RBM17

General Information

Gene Name       : RBM17
Gene ID             : ENSG00000134453.15
Essential Gene : Yes

Functions

Localization(RBPImage: RBM17)

Domains (AlphaFold: RBM17)


Antibody Validation

 View validation images for all RBM17 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RBM17ENSG00000134453.15100.97105.92103.44ENCSR000AEF
HepG2RBM17ENSG00000134453.15101.18115.87108.53ENCSR985KAT
K562RBM17ENSG00000134453.15140.33145.81143.07ENCSR000AEO

Assays

3 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq RBM17-BGKLV29-K562ENCSR898OPNRBM17K562ReleasedENCSR118EFE   shRNAKD% = 80.1,80.3
knockdown followed by RNA-seq RBM17-BGHLV26-HepG2ENCSR385TMYRBM17HepG2ReleasedENCSR104ABF   shRNAKD% = 85.0,93.3
knockdown followed by RNA-seq RBM17-BGKcLV30-K562ENCSR012YILRBM17K562ReleasedENCSR347NKX   CRISPRKD% = 52.6,53.2






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
RBM17ENCAB959TNRA302-498A1Released, ENCODE3Released, ENCODE3BGHLV26-37, Released, ENCODE3BGKLV29-53, Released, ENCODE3
RBM17ENCAB724GMWA302-497A2Released, ENCODE3Released, ENCODE4BGHLV26-37, Released, ENCODE3BGKcLV30-9, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RBM17K562shRNABGKLV11-39,BGKLV11-40BGKLV11-1,BGKLV11-2NotSatisfiedENCODE3
RBM17K562shRNABGKLV25-49,BGKLV25-50BGKLV25-1,BGKLV25-2redo transduction,redo transductionNotSatisfiedENCODE3
RBM17K562shRNAENCSR898OPNENCSR118EFERBM17_BGKLV29-53B,RBM17_BGKLV29-54BNTB_BGKLV29-1,NTB_BGKLV29-280.1,80.3ReleasedENCODE3
RBM17HepG2shRNABGHLV23-37,BGHLV23-38BGHLV23-1,BGHLV23-2NotSatisfiedENCODE3
RBM17HepG2shRNAENCSR385TMYENCSR104ABFRBM17_BGHLV26_37,RBM17_BGHLV26_38non-target_BGHLV26-1,non-target_BGHLV26-285.0,93.3ReleasedENCODE3
RBM17K562CRISPRBGKcLV30-7,BGKcLV30-8BGKcLV30-1,BGKcLV30-20.0,0.0NotSatisfiedENCODE4
RBM17K562CRISPRENCSR012YILENCSR347NKXRBM17-BGKcLV30-9,RBM17-BGKcLV30-10NT-BGKcLV30-1,NT-BGKcLV30-252.6,53.2ReleasedENCODE4
RBM17HepG2CRISPRBGHcLV32-7,BGHcLV32-8BGHcLV32-1,BGHcLV32-20.0,0.0NotSatisfiedENCODE4
RBM17HepG2CRISPRBGHcLV34-25,BGHcLV34-26BGHcLV34-1,BGHcLV34-20.0,0.0NotSatisfiedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    RBM17: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Speckles
  • Cytoplasm
  • Compartment/Organelle
  • Unknown Cyto Foci
  • Cytosolic
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    RBM17Product_ID: A302-498A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: RBM17-human    		 HepG2_Bethyl_A302-498A_1_RBM17.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using RBM17 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-RBM17 antibody (lanes under 'RBM17').
    		 RBM17_Secondary_Western.png<br>Caption: Western blot following shRNA against RBM17 in HepG2 whole cell lysate using RBM17 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against RBM17. RBM17 protein appears as the green band, GAPDH serves as a control and appears in red.
    		 K562_Bethyl_A302-498A_1_RBM17.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using RBM17 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-RBM17 antibody (lanes under 'RBM17').
    		 RBM17-K562_Secondary_Western.png<br>Caption: Western blot following shRNA against RBM17 in K562 whole cell lysate using RBM17 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against RBM17.RBM17 protein appears as the green band, GAPDH serves as a control and appears in red.
    RBM17Product_ID: A302-497A
    Lot_ID: 2
    Source: Bethyl Labs
    Target Name: RBM17-human    		 Bethyl_A302-497A_2_RBM17.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RBM17 specific antibody, A302-497A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the RBM17-specific antibody, A302-497A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    		 RBM17-K562-CRISPR-A302-497A.png<br>Caption: Western blot following CRISPR against RBM17 in K562 whole cell lysate using RBM17 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RBM17. RBM17 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








    RNA Targets

    • eCLIP assay for RBM17 is not avaliable on ENCORE database.



