CPSF7

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CPSF7	ENSG00000149532.15	67.78	63.39	65.59	ENCSR000AEF
HepG2	CPSF7	ENSG00000149532.15	56.00	63.44	59.72	ENCSR985KAT
K562	CPSF7	ENSG00000149532.15	64.35	70.11	67.23	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Controls	Method	Note
knockdown followed by RNA-seq	CPSF7-BGKLV24-K562	ENCSR222LRL	CPSF7	K562	Released	ENCSR667PLJ	shRNA	KD% = 70.7,69.7
knockdown followed by RNA-seq	CPSF7-BGHLV30-HepG2	ENCSR594DNW	CPSF7	HepG2	Released	ENCSR067GHD	shRNA	KD% = 92.0,88.7
knockdown followed by RNA-seq	CPSF7-BGKcLV28-K562	ENCSR709ILB	CPSF7	K562	Released	ENCSR220DTX	CRISPR	KD% = 63.6,69.9
knockdown followed by RNA-seq	CPSF7-BGHcLV29-HepG2	ENCSR339XFB	CPSF7	HepG2	Released	ENCSR462MFN	CRISPR	KD% = 79.0,78.8

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
CPSF7	ENCAB161FJH	A300-930A	1				BGHLV30-21, Released, ENCODE3
CPSF7	ENCAB196XQB	A301-360A	1			Released, ENCODE4	BGHcLV29-39, Released, ENCODE4	BGKcLV28-39, Released, ENCODE4

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
CPSF7	K562	shRNA	ENCSR222LRL	ENCSR667PLJ	CPSF7_BGKLV24_9_17600,CPSF7_BGKLV24_10_17601	non-target_BGKLV24_1_17594,non-target_BGKLV24_2_17595	70.7,69.7	Released	ENCODE3
CPSF7	HepG2	shRNA	ENCSR594DNW	ENCSR067GHD	CPSF7_BGHLV30-21,CPSF7_BGHLV30-22	NT_BGHLV30-1,NT_BGHLV30-2	92.0,88.7	Released	ENCODE3
CPSF7	K562	CRISPR			BGKcLV11-39,BGKcLV11-40	BGKcLV11-1,BGKcLV11-2	0.0,0.0	NotSatisfied	ENCODE4
CPSF7	K562	CRISPR			BGKcLV11-41,BGKcLV11-42	BGKcLV11-1,BGKcLV11-2	9.1,0.0	NotSatisfied	ENCODE4
CPSF7	K562	CRISPR	ENCSR709ILB	ENCSR220DTX	CPSF7-BGKcLV28-39,CPSF7-BGKcLV28-40	NT-BGKcLV28-1,NT-BGKcLV28-2	63.6,69.9	Released	ENCODE4
CPSF7	HepG2	CRISPR	ENCSR339XFB	ENCSR462MFN	CPSF7-BGHcLV29-39,CPSF7-BGHcLV29-40	NT-BGHcLV29-1,NT-BGHcLV29-2	79.0,78.8	Released	ENCODE4

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CPSF7 is not avaliable on ENCORE database.

Proteins bound to RNA

CPSF7 RNA is bound by 33 proteins.

eCLIP assay for CPSF7 is not avaliable on ENCORE database.

