U2AF2

General Information

Gene Name       : U2AF2
Gene ID             : ENSG00000063244.12
Essential Gene : Yes

Functions

Localization(RBPImage: U2AF2)

Domains (AlphaFold: U2AF2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878U2AF2ENSG00000063244.1232.1595.9164.03ENCSR000AEF
HepG2U2AF2ENSG00000063244.12193.0783.49138.28ENCSR985KAT
K562U2AF2ENSG00000063244.12161.74113.78137.76ENCSR000AEO

Assays

5 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 242ENCSR893RAVU2AF2K562ReleasedENCAB511TCTENCSR871RTL  
eCLIPeCLIP: 272ENCSR202BFNU2AF2HepG2ReleasedENCAB511TCTENCSR049GND  
knockdown followed by RNA-seq U2AF2-BGKLV08-K562ENCSR904CJQU2AF2K562ReleasedENCSR344XID   shRNAKD% = 80.7,85.4
knockdown followed by RNA-seq U2AF2-BGHLV14-HepG2ENCSR622MCXU2AF2HepG2ReleasedENCSR491FOC   shRNAKD% = 77.8,63.4
knockdown followed by RNA-seq U2AF2-BGHLV26-HepG2ENCSR426UUGU2AF2HepG2ReleasedENCSR104ABF   shRNAKD% = 90.7,93.5






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
U2AF2242K562ENCSR893RAVENCSR871RTLENCAB511TCTA303-665A1ReleasedENCODE3
U2AF2272HepG2ENCSR202BFNENCSR049GNDENCAB511TCTA303-665A1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
U2AF2ENCAB511TCTA303-665A1Released, ENCODE3Released, ENCODE3BGHLV14-65, Released, ENCODE3BGKLV08-63, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
U2AF2K562shRNAENCSR904CJQENCSR344XIDU2AF2-LV08-63,U2AF2-LV08-64Nontarget-LV08-1_00003531,nontarget-LV08-2_0000353180.7,85.4ReleasedENCODE3
U2AF2HepG2shRNABGHLV12-91,BGHLV12-92BGHLV12-1,BGHLV12-2NotSatisfiedENCODE3
U2AF2HepG2shRNAENCSR622MCXENCSR491FOCU2AF2_BGHLV14-65,U2AF2_BGHLV14-66NT_BGHLV14-1,NT_BGHLV14-277.8,63.4ReleasedENCODE3
U2AF2HepG2shRNAENCSR426UUGENCSR104ABFU2AF2_BGHLV26_63,U2AF2_BGHLV26_64non-target_BGHLV26-1,non-target_BGHLV26-290.7,93.5ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    U2AF2: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Speckles
  • Variable Nuclear Intensity
  • Cytoplasm
  • Cytosolic
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    U2AF2Product_ID: A303-665A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: U2AF2-human    		 HepG2_Bethyl_A303-665A_1_U2AF2.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using U2AF2 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-U2AF2 antibody (lanes under 'U2AF2').
    		 U2AF2-LV26-HepG2.png<br>Caption: Western blot following shRNA against U2AF2 in HepG2 whole cell lysate using U2AF2 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNA against U2AF2.U2AF2 protein appears as the green band, GAPDH serves as a control and appears in red.
    		 K562_Bethyl_A303-665A_1_U2AF2.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using U2AF2 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-U2AF2 antibody (lanes under 'U2AF2').
    		 U2AF2_Secondary_Western.png<br>Caption: Western blot following shRNA against U2AF2 in K562 and HepG2 whole cell lysate using U2AF2 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against U2AF2. Lanes 5-8 follow the same pattern, but in HepG2. U2AF2 protein appears as the green band, GAPDH serves as a control and appears in red.








    RNA Targets
    • U2AF2 protein binds to 14,077 RNA regions.  





    Proteins bound to RNA
    • U2AF2 RNA is bound by 60 proteins.  