    Proteins bound to RNA
    • RBM17 RNA is bound by 22 proteins.  







    eCLIP assay for RBM17 is not avaliable on ENCORE database.





    22 proteins are bound to RBM17 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr1061313936131451+5'-UTR,intron-Distal4.483204.97123HepG2PCBP2
    chr1061389566139019+5'-UTR,intron-Distal,intron-Proximal4.5215213.88854HepG2BUD13
    chr1061310726131127+5'-UTR5.6122120.77932K562DDX3X
    chr1061389486139038+5'-UTR,CDS,intron-Distal,intron-Proximal3.008054.74618HepG2AQR
    chr1061390026139077+5'-UTR,CDS,intron-Distal,intron-Proximal3.312773.84837K562GRWD1
    chr1061389786139076+5'-UTR,CDS,intron-Distal,intron-Proximal3.2865711.93953K562BUD13
    chr1061311276131157+5'-UTR,CDS,intron-Proximal6.4573915.52410K562DDX3X
    chr1061310096131215+5'-UTR,CDS,intron-Proximal4.3844712.95073K562FMR1
    chr1061390196139071+5'-UTR,CDS,intron-Distal3.1889313.48688HepG2BUD13
    chr1061389666139036+5'-UTR,CDS,intron-Distal,intron-Proximal4.012969.01749K562SF3B4
    chr1061311516131232+5'-UTR,CDS,intron-Proximal5.3405416.79021HepG2PRPF8
    chr1061310886131256+5'-UTR,CDS,intron-Proximal3.423385.12149K562XRN2
    chr1061310176131072+5'-UTR5.295738.81962K562DDX3X
    chr1061310076131158+5'-UTR,CDS,intron-Proximal4.6895729.96043HepG2DDX3X
    chr1061309996131156+5'-UTR,CDS4.1510010.35242K562FXR2
    chr1061390166139079+5'-UTR,CDS,intron-Distal3.749816.39282HepG2GRWD1
    chr1061311346131171+5'-UTR,CDS,intron-Proximal3.599023.57000HepG2BUD13
    chr1061543176154326+CDS,intron-Proximal4.013618.57807K562YBX3
    chr1061469646147063+CDS,intron-Proximal3.8172012.41117K562UCHL5
    chr1061560976156108+CDS4.152333.87582K562ZNF622
    chr1061571996157240+CDS,intron-Proximal3.149906.50677K562UCHL5
    chr1061542996154365+CDS,intron-Proximal4.3980613.47152HepG2PRPF8
    chr1061560096156111+CDS,intron-Proximal5.5690722.24508K562UCHL5
    chr1061560086156074+CDS,intron-Proximal4.030277.73763HepG2BUD13
    chr1061519626152034+CDS3.583537.03584HepG2GRWD1
    chr1061541266154183+CDS,intron-Proximal4.355646.10653K562SF3B4
    chr1061554136155483+CDS,intron-Proximal4.4082311.17285K562SF3B4
    chr1061541726154296+CDS,intron-Proximal3.6322410.40519HepG2GRWD1
    chr1061507026150805+CDS,intron-Proximal3.421437.70675K562AQR
    chr1061481086148204+CDS,intron-Proximal3.8418017.20955K562UCHL5
    chr1061543146154343+CDS,intron-Proximal4.9860717.54254K562AQR
    chr1061542756154357+CDS,intron-Proximal3.549683.07278HepG2UCHL5
    chr1061571526157205+CDS,intron-Proximal3.193164.94119K562SF3B4
    chr1061432946143346+CDS3.947755.51703K562BUD13
    chr1061572406157275+CDS,intron-Proximal3.395835.71803K562UCHL5
    chr1061481076148204+CDS,intron-Proximal3.2354913.98122K562ZNF622
    chr1061560136156113+CDS,intron-Proximal4.3860612.20601HepG2BCLAF1
    chr1061468926146910+CDS,intron-Proximal3.039303.41227K562UCHL5
    chr1061542966154344+CDS,intron-Proximal3.498568.10680HepG2GRWD1
    chr1061542946154355+CDS,intron-Proximal3.097257.85100HepG2PPIG
    chr1061432456143312+CDS3.068544.59294HepG2GRWD1
    chr1061572386157277+CDS,intron-Proximal4.349927.97334HepG2BCLAF1
    chr1061506476150690+CDS,intron-Proximal4.761625.37137HepG2BCLAF1
