DPH1

General Information

Gene Name       : DPH1
Gene ID             : ENSG00000108963.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DPH1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DPH1ENSG00000108963.174.4610.927.69ENCSR000AEF
HepG2DPH1ENSG00000108963.1724.2313.7318.98ENCSR985KAT
K562DPH1ENSG00000108963.1722.3719.3120.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DPH1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DPH1 RNA is bound by 26 proteins.  







eCLIP assay for DPH1 is not avaliable on ENCORE database.





26 proteins are bound to DPH1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1719451671945196+3'-UTR,5'-UTR,intron-Proximal4.149868.65427K562AQR
chr1719451601945237+3'-UTR,5'-UTR,intron-Proximal3.419623.88924K562PRPF8
chr1719435651943684+3'-UTR,CDS,intron-Proximal4.234824.89208K562AQR
chr1719464411946506+3'-UTR3.156683.75706HepG2LSM11
chr1719464011946484+3'-UTR4.249264.49605HepG2UPF1
chr1719401571940236+3'-UTR,CDS4.238326.64430HepG2PPIG
chr1719459471946027+3'-UTR,CDS,intron-Distal3.150823.21309HepG2GRWD1
chr1719436211943664+3'-UTR,CDS4.133983.28461K562BUD13
chr1719444231944475+3'-UTR,CDS4.590124.97342HepG2PPIG
chr1719448151944905+3'-UTR,CDS4.5356910.48252HepG2PPIG
chr1719459621946021+3'-UTR,CDS,intron-Distal4.491214.34093HepG2RBM15
chr1719453371945387+3'-UTR,5'-UTR,CDS,intron-Distal4.266234.66990HepG2DDX3X
chr1719452161945259+3'-UTR,5'-UTR,intron-Proximal4.739114.48002K562AQR
chr1719464071946505+3'-UTR3.145335.56979K562YBX3
chr1719458401945931+3'-UTR,CDS,intron-Distal,intron-Proximal3.2030811.35884HepG2BUD13
chr1719458661945933+3'-UTR,CDS,intron-Distal,intron-Proximal5.721839.95272K562AQR
chr1719430261943118+3'-UTR,CDS,intron-Proximal3.557984.25142K562BUD13
chr1719452021945258+3'-UTR,5'-UTR,intron-Proximal3.568743.33087HepG2RBM22
chr1719436251943672+3'-UTR,CDS,intron-Proximal3.280786.98138HepG2PRPF8
chr1719460741946193+3'-UTR,CDS,intron-Distal,intron-Proximal4.390104.92727HepG2AKAP1
chr1719458411945900+3'-UTR,CDS,intron-Distal,intron-Proximal4.761918.05832K562SF3B4
chr1719436111943672+3'-UTR,CDS,intron-Proximal3.922564.57180HepG2AQR
chr1719451961945216+3'-UTR,5'-UTR,intron-Proximal4.5183411.31344K562AQR
chr1719448161944877+3'-UTR,CDS4.246413.60441HepG2GRWD1
chr1719456091945726+3'-UTR,intron-Distal,intron-Proximal4.6152213.53114HepG2PCBP2
chr1719459511946012+3'-UTR,CDS,intron-Distal3.090154.38249K562RBM15
chr1719455721945609+3'-UTR,intron-Distal,intron-Proximal4.243623.78681HepG2PCBP2
chr1719460671946136+3'-UTR,CDS,intron-Distal4.179744.20997HepG2UPF1
chr1719454341945486+3'-UTR,5'-UTR,CDS,intron-Distal3.535183.53770HepG2DDX3X
chr1719455641945763+3'-UTR,intron-Distal,intron-Proximal3.680479.80262HepG2HNRNPK
chr1719460551946116+3'-UTR,CDS,intron-Distal5.182679.03040K562RBM15
chr1719461521946224+3'-UTR,CDS,intron-Distal,intron-Proximal4.212114.22893K562RBM15
chr1719464131946501+3'-UTR3.091323.20150HepG2AKAP1
chr1719462961946391+3'-UTR,CDS3.174133.18660HepG2PABPN1
chr1719334401933538+5'-UTR,CDS,intron-Proximal4.111104.25489HepG2NCBP2
chr1719397211939812+5'-UTR,CDS,intron-Distal,intron-Proximal3.663464.09623HepG2SF3B4
chr1719368991936953+5'-UTR,CDS,intron-Proximal3.492517.09278HepG2PPIG