33 proteins are bound to CPSF7 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	61187952	61188002	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.99676	5.74979	HepG2	GRWD1
chr11	61171142	61171171	-	3'-UTR,intron-Distal	4.07893	6.81876	K562	UPF1
chr11	61188018	61188066	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.46615	5.70281	HepG2	U2AF2
chr11	61170826	61170883	-	3'-UTR,intron-Distal	3.36379	10.79975	K562	UPF1
chr11	61171966	61172031	-	3'-UTR,intron-Distal	4.06817	3.45716	HepG2	AKAP1
chr11	61187537	61187578	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.83955	9.56266	K562	AQR
chr11	61183830	61183954	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.09023	10.09142	HepG2	GRWD1
chr11	61178402	61178434	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.35496	6.23940	HepG2	PPIG
chr11	61188015	61188118	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.69351	12.13684	HepG2	AQR
chr11	61183733	61183804	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.06552	4.93750	K562	PCBP1
chr11	61188690	61188751	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.22149	6.69476	K562	BUD13
chr11	61170293	61170374	-	3'-UTR,intron-Distal	3.26880	7.65588	K562	ZC3H11A
chr11	61188694	61188745	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.88085	5.93840	HepG2	PRPF8
chr11	61171002	61171046	-	3'-UTR,intron-Distal	3.06212	5.07504	K562	UPF1
chr11	61171826	61171854	-	3'-UTR,intron-Distal,intron-Proximal	3.58377	6.55257	K562	UPF1
chr11	61172152	61172196	-	3'-UTR,intron-Distal	3.46248	6.88667	K562	BUD13
chr11	61188691	61188730	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.62445	12.33556	K562	PRPF8
chr11	61171674	61171738	-	3'-UTR,intron-Distal,intron-Proximal	3.99729	10.92054	K562	UPF1
chr11	61183750	61183790	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.66360	5.82160	HepG2	HNRNPK
chr11	61183723	61183868	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.37777	39.05203	HepG2	PCBP2
chr11	61171129	61171180	-	3'-UTR,intron-Distal	3.48325	4.77076	HepG2	LSM11
chr11	61172016	61172109	-	3'-UTR,intron-Distal	4.27304	6.34161	K562	PCBP1
chr11	61171948	61172012	-	3'-UTR,intron-Distal	3.45318	3.64832	HepG2	ZC3H11A
chr11	61187941	61187996	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.75876	12.01090	HepG2	PPIG
chr11	61170824	61170913	-	3'-UTR,intron-Distal	3.15610	7.31851	HepG2	LSM11
chr11	61188025	61188086	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.00535	18.60307	K562	AQR
chr11	61170822	61170893	-	3'-UTR,intron-Distal	3.70619	4.52386	HepG2	PABPN1
chr11	61171902	61171952	-	3'-UTR,intron-Distal	3.19880	5.64172	K562	FAM120A
chr11	61187941	61187980	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.09731	8.51432	HepG2	BCLAF1
chr11	61171632	61171667	-	3'-UTR,intron-Distal,intron-Proximal	4.25171	3.25872	K562	IGF2BP1
chr11	61172169	61172223	-	3'-UTR,intron-Distal	5.28459	7.28294	K562	AQR
chr11	61183914	61183956	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67796	5.58370	HepG2	PPIG
chr11	61171523	61171558	-	3'-UTR,intron-Distal	3.56761	8.59767	K562	TIA1
chr11	61187944	61187952	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.44427	4.23295	HepG2	GRWD1
chr11	61188022	61188080	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28811	6.61270	K562	PRPF8
chr11	61178370	61178411	-	3'-UTR,intron-Distal,intron-Proximal	3.76177	6.65114	HepG2	PRPF8
chr11	61172023	61172117	-	3'-UTR,intron-Distal	5.63628	18.15300	HepG2	PCBP2
chr11	61187378	61187420	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.37488	8.34710	K562	AQR
chr11	61171619	61171674	-	3'-UTR,intron-Distal,intron-Proximal	6.56792	22.44841	K562	UPF1
chr11	61188017	61188082	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.03649	7.00260	K562	BUD13
chr11	61183790	61183864	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.85824	4.34707	HepG2	HNRNPK
chr11	61171920	61171961	-	3'-UTR,intron-Distal	3.82631	6.84689	K562	UPF1
chr11	61171127	61171171	-	3'-UTR,intron-Distal	4.09100	3.28046	HepG2	ZC3H11A
chr11	61172143	61172195	-	3'-UTR,intron-Distal	3.20134	5.19836	HepG2	U2AF2
chr11	61187535	61187567	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.93490	10.18181	HepG2	PPIG
chr11	61171083	61171123	-	3'-UTR,intron-Distal	3.20519	3.91588	K562	UPF1
chr11	61187536	61187575	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.60199	5.19978	HepG2	BUD13
chr11	61188693	61188843	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.03489	15.10504	K562	EFTUD2
chr11	61172031	61172089	-	3'-UTR,intron-Distal	3.25229	3.52299	HepG2	AKAP1
chr11	61170374	61170421	-	3'-UTR,intron-Distal	5.35376	5.56446	K562	ZC3H11A
chr11	61171961	61172105	-	3'-UTR,intron-Distal	3.21374	16.42130	K562	UPF1