    chr1061390936139149+CDS,intron-Distal3.545145.76104HepG2BCLAF1
    chr1061481126148211+CDS,intron-Proximal4.211507.89209HepG2BCLAF1
    chr1061554736155488+CDS4.279223.22721K562YBX3
    chr1061542916154367+CDS,intron-Proximal3.246075.00875K562BUD13
    chr1061555256155587+CDS,intron-Proximal4.163684.75655HepG2PRPF8
    chr1061543536154367+CDS,intron-Proximal6.3221715.72370K562AQR
    chr1061506156150687+CDS,intron-Proximal3.2743311.39927K562SF3B4
    chr1061390816139152+CDS,intron-Distal,intron-Proximal3.288646.01489HepG2GRWD1
    chr1061433156143351+CDS,intron-Proximal3.589216.97987K562ZNF622
    chr1061554946155542+CDS3.695874.96634HepG2PPIG
    chr1061554566155538+CDS,intron-Proximal3.599728.66286K562BUD13
    chr1061572016157226+CDS,intron-Proximal3.345843.36945K562ZNF622
    chr1061433126143350+CDS3.582723.79741HepG2GRWD1
    chr1061481176148206+CDS,intron-Proximal3.991316.18214HepG2GRWD1
    chr1061560146156075+CDS3.387077.58463K562ZNF622
    chr1061542546154317+CDS3.404569.32710K562YBX3
    chr1061542926154372+CDS,intron-Proximal3.476996.31501K562SF3B4
    chr1061554886155540+CDS3.103355.71803K562UCHL5
    chr1061481136148200+CDS3.218086.12136HepG2BUD13
    chr1061433296143386+CDS,intron-Proximal4.4409913.91247HepG2PRPF8
    chr1061572456157300+CDS,intron-Proximal3.428164.06013K562PRPF8
    chr1061541576154202+CDS,intron-Proximal3.556923.21003K562U2AF2
    chr1061574116157517+CDS,intron-Proximal3.196629.12012HepG2BCLAF1
    chr1061311876131287+intron-Distal,intron-Proximal5.037815.02942K562EFTUD2
    chr1061507436150817+intron-Distal,intron-Proximal3.120444.05798K562U2AF2
    chr1061335896133683+intron-Distal3.963626.07515K562QKI
    chr1061477926147836+intron-Distal3.827803.45805K562KHSRP
    chr1061503366150441+intron-Distal3.266339.07182K562KHSRP
    chr1061500006150080+intron-Distal4.011124.30063K562U2AF2
    chr1061479236148007+intron-Distal,intron-Proximal3.636005.57254K562U2AF2
    chr1061460466146132+intron-Distal5.406866.12104HepG2QKI
    chr1061499726150057+intron-Distal3.381634.57751HepG2U2AF2
    chr1061561766156243+intron-Distal,intron-Proximal4.132514.76003K562KHSRP
    chr1061558656155929+intron-Distal,intron-Proximal3.197403.48890K562KHSRP
    chr1061311856131272+intron-Distal,intron-Proximal4.441684.66211HepG2XRN2
    chr1061381696138243+intron-Distal3.091045.10441K562HNRNPM
    chr1061336016133707+intron-Distal3.4264610.69947HepG2QKI
    chr1061484076148454+intron-Distal4.515953.85435K562PRPF8
    chr1061570416157128+intron-Distal,intron-Proximal3.182843.07751K562KHSRP
    chr1061311866131240+intron-Proximal3.432713.39477K562BUD13
    chr1061482406148291+intron-Proximal3.816623.02234K562KHSRP
    chr1061505606150647+intron-Proximal3.284866.11092K562TIA1
    chr1061506016150615+intron-Proximal3.614855.56719K562SF3B4
    chr1061554186155460+intron-Proximal3.834497.43453HepG2SF3A3
    chr1061311716131242+intron-Proximal4.792058.96810HepG2BUD13
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for RBM17 is not avaliable on ENCORE database.



    Diffrential Expression
    • 797 differentially expressed genes after Knockdown/Knockout RBM17 protein.  





    • 87 RBPs can affect the levels of RBM17.  