chr1719431061943161+CDS,intron-Proximal3.230266.93483HepG2PRPF8
chr1719393421939394+CDS,intron-Distal,intron-Proximal5.283959.35884HepG2PPIG
chr1719392611939332+CDS,intron-Distal,intron-Proximal4.313738.68543HepG2PPIG
chr1719376381937719+intron-Distal4.690566.64314K562CSTF2T
chr1719374141937455+intron-Distal4.303584.10564HepG2CSTF2T
chr1719386911938746+intron-Distal4.077713.96304K562CSTF2T
chr1719404041940557+intron-Distal4.347374.61288HepG2PRPF4
chr1719389831939085+intron-Distal3.949443.70701HepG2PRPF4
chr1719384021938458+intron-Distal,intron-Proximal3.463886.59225HepG2CSTF2T
chr1719375921937634+intron-Distal3.906333.14687K562CSTF2T
chr1719375881937637+intron-Distal5.138935.11777HepG2DDX59
chr1719381691938229+intron-Distal4.035333.81649K562ILF3
chr1719392051939261+intron-Distal,intron-Proximal5.038504.40745K562SF3B4
chr1719375181937632+intron-Distal3.590167.97368K562ILF3
chr1719372211937346+intron-Distal,intron-Proximal4.419623.89565K562PRPF8
chr1719389631939080+intron-Distal3.591504.77785K562RBFOX2
chr1719376451937714+intron-Distal4.308788.19675HepG2CSTF2T
chr1719389871939065+intron-Distal4.059388.19675HepG2CSTF2T
chr1719374881937600+intron-Distal3.998123.30705HepG2GTF2F1
chr1719381241938185+intron-Distal4.623365.67757HepG2CSTF2T
chr1719387961938862+intron-Distal4.707546.08348HepG2CSTF2T
chr1719391751939216+intron-Distal,intron-Proximal3.997563.44758HepG2CSTF2T
chr1719386891938762+intron-Distal4.737343.77360K562GTF2F1
chr1719383781938446+intron-Distal,intron-Proximal3.944415.47084HepG2DDX59
chr1719381111938235+intron-Distal4.565678.55897HepG2PCBP2
chr1719446281944708+intron-Distal,intron-Proximal4.480789.07264HepG2XPO5
chr1719375061937546+intron-Distal3.434114.60046HepG2CSTF2T
chr1719375291937631+intron-Distal5.252926.57498HepG2PCBP2
chr1719383331938471+intron-Distal,intron-Proximal4.933028.15853K562ILF3
chr1719375361937592+intron-Distal3.266563.62708K562CSTF2T
chr1719383471938402+intron-Distal,intron-Proximal4.209249.31613HepG2CSTF2T
chr1719383581938429+intron-Distal,intron-Proximal4.756675.63094K562GTF2F1
chr1719376371937673+intron-Distal3.656213.67675HepG2DDX59
chr1719376311937703+intron-Distal3.941715.00478HepG2PCBP2
chr1719388041938870+intron-Distal5.018456.14086K562GTF2F1
chr1719375511937612+intron-Distal3.505114.84557HepG2CSTF2T
chr1719388051938885+intron-Distal4.245333.71802K562RBFOX2
chr1719381171938218+intron-Distal4.403854.83379HepG2HNRNPK
chr1719407991940922+intron-Distal4.365804.36307HepG2HNRNPK
chr1719376321937711+intron-Distal4.668235.63094K562GTF2F1
chr1719389841939076+intron-Distal4.351865.40707K562CSTF2T
chr1719386791938732+intron-Distal5.041234.38825K562DROSHA
chr1719376341937709+intron-Distal3.776875.22214K562ILF3
chr1719383431938401+intron-Distal,intron-Proximal4.335774.75311K562CSTF2T
chr1719375231937632+intron-Distal5.406458.83340K562GTF2F1
chr1719387901938868+intron-Distal3.587786.14554K562DROSHA
chr1719381361938232+intron-Distal5.605378.45545HepG2DDX59
chr1719400731940127+intron-Proximal4.357983.98427HepG2SF3B4
chr1719402621940336+intron-Proximal4.554027.03763K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DPH1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DPH1 is not available on ENCORE database.