    U2AF2 protein has 14,077 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 14,077 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    U2AF2chr83056737930567430-5.2994418.56966HepG2GSR3'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr10106025644106025705+3.198125.97392HepG2GSTO1intron-Distal
    U2AF2chr137989537779895438-3.955415.60471HepG2RBM26intron-Distal
    U2AF2chr165653633156536385-3.309095.58362HepG2BBS23'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr185639026756390316+4.713266.44495HepG2MALT1CDS,intron-Proximal
    U2AF2chr5132224809132224956-3.040374.43994HepG2AFF4CDS,intron-Distal,intron-Proximal
    U2AF2chr34264298742643033+3.408865.19836HepG2NKTRintron-Distal
    U2AF2chr122656883626568880-5.309097.71913HepG2ITPR2intron-Distal
    U2AF2chr165025876350258821+3.185135.12776HepG2PAPD5CDS,intron-Proximal
    U2AF2chr102197065421970664+3.357183.80334HepG2MLLT10intron-Distal
    U2AF2chr137335245973352532-3.930873.58455K562DIS35'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr118691705286917119+3.157903.80334HepG2TMEM135intron-Distal
    U2AF2chr2159326375159326458+3.247893.42396HepG2PKP4intron-Distal
    U2AF2chr224572646445726536+5.7454632.67939K562FAM118A5'-UTR,CDS,intron-Proximal
    U2AF2chr203432998534329993-3.7973417.22032K562RBM395'-UTR,intron-Distal,intron-Proximal
    U2AF2chr3195686914195686968-3.0197810.98928HepG2SDHAP1intron-Distal
    U2AF2chr67126940571269484+3.140034.43994HepG2FAM135A3'-UTR,CDS,intron-Proximal
    U2AF2chr76336724063367283+4.769256.53595K562RP11-340I6.8intron-Distal
    U2AF2chr1737260603726129-3.481644.97118HepG2C17orf85intron-Distal
    U2AF2chr137596846675968533-4.020055.18845HepG2TBC1D4intron-Distal
    U2AF2chr201064361310643708-3.686345.36861HepG2JAG1intron-Distal
    U2AF2chr2179482908179483026+3.457296.75956HepG2TTN-AS1intron-Distal
    U2AF2chr2242545943242546029-3.950388.55689HepG2THAP4intron-Distal,intron-Proximal
    U2AF2chr78679229486792342+4.113038.64802HepG2DMTF15'-UTR,intron-Distal
    U2AF2chr175791710057917126+4.7637173.56141HepG2VMP1intron-Proximal
    U2AF2chr3140680934140681032+5.423738.61026HepG2SLC25A36intron-Distal
    U2AF2chr174854828848548400+3.5403711.53298HepG2ACSF23'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr174905226349052321-3.490849.99495HepG2SPAG93'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr53697096536971023+4.392644.20763HepG2NIPBLCDS,intron-Proximal
    U2AF2chr10126454112126454183-4.371863.35169HepG2METTL10, RP11-12J10.33'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr205724253457242615+3.882957.79697K562STX16, STX16-NPEPL13'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr72340118023401237-3.955889.59205HepG2IGF2BP33'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr2081807528180795+3.651574.50744HepG2PLCB1intron-Distal
    U2AF2chr178052860680528668+3.846095.18845HepG2FOXK2intron-Distal
    U2AF2chr1781353188135369-4.306955.11295K562CTC1CDS,intron-Distal
    U2AF2chr2120813494120813561+3.706665.36861HepG2EPB41L5intron-Distal
    U2AF2chr107009888270098923+3.432517.43659HepG2HNRNPH3CDS,intron-Proximal
    U2AF2chr3152173286152173343+4.5590512.90217HepG2MBNL1CDS,intron-Distal,intron-Proximal
    U2AF2chr157222617672226244-4.706664.79708HepG2MYO9Aintron-Distal
    U2AF2chr143262875032628874+5.423738.61026HepG2ARHGAP53'-UTR
    U2AF2chr168218490182184972-3.589159.59587HepG2MPHOSPH63'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr168985146489851504-4.002534.70109K562FANCAintron-Distal,intron-Proximal
    U2AF2chr63316277133162854-3.815803.00614K562RXRB3'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr2220099475220099524+4.119134.70109K562ANKZF1intron-Proximal
    U2AF2chr173745982137459891-4.108827.96049HepG2FBXL20CDS,intron-Distal,intron-Proximal
    U2AF2chr12622935426229437-3.295943.68342K562STMN1intron-Distal
    U2AF2chr81741578917415864+3.122366.31188HepG2SLC7A2CDS,intron-Proximal
    U2AF2chr6126359458126359536+3.549507.96049HepG2TRMT11intron-Distal
    U2AF2chr4106180764106180815+4.242863.12827HepG2TET23'-UTR,CDS,intron-Proximal
    U2AF2chr27130265871302716+3.077973.46866HepG2NAGK3'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr34267161642671662+4.6778824.18603HepG2NKTRintron-Distal
    U2AF2chrX4491822944918272+4.627569.44509HepG2KDM6ACDS,intron-Proximal
    U2AF2chr125790991857909962+3.584448.80785K562MARS3'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr2210896159210896233+3.6688813.74275HepG2AC007038.7intron-Proximal
    U2AF2chr26151041461510463-3.942144.36528HepG2USP34intron-Distal,intron-Proximal
    U2AF2chr6158914583158914633+3.616374.65237HepG2TULP4CDS,intron-Proximal
    U2AF2chr386817228681768-3.715889.59205HepG2SSUH23'-UTR,intron-Distal,intron-Proximal
    U2AF2chr206129956461299635+4.4934928.31712HepG2SLCO4A13'-UTR,intron-Distal,intron-Proximal
    U2AF2chr167076532870765373-3.282663.76090HepG2VAC14intron-Distal,intron-Proximal
    U2AF2chr222919233929192398-3.8850930.39039HepG2XBP1intron-Distal
    U2AF2chr57811018978110231-4.247893.45799HepG2ARSBintron-Distal
    U2AF2chr125814098258141030+3.206663.76090HepG2TSPAN313'-UTR,CDS,intron-Proximal
    U2AF2chr1171504551171504616+3.145665.59474K562PRRC2CCDS,intron-Proximal
    U2AF2chr48376361783763651-3.6590013.85543K562SEC31ACDS,intron-Distal,intron-Proximal
    U2AF2chr204757611247576189+3.782665.36861HepG2ARFGEF2intron-Distal
    U2AF2chr22125382821253838-3.7349510.98856HepG2APOBintron-Distal
    U2AF2chr1910427261042787+4.466597.31646HepG2ABCA7CDS,intron-Proximal
    U2AF2chr10103919924103920025+4.984866.15877HepG2NOLC13'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr10102721607102721696+3.047816.18258HepG2FAM178A3'-UTR,CDS,intron-Proximal
    U2AF2chr159354313293543181+3.701343.16095HepG2CHD2intron-Distal
    U2AF2chr3110863446110863496+4.995605.51162HepG2PVRL3intron-Distal
    U2AF2chr137587858075878623-3.031413.46866HepG2TBC1D4intron-Distal
    U2AF2chr168980558489805628+3.503844.95320HepG2ZNF2763'-UTR
    U2AF2chr83054685730546895-3.359093.32861HepG2GSRintron-Distal,intron-Proximal
    U2AF2chr153443959134439640-4.871865.81672HepG2KATNBL1CDS,intron-Distal,intron-Proximal
    U2AF2chr145030014050300241-3.2838512.14822HepG2NEMFCDS,intron-Distal,intron-Proximal
    U2AF2chr2186653625186653690-3.217198.53603HepG2AC008174.3intron-Distal,intron-Proximal
    U2AF2chr168739729987397341-4.9383046.51930HepG2FBXO31intron-Distal
    U2AF2chr957103995710452+3.777345.09028HepG2KIAA1432intron-Distal
    U2AF2chr73040721130407264+4.823166.56329K562ZNRF23'-UTR,intron-Distal
    U2AF2chr57306528373065381+5.160116.83215HepG2ARHGEF28intron-Distal
    U2AF2chr79167252891672621+3.291625.19836HepG2AKAP9intron-Distal
    U2AF2chr5145651033145651105+4.305633.79000HepG2RBM27CDS,intron-Proximal
    U2AF2chr154462108744621165+4.651574.64001HepG2CASC4intron-Distal
    U2AF2chr640648684064918+4.4448119.62278HepG2PRPF4B3'-UTR,intron-Distal
    U2AF2chr135299773352997785-4.185133.45799HepG2VPS36CDS,intron-Distal,intron-Proximal
    U2AF2chr2160470510160470557-4.174113.77802HepG2BAZ2Bintron-Distal
    U2AF2chr111372333013723425+3.797993.39716K562FAR1intron-Distal
    U2AF2chrX7051753870517566+3.399894.65237HepG2NONOintron-Distal
    U2AF2chr2190647572190647648-4.1091245.74912HepG2ORMDL15'-UTR,intron-Distal,intron-Proximal
    U2AF2chr11126134163126134184-4.326134.89971K562SRPRCDS,intron-Distal,intron-Proximal
    U2AF2chr124880062488060+4.869748.98750HepG2TNFRSF145'-UTR,intron-Distal,intron-Proximal
    U2AF2chr6167347375167347427-4.786894.79708HepG2RP11-514O12.4, RNASET2intron-Distal
    U2AF2chr166720113667201190+3.103473.75792K562HSF4intron-Proximal
    U2AF2chr214689477046894848+3.435098.80115HepG2COL18A1intron-Distal
    U2AF2chr157491482274914893+3.823895.09028HepG2CLK33'-UTR,CDS,intron-Distal,intron-Proximal
    U2AF2chr142394503023945085+4.553613.77802HepG2NGDNintron-Distal,intron-Proximal
    U2AF2chr7127230101127230147+3.560864.65237HepG2ARF5CDS,intron-Proximal
    U2AF2chr2135932888135932941+4.507059.44509HepG2RAB3GAP13'-UTR,intron-Proximal
    U2AF2chr6167419409167419507+3.739983.06676K562FGFR1OP, RP11-517H2.6intron-Distal