    797 differentially expressed genes after Knockdown/Knockout RBM17 protein :

    Only display 100 entries as example. Please click "View All" button to see all 797 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    DBNDD1ENSG00000003249.9840.43770308.891401.443905.276902.69940HepG2RBM17
    POLR2JENSG00000005075.111492.86040543.842801.456705.614302.94380HepG2RBM17
    USP2ENSG00000036672.11382.29590141.494301.433804.535302.14310HepG2RBM17
    RCN1ENSG00000049449.4851.062901999.58140-1.232404.400402.03100HepG2RBM17
    BCAR1ENSG00000050820.121553.28910706.963301.135503.775201.62950HepG2RBM17
    PCGF2ENSG00000056661.91977.58050847.327101.222604.324901.98960HepG2RBM17
    BCAT1ENSG00000060982.10882.005101972.44650-1.161103.941601.73290HepG2RBM17
    NGFRENSG00000064300.4288.4603074.903701.945203.300901.32510HepG2RBM17
    CTSAENSG00000064601.125264.128802404.809601.130203.909701.72530HepG2RBM17
    ROGDIENSG00000067836.8534.83950241.645401.146103.390701.36450HepG2RBM17
    PITX1ENSG00000069011.11182.6613069.470801.394603.473601.42050HepG2RBM17
    PPP2R2CENSG00000074211.990.24830307.24660-1.767405.763103.03590HepG2RBM17
    TCF7ENSG00000081059.15859.96350401.502901.098803.349601.34310HepG2RBM17
    HALENSG00000084110.6337.49310784.10200-1.216203.875101.70820HepG2RBM17
    TFENSG00000091513.1070727.33620154256.28560-1.125003.933301.73290HepG2RBM17
    SEMA4GENSG00000095539.117806.612703368.259001.212604.436202.05790HepG2RBM17
    TECRENSG00000099797.71553.38930571.901501.441505.642102.95360HepG2RBM17
    SRSF5ENSG00000100650.114771.633909684.36800-1.021203.316501.32540HepG2RBM17
    EEF1A2ENSG00000101210.6312.93620124.510801.329503.769401.62740HepG2RBM17
    SYPENSG00000102003.6317.94480128.760701.304003.735201.60250HepG2RBM17
    ACDENSG00000102977.9558.54860211.479501.401103.669101.55640HepG2RBM17
    MMP15ENSG00000102996.42074.61910820.962001.337403.925401.73290HepG2RBM17
    SLC38A7ENSG00000103042.4817.10630290.849601.490205.563702.91060HepG2RBM17
    BCKDKENSG00000103507.91014.56620429.837101.238904.223501.90820HepG2RBM17
    FGL1ENSG00000104760.126155.1080013709.65700-1.155304.104501.82670HepG2RBM17
    CLPTM1ENSG00000104853.112242.534101001.152101.163403.961001.73880HepG2RBM17
    CRTC1ENSG00000105662.11432.85080194.024201.157503.280701.31280HepG2RBM17
    ERFENSG00000105722.51597.29340688.043501.215003.400101.36990HepG2RBM17
    GSK3AENSG00000105723.71443.03780640.976001.170703.923301.73290HepG2RBM17
    ACTA2ENSG00000107796.82112.51810688.384101.617606.969703.95150HepG2RBM17
    DNAJC12ENSG00000108176.10197.08690481.03000-1.287304.007701.77090HepG2RBM17
    PSMD3ENSG00000108344.102294.823601113.581401.043103.341201.33980HepG2RBM17
    PNPOENSG00000108439.5967.06560435.125701.152103.706801.58890HepG2RBM17
    RNF167ENSG00000108523.111266.20550561.065301.174203.908301.72530HepG2RBM17
    RAB5CENSG00000108774.103573.617201625.442901.136503.926601.73290HepG2RBM17
    DPH1ENSG00000108963.13604.32730275.642001.132403.379701.36150HepG2RBM17
    TMEM104ENSG00000109066.9507.50190169.169801.584805.187602.64650HepG2RBM17
    DTX4ENSG00000110042.3192.9665069.497001.473203.830801.67430HepG2RBM17
    NUP107ENSG00000111581.5934.656301967.96700-1.074203.457601.41010HepG2RBM17
    PRKAB1ENSG00000111725.6636.79630266.549001.256304.078001.81680HepG2RBM17
    GMDSENSG00000112699.64301.962708947.61760-1.056503.534301.46370HepG2RBM17