  • 73 RBPs can affect the levels of DPH1.  








The Knockdown/knockout RNA-Seq assay for DPH1 is not available on ENCORE database.





73 RBPs can affect the gene expression of DPH1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DPH1ENSG00000108963.13862.86670661.515100.383302.254301.39940HepG2ABCF1
DPH1ENSG00000108963.13596.45050471.988300.337602.543401.80470HepG2AKAP8L
DPH1ENSG00000108963.13570.04810337.818900.754705.052803.78410HepG2BCCIP
DPH1ENSG00000108963.13681.92640440.820800.629305.440804.63600HepG2BOP1
DPH1ENSG00000108963.13816.81970469.680800.7982014.8627013.57650HepG2CKAP4
DPH1ENSG00000108963.13550.74890434.477100.342002.888902.03820HepG2DDX19B
DPH1ENSG00000108963.13494.09390317.855300.636305.795304.17860HepG2DDX1
DPH1ENSG00000108963.13727.79060520.026400.484803.072902.41870HepG2DDX3X
DPH1ENSG00000108963.13446.78150300.611800.571604.019202.85160HepG2DHX30
DPH1ENSG00000108963.13454.99640311.666200.545803.461502.68120HepG2DNAJC21
DPH1ENSG00000108963.13464.51660308.957000.588206.142905.22760HepG2DNAJC2
DPH1ENSG00000108963.13639.81420474.499900.431102.251301.67300HepG2EIF4A3
DPH1ENSG00000108963.13346.73990459.06090-0.404802.447101.66150HepG2EWSR1
DPH1ENSG00000108963.13665.32690405.406300.714602.515901.54920HepG2FTO
DPH1ENSG00000108963.13624.89840411.231600.603605.150804.08810HepG2FUBP3
DPH1ENSG00000108963.13595.19340444.199600.422102.278901.67170HepG2G3BP1
DPH1ENSG00000108963.13842.63010458.701900.877208.628207.54020HepG2GPKOW
DPH1ENSG00000108963.13645.36340421.814100.613403.483002.23010HepG2GRSF1
DPH1ENSG00000108963.13624.90200448.504600.478404.903803.64090HepG2HDGF
DPH1ENSG00000108963.13638.41110480.922800.408603.599402.79040HepG2HNRNPF
DPH1ENSG00000108963.13653.75020450.062300.538503.834003.02290HepG2HNRNPK
DPH1ENSG00000108963.13559.37530465.602300.264601.978001.39630HepG2HNRNPL
DPH1ENSG00000108963.13640.78770437.751100.549603.798703.07130HepG2HNRNPLL
DPH1ENSG00000108963.13517.56690347.691900.573805.665704.82270HepG2HNRNPU
DPH1ENSG00000108963.13610.29540473.570600.365802.407001.72990HepG2IGF2BP1
DPH1ENSG00000108963.13507.46020355.153300.514802.322701.64400HepG2ILF2
DPH1ENSG00000108963.13575.22800429.437500.421604.006002.78360HepG2KIF1C
DPH1ENSG00000108963.13972.31330481.784501.0129011.172309.96550HepG2MATR3
DPH1ENSG00000108963.13783.33820493.104100.667604.221003.44450HepG2NCBP2
DPH1ENSG00000108963.13687.04760506.862400.438703.991703.07590HepG2NOL12
DPH1ENSG00000108963.13498.35710305.005400.708202.668501.59570HepG2NONO
DPH1ENSG00000108963.13454.07120344.137600.399802.733001.89010HepG2PARN
DPH1ENSG00000108963.13621.04610429.790100.531005.592304.77630HepG2PCBP1
DPH1ENSG00000108963.13476.67340310.110900.620103.847302.99150HepG2PPIL4
DPH1ENSG00000108963.13743.82150483.862400.620306.272205.42330HepG2PUF60
DPH1ENSG00000108963.13678.19830513.662300.400804.510403.79330HepG2PUM1
DPH1ENSG00000108963.13602.85140478.495300.333202.702002.09100HepG2PUS1
DPH1ENSG00000108963.13623.09570473.615400.395602.927902.28820HepG2QKI
DPH1ENSG00000108963.13604.32730275.642001.132403.379701.36150HepG2RBM17
DPH1ENSG00000108963.13597.45760453.333900.398203.238602.57830HepG2RECQL
DPH1ENSG00000108963.13436.59470309.301700.497203.140002.49090HepG2RPS19
DPH1ENSG00000108963.13432.42190309.626600.481803.845903.10780HepG2SAFB2
DPH1ENSG00000108963.13532.86570266.352301.000302.815601.44950HepG2SF1
DPH1ENSG00000108963.131018.27880553.668700.878907.464106.32010HepG2SF3A3
DPH1ENSG00000108963.13601.40830455.299200.401403.280802.64310HepG2SF3B4
DPH1ENSG00000108963.13559.66900463.991600.270402.013501.39740HepG2SLBP
DPH1ENSG00000108963.13569.08630353.205800.688004.489003.24590HepG2SMNDC1
DPH1ENSG00000108963.13536.38790857.64330-0.6771010.553809.74580HepG2SRFBP1
DPH1ENSG00000108963.13669.77530477.768800.487305.320904.49390HepG2SRSF5
DPH1ENSG00000108963.13710.90000543.333200.387704.060303.33200HepG2SUCLG1
DPH1ENSG00000108963.13539.60070392.507000.459103.472002.53970HepG2TIA1
DPH1ENSG00000108963.13662.59320337.794100.9719013.8441012.87330HepG2TIAL1
DPH1ENSG00000108963.13548.67670340.871200.686608.143907.25710HepG2TRIM56
DPH1ENSG00000108963.13667.65060276.903801.269604.318203.07420HepG2U2AF2
DPH1ENSG00000108963.13327.93280195.321100.747504.756303.75530HepG2UCHL5
DPH1ENSG00000108963.13685.42380504.697200.441504.139002.88940HepG2UTP18
DPH1ENSG00000108963.13742.84470474.059800.647908.433407.47900HepG2UTP3
DPH1ENSG00000108963.13286.51350536.88790-0.9060012.9041011.62880HepG2ZC3H8
DPH1ENSG00000108963.13780.06720540.027300.530507.425606.64190HepG2ZNF622
DPH1ENSG00000108963.13659.29910442.331400.575704.770603.90580K562AKAP8L
DPH1ENSG00000108963.13487.54380694.07350-0.509603.531102.88400K562AQR
DPH1ENSG00000108963.13841.72780701.659800.262502.026601.45390K562DDX47
DPH1ENSG00000108963.13288.66160187.047700.625903.733102.81860K562EIF3G
DPH1ENSG00000108963.1372.44920172.53340-1.251806.249205.09050K562G3BP2
DPH1ENSG00000108963.13268.59520402.16170-0.582303.781403.09670K562HNRNPC
DPH1ENSG00000108963.13347.87020244.586100.508103.051102.16800K562MAGOH
DPH1ENSG00000108963.13426.80500244.085600.806107.352405.75720K562MATR3
DPH1ENSG00000108963.13523.27920368.604100.505402.444101.62680K562NAA15
DPH1ENSG00000108963.13570.38480360.607900.661405.306403.99930K562PSIP1
DPH1ENSG00000108963.13378.19780237.632900.670305.000704.13160K562PTBP1
DPH1ENSG00000108963.13630.57920438.687700.523403.508102.90760K562PUS1
DPH1ENSG00000108963.13728.41430498.052800.548404.680603.26620K562SAFB
DPH1ENSG00000108963.13464.69010312.003700.574603.796702.53900K562SRFBP1
DPH1ENSG00000108963.13329.11240235.766500.481102.436101.76980K562TARDBP
DPH1ENSG00000108963.13367.76590227.425200.693305.083903.92350K562TIA1
DPH1ENSG00000108963.13560.35810368.609400.604204.396303.14260K562TRIM56
DPH1ENSG00000108963.13655.89510854.98410-0.382403.138001.78150K562TROVE2
DPH1ENSG00000108963.13541.44380698.06360-0.366503.229602.45650K562UPF1
DPH1ENSG00000108963.13456.78810597.30850-0.387002.593501.74380K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DPH1 is not available on ENCORE database.





