SSUH2

General Information

Gene Name       : SSUH2
Gene ID             : ENSG00000125046.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SSUH2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SSUH2ENSG00000125046.140.000.010.01ENCSR000AEF
HepG2SSUH2ENSG00000125046.1439.8127.7733.79ENCSR985KAT
K562SSUH2ENSG00000125046.140.020.030.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SSUH2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SSUH2 RNA is bound by 29 proteins.  







eCLIP assay for SSUH2 is not avaliable on ENCORE database.





29 proteins are bound to SSUH2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr386817228681768-3'-UTR,intron-Distal,intron-Proximal3.715889.59205HepG2U2AF2
chr386725588672616-3'-UTR,CDS,intron-Distal,intron-Proximal3.365364.96088HepG2GRWD1
chr386737358673796-3'-UTR,CDS,intron-Distal,intron-Proximal4.4264413.35495HepG2PPIG
chr386653308665411-3'-UTR,CDS,intron-Distal,intron-Proximal3.771728.82653HepG2SF3A3
chr386713368671401-3'-UTR,CDS,intron-Distal,intron-Proximal4.1670317.27120HepG2PPIG
chr386693898669432-3'-UTR,CDS,intron-Distal3.653343.71240HepG2PABPN1
chr386612728661329-3'-UTR,intron-Distal,intron-Proximal,polyA_signal,polyA_site3.829223.09432HepG2ZC3H11A
chr386693778669429-3'-UTR,CDS,intron-Distal,intron-Proximal3.051129.43433HepG2PPIG
chr386652318665344-3'-UTR,CDS,intron-Distal,intron-Proximal3.297407.64256HepG2PABPN1
chr386724578672513-3'-UTR,CDS,intron-Distal,intron-Proximal4.7350812.09955HepG2PRPF8
chr386693838669465-3'-UTR,CDS,intron-Distal,intron-Proximal3.231193.90804HepG2GRWD1
chr386672278667258-3'-UTR,CDS,intron-Distal,intron-Proximal3.891895.36555HepG2BCLAF1
chr386753518675403-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.7756111.38699HepG2PPIG
chr386769788677058-3'-UTR,CDS,intron-Distal,intron-Proximal3.9440013.47664HepG2PPIG
chr386753518675393-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.176665.69345HepG2BCLAF1
chr386615038661650-3'-UTR,CDS,intron-Distal,intron-Proximal5.014196.18915HepG2PABPN1
chr386653088665346-3'-UTR,CDS,intron-Distal,intron-Proximal3.542166.13978HepG2PPIG
chr386725678672618-3'-UTR,CDS,intron-Distal,intron-Proximal3.115776.70384HepG2PPIG
chr386679288667999-3'-UTR,CDS,intron-Distal3.583534.93175HepG2GRWD1
chr386679128668008-3'-UTR,CDS,intron-Distal,intron-Proximal4.0303122.79640HepG2PPIG
chr386694548669525-3'-UTR,CDS,intron-Distal,intron-Proximal3.219145.96349HepG2SF3B4
chr386725628672630-3'-UTR,CDS,intron-Distal,intron-Proximal3.533549.23155HepG2BUD13
chr386756228675694-3'-UTR,CDS,intron-Distal,intron-Proximal4.268374.08576HepG2U2AF1
chr386774498677530-3'-UTR,5'-UTR,CDS,intron-Distal3.460236.27819HepG2PPIG
chr386653018665358-3'-UTR,CDS,intron-Distal,intron-Proximal3.145239.07209HepG2U2AF2
chr386653158665379-3'-UTR,CDS,intron-Distal,intron-Proximal5.094054.62947HepG2AQR
chr386679408668002-3'-UTR,CDS,intron-Distal4.276199.19628HepG2BUD13
chr386611588661227-3'-UTR,intron-Distal,intron-Proximal3.647526.58563HepG2DDX55
chr386769788677068-3'-UTR,CDS,intron-Distal,intron-Proximal3.217143.68881HepG2SRSF1
chr386672658667334-3'-UTR,CDS,intron-Distal,intron-Proximal3.7509712.76774HepG2PPIG
chr386694368669584-3'-UTR,CDS,intron-Distal,intron-Proximal4.3566324.30226HepG2EFTUD2