    60 proteins are bound to U2AF2 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr195618561456185670+3'-UTR3.081546.64396HepG2PABPN1
    chr195617158456171594+3'-UTR,CDS,intron-Proximal5.6336537.98659K562AQR
    chr195617059456170632+3'-UTR,CDS3.805213.37921HepG2UCHL5
    chr195618589156185949+3'-UTR3.4712113.76053HepG2PCBP2
    chr195618018256180196+3'-UTR,intron-Proximal4.3293023.23805K562AQR
    chr195618568856185746+3'-UTR3.039985.93170HepG2XRN2
    chr195618593656186019+3'-UTR4.0370917.34527HepG2UPF1
    chr195618016156180195+3'-UTR,intron-Proximal3.805054.80460HepG2AQR
    chr195617188156171894+3'-UTR,CDS,intron-Proximal3.369139.87510K562DDX24
    chr195617058556170707+3'-UTR,CDS4.3017314.06281K562SRSF1
    chr195617330256173346+3'-UTR,intron-Distal4.9912811.02443K562PTBP1
    chr195617254556172605+3'-UTR,CDS,intron-Proximal3.0473420.41554HepG2PRPF8
    chr195617993256179951+3'-UTR,CDS4.043459.86479HepG2PPIG
    chr195617071056170758+3'-UTR,CDS,intron-Proximal3.8401416.97964HepG2PRPF8
    chr195618006556180144+3'-UTR,CDS3.402357.71672HepG2PABPN1
    chr195618576656185811+3'-UTR3.865806.08987HepG2HNRNPK
    chr195617058356170662+3'-UTR,CDS3.4772013.81163HepG2GRWD1
    chr195618595956186038+3'-UTR3.4452744.14976K562FAM120A
    chr195618569756185741+3'-UTR3.986587.20767HepG2GTF2F1
    chr195618561056185679+3'-UTR3.5877719.77188K562AKAP8L
    chr195617313656173177+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.585677.15738HepG2U2AF2
    chr195617198456171991+3'-UTR,CDS,intron-Proximal5.4815130.37721K562AQR
    chr195618576656185815+3'-UTR4.5102526.23043HepG2PCBP2
    chr195618560156185696+3'-UTR5.2043583.01041K562GTF2F1
    chr195618568156185725+3'-UTR3.185157.55985HepG2FAM120A
    chr195618570656185740+3'-UTR3.656437.48701K562DDX6
    chr195618003656180039+3'-UTR,CDS3.614036.41974HepG2PPIG
    chr195617987256179910+3'-UTR,CDS,intron-Proximal3.2424311.69999HepG2PPIG
    chr195617328956173348+3'-UTR,intron-Distal,intron-Proximal3.908055.47635HepG2PCBP1
    chr195618595756186025+3'-UTR3.4209023.85752HepG2PCBP2
    chr195618560756185672+3'-UTR5.4456132.90752K562DDX55
    chr195618560856185679+3'-UTR4.1462663.23174K562FAM120A
    chr195618561556185675+3'-UTR3.8307236.50661K562PABPC4
    chr195617329656173368+3'-UTR,intron-Distal,intron-Proximal5.8832464.05789HepG2PCBP2
    chr195618595856186038+3'-UTR3.1181125.82088K562PABPC4
    chr195617319456173216+3'-UTR,5'-UTR,intron-Distal,intron-Proximal6.0141010.09256HepG2PRPF8
    chr195618560756185673+3'-UTR4.4138719.74316HepG2GTF2F1
    chr195618560356185661+3'-UTR3.980837.98691HepG2PCBP2
    chr195618561356185679+3'-UTR4.384937.38794HepG2G3BP1
    chr195617071056170715+3'-UTR,CDS,intron-Proximal3.069245.85044HepG2AQR
    chr195617991756179932+3'-UTR,CDS4.420889.56105HepG2PPIG
    chr195617052956170595+3'-UTR,CDS,intron-Proximal3.330026.39733HepG2AQR
    chr195618015756180161+3'-UTR,CDS,intron-Proximal3.295273.83179HepG2AQR
    chr195617330556173338+3'-UTR,intron-Distal3.958025.75237K562PCBP1
    chr195617198456172001+3'-UTR,CDS,intron-Proximal3.6572913.28834HepG2PRPF8
    chr195617188056171972+3'-UTR,CDS,intron-Proximal3.133736.76286HepG2G3BP1
    chr195618016656180206+3'-UTR,intron-Proximal3.7398634.14490HepG2PRPF8
    chr195617151956171559+3'-UTR,CDS,intron-Proximal5.0535416.36304K562AQR
    chr195618577756185817+3'-UTR3.300274.14151K562PCBP1
    chr195618016356180182+3'-UTR,intron-Proximal3.9308020.17288K562AQR
    chr195617329456173345+3'-UTR,intron-Distal,intron-Proximal3.8570911.26544HepG2HNRNPK
    chr195618570456185756+3'-UTR3.2541910.60066K562DDX55
    chr195617329856173345+3'-UTR,intron-Distal,intron-Proximal3.135385.30521K562HNRNPK
    chr195617052056170608+3'-UTR,CDS,intron-Proximal3.6617819.64401HepG2BUD13
    chr195617186056171887+3'-UTR,CDS,intron-Proximal3.7076016.69454K562AQR
    chr195618560456185676+3'-UTR4.0214734.08004HepG2FAM120A
    chr195618577556185821+3'-UTR4.0101827.96577K562UPF1
    chr195617058156170711+3'-UTR,CDS3.061969.43775HepG2SRSF1
    chr195618022556180317+3'-UTR,intron-Distal,intron-Proximal3.086559.23337HepG2RBFOX2
    chr195617238256172423+3'-UTR,CDS,intron-Proximal3.9366012.13872K562PRPF8
    chr195618013856180173+3'-UTR,CDS,intron-Proximal3.282329.68144HepG2PPIG
    chr195618560956185678+3'-UTR3.7684735.97400K562UPF1
    chr195618561056185689+3'-UTR3.0160513.50416K562FASTKD2
    chr195618560656185672+3'-UTR3.8455317.70198HepG2PRPF4
    chr195617190956171974+3'-UTR,CDS4.1969118.11376HepG2GRWD1
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    chr195617586256175935+intron-Distal3.804706.25630K562HNRNPM
    chr195618249256182549+intron-Distal4.774316.81643K562MTPAP
    chr195617262656172677+intron-Distal,intron-Proximal4.9425053.17211HepG2DDX59
    chr195618227456182339+intron-Distal5.126946.16154K562MTPAP
    chr195618178656181841+intron-Distal5.4735362.36818K562RBFOX2
    chr195617345856173488+intron-Distal3.430093.62729K562HNRNPK
    chr195617101756171143+intron-Distal5.429799.40930K562MATR3
    chr195618202056182084+intron-Distal4.9300112.38345HepG2RBFOX2
    chr195618240656182498+intron-Distal4.502434.51377K562HNRNPM
    chr195618226156182337+intron-Distal4.066694.02846K562HNRNPM
    chr195618179356181842+intron-Distal4.50544400.00000K562DROSHA
    chr195617205156172118+intron-Distal,intron-Proximal4.431177.43035HepG2EFTUD2
    chr195617301356173047+intron-Distal,intron-Proximal4.6951524.01462HepG2HNRNPK
    chr195617204756172086+intron-Distal,intron-Proximal6.0490841.24730K562AQR
    chr195617306156173107+intron-Distal,intron-Proximal5.4471236.61126HepG2HNRNPK
    chr195618228156182388+intron-Distal4.3151912.14828HepG2DROSHA
    chr195616658356166697+intron-Distal,intron-Proximal4.8326320.84476HepG2EFTUD2
    chr195616872456168768+intron-Distal3.876985.99692K562HNRNPM
    chr195617300856173118+intron-Distal,intron-Proximal5.2702829.69341K562HNRNPK
    chr195618184056181892+intron-Distal5.23355400.00000K562MTPAP
    chr195617089656170977+intron-Distal3.761105.72424K562MATR3
    chr195617274556172795+intron-Distal3.149113.57155HepG2ILF3
    chr195617046656170513+intron-Distal,intron-Proximal3.769476.29348HepG2HNRNPK
    chr195618180056181888+intron-Distal3.9276431.34806HepG2PCBP2
    chr195617205156172122+intron-Distal,intron-Proximal5.4131518.70163K562PRPF8
    chr195617742656177485+intron-Distal3.231844.92335K562NONO
    chr195618178256181841+intron-Distal5.35989400.00000HepG2DROSHA
    chr195618276856182820+intron-Distal4.210123.77360K562GTF2F1
    chr195617089656170963+intron-Distal4.772564.07628HepG2PTBP1
    chr195617271756172806+intron-Distal4.8048434.59688HepG2HNRNPK
    chr195618291856182962+intron-Distal3.249685.81579HepG2RBFOX2
    chr195617354356173643+intron-Distal4.8195840.30001K562PTBP1
    chr195616974956169848+intron-Distal4.5732214.72672K562HNRNPM
    chr195618210856182160+intron-Distal,intron-Proximal5.019033.62726K562DROSHA
    chr195617301056173054+intron-Distal,intron-Proximal6.3174775.94520HepG2DDX59
    chr195617353856173668+intron-Distal3.874668.38505K562MATR3
    chr195617071556170750+intron-Proximal5.723839.24583HepG2AQR
    chr195617179856171872+intron-Proximal4.030618.48964K562SF3B4
    chr195617184256171860+intron-Proximal3.9741913.63842K562AQR
    chr195617199156172025+intron-Proximal6.6677338.92605K562AQR
    chr195617257356172594+intron-Proximal4.430476.24305HepG2AQR
    chr195617378656173803+intron-Proximal4.454103.58835K562HNRNPK
    chr195616654256166560+intron-Proximal4.837698.30573K562AQR
    chr195618056856180600+intron-Proximal3.348593.27165HepG2RBFOX2
    chr195617162756171637+intron-Proximal5.369399.42242HepG2PCBP2
    chr195617511656175134+intron-Proximal4.133946.95612HepG2PRPF8
    chr195618035156180432+intron-Proximal3.427769.13246HepG2SF3B4
    chr195617261056172622+intron-Proximal4.275638.29266K562AQR
    chr195617381056173863+intron-Proximal6.7931327.20815HepG2HNRNPK
    chr195617982356179862+intron-Proximal3.569205.47851K562SF3B4
    chr195617159756171632+intron-Proximal4.3396710.95071HepG2PRPF8
    chr195617257056172620+intron-Proximal5.2239937.28752HepG2HNRNPK
    chr195617071456170752+intron-Proximal6.8226445.69981K562AQR
    chr195617201656172024+intron-Proximal5.353018.52745HepG2AQR
    chr195617179856171840+intron-Proximal3.707416.62272HepG2EFTUD2
    chr195617163156171669+intron-Proximal4.5339328.29536K562AQR
    chr195617076356170784+intron-Proximal6.5723814.81397K562AQR
    chr195617379356173857+intron-Proximal4.383447.30107HepG2PCBP1
    chr195617075256170763+intron-Proximal6.4194414.27141K562AQR
    chr195617515456175201+intron-Proximal3.898384.83721K562EFTUD2
    chr195617202656172047+intron-Proximal5.6214027.49803K562AQR
    chr195617377756173835+intron-Proximal4.3879110.90686K562SF3B4
    chr195617198556172016+intron-Proximal5.578209.96618HepG2AQR
    chr195617200156172031+intron-Proximal4.9377818.79924HepG2PRPF8
    chr195617159456171631+intron-Proximal5.1968154.58298K562AQR
    chr195617258856172650+intron-Proximal3.8568710.31296HepG2RBM22
    chr195617255856172651+intron-Proximal4.3887820.89832K562PCBP1
    chr195617255556172560+intron-Proximal4.3376913.09382K562AQR
    chr195617513956175200+intron-Proximal5.013648.53713HepG2RBM22
    chr195617071156170714+intron-Proximal6.4051735.24192K562AQR
    chr195617257456172626+intron-Proximal4.1950924.65699HepG2DDX59
    chr195616652056166536+intron-Proximal4.760147.92018K562AQR
    chr195617256056172600+intron-Proximal4.6345720.31277K562AQR
    chr195617378256173810+intron-Proximal4.6646424.50485HepG2HNRNPK
    chr195617380156173843+intron-Proximal3.852456.13981HepG2CSTF2T
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    The U2AF2 protein binds to its own RNA.