15 RBPs can affect the splicing of DPH1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSDPH1ENSG00000108963.13chr17+1944396194452419443961944475194477419449150.415000.000000.00012longerHepG2TAF15
A5SSDPH1ENSG00000108963.13chr17+1939822193998019398221939947194012819402500.269000.000250.02894longerK562FXR1
A5SSDPH1ENSG00000108963.13chr17+1939822193998019398221939947194012819402500.237000.000070.02213longerK562DROSHA
A5SSDPH1ENSG00000108963.13chr17+193982219399801939822193994719401281940250-0.247000.000170.02659shorterHepG2QKI
RIDPH1ENSG00000108963.13chr17+1945061194671819450611945169194589819467180.355000.003650.02376includedK562PUS1
RIDPH1ENSG00000108963.13chr17+1939263193998019392631939385193982219399800.070000.000640.02645includedK562SF3B1
RIDPH1ENSG00000108963.13chr17+1939263193998019392631939385193982219399800.131000.000000.00007includedHepG2U2AF2
RIDPH1ENSG00000108963.13chr17+194506119467181945061194516919458981946718-0.474000.001200.09146excludedK562UCHL5
RIDPH1ENSG00000108963.13chr17+1939263193998019392631939385193982219399800.108000.003530.03423includedHepG2U2AF1
RIDPH1ENSG00000108963.13chr17+1943511194389919435111943668194379819438990.237000.000020.00101includedHepG2G3BP1
RIDPH1ENSG00000108963.13chr17+1943511194389919435111943668194379819438990.160000.001570.03266includedHepG2KHSRP
RIDPH1ENSG00000108963.13chr17+1939263193998019392631939385193982219399800.117000.005340.05363includedHepG2NCBP2
RIDPH1ENSG00000108963.13chr17+1939263193998019392631939385193982219399800.153000.000870.01195includedHepG2HNRNPK
RIDPH1ENSG00000108963.13chr17+1943511194389919435111943668194379819438990.155000.001880.02256includedHepG2HNRNPK
RIDPH1ENSG00000108963.13chr17+1945061194671819450611945169194589819467180.363000.000660.06201includedK562PUM1
RIDPH1ENSG00000108963.13chr17+1945061194671819450611945169194589819467180.416000.002670.01635includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DPH1 is not avaliable on ENCORE database.