chr386616668661736-3'-UTR,CDS,intron-Distal3.231876.56607HepG2BUD13
chr386714018671412-3'-UTR,CDS,intron-Distal4.292208.09084HepG2PPIG
chr386692808669348-3'-UTR,intron-Distal,intron-Proximal3.428255.36626HepG2EFTUD2
chr386611488661234-3'-UTR,intron-Distal,intron-Proximal3.909626.34803HepG2LARP4
chr386611328661224-3'-UTR,intron-Distal,intron-Proximal3.045704.53518HepG2ZC3H11A
chr386754218675526-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.2286420.10548HepG2PPIG
chr386770538677143-3'-UTR,CDS,intron-Distal,intron-Proximal3.0154112.71758HepG2U2AF2
chr386756138675687-3'-UTR,CDS,intron-Distal,intron-Proximal4.153737.56784HepG2SF3B4
chr386937178693770-5'-UTR,intron-Distal,intron-Proximal3.764798.84609HepG2NCBP2
chr386752728675316-intron-Distal,intron-Proximal4.303734.61506HepG2EFTUD2
chr386823158682365-intron-Distal5.4945717.71142HepG2PTBP1
chr386856238685678-intron-Distal3.415524.28254HepG2MATR3
chr386769238676966-intron-Distal,intron-Proximal3.506033.85482HepG2CDC40
chr386653578665417-intron-Distal,intron-Proximal3.939803.71057HepG2LSM11
chr386681348668230-intron-Distal4.435968.66070HepG2PRPF4
chr386671318667196-intron-Distal,intron-Proximal3.348785.05663HepG2PRPF8
chr386934628693533-intron-Distal3.807163.39593HepG2PRPF4
chr386694718669531-intron-Distal,intron-Proximal3.6416611.55843HepG2SF3A3
chr386842988684341-intron-Distal4.600096.05753HepG2SUGP2
chr386668498666990-intron-Distal4.5063915.39793HepG2PCBP2
chr386680218668081-intron-Distal,intron-Proximal3.019413.00054HepG2PRPF4
chr386654928665575-intron-Distal4.054256.79646HepG2PRPF8
chr386840838684130-intron-Distal3.547505.06177HepG2SUGP2
chr386671968667225-intron-Distal,intron-Proximal4.315224.02817HepG2PRPF8
chr386678338667893-intron-Distal,intron-Proximal4.284317.43035HepG2EFTUD2
chr386653508665402-intron-Distal,intron-Proximal3.055593.63065HepG2SF3B4
chr386851698685224-intron-Distal3.866766.73852HepG2SUGP2
chr386671278667172-intron-Distal,intron-Proximal4.840594.74221HepG2PTBP1
chr386822468682370-intron-Distal3.013594.39881HepG2MATR3
chr386668758666961-intron-Distal3.8405911.88117HepG2PTBP1
chr386822968682315-intron-Distal5.3098922.77159HepG2PTBP1
chr386759938676072-intron-Distal,intron-Proximal3.468645.28104HepG2U2AF1
chr386822268682296-intron-Distal4.8843219.37190HepG2PTBP1
chr386840878684120-intron-Distal4.111673.27829HepG2MATR3
chr386815178681574-intron-Distal,intron-Proximal3.582264.81844HepG2SUGP2
chr386712408671305-intron-Distal,intron-Proximal3.2801412.32496HepG2EFTUD2
chr386877728687833-intron-Distal3.470164.45128HepG2HNRNPL
chr386773548677425-intron-Distal,intron-Proximal3.356064.25556HepG2TIAL1
chr386850878685131-intron-Distal3.863553.16986HepG2QKI
chr386680138668079-intron-Distal,intron-Proximal4.5999110.50807HepG2SF3B4
chr386844868684532-intron-Distal5.025978.29733HepG2SUGP2
chr386850158685029-intron-Distal3.809023.39864HepG2SUGP2
chr386678408667892-intron-Distal,intron-Proximal4.311743.45219HepG2RBFOX2
chr386752828675325-intron-Distal,intron-Proximal5.132165.56495HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SSUH2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SSUH2 is not available on ENCORE database.

  • 84 RBPs can affect the levels of SSUH2.  








The Knockdown/knockout RNA-Seq assay for SSUH2 is not available on ENCORE database.