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    U2AF2chr195617313656173177+3.585677.15738HepG2U2AF23'-UTR,5'-UTR,intron-Distal,intron-Proximal
    U2AF2chr195617384156173903+4.1249115.96646HepG2U2AF25'-UTR,CDS,intron-Proximal


    Diffrential Expression
    • 8,048 differentially expressed genes after Knockdown/Knockout U2AF2 protein.  





    • 93 RBPs can affect the levels of U2AF2.  







    8,048 differentially expressed genes after Knockdown/Knockout U2AF2 protein :

    Only display 100 entries as example. Please click "View All" button to see all 8,048 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    TSPAN6ENSG00000000003.10684.058901210.60140-0.823502.306901.41650HepG2U2AF2
    DPM1ENSG00000000419.8684.840002289.37420-1.741108.262106.47280HepG2U2AF2
    C1orf112ENSG00000000460.1270.60530227.91430-1.690605.079203.71660HepG2U2AF2
    SEMA3FENSG00000001617.71003.85070357.192601.490705.934404.43930HepG2U2AF2
    ANKIB1ENSG00000001629.5677.241601269.25470-0.906202.646501.68040HepG2U2AF2
    LASP1ENSG00000002834.139945.238105398.757400.881302.740701.75610HepG2U2AF2
    DBNDD1ENSG00000003249.9734.50260310.311401.243004.240703.00660HepG2U2AF2
    SLC7A2ENSG00000003989.122296.248405418.55390-1.238604.709303.39740HepG2U2AF2
    PLXND1ENSG00000004399.83059.934901330.119101.201804.474703.20600HepG2U2AF2
    KDM1AENSG00000004487.111892.437704040.17600-1.094203.818402.64790HepG2U2AF2
    RBM6ENSG00000004534.102681.692605629.62880-1.069903.753202.59450HepG2U2AF2
    RECQLENSG00000004700.11417.68510790.63380-0.920602.556401.60890HepG2U2AF2
    SLC25A13ENSG00000004864.9961.870901749.35420-0.862902.475701.54930HepG2U2AF2
    ST7ENSG00000004866.141367.79580554.766701.301804.821803.49350HepG2U2AF2
    POLR2JENSG00000005075.111345.99940547.145401.298603.832102.65910HepG2U2AF2
    LIG3ENSG00000005156.7562.914901118.34660-0.990403.045302.00810HepG2U2AF2
    FAM214BENSG00000005238.15290.7125087.257201.736105.761204.28740HepG2U2AF2
    CREBBPENSG00000005339.83842.897701844.403201.058903.702302.55360HepG2U2AF2
    GCFC2ENSG00000005436.9308.50150622.92500-1.013802.893101.88160HepG2U2AF2
    CROTENSG00000005469.7504.33940214.268301.234903.803302.63550HepG2U2AF2
    ABCB4ENSG00000005471.11411.14110765.02190-0.895902.441201.52190HepG2U2AF2
    RHBDD2ENSG00000005486.12834.65320229.762901.860907.370705.67990HepG2U2AF2
    GDE1ENSG00000006007.73647.669602049.422300.831702.447201.52600HepG2U2AF2
    MAP3K14ENSG00000006062.9127.2892057.581701.144302.218201.34540HepG2U2AF2
    CX3CL1ENSG00000006210.62947.410101078.304001.450606.176104.63810HepG2U2AF2
    TNFRSF12AENSG00000006327.91108.19290124.602403.1527019.9198017.10360HepG2U2AF2
    MAP3K9ENSG00000006432.111547.29270574.987701.428005.721004.25460HepG2U2AF2
    BAIAP2L1ENSG00000006453.91735.05270929.608800.900202.665401.69660HepG2U2AF2
    COX10ENSG00000006695.6519.89980257.084001.015902.900101.88660HepG2U2AF2
    PAX6ENSG00000007372.16103.3327018.302502.497106.041004.52830HepG2U2AF2
    RHBDF1ENSG00000007384.11676.82030205.695501.718207.049705.40070HepG2U2AF2
    MYLIPENSG00000007944.10267.46020110.797501.271303.448702.34410HepG2U2AF2
    E2F2ENSG00000007968.652.02780149.17370-1.519602.629201.66770HepG2U2AF2
    CDKL5ENSG00000008086.6247.71030119.914901.046502.479501.55180HepG2U2AF2
    CDK11AENSG00000008128.183046.062801591.530100.936402.840901.83860HepG2U2AF2
    CYTH3ENSG00000008256.11448.09750231.879000.950302.458001.53470HepG2U2AF2
    SPAG9ENSG00000008294.161627.624003651.73440-1.165804.221702.99060HepG2U2AF2
    CELSR3ENSG00000008300.101504.08650519.128701.534606.477104.88930HepG2U2AF2
    AASSENSG00000008311.10360.77270817.35210-1.179903.884502.70460HepG2U2AF2
    IL32ENSG00000008517.123668.813001871.546000.971003.130302.07950HepG2U2AF2
    RPS20ENSG00000008988.55507.5776012407.68450-1.171704.408503.15260HepG2U2AF2
    NCAPD2ENSG00000010292.8581.355702640.12760-2.183109.146107.24350HepG2U2AF2
    PHF7ENSG00000010318.1537.04820113.70430-1.617803.383302.28800HepG2U2AF2
    IDSENSG00000010404.132719.02260868.108901.647007.688605.95760HepG2U2AF2
    LRRC23ENSG00000010626.1019.8717086.80950-2.127104.459903.19400HepG2U2AF2
    FYNENSG00000010810.131204.33510675.830800.833402.280801.39660HepG2U2AF2
    CLCN6ENSG00000011021.171888.106201094.434200.786702.200701.33230HepG2U2AF2
    ABHD5ENSG00000011198.3196.4898049.902201.977206.095804.57160HepG2U2AF2
    AKAP8LENSG00000011243.132697.494401385.673800.960902.980501.95340HepG2U2AF2
    MBTD1ENSG00000011258.11635.473701614.27010-1.345002.521101.58270HepG2U2AF2
    UTP18ENSG00000011260.9397.81350831.47100-1.063603.269402.19610HepG2U2AF2
    PTBP1ENSG00000011304.125805.770403339.932800.797602.331301.43370HepG2U2AF2
    DPF1ENSG00000011332.15121.8071047.268701.365502.772901.78240HepG2U2AF2
    SYT7ENSG00000011347.573.74990232.02630-1.653604.836103.50430HepG2U2AF2
    PLAURENSG00000011422.7127.2967040.707401.644703.757002.59800HepG2U2AF2
    ANLNENSG00000011426.6814.569604403.94730-2.434706.100204.57530HepG2U2AF2
    WIZENSG00000011451.13737.71080275.514401.420805.230703.84010HepG2U2AF2
    BRCA1ENSG00000012048.15432.750701689.52070-1.965003.069402.02830HepG2U2AF2
    PRICKLE3ENSG00000012211.8239.43760116.153601.043502.385501.47830HepG2U2AF2
    NR1H4ENSG00000012504.9390.930501092.13010-1.482205.898504.40800HepG2U2AF2
    PSMC4ENSG00000013275.31620.85740874.323400.890402.635401.67220HepG2U2AF2
    MVPENSG00000013364.14989.85620340.455901.539706.217604.67060HepG2U2AF2
    PGM3ENSG00000013375.111188.810402198.20850-0.886802.303001.41370HepG2U2AF2
    GPRC5AENSG00000013588.5312.2099042.592802.8737012.8157010.60760HepG2U2AF2
    TACC3ENSG00000013810.14315.067901576.74670-2.323207.421105.72440HepG2U2AF2
    POLA2ENSG00000014138.447.92800247.29610-2.367308.879707.01240HepG2U2AF2
    ZC3H3ENSG00000014164.6270.35400114.570501.238503.347002.25880HepG2U2AF2
    CAPN1ENSG00000014216.112263.41260866.058801.385905.607804.15590HepG2U2AF2
    MDH1ENSG00000014641.13835.978901893.84620-1.179804.196402.96790HepG2U2AF2