    SLC29A1ENSG00000112759.121820.99030742.804701.293604.708902.27260HepG2RBM17
    STEAP3ENSG00000115107.15560.64100231.369501.276804.067701.81490HepG2RBM17
    SRMENSG00000116649.51071.73020510.465101.070003.305801.32540HepG2RBM17
    PLEKHM2ENSG00000116786.7829.55830388.546401.094203.326001.33270HepG2RBM17
    HSDL2ENSG00000119471.101179.654102441.74920-1.049603.338701.33980HepG2RBM17
    EGR1ENSG00000120738.7517.078801586.25280-1.617206.877503.87860HepG2RBM17
    UBIAD1ENSG00000120942.9612.97360254.483901.268204.053701.80700HepG2RBM17
    FAM35AENSG00000122376.7995.936002075.59300-1.059403.414901.37860HepG2RBM17
    NAA60ENSG00000122390.131438.04380684.246001.071403.340201.33980HepG2RBM17
    ZMIZ2ENSG00000122515.101273.64830534.860801.251604.348102.00450HepG2RBM17
    PIGTENSG00000124155.124745.922002070.087101.196904.274601.94740HepG2RBM17
    FOSBENSG00000125740.912.3060053.77840-2.127703.454601.40990HepG2RBM17
    PROZENSG00000126231.944.90310150.56110-1.745504.544802.14800HepG2RBM17
    GLIS2ENSG00000126603.467.6417016.918001.999303.500301.43850HepG2RBM17
    NUP214ENSG00000126883.122382.115801119.159001.089703.559701.47770HepG2RBM17
    EMC6ENSG00000127774.6399.34620131.106901.606805.283802.69940HepG2RBM17
    ATP6V1FENSG00000128524.4590.62660212.102101.477405.206002.65830HepG2RBM17
    HOXD1ENSG00000128645.1184.87460275.61250-1.699205.424802.81030HepG2RBM17
    CLN6ENSG00000128973.7212.9748045.294802.233204.675902.25480HepG2RBM17
    CD68ENSG00000129226.91082.35000474.188401.190503.944001.73290HepG2RBM17
    FAM155BENSG00000130054.4442.82740132.417601.741506.445903.51290HepG2RBM17
    SAT1ENSG00000130066.122100.080707648.81400-1.864809.242005.99530HepG2RBM17
    TOMM40ENSG00000130204.81170.50530508.748101.202003.354201.34380HepG2RBM17
    NINJ1ENSG00000131669.51159.70880385.472701.589006.442203.51290HepG2RBM17
    WBP2ENSG00000132471.72246.85170852.904301.397305.046302.53080HepG2RBM17
    REEP2ENSG00000132563.11288.3694097.867301.558904.595302.18410HepG2RBM17
    RBM38ENSG00000132819.121076.14190375.793101.517805.933803.14400HepG2RBM17
    HMGB1P5ENSG00000132967.9254.2415029.015803.1312012.998509.48300HepG2RBM17
    RBM17ENSG00000134453.11589.014202297.03040-1.963409.831106.51190HepG2RBM17
    FAM127AENSG00000134590.9379.43810145.682001.380904.265701.94250HepG2RBM17
    ATP5G2ENSG00000135390.131086.24670515.285201.075803.295801.32510HepG2RBM17
    ALDH1L2ENSG00000136010.934.19690116.64320-1.770204.155001.86250HepG2RBM17
    SMPD4ENSG00000136699.153741.492501510.696201.308304.996002.49270HepG2RBM17
    UBAP2ENSG00000137073.162698.374401220.535601.144503.887301.71420HepG2RBM17
    TMEM63BENSG00000137216.142442.551101177.236101.052903.375001.35880HepG2RBM17
    NRMENSG00000137404.10465.48440177.053801.394404.497502.11460HepG2RBM17
    SEMA7AENSG00000138623.5440.32550180.055301.290003.927001.73290HepG2RBM17
    FAM13AENSG00000138640.10499.175501050.55300-1.073503.294801.32510HepG2RBM17
    ARHGDIAENSG00000141522.73822.752001736.088801.138703.895401.71950HepG2RBM17
    SF3B4ENSG00000143368.91605.68610743.860101.110003.618201.51770HepG2RBM17
    ACTA1ENSG00000143632.10112.0297022.364002.324505.839303.09150HepG2RBM17
    POMGNT2ENSG00000144647.5436.75670196.475201.152403.270901.30550HepG2RBM17
    PLAC8ENSG00000145287.6330.455901147.97150-1.796605.147402.61930HepG2RBM17