84 RBPs can affect the gene expression of SSUH2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SSUH2ENSG00000125046.10757.492101063.68340-0.489803.513302.45610HepG2ABCF1
SSUH2ENSG00000125046.10667.88510989.30290-0.566804.666903.91620HepG2ACO1
SSUH2ENSG00000125046.10995.34830649.724500.615306.008104.61300HepG2ADAR
SSUH2ENSG00000125046.10428.553001320.90730-1.6240027.5705026.09790HepG2AKAP1
SSUH2ENSG00000125046.10800.100301092.88190-0.449903.346302.48220HepG2ASCC1
SSUH2ENSG00000125046.101717.211601417.819400.276303.049702.33380HepG2AUH
SSUH2ENSG00000125046.10686.74510439.520700.643705.656804.83800HepG2BOP1
SSUH2ENSG00000125046.101765.791501038.331800.765909.817908.44010HepG2CIRBP
SSUH2ENSG00000125046.101454.62300988.860100.556709.899908.79910HepG2CKAP4
SSUH2ENSG00000125046.10566.071101114.89300-0.977903.325702.48030HepG2CNOT7
SSUH2ENSG00000125046.101297.40890875.866200.566805.306303.81290HepG2CPSF7
SSUH2ENSG00000125046.10685.61810421.060800.703306.199804.69210HepG2CSTF2
SSUH2ENSG00000125046.101411.847601102.111100.357203.356102.66180HepG2CELF1
SSUH2ENSG00000125046.101001.296001185.00640-0.243002.521301.80850HepG2DAZAP1
SSUH2ENSG00000125046.101085.43980746.302400.540305.541104.61570HepG2DDX21
SSUH2ENSG00000125046.10869.40990646.945500.426303.580002.04600HepG2DDX52
SSUH2ENSG00000125046.10831.61280458.194900.859905.187303.86140HepG2DDX59
SSUH2ENSG00000125046.10500.20250799.55130-0.676706.485704.99260HepG2DDX5
SSUH2ENSG00000125046.102263.633801087.130401.0580015.2471013.95760HepG2DDX6
SSUH2ENSG00000125046.10597.22910946.43590-0.664205.668104.76230HepG2DKC1
SSUH2ENSG00000125046.10984.40100648.477400.6021010.961309.75990HepG2DNAJC2
SSUH2ENSG00000125046.10455.77320687.99970-0.594102.706501.61350HepG2AGO1
SSUH2ENSG00000125046.101443.690901044.793600.466403.747203.06400HepG2EIF2S1
SSUH2ENSG00000125046.10482.84850705.36650-0.546802.447001.43070HepG2EIF3G
SSUH2ENSG00000125046.101666.104501124.316100.567303.907603.09620HepG2EIF4B
SSUH2ENSG00000125046.101438.278701169.110500.298803.550002.62060HepG2EIF4G1
SSUH2ENSG00000125046.101043.728901627.96470-0.6413011.2289010.14950HepG2ETF1
SSUH2ENSG00000125046.10245.98660404.21360-0.716502.260201.35060HepG2FTO
SSUH2ENSG00000125046.10787.23150457.338300.783406.836805.85800HepG2GPKOW
SSUH2ENSG00000125046.101534.52900943.910100.701003.792602.16840HepG2HNRNPA0
SSUH2ENSG00000125046.101125.18630706.931600.6704011.194409.88000HepG2HNRNPF
SSUH2ENSG00000125046.101687.001301094.843700.623607.310906.21550HepG2HNRNPK
SSUH2ENSG00000125046.101848.102201079.439900.7757025.5982023.77140HepG2HNRNPL
SSUH2ENSG00000125046.10661.16110436.450500.599104.411003.63250HepG2HNRNPLL
SSUH2ENSG00000125046.10959.73060729.832600.395004.640603.87260HepG2HNRNPU
SSUH2ENSG00000125046.10888.572801257.14370-0.500603.513602.12560HepG2HSPD1
SSUH2ENSG00000125046.101191.21300696.116800.7749011.5899010.20720HepG2IGF2BP1
SSUH2ENSG00000125046.101636.342501098.441700.574905.739804.80170HepG2IGF2BP2
SSUH2ENSG00000125046.101772.648601104.993800.681805.796504.29700HepG2KHSRP
SSUH2ENSG00000125046.10864.054401256.28930-0.540003.531502.11760HepG2KRR1
SSUH2ENSG00000125046.101930.975201172.110500.720107.599506.59370HepG2MATR3
SSUH2ENSG00000125046.101071.48610869.167600.301802.073601.36830HepG2MSI2
SSUH2ENSG00000125046.10666.81850445.223000.582703.030502.01350HepG2MTPAP