    SLC30A9ENSG00000014824.9771.441901479.91480-0.939902.816101.81730HepG2U2AF2
    MTMR11ENSG00000014914.15115.5835040.095001.527302.990501.96090HepG2U2AF2
    GLT8D1ENSG00000016864.12427.414901011.36650-1.242604.368203.11660HepG2U2AF2
    ATP2C1ENSG00000017260.15865.945501737.99280-1.005103.222302.15730HepG2U2AF2
    SLC38A5ENSG00000017483.101526.19250533.084701.517406.368504.79470HepG2U2AF2
    PHLDB1ENSG00000019144.121992.58090395.723802.3320013.4910011.23580HepG2U2AF2
    CYP24A1ENSG00000019186.5435.98180198.238801.136903.342502.25580HepG2U2AF2
    PRDM11ENSG00000019485.8101.9355030.822601.725503.531902.41210HepG2U2AF2
    CD74ENSG00000019582.103707.391901049.959801.820009.246407.32870HepG2U2AF2
    NCDNENSG00000020129.11201.9830096.403601.067002.404201.49310HepG2U2AF2
    MRE11AENSG00000020922.8333.68650898.28240-1.428705.515504.07990HepG2U2AF2
    SERPINB1ENSG00000021355.8707.255101439.73450-1.025503.241502.17230HepG2U2AF2
    CPS1ENSG00000021826.10903.070601603.28280-0.828102.306001.41600HepG2U2AF2
    RNF10ENSG00000022840.11874.684801566.78250-0.841002.308601.41780HepG2U2AF2
    DERAENSG00000023697.8401.68850719.95830-0.841802.210601.33930HepG2U2AF2
    PLEKHO1ENSG00000023902.9468.27830138.802601.754206.727505.11630HepG2U2AF2
    DEPDC1ENSG00000024526.12115.141401051.34140-3.1908017.6978015.06300HepG2U2AF2
    PHF20ENSG00000025293.11273.20440876.00540-1.681007.081305.42900HepG2U2AF2
    TYMPENSG00000025708.862.7634016.961601.887603.044802.00780HepG2U2AF2
    TOMM34ENSG00000025772.72485.62550837.301801.569707.086005.43280HepG2U2AF2
    FASENSG00000026103.15757.96790247.606201.614006.367804.79460HepG2U2AF2
    CD44ENSG00000026508.12133.453006.084704.454905.732104.26320HepG2U2AF2
    MIPEPENSG00000027001.7111.62410311.53610-1.480804.495303.22330HepG2U2AF2
    IFNGR1ENSG00000027697.82660.220301242.299901.098403.824802.65380HepG2U2AF2
    VRK2ENSG00000028116.12503.57530277.368800.860302.192801.32670HepG2U2AF2
    BCLAF1ENSG00000029363.113984.991007116.58150-0.836602.483601.55520HepG2U2AF2
    HMGB3ENSG00000029993.10745.425101802.95370-1.274204.817303.49020HepG2U2AF2
    NUP160ENSG00000030066.9979.234801823.20950-0.896802.610901.65460HepG2U2AF2
    BAK1ENSG00000030110.8575.81970151.458401.926603.623402.49100HepG2U2AF2
    CENPQENSG00000031691.6132.22240259.87440-0.974802.281601.39700HepG2U2AF2
    ARID4AENSG00000032219.141017.608701828.09470-0.845202.454501.53190HepG2U2AF2
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    93 RBPs can affect the gene expression of U2AF2 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    U2AF2ENSG00000063244.81118.075101615.64640-0.531104.046402.77470HepG2AATF
    U2AF2ENSG00000063244.81823.558502424.17520-0.410702.471901.48550HepG2AKAP8
    U2AF2ENSG00000063244.82987.673103790.60960-0.343406.054505.10110HepG2AUH
    U2AF2ENSG00000063244.81467.195302125.01250-0.534404.565303.60560HepG2CALR
    U2AF2ENSG00000063244.81949.086402863.52020-0.555006.919105.87000HepG2CPSF6
    U2AF2ENSG00000063244.81085.359901654.82540-0.608504.245902.42990HepG2CSTF2T
    U2AF2ENSG00000063244.81158.041801744.15240-0.590808.403706.82600HepG2DDX24
    U2AF2ENSG00000063244.81827.811003251.76590-0.831105.929404.51920HepG2DDX59
    U2AF2ENSG00000063244.82091.331702608.24900-0.318704.890404.03760HepG2DKC1
    U2AF2ENSG00000063244.83339.812402364.039400.498403.478502.71030HepG2EIF4B
    U2AF2ENSG00000063244.82423.716802926.74640-0.272103.465402.54480HepG2EIF4G1
    U2AF2ENSG00000063244.82199.519802803.59450-0.350102.944702.10580HepG2EIF4G2
    U2AF2ENSG00000063244.83722.000904352.39660-0.225703.138002.50430HepG2ETF1
    U2AF2ENSG00000063244.83464.294802663.933400.378904.438303.38540HepG2EWSR1
    U2AF2ENSG00000063244.81248.611401529.45280-0.292702.698301.54710HepG2FAM120A
    U2AF2ENSG00000063244.81337.560001697.98550-0.344202.514501.41980HepG2FASTKD2
    U2AF2ENSG00000063244.82715.742403435.56550-0.339202.287101.58410HepG2FIP1L1
    U2AF2ENSG00000063244.81897.763202868.60650-0.596102.298901.38080HepG2FTO
    U2AF2ENSG00000063244.83281.541702450.049100.421503.781502.98190HepG2FXR1
    U2AF2ENSG00000063244.81936.259103245.78870-0.745309.599708.45520HepG2GPKOW
    U2AF2ENSG00000063244.82014.740802726.31740-0.436402.765001.83040HepG2HNRNPA2B1
    U2AF2ENSG00000063244.84275.315702301.911000.8931017.5730015.96990HepG2HNRNPK
    U2AF2ENSG00000063244.81902.466703097.53710-0.7033010.039108.92520HepG2HNRNPLL
    U2AF2ENSG00000063244.81600.007602323.41880-0.538204.151502.90140HepG2KHSRP
    U2AF2ENSG00000063244.82186.790302492.06280-0.188502.518001.54240HepG2KIF1C
    U2AF2ENSG00000063244.82107.510302780.23330-0.399704.744803.70530HepG2MSI2
    U2AF2ENSG00000063244.82130.685103159.59810-0.568403.899102.73550HepG2MTPAP
    U2AF2ENSG00000063244.81913.351402746.72940-0.521606.215605.12160HepG2NSUN2
    U2AF2ENSG00000063244.81772.488702245.96430-0.341602.447901.76530HepG2PABPC4
    U2AF2ENSG00000063244.81800.968502088.07640-0.213402.272801.49850HepG2PARN
    U2AF2ENSG00000063244.82931.519602190.530200.420306.911106.02170HepG2PCBP1
    U2AF2ENSG00000063244.81624.035301881.57610-0.212401.929401.30580HepG2PPIL4
    U2AF2ENSG00000063244.82009.975702292.97040-0.190001.961801.30260HepG2PRPF4
    U2AF2ENSG00000063244.82209.562002807.96550-0.345803.382002.73210HepG2PUF60
    U2AF2ENSG00000063244.84321.161402980.865900.5356021.7464020.40710HepG2PUM1
    U2AF2ENSG00000063244.82290.952102776.84040-0.277504.523003.77200HepG2PUS1
    U2AF2ENSG00000063244.82424.115303404.40270-0.489903.943302.94040HepG2RBM15
    U2AF2ENSG00000063244.83189.906803637.74190-0.189501.799901.35870HepG2RBM22
    U2AF2ENSG00000063244.82219.136001686.032700.396302.607401.58020HepG2RCC2
    U2AF2ENSG00000063244.82408.290603187.26720-0.404304.145503.33670HepG2RPLP0
    U2AF2ENSG00000063244.84399.784303350.889600.392802.306001.69020HepG2SF3A3
    U2AF2ENSG00000063244.82662.708502190.786700.281305.303404.46220HepG2SMN1
    U2AF2ENSG00000063244.81269.372603411.30470-1.4262020.0385018.00270HepG2SNRNP70