    ARHGAP18ENSG00000146376.62989.524607093.89440-1.246704.615202.19910HepG2RBM17
    IGFBP1ENSG00000146678.514439.4575043697.15280-1.597507.111804.05230HepG2RBM17
    MRPS28ENSG00000147586.5306.41410719.55300-1.231604.000801.76730HepG2RBM17
    APIPENSG00000149089.8139.44500485.06720-1.798505.419502.81030HepG2RBM17
    DGKZENSG00000149091.111115.50280493.108101.177603.897601.71950HepG2RBM17
    SERPINH1ENSG00000149257.93146.180601448.824001.118603.751601.61370HepG2RBM17
    LAMTOR1ENSG00000149357.5773.28860293.680601.396704.907002.42150HepG2RBM17
    MTA2ENSG00000149480.21854.41710897.596201.046703.297901.32510HepG2RBM17
    MPP7ENSG00000150054.14309.75050664.05760-1.100203.305801.32540HepG2RBM17
    SLC7A11ENSG00000151012.9337.903301146.94840-1.763105.272902.69940HepG2RBM17
    NEK7ENSG00000151414.10158.84260477.76660-1.588705.620002.94380HepG2RBM17
    SCOCENSG00000153130.13632.457501352.74950-1.096903.426401.38800HepG2RBM17
    UBALD1ENSG00000153443.8424.05380183.738401.206503.550701.47340HepG2RBM17
    LONRF1ENSG00000154359.8339.87220850.51880-1.323404.508802.12130HepG2RBM17
    CNOT8ENSG00000155508.9910.740802057.81590-1.176003.959501.73880HepG2RBM17
    PRR14ENSG00000156858.7944.90520406.778401.215803.468101.41710HepG2RBM17
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    87 RBPs can affect the gene expression of RBM17 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    RBM17ENSG00000134453.111280.863701488.83480-0.217102.280301.71830HepG2ACO1
    RBM17ENSG00000134453.111236.572401495.81760-0.274602.527501.79060HepG2AKAP8L
    RBM17ENSG00000134453.11963.368301332.74720-0.468203.730202.82280HepG2ASCC1
    RBM17ENSG00000134453.111570.769301956.80240-0.317004.107203.30110HepG2AUH
    RBM17ENSG00000134453.11838.646001123.42320-0.421802.856601.94300HepG2BCLAF1
    RBM17ENSG00000134453.111041.419401689.25540-0.697809.644208.61320HepG2BOP1
    RBM17ENSG00000134453.111753.862102348.51510-0.421202.192601.33370HepG2CCAR1
    RBM17ENSG00000134453.111068.394101488.49660-0.478409.307908.22790HepG2CKAP4
    RBM17ENSG00000134453.111052.278801550.80860-0.559505.942404.96980HepG2CPSF6
    RBM17ENSG00000134453.111631.217901937.30480-0.248102.579701.95580HepG2CELF1
    RBM17ENSG00000134453.11938.724101542.96240-0.716907.952906.94230HepG2DDX3X
    RBM17ENSG00000134453.11918.384901271.19150-0.469003.226702.40080HepG2DDX55
    RBM17ENSG00000134453.11709.854501325.43180-0.9009010.223709.11740HepG2DDX6
    RBM17ENSG00000134453.111199.464801424.40770-0.248002.445401.80220HepG2DKC1
    RBM17ENSG00000134453.11615.149401105.49920-0.8457016.2797014.71010HepG2DNAJC21
    RBM17ENSG00000134453.11893.761901095.69140-0.293903.437902.72470HepG2DNAJC2
    RBM17ENSG00000134453.11762.956501086.61550-0.510203.361702.13190HepG2AGO1
    RBM17ENSG00000134453.11931.900601274.17450-0.451303.424502.76920HepG2EIF2S1
    RBM17ENSG00000134453.111738.893302055.07530-0.241002.810701.96790HepG2EIF4G1
    RBM17ENSG00000134453.11968.292701317.93160-0.444803.225202.50960HepG2G3BP1
    RBM17ENSG00000134453.11675.10900950.59270-0.493703.768402.70710HepG2GEMIN5
    RBM17ENSG00000134453.111155.993601757.90800-0.604705.861404.95420HepG2GPKOW
    RBM17ENSG00000134453.111206.823101421.40210-0.236102.362101.45310HepG2HDGF
    RBM17ENSG00000134453.111554.896301914.37610-0.300103.759402.69650HepG2HNRNPA2B1
    RBM17ENSG00000134453.111160.460601553.99030-0.421306.088705.08000HepG2HNRNPF