SSUH2ENSG00000125046.101128.25600729.865600.628307.456605.49740HepG2NAA15
SSUH2ENSG00000125046.101938.220201175.051700.7219014.7331013.03530HepG2NOL12
SSUH2ENSG00000125046.10539.57070722.39950-0.421003.063502.17690HepG2PARN
SSUH2ENSG00000125046.101552.103101000.067800.634003.918902.10380HepG2PNPT1
SSUH2ENSG00000125046.10928.79820650.951000.512706.265705.18990HepG2PPIL4
SSUH2ENSG00000125046.10613.21830739.97340-0.271102.036501.36570HepG2PRPF4
SSUH2ENSG00000125046.101090.98580746.154900.548003.147601.85650HepG2PRPF6
SSUH2ENSG00000125046.101586.568201110.206200.515009.269808.38560HepG2PTBP1
SSUH2ENSG00000125046.10884.199601121.69890-0.343202.649202.06390HepG2PUF60
SSUH2ENSG00000125046.10784.235601190.74380-0.6025012.3187011.25630HepG2PUM1
SSUH2ENSG00000125046.10799.001001189.86730-0.574507.333706.25990HepG2PUM2
SSUH2ENSG00000125046.101941.718601007.635800.9463032.4335030.75380HepG2PUS1
SSUH2ENSG00000125046.102067.315301202.269300.781909.674708.60610HepG2QKI
SSUH2ENSG00000125046.101502.807101098.890700.451505.627104.45740HepG2RBM15
SSUH2ENSG00000125046.101084.731601360.65260-0.327003.467002.90530HepG2RBM22
SSUH2ENSG00000125046.10630.96240826.62380-0.389702.742901.75470HepG2RBM27
SSUH2ENSG00000125046.101486.05190761.673300.964103.775102.99730HepG2RPLP0
SSUH2ENSG00000125046.10389.48500609.65360-0.646405.874005.01790HepG2RPS19
SSUH2ENSG00000125046.10956.73860511.385100.903608.689907.40190HepG2RRP9
SSUH2ENSG00000125046.10948.62890649.943600.545408.052307.03890HepG2SAFB2
SSUH2ENSG00000125046.10416.75090611.81410-0.553903.995302.86670HepG2SERBP1
SSUH2ENSG00000125046.10752.01180431.973300.799705.833104.84210HepG2SF3B1
SSUH2ENSG00000125046.101362.168901075.556700.340704.904404.01140HepG2SLBP
SSUH2ENSG00000125046.10994.84360667.198900.576303.955602.01250HepG2SND1
SSUH2ENSG00000125046.101338.540401536.76340-0.199202.008001.56040HepG2SRFBP1
SSUH2ENSG00000125046.10980.338401206.41630-0.299403.016902.52830HepG2SRSF1
SSUH2ENSG00000125046.10895.695001107.52730-0.306303.121202.46210HepG2SRSF5
SSUH2ENSG00000125046.101166.81980694.568100.7483014.1024012.74050HepG2SRSF7
SSUH2ENSG00000125046.101629.31900981.516900.7311019.1045017.89440HepG2SRSF9
SSUH2ENSG00000125046.10670.66700425.525700.656305.570904.59480HepG2TARDBP
SSUH2ENSG00000125046.10699.437301230.57920-0.815104.179202.88660HepG2TBRG4
SSUH2ENSG00000125046.10626.13150447.247800.485302.724601.73580HepG2TFIP11
SSUH2ENSG00000125046.101057.45040715.510200.563409.028508.10030HepG2TRIM56
SSUH2ENSG00000125046.101158.92790918.721600.335002.282901.70710HepG2U2AF1
SSUH2ENSG00000125046.101742.113301159.972900.586605.131003.97050HepG2UBE2L3
SSUH2ENSG00000125046.10605.06320394.169800.618204.407103.44810HepG2UCHL5
SSUH2ENSG00000125046.101384.92560808.655100.7761019.1460017.63100HepG2UPF1
SSUH2ENSG00000125046.101321.91110780.721800.7596016.9290015.63400HepG2UTP3
SSUH2ENSG00000125046.10537.62710730.26140-0.441804.923504.07100HepG2ZC3H8
SSUH2ENSG00000125046.101182.31700889.363100.410706.438905.69500HepG2ZNF622
SSUH2ENSG00000125046.1011.576700.480204.591502.516501.94440K562HNRNPC
SSUH2ENSG00000125046.1018.471302.274303.021703.716902.77410K562PUF60
SSUH2ENSG00000125046.1011.850700.543204.447202.448401.53810K562SF3B1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SSUH2 is not available on ENCORE database.