    U2AF2ENSG00000063244.83241.078302772.560600.225203.221602.55470HepG2SRSF5
    U2AF2ENSG00000063244.82632.281303567.06090-0.438409.735708.88780HepG2SSB
    U2AF2ENSG00000063244.81254.962902391.33020-0.930205.714104.79620HepG2SUPV3L1
    U2AF2ENSG00000063244.81428.072702177.45220-0.608606.419205.62570HepG2TAF15
    U2AF2ENSG00000063244.81912.885903019.76180-0.658709.438308.21570HepG2TARDBP
    U2AF2ENSG00000063244.81582.796702000.49820-0.337903.294202.38640HepG2TIA1
    U2AF2ENSG00000063244.81606.725702049.69570-0.351303.998203.42030HepG2TIAL1
    U2AF2ENSG00000063244.83362.610602743.404700.293502.059001.31640HepG2TUFM
    U2AF2ENSG00000063244.86166.435402938.738501.0691025.0586023.10860HepG2U2AF1
    U2AF2ENSG00000063244.82288.014002971.72320-0.377207.704506.63380HepG2UPF1
    U2AF2ENSG00000063244.81748.162402262.91530-0.372307.476806.46170HepG2ZC3H8
    U2AF2ENSG00000063244.82705.198403268.33170-0.272805.523204.81900HepG2ZNF622
    U2AF2ENSG00000063244.87200.820204223.688700.7696035.4728033.50550K562AGGF1
    U2AF2ENSG00000063244.85618.157404641.380900.275402.653601.69670K562AKAP8
    U2AF2ENSG00000063244.87564.727504394.985200.783307.807506.65840K562AKAP8L
    U2AF2ENSG00000063244.86037.995404611.483700.388706.493005.01430K562ATP5C1
    U2AF2ENSG00000063244.82906.867903934.63820-0.436804.552803.42230K562BOP1
    U2AF2ENSG00000063244.84142.214105054.18680-0.287103.228401.58910K562CEBPZ
    U2AF2ENSG00000063244.82983.116704183.63380-0.487907.733706.41310K562CPSF6
    U2AF2ENSG00000063244.85633.388404729.032800.252403.755902.71320K562DKC1
    U2AF2ENSG00000063244.85283.034406123.27210-0.212902.739202.02340K562EIF2S2
    U2AF2ENSG00000063244.84871.024303482.093600.484202.461501.49210K562EIF3D
    U2AF2ENSG00000063244.82405.324501694.363300.505408.777107.36220K562EIF3G
    U2AF2ENSG00000063244.83482.685102959.251400.234902.542901.45290K562EIF4B
    U2AF2ENSG00000063244.83390.247602868.370800.241102.536501.30300K562EWSR1
    U2AF2ENSG00000063244.81393.787401812.67880-0.379103.446701.64570K562FASTKD2
    U2AF2ENSG00000063244.82665.906203681.55940-0.465704.554003.04270K562FKBP4
    U2AF2ENSG00000063244.82777.261404256.77820-0.616109.046607.45370K562FMR1
    U2AF2ENSG00000063244.82460.758803608.01650-0.552106.053204.64490K562FTO
    U2AF2ENSG00000063244.85058.724303417.331500.5658014.9958013.70000K562FXR1
    U2AF2ENSG00000063244.8413.701101542.87260-1.8990013.7421011.91050K562G3BP2
    U2AF2ENSG00000063244.83016.908603994.32830-0.404904.699803.66930K562GPKOW
    U2AF2ENSG00000063244.83299.864204239.07980-0.361304.371803.63810K562HNRNPC
    U2AF2ENSG00000063244.83633.809102529.543700.522505.280003.53360K562HNRNPK
    U2AF2ENSG00000063244.85507.612306448.74550-0.227602.704601.82230K562HNRNPU
    U2AF2ENSG00000063244.84731.023405947.94080-0.330203.171902.32360K562HSPD1
    U2AF2ENSG00000063244.83884.475302534.131100.616103.921302.61250K562IGF2BP2
    U2AF2ENSG00000063244.86453.935204664.017800.468506.967605.51560K562KIF1C
    U2AF2ENSG00000063244.82224.772403410.69080-0.616405.537304.16010K562KRR1
    U2AF2ENSG00000063244.83761.453402662.098500.498606.974005.61340K562MAGOH
    U2AF2ENSG00000063244.85490.163004464.742400.298202.486601.48490K562MAK16
    U2AF2ENSG00000063244.83341.964902656.519500.331103.586802.52380K562MATR3
    U2AF2ENSG00000063244.87191.994805224.900400.460907.447305.81260K562MBNL1
    U2AF2ENSG00000063244.86766.354708924.74440-0.399404.766603.28220K562MSI2
    U2AF2ENSG00000063244.85515.029603662.290800.590505.509804.11250K562NAA15
    U2AF2ENSG00000063244.85608.796406620.88130-0.239306.722505.62690K562NSUN2
    U2AF2ENSG00000063244.86252.386004079.959100.615803.047401.99910K562PABPN1
    U2AF2ENSG00000063244.83663.112602602.747400.492907.710005.37410K562PCBP1
    U2AF2ENSG00000063244.83159.418702368.394200.415604.344003.11310K562PCBP2
    U2AF2ENSG00000063244.84006.594606065.41120-0.598207.171305.83250K562PCBP3
    U2AF2ENSG00000063244.87230.561508603.56610-0.250802.937701.45500K562PNPT1
    U2AF2ENSG00000063244.83367.398504652.28130-0.466307.743206.42810K562POLR2G
    U2AF2ENSG00000063244.84347.953403165.977600.457602.973902.19740K562PRPF8
    U2AF2ENSG00000063244.83449.651002586.483100.415405.519604.60880K562PTBP1
    U2AF2ENSG00000063244.87013.041409135.54840-0.381504.159703.16610K562PUF60
    U2AF2ENSG00000063244.88317.958909717.48510-0.224402.529801.51070K562PUM1
    U2AF2ENSG00000063244.88205.764109520.80720-0.214402.927001.94140K562PUM2
    U2AF2ENSG00000063244.88356.568004358.293400.9390020.7073019.25340K562PUS1
    U2AF2ENSG00000063244.87054.978604246.770500.7322022.2361020.48600K562RBM15
    U2AF2ENSG00000063244.83175.338002479.487400.356802.763601.92420K562RBM22
    U2AF2ENSG00000063244.83123.529902417.517800.369603.131101.62560K562RBM34
    U2AF2ENSG00000063244.85676.273906533.13620-0.202802.673501.87160K562SF3A3
    U2AF2ENSG00000063244.82082.651601603.039800.377502.259901.48920K562SF3B4
    U2AF2ENSG00000063244.81091.835001555.84620-0.510905.634403.16550K562SND1
    U2AF2ENSG00000063244.86400.524104284.762600.578902.462201.33160K562SNRNP200
    U2AF2ENSG00000063244.83409.120702535.747600.426903.675802.86660K562SRSF1
    U2AF2ENSG00000063244.82938.180002395.148600.294702.415701.44440K562SRSF5
    U2AF2ENSG00000063244.84493.727905183.74990-0.206102.397401.31120K562SRSF7
    U2AF2ENSG00000063244.81330.977301747.77010-0.393005.119703.28900K562SSB
    U2AF2ENSG00000063244.83681.242502566.058100.520506.149305.06010K562TARDBP
    U2AF2ENSG00000063244.83394.237302475.327400.455404.579703.48750K562TIA1
    U2AF2ENSG00000063244.83513.228202429.704400.531906.537104.68730K562TRA2A
    U2AF2ENSG00000063244.8455.784701543.55960-1.7598017.2121015.15890K562U2AF2
    U2AF2ENSG00000063244.85492.238307020.26170-0.354108.676807.49030K562UPF1
    U2AF2ENSG00000063244.84740.990006007.01480-0.341504.152903.07400K562WDR3
    U2AF2ENSG00000063244.85062.015107417.78970-0.551308.650006.99720K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    9,621 alternative splicing events after Knockdown/Knockout U2AF2 protein :