    RBM17ENSG00000134453.111392.468401897.43430-0.446409.398708.22750HepG2HNRNPL
    RBM17ENSG00000134453.111065.061801677.60890-0.655507.502206.52400HepG2HNRNPLL
    RBM17ENSG00000134453.111042.682801233.22170-0.242102.271501.71710HepG2HNRNPU
    RBM17ENSG00000134453.111109.287301530.24270-0.464105.381304.40470HepG2IGF2BP1
    RBM17ENSG00000134453.111060.547001360.97260-0.359805.496004.07420HepG2KIF1C
    RBM17ENSG00000134453.111109.058001462.83940-0.399402.780802.14680HepG2NCBP2
    RBM17ENSG00000134453.11468.328701167.29850-1.3176011.638109.31690HepG2NONO
    RBM17ENSG00000134453.11661.07780980.60890-0.568904.632603.61670HepG2PRPF8
    RBM17ENSG00000134453.111335.826101971.72700-0.561707.438506.52300HepG2PUF60
    RBM17ENSG00000134453.111708.229602093.09940-0.293104.976104.22790HepG2PUM1
    RBM17ENSG00000134453.111639.655002091.55550-0.351203.894803.10200HepG2PUM2
    RBM17ENSG00000134453.111169.784101516.47270-0.374505.742804.91410HepG2PUS1
    RBM17ENSG00000134453.11589.014202297.03040-1.963409.831106.51190HepG2RBM17
    RBM17ENSG00000134453.111359.171301877.78750-0.466307.038506.30150HepG2RBM22
    RBM17ENSG00000134453.111235.362801673.94150-0.438304.211803.39620HepG2RPLP0
    RBM17ENSG00000134453.11821.190201038.89200-0.339302.623502.02400HepG2RPS19
    RBM17ENSG00000134453.11674.24540970.02390-0.524703.720502.82640HepG2RRP9
    RBM17ENSG00000134453.11947.624202153.19270-1.184103.936902.14820HepG2SFPQ
    RBM17ENSG00000134453.111535.341701890.62830-0.300304.512503.65080HepG2SLBP
    RBM17ENSG00000134453.11957.588301289.89240-0.429802.482901.57920HepG2SMNDC1
    RBM17ENSG00000134453.111186.310701847.57530-0.639204.406903.41090HepG2SNRNP70
    RBM17ENSG00000134453.111820.465801423.637500.354605.355404.75210HepG2SRSF1
    RBM17ENSG00000134453.111314.477701946.82210-0.5666011.8107010.64350HepG2SRSF5
    RBM17ENSG00000134453.111034.424701526.72410-0.5616010.216409.02510HepG2SRSF7
    RBM17ENSG00000134453.111908.709302214.04840-0.214102.695602.07960HepG2SUCLG1
    RBM17ENSG00000134453.11966.014501214.99370-0.330802.539101.63740HepG2SUPT6H
    RBM17ENSG00000134453.11789.495701265.44790-0.680606.321405.36010HepG2SUPV3L1
    RBM17ENSG00000134453.111002.005601635.29350-0.706709.436308.21430HepG2TARDBP
    RBM17ENSG00000134453.11620.49150848.18310-0.451002.809201.80690HepG2TFIP11
    RBM17ENSG00000134453.11665.556401198.36240-0.8484015.0007014.00110HepG2TIAL1
    RBM17ENSG00000134453.11877.789901209.01360-0.461907.002006.17610HepG2TRIM56
    RBM17ENSG00000134453.111372.429801590.87320-0.213102.245401.60540HepG2UPF1
    RBM17ENSG00000134453.11893.458701133.27310-0.343004.390103.57490HepG2ZC3H8
    RBM17ENSG00000134453.111265.303201749.65390-0.4676010.314609.42690HepG2ZNF622
    RBM17ENSG00000134453.114078.484002830.219300.5270014.8730013.66600K562AGGF1
    RBM17ENSG00000134453.111894.479602309.37150-0.285704.240703.03470K562BCLAF1
    RBM17ENSG00000134453.112188.357402876.41470-0.394403.636002.63640K562BOP1
    RBM17ENSG00000134453.113335.002305002.34630-0.584903.578502.34150K562CNOT7
    RBM17ENSG00000134453.113467.470004158.12120-0.262003.642402.36680K562CPEB4
    RBM17ENSG00000134453.112227.633403058.52390-0.457306.456605.25860K562CPSF6
    RBM17ENSG00000134453.111448.106001752.00260-0.274802.686201.64490K562CSTF2
    RBM17ENSG00000134453.114946.968604302.535800.201302.777002.12470K562DDX47
