.61760	-0.31410	3.30650	2.30520	K562	PSIP1
CHD4	ENSG00000111642.10	12092.23880	8952.71930	0.43360	6.84610	5.83660	K562	PTBP1
CHD4	ENSG00000111642.10	13237.33630	9319.98790	0.50610	7.29900	6.46420	K562	PUS1
CHD4	ENSG00000111642.10	10883.67840	9080.65480	0.26120	3.64740	2.98010	K562	RBM15
CHD4	ENSG00000111642.10	14283.57360	17239.77240	-0.27140	3.08900	1.38820	K562	RBM17
CHD4	ENSG00000111642.10	4621.21520	5791.10460	-0.32560	3.06880	1.73350	K562	SLBP
CHD4	ENSG00000111642.10	11282.67620	8777.05250	0.36220	5.11520	4.15790	K562	SRSF1
CHD4	ENSG00000111642.10	8682.74740	10100.12380	-0.21810	3.06080	1.82430	K562	SRSF7
CHD4	ENSG00000111642.10	6087.56990	8533.78930	-0.48730	4.92850	3.53780	K562	SUPV3L1
CHD4	ENSG00000111642.10	4794.89570	6330.51570	-0.40080	3.68530	2.60340	K562	TIAL1
CHD4	ENSG00000111642.10	5456.35220	6724.43090	-0.30150	2.82990	1.87170	K562	TRIM56
CHD4	ENSG00000111642.10	6904.68930	9031.95410	-0.38750	3.85900	2.63800	K562	UCHL5
CHD4	ENSG00000111642.10	12289.11330	14735.72150	-0.26190	4.58760	3.68660	K562	UPF1
CHD4	ENSG00000111642.10	9426.17170	12608.85060	-0.41970	6.27190	4.92230	K562	WDR3
CHD4	ENSG00000111642.10	7325.40200	9197.03670	-0.32830	2.84450	1.61610	K562	XRN2
CHD4	ENSG00000111642.10	12071.09720	16544.99730	-0.45480	6.47340	5.06570	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CHD4 is not available on ENCORE database.

11 RBPs can affect the splicing of CHD4 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CHD4	ENSG00000111642.10	chr12	-	6682324	6682435	6679968	6680198	6686950	6687097	-0.05300	0.00002	0.00044	excluded	K562	AQR
A3SS	CHD4	ENSG00000111642.10	chr12	-	6711125	6711341	6711125	6711320	6711541	6711663	-0.19600	0.00002	0.05225	shorter	K562	GEMIN5
A3SS	CHD4	ENSG00000111642.10	chr12	-	6711125	6711341	6711125	6711320	6711541	6711663	-0.14800	0.00057	0.04529	shorter	HepG2	SF3A3
A3SS	CHD4	ENSG00000111642.10	chr12	-	6711125	6711341	6711125	6711320	6711541	6711663	0.25700	0.00000	0.00000	longer	K562	U2AF2
A3SS	CHD4	ENSG00000111642.10	chr12	-	6711125	6711341	6711125	6711320	6711541	6711663	0.33100	0.00000	0.00000	longer	HepG2	U2AF2
A3SS	CHD4	ENSG00000111642.10	chr12	-	6709382	6709561	6709382	6709522	6709699	6709752	-0.17200	0.00022	0.00743	shorter	HepG2	U2AF2
A3SS	CHD4	ENSG00000111642.10	chr12	-	6692397	6692643	6692397	6692544	6696549	6696770	0.05300	0.00000	0.00000	longer	K562	AQR
A3SS	CHD4	ENSG00000111642.10	chr12	-	6705171	6705400	6705171	6705303	6707059	6707300	0.06000	0.00000	0.00000	longer	K562	AQR
A3SS	CHD4	ENSG00000111642.10	chr12	-	6688012	6688113	6688012	6688083	6690203	6690330	0.26200	0.00000	0.00001	longer	K562	AQR
A3SS	CHD4	ENSG00000111642.10	chr12	-	6682324	6682541	6682324	6682435	6686950	6687097	0.06400	0.00000	0.00000	longer	K562	AQR
A3SS	CHD4	ENSG00000111642.10	chr12	-	6692397	6692643	6692397	6692541	6696549	6696770	-0.07100	0.00461	0.02688	shorter	K562	AQR
A3SS	CHD4	ENSG00000111642.10	chr12	-	6711125	6711341	6711125	6711320	6711541	6711663	-0.17500	0.00011	0.08167	shorter	K562	SERBP1
A3SS	CHD4	ENSG00000111642.10	chr12	-	6711125	6711341	6711125	6711320	6711541	6711663	0.28700	0.00000	0.00000	longer	HepG2	U2AF1
A3SS	CHD4	ENSG00000111642.10	chr12	-	6711125	6711341	6711125	6711320	6711541	6711663	0.20000	0.00003	0.00233	longer	K562	U2AF1
A3SS	CHD4	ENSG00000111642.10	chr12	-	6711125	6711341	6711125	6711320	6711541	6711663	0.18100	0.00011	0.04232	longer	HepG2	TBRG4
A3SS	CHD4	ENSG00000111642.10	chr12	-	6686950	6687097	6686950	6687083	6687194	6687303	0.05900	0.00001	0.00103	longer	HepG2	SF3B4
RI	CHD4	ENSG00000111642.10	chr12	-	6692192	6692544	6692192	6692279	6692363	6692544	0.10800	0.00000	0.00000	included	K562	SF3B4
RI	CHD4	ENSG00000111642.10	chr12	-	6692192	6692544	6692192	6692279	6692363	6692544	0.07600	0.00257	0.06979	included	K562	SF3B1
RI	CHD4	ENSG00000111642.10	chr12	-	6692192	6692544	6692192	6692279	6692363	6692544	0.16400	0.00000	0.00000	included	HepG2	U2AF2
RI	CHD4	ENSG00000111642.10	chr12	-	6692192	6692544	6692192	6692279	6692363	6692544	0.06000	0.00000	0.00002	included	K562	PRPF8
RI	CHD4	ENSG00000111642.10	chr12	-	6692192	6692544	6692192	6692279	6692363	6692544	0.09400	0.00006	0.00107	included	HepG2	U2AF1
RI	CHD4	ENSG00000111642.10	chr12	-	6692192	6692544	6692192	6692279	6692363	6692544	0.07200	0.00000	0.00000	included	K562	EFTUD2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CHD4

General Information

Functions

Localization

Domains (AlphaFold: CHD4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CHD4 is not avaliable on ENCORE database.

64 proteins are bound to CHD4 RNA:

eCLIP assay for CHD4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CHD4 is not available on ENCORE database.

96 RBPs can affect the gene expression of CHD4 :

The Knockdown/knockout RNA-Seq assay for CHD4 is not available on ENCORE database.

11 RBPs can affect the splicing of CHD4 :

The Knockdown/knockout RNA-Seq assay for CHD4 is not avaliable on ENCORE database.