    Only display 100 entries as example. Please click "View All" button to see all 9,621 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEGLB1ENSG00000170266.11chr3-3311858533118729331140353311420533138210331382840.276000.001690.02189includedHepG2U2AF2
    SERP11-566K11.7ENSG00000267048.1chr16+8997341289973496899725648997269289973650899737300.145000.000000.00000includedHepG2U2AF2
    SETXNENSG00000136810.8chr9-1130136371130137301130070571130071231130186911130187460.387000.001920.02445includedHepG2U2AF2
    SEAS3MTENSG00000214435.3chr10+1046298401046299681046295611046296021046322041046323550.327000.001030.01447includedHepG2U2AF2
    SEZBTB8OSENSG00000176261.11chr1-3309955133099711330874303308754933116033331165040.125000.001780.02295includedHepG2U2AF2
    SEADAT2ENSG00000189007.11chr6-1437625741437626371437597261437598311437716991437718100.332000.001050.01468includedHepG2U2AF2
    SEIMMP1LENSG00000148950.5chr11-3147780631477933314550063145511731531065315311100.335000.000010.00022includedHepG2U2AF2
    SEFNDC3BENSG00000075420.8chr3+1719796581719798731719690491719693311720037151720037740.058000.000000.00013includedHepG2U2AF2
    SEEPB41L2ENSG00000079819.12chr6-1311978131311979151311914671311915211311992431311993900.154000.000410.00653includedHepG2U2AF2
    SEL3MBTL4ENSG00000154655.10chr18-6263945626403762444826244587630190163019560.351000.006860.06812includedHepG2U2AF2
    SESCARB1ENSG00000073060.11chr12-1252672281252673571252630441252631321252709021252710490.067000.007170.07040includedHepG2U2AF2
    SEMARCH8ENSG00000165406.11chr10-4595518745955325459545674595471545956678459568590.354000.000010.00032includedHepG2U2AF2
    SEAAMDCENSG00000087884.10chr11+7755206477552106775321997753228777553524775536740.202000.007440.07245includedHepG2U2AF2
    SETCEA2ENSG00000171703.12chr20+6269524462695302626945896269473762697828626978910.406000.006200.06295includedHepG2U2AF2
    SESPOCK2ENSG00000107742.8chr10-7383265973832668738322607383230673847897738485310.064000.004970.05283includedHepG2U2AF2
    SEING5ENSG00000168395.10chr2+2426635402426635892426626242426626862426644032426688930.390000.000000.00000includedHepG2U2AF2
    SESMIM7ENSG00000214046.4chr19-1676341516763772167564711675807216764845167649360.201000.000030.00063includedHepG2U2AF2
    SEILF3ENSG00000129351.13chr19+1079802110798384107945921079464610799225107993540.109000.000000.00005includedHepG2U2AF2
    SEAZI2ENSG00000163512.9chr3-2838300228383087283818922838211328390091283902810.070000.005400.05636includedHepG2U2AF2
    SEKTN1ENSG00000126777.13chr14+5613067256130759561282395612833056133958561340480.377000.000000.00000includedHepG2U2AF2
    SETMCC1ENSG00000172765.12chr3-1295760921295762481295671851295672551295991511295994020.287000.005700.05883includedHepG2U2AF2
    SEPPP6R2ENSG00000100239.11chr22+5082741450827540508105005081057950832321508325640.378000.000030.00063includedHepG2U2AF2
    SEPUM2ENSG00000055917.11chr2-2047834320478580204629532046322120482707204829920.296000.000000.00000includedHepG2U2AF2
    SECFBENSG00000243649.4chr6+3189573131895941318954743189557531901386319015600.142000.000340.00572includedHepG2U2AF2
    SEIMMP2LENSG00000184903.5chr7-1110573141110573981106035551106036211111272931111273970.591000.000010.00021includedHepG2U2AF2
    SECAPRIN2ENSG00000110888.13chr12-3088656230886645308842763088444430887901308881400.262000.000010.00015includedHepG2U2AF2
    SECAPRIN2ENSG00000110888.13chr12-3087201230872159308694413086961030876192308762480.123000.000800.01164includedHepG2U2AF2
    SELUC7L3ENSG00000108848.11chr17+4881464748814840488143204881438748817666488177060.233000.000000.00000includedHepG2U2AF2
    SEPPP2R3CENSG00000092020.6chr14-3558125035581398355797303557983535585815355859430.055000.000050.00100includedHepG2U2AF2
    SETMEM59ENSG00000116209.7chr1-5451432254514355545129395451304554518672545190780.065000.011050.09867includedHepG2U2AF2
    SEZCCHC11ENSG00000134744.9chr1-5294709452947307529433795294355452947475529475950.087000.000610.00929includedHepG2U2AF2
    SEUBE2D2ENSG00000131508.11chr5+1389418281389419921389407501389414001389799561389800200.082000.010300.09349includedHepG2U2AF2
    SESPRED2ENSG00000198369.5chr2-6557156965571728655617626556190765571852655719200.174000.000000.00000includedHepG2U2AF2
    SEEHMT1ENSG00000181090.13chr9+1406467821406468601406383531406385421406486221406487430.114000.001470.01961includedHepG2U2AF2
    SEDLG1ENSG00000075711.16chr3-1968317731968318761968177821968178971968427971968429540.079000.007940.07618includedHepG2U2AF2
    SEDLG1ENSG00000075711.16chr3-1968766131968766671968695881968696391969212951969214600.139000.008400.07939includedHepG2U2AF2
    SETOP1MTENSG00000184428.8chr8-1444162771444164551444133931444135091444169091444169650.122000.002370.02900includedHepG2U2AF2
    SEAPOL2ENSG00000128335.9chr22-3663028136630381366294473662950136635486366356070.175000.000520.00803includedHepG2U2AF2
    SEMETAP1ENSG00000164024.7chr4+9992691999927017999168909991701899950017999500690.053000.000010.00026includedHepG2U2AF2
    SEMARK3ENSG00000075413.13chr14+1038652871038653781038518771038524171038714121038716040.150000.000220.00389includedHepG2U2AF2
    SERCAN3ENSG00000117602.7chr1+2485957224859744248577072485788124861582248618470.070000.006370.06432includedHepG2U2AF2
    SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.083000.000000.00000includedHepG2U2AF2
    SETBCELENSG00000154114.8chr11+1209436931209437491209306771209307941209574861209576480.276000.000000.00012includedHepG2U2AF2
    SEZNF680ENSG00000173041.7chr7-6402132364021651640047236400481064023302640234530.702000.000010.00017includedHepG2U2AF2
    SEPAAF1ENSG00000175575.8chr11+7359797373598144735898237358986473598398735985020.238000.002930.03441includedHepG2U2AF2
    SEASCC2ENSG00000100325.10chr22-3022823330228331302216103022176930230430302305390.102000.006520.06551includedHepG2U2AF2
    SEKDM2BENSG00000089094.12chr12-1218813671218815961218807941218808331218818141218820750.062000.005740.05913includedHepG2U2AF2
    SESPTBN1ENSG00000115306.11chr2+5486884454869010548648495486494054870119548702660.188000.000000.00000includedHepG2U2AF2
    SESAE1ENSG00000142230.7chr19+4769381047693933476730744767318047700489477006340.121000.000000.00002includedHepG2U2AF2
    SEENTPD1-AS1ENSG00000226688.2chr10-9766458697664674976362749763641797849022978490640.361000.004880.05217includedHepG2U2AF2
    SEHELZENSG00000198265.7chr17-6518112765181261651747746517504265184434651844770.109000.001330.01795includedHepG2U2AF2
    SECRKENSG00000167193.7chr17-1339913133998813239821326944134008313404490.245000.000090.00188includedHepG2U2AF2
    SEPHF20ENSG00000025293.11chr20+3437024934370531343599473436000134389412343895270.084000.000090.00179includedHepG2U2AF2