15 RBPs can affect the splicing of SSUH2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESSUH2ENSG00000125046.10chr3-8676106867628786753518675627867698586770670.109000.000080.01261includedHepG2G3BP1
SESSUH2ENSG00000125046.10chr3-8681633868175586774448677543869367586937470.117000.000010.00185includedHepG2G3BP1
SESSUH2ENSG00000125046.10chr3-8676083867633186753518675481867698586770670.130000.000540.03763includedHepG2RBM22
SESSUH2ENSG00000125046.10chr3-8670953867106386693408669469867134986714120.060000.000150.00396includedHepG2U2AF1
SESSUH2ENSG00000125046.10chr3-867134986714128669383866946986724908672615-0.233000.000000.00000excludedHepG2U2AF1
SESSUH2ENSG00000125046.10chr3-8665533866573886652348665342866722786673240.051000.000770.02163includedHepG2HNRNPK
SESSUH2ENSG00000125046.10chr3-8667409866748786672278667333866791486680070.082000.000000.00005includedHepG2HNRNPK
SESSUH2ENSG00000125046.10chr3-8692268869248286816338681755869367586937470.327000.009050.08431includedHepG2U2AF2
SESSUH2ENSG00000125046.10chr3-8676199867633186753518675627867698586770670.091000.000590.02860includedHepG2MATR3
SESSUH2ENSG00000125046.10chr3-8681633868175586774448677543869367586937470.116000.000000.00007includedHepG2MATR3
SESSUH2ENSG00000125046.10chr3-8681633868175586774448677543869367586937470.158000.000000.00089includedHepG2HNRNPL
SESSUH2ENSG00000125046.10chr3-8665551866573886651348665342866722786673330.128000.000040.00523includedHepG2HNRNPL
SESSUH2ENSG00000125046.10chr3-867698586770678675351867548186774448677543-0.100000.000990.02532excludedHepG2SRSF1
SESSUH2ENSG00000125046.10chr3-8676106867633186753518675481867698586770670.132000.000070.01279includedHepG2SSB
SESSUH2ENSG00000125046.10chr3-8671349867141286693838669469867249086726150.149000.000950.06516includedHepG2TIAL1
SESSUH2ENSG00000125046.10chr3-8681633868175586774448677543869367586937470.151000.000020.01559includedHepG2BCCIP
SESSUH2ENSG00000125046.10chr3-868163386817558677444867754386936758693747-0.239000.000280.05979excludedHepG2PRPF4
A3SSSSUH2ENSG00000125046.10chr3-8675351867633186753518675627867698586770670.164000.000040.00654longerHepG2HNRNPK
A3SSSSUH2ENSG00000125046.10chr3-8675351867633186753518675627867698586770670.178000.000010.00521longerHepG2MATR3
A3SSSSUH2ENSG00000125046.10chr3-867535186756278675351867548186774448677543-0.325000.000240.02749shorterHepG2SRSF1
A3SSSSUH2ENSG00000125046.10chr3-8676985867709086769858677067867744486775430.588000.000000.00028longerHepG2U2AF2
A3SSSSUH2ENSG00000125046.10chr3-8676985867714386769858677067867744486775430.548000.000000.00000longerHepG2U2AF1
A3SSSSUH2ENSG00000125046.10chr3-8675351867633186753518675627867698586770900.307000.000050.02593longerHepG2UCHL5
A5SSSSUH2ENSG00000125046.10chr3-8671327867141286713498671412866922986694690.095000.001320.08197longerHepG2SF3A3
MXESSUH2ENSG00000125046.10chr3-86816338681755869371086937378677444867754387006108700699-0.173000.005210.084662includedHepG2DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SSUH2 is not avaliable on ENCORE database.