    RBM17ENSG00000134453.113860.379503168.902500.284704.087702.99330K562DKC1
    RBM17ENSG00000134453.111615.143001985.77130-0.298002.112701.31420K562EFTUD2
    RBM17ENSG00000134453.112635.588403409.57280-0.371506.117005.11100K562EIF2S2
    RBM17ENSG00000134453.112365.597701829.462200.370705.191804.11740K562EIF3G
    RBM17ENSG00000134453.112326.791703111.84040-0.419404.317803.24960K562FMR1
    RBM17ENSG00000134453.112027.795702637.50680-0.379302.512901.64530K562FTO
    RBM17ENSG00000134453.112665.424201839.240500.5352011.1874010.05680K562FXR1
    RBM17ENSG00000134453.112099.865302920.19340-0.475805.958804.79490K562GPKOW
    RBM17ENSG00000134453.113761.245304543.73440-0.272702.590501.85740K562GRSF1
    RBM17ENSG00000134453.111776.074202338.76610-0.397102.535001.96050K562HNRNPC
    RBM17ENSG00000134453.113814.109803125.304800.287202.999302.13860K562KIF1C
    RBM17ENSG00000134453.114526.617803501.140000.370504.844903.57690K562MBNL1
    RBM17ENSG00000134453.112186.343702850.41110-0.382604.144103.05930K562METAP2
    RBM17ENSG00000134453.113399.874902454.051400.470202.090601.34650K562NAA15
    RBM17ENSG00000134453.111299.977801956.76130-0.590006.229604.13290K562NONO
    RBM17ENSG00000134453.112754.863403373.36310-0.292207.089105.97490K562NSUN2
    RBM17ENSG00000134453.111927.910102477.83510-0.362002.749101.92110K562PCBP3
    RBM17ENSG00000134453.111582.844401900.61220-0.263902.210801.49480K562POLR2G
    RBM17ENSG00000134453.111581.045702096.83220-0.407302.300001.48140K562PSIP1
    RBM17ENSG00000134453.114140.488802920.487900.503506.245305.46870K562PUS1
    RBM17ENSG00000134453.113627.912302845.686900.350305.281004.48530K562RBM15
    RBM17ENSG00000134453.111366.495004308.66160-1.6568069.2661064.86380K562RBM17
    RBM17ENSG00000134453.111348.965401912.52540-0.503604.359503.11440K562RCC2
    RBM17ENSG00000134453.112694.649503328.58780-0.304804.435003.42110K562SF3A3
    RBM17ENSG00000134453.111406.126803796.89590-1.433105.583803.43620K562SFPQ
    RBM17ENSG00000134453.111223.568201813.08120-0.567303.779802.52630K562SRFBP1
    RBM17ENSG00000134453.112521.341802130.465300.242902.133601.50340K562SRSF1
    RBM17ENSG00000134453.111325.990501870.89790-0.496704.263302.97840K562SUPV3L1
    RBM17ENSG00000134453.112445.745101906.324600.359404.207903.18980K562SYNCRIP
    RBM17ENSG00000134453.111759.227602156.17970-0.293502.150401.52170K562TARDBP
    RBM17ENSG00000134453.111222.737902016.87000-0.722006.166004.71350K562TIAL1
    RBM17ENSG00000134453.111397.003502142.03620-0.616605.567204.11380K562TRIM56
    RBM17ENSG00000134453.111519.499001980.14950-0.382003.117702.03220K562UCHL5
    RBM17ENSG00000134453.112630.288703576.84520-0.4435010.529109.24130K562UPF1
    RBM17ENSG00000134453.112558.691203060.59870-0.258402.376701.56340K562WDR3
    RBM17ENSG00000134453.113762.971403182.631300.241602.867502.00570K562WDR43
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for RBM17 is not available on ENCORE database.





    2 RBPs can affect the splicing of RBM17 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SERBM17ENSG00000134453.11chr10+6154989615503161541726154324615547061555440.068000.000420.04948includedHepG2TAF15
    A3SSRBM17ENSG00000134453.11chr10+615741561577296157491615772961572016157274-0.067000.000300.01454shorterK562U2AF2

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for RBM17 is not avaliable on ENCORE database.