    SENDUFB3ENSG00000119013.4chr2+2019370012019370842019367522019367822019436032019437450.077000.000370.00605includedHepG2U2AF2
    SELINC00969ENSG00000242086.4chr3+1954232311954234601954162091954163091954259001954260780.209000.000010.00021includedHepG2U2AF2
    SEARVCFENSG00000099889.9chr22-1996422819964399199632081996328019964937199651090.199000.000510.00798includedHepG2U2AF2
    SEAIPENSG00000110711.5chr11+6725673767256926672544766725465667257508672576850.095000.000180.00318includedHepG2U2AF2
    SERAP1GAPENSG00000076864.15chr1-2193015021930405219292962192940621932558219326900.359000.002660.03184includedHepG2U2AF2
    SESTX2ENSG00000111450.9chr12-1312968541312969881312931751312932491312975011312975760.134000.000000.00000includedHepG2U2AF2
    SESTX2ENSG00000111450.9chr12-1312805391312806651312753781312765221312830691312831800.126000.009420.08705includedHepG2U2AF2
    SEPLEKHA6ENSG00000143850.8chr1-2042259292042260162042196732042197422042264802042269970.508000.000250.00431includedHepG2U2AF2
    SEPLEKHA6ENSG00000143850.8chr1-2042139912042141312042108122042109422042147422042148540.133000.010980.09822includedHepG2U2AF2
    SETPCN1ENSG00000186815.8chr12+1137039841137041611136981721136982971137056471137057610.147000.001090.01514includedHepG2U2AF2
    SERNF34ENSG00000170633.12chr12+1218539611218541801218379461218380211218556631218557140.087000.003580.04060includedHepG2U2AF2
    SESTARD4ENSG00000164211.8chr5-1108407121108407411108376591108377861108420271108420770.053000.004750.05103includedHepG2U2AF2
    SEACSL4ENSG00000068366.15chrX-1089709611089710431089393721089394251089763671089766320.171000.000040.00096includedHepG2U2AF2
    SEWASF3ENSG00000132970.8chr13+2725068527250727272460082724612627254171272543380.332000.000000.00001includedHepG2U2AF2
    SEMYL6ENSG00000092841.14chr12+5655340656553514565524675655249556553758565539320.085000.003540.04022includedHepG2U2AF2
    SEPKP4ENSG00000144283.17chr2+1595180731595181801595178441595179621595194081595196000.054000.002400.02930includedHepG2U2AF2
    SEPKP4ENSG00000144283.17chr2+1595332501595333791595303941595305121595350921595351660.187000.000000.00001includedHepG2U2AF2
    SEPLK1S1ENSG00000088970.11chr20+2121148021211635212096482120975321213371212134680.161000.000000.00000includedHepG2U2AF2
    SEFUCA2ENSG00000001036.9chr6-1438250491438252221438230681438232591438283731438285610.670000.000000.00007includedHepG2U2AF2
    SERABEPKENSG00000136933.12chr9+1279756481279758011279698421279700001279828171279829790.066000.000170.00308includedHepG2U2AF2
    SERAB11FIP1ENSG00000156675.11chr8-3772879537730697377279373772804637732032377328400.273000.000140.00256includedHepG2U2AF2
    SETNKSENSG00000173273.11chr8+9629878962993396276409627772963415996345460.111000.006640.06640includedHepG2U2AF2
    SEVCLENSG00000035403.12chr10+7587166675871870758687287586891475873941758741450.222000.000000.00000includedHepG2U2AF2
    SETHBS1ENSG00000137801.9chr15+3987581739875893398743933987495339876188398763880.073000.000120.00237includedHepG2U2AF2
    SEPITRM1ENSG00000107959.11chr10-3185797318596731855803185693318648331865580.137000.000110.00214includedHepG2U2AF2
    SESGMS1ENSG00000198964.9chr10-5223881952238997522266495222669252279590522796810.693000.008920.08329includedHepG2U2AF2
    SEPTCHD4ENSG00000244694.3chr6-4796325647963365478673444786967147976369479768500.136000.000080.00157includedHepG2U2AF2
    SEALDH3A2ENSG00000072210.14chr17+1955859319558700195558591955594519559678195598870.108000.000000.00000includedHepG2U2AF2
    SEAPOL1ENSG00000100342.16chr22+3664988336650037366491783664926536650982366510450.117000.000090.00187includedHepG2U2AF2
    SEANKMY1ENSG00000144504.11chr2-2414684532414689262414652202414652662414923302414924740.334000.010480.09473includedHepG2U2AF2
    SEIVNS1ABPENSG00000116679.11chr1-1852756161852757571852746671852747751852761451852762710.709000.000000.00000includedHepG2U2AF2
    SECIRBPENSG00000099622.9chr19+1270926127103512693481269409127132712714660.833000.000990.01397includedHepG2U2AF2
    SEAPTXENSG00000137074.14chr9-3298808032988127329875413298772932989756329898930.191000.003400.03889includedHepG2U2AF2
    SELPCAT1ENSG00000153395.5chr5-1467295146745314668631467005147094014710390.061000.000000.00000includedHepG2U2AF2
    SEZDHHC7ENSG00000153786.8chr16-8502236885022479850154758501560085023909850242410.280000.000000.00000includedHepG2U2AF2
    SEDPM1ENSG00000000419.8chr20-4955740149557470495526844955279949558567495586630.069000.002740.03250includedHepG2U2AF2
    SETTC28ENSG00000100154.10chr22-2849107228491170284900672849023328492177284923960.556000.001730.02243includedHepG2U2AF2
    SERBX1ENSG00000100387.8chr22+4136005041360121413473624134748041363802413638880.083000.004390.04793includedHepG2U2AF2
    SEPLOD2ENSG00000152952.7chr3-1457956481457957111457945681457946821457969021457970440.289000.000000.00007includedHepG2U2AF2
    SEPFDN5ENSG00000123349.9chr12+5368962253689675536893595368942353691633536917080.118000.010170.09256includedHepG2U2AF2
    SEMGRN1ENSG00000102858.8chr16+4736259473630447338434733933473879647390400.195000.001140.01584includedHepG2U2AF2
    SEKIF15ENSG00000163808.12chr3+4483827644838333448357084483591844839042448391680.076000.001310.01771includedHepG2U2AF2
    SEZCCHC7ENSG00000147905.13chr9+3726045137260562371263083712693937302184373022280.057000.001250.01702includedHepG2U2AF2
    SEMBNL1ENSG00000152601.13chr3+1521644921521645461521630701521633281521654081521655620.086000.003310.03812includedHepG2U2AF2
    SESLC28A1ENSG00000156222.7chr15+8542990285430018854278928542798285430975854310870.305000.004150.04584includedHepG2U2AF2
    SEITGA2ENSG00000164171.6chr5+5234419252344307523408305234092252347240523473890.134000.000340.00559includedHepG2U2AF2
    SEGCNT2ENSG00000111846.11chr6+1052886310529074105277061052789310621583106216760.192000.006240.06324includedHepG2U2AF2





    4 RBPs can affect the splicing of U2AF2 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEU2AF2ENSG00000063244.8chr19+5617313656173196561724035617255556173867561739840.099000.000000.00000includedK562SF3B4
    A3SSU2AF2ENSG00000063244.8chr19+5618038056180535561804485618053556180035561801580.102000.000670.01923longerHepG2U2AF2
    A5SSU2AF2ENSG00000063244.8chr19+5617497156175207561749715617511056179872561799520.093000.000000.00000longerK562AQR
    A5SSU2AF2ENSG00000063244.8chr19+5618044856180547561804485618053556180809561810580.160000.000000.00041longerHepG2PCBP1

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The U2AF2 protein affects to its own RNA splicing after knockdown/knockout.

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    A3SSU2AF2ENSG00000063244.8chr19+5618038056180535561804485618053556180035561801580.102000.000670.01923longerHepG2U2AF2