chr11	61187534	61187578	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.73955	8.41231	K562	BUD13
chr11	61170419	61170509	-	3'-UTR,intron-Distal	3.51228	5.57639	HepG2	ZC3H11A
chr11	61197121	61197209	-	5'-UTR,intron-Distal,intron-Proximal	3.58074	12.79738	HepG2	CSTF2T
chr11	61197268	61197349	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.05226	6.08339	HepG2	SF3B4
chr11	61197043	61197231	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.69489	26.76887	HepG2	GTF2F1
chr11	61197347	61197390	-	5'-UTR,intron-Distal,intron-Proximal	4.48263	3.49003	K562	PRPF8
chr11	61196671	61196751	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.27631	12.00587	K562	DDX3X
chr11	61196711	61196786	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.30932	7.34034	HepG2	U2AF2
chr11	61197249	61197310	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.28808	5.38345	HepG2	RBFOX2
chr11	61197325	61197408	-	5'-UTR,intron-Distal,intron-Proximal	3.68903	6.34676	HepG2	PRPF8
chr11	61197328	61197391	-	5'-UTR,intron-Distal,intron-Proximal	4.66376	5.90930	HepG2	AQR
chr11	61197115	61197230	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.51188	3.62703	K562	AKAP8L
chr11	61196649	61196738	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.17161	8.26462	HepG2	GRWD1
chr11	61197127	61197216	-	5'-UTR,intron-Distal,intron-Proximal	3.06570	4.90153	K562	AQR
chr11	61197209	61197248	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.80606	5.39685	HepG2	CSTF2T
chr11	61197114	61197265	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.28779	38.98055	HepG2	FAM120A
chr11	61197235	61197329	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.02757	7.83844	HepG2	GTF2F1
chr11	61197263	61197314	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.37474	8.80329	HepG2	PRPF4
chr11	61197124	61197221	-	5'-UTR,intron-Distal,intron-Proximal	3.22246	3.99385	K562	CSTF2T
chr11	61197192	61197263	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.50312	25.76248	HepG2	PRPF4
chr11	61197295	61197373	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.07387	8.29908	HepG2	CSTF2T
chr11	61196845	61196925	-	5'-UTR,intron-Distal,intron-Proximal	5.21021	18.53988	HepG2	PRPF4
chr11	61197075	61197187	-	5'-UTR,intron-Distal,intron-Proximal	5.55468	35.22537	HepG2	PRPF4
chr11	61196828	61196929	-	5'-UTR,intron-Distal,intron-Proximal	4.92156	12.25272	HepG2	GTF2F1
chr11	61197086	61197114	-	5'-UTR,intron-Distal,intron-Proximal	5.11080	6.62861	HepG2	FAM120A
chr11	61196980	61197023	-	5'-UTR,intron-Distal,intron-Proximal	4.64941	5.44815	HepG2	PRPF4
chr11	61197265	61197369	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.95081	17.66306	HepG2	FAM120A
chr11	61196827	61196929	-	5'-UTR,intron-Distal,intron-Proximal	4.49456	9.60715	HepG2	PCBP2
chr11	61197070	61197243	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.21976	14.89609	K562	GTF2F1
chr11	61197093	61197210	-	5'-UTR,intron-Distal,intron-Proximal	4.34562	9.29215	HepG2	EFTUD2
chr11	61197314	61197346	-	5'-UTR,intron-Distal,intron-Proximal	4.56064	3.70701	HepG2	PRPF4
chr11	61197149	61197199	-	5'-UTR,intron-Distal,intron-Proximal	4.70018	6.17312	HepG2	PCBP2
chr11	61196769	61196820	-	5'-UTR,intron-Distal,intron-Proximal	5.70858	21.92748	HepG2	SF3B4
chr11	61196827	61196961	-	5'-UTR,intron-Distal,intron-Proximal	3.06640	10.46758	HepG2	CSTF2T
chr11	61197310	61197374	-	5'-UTR,intron-Distal,intron-Proximal	3.09380	4.14293	HepG2	RBFOX2
chr11	61196746	61196790	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.81979	4.13847	K562	AQR
chr11	61196751	61196764	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.03895	3.08493	K562	DDX3X
chr11	61196662	61196686	-	CDS,intron-Distal	3.01593	7.22938	HepG2	PPIG
chr11	61188886	61188953	-	CDS,intron-Distal	3.53911	5.56491	HepG2	BCLAF1
chr11	61188793	61188882	-	CDS,intron-Distal,intron-Proximal	4.40430	17.14065	HepG2	PRPF8
chr11	61183553	61183585	-	CDS,intron-Distal,intron-Proximal	4.03393	10.64040	HepG2	PRPF8
chr11	61196653	61196671	-	CDS,intron-Distal,intron-Proximal	3.15651	3.33524	K562	DDX3X
chr11	61188776	61188865	-	CDS,intron-Distal,intron-Proximal	3.55798	6.20918	K562	BUD13
chr11	61183511	61183579	-	CDS,intron-Distal,intron-Proximal	3.28815	4.58271	K562	AQR
chr11	61188806	61188869	-	CDS,intron-Distal,intron-Proximal	4.40647	4.28193	HepG2	AQR
chr11	61183133	61183162	-	CDS,intron-Distal,intron-Proximal	3.24981	6.39282	HepG2	GRWD1
chr11	61183623	61183723	-	CDS,intron-Distal,intron-Proximal	3.96735	16.67387	HepG2	PCBP2
chr11	61183573	61183628	-	CDS,intron-Distal,intron-Proximal	3.10917	8.54654	K562	ZNF622
chr11	61179376	61179410	-	CDS,intron-Distal,intron-Proximal	4.17609	7.79455	HepG2	PPIG
chr11	61183109	61183167	-	CDS,intron-Distal,intron-Proximal	4.08962	14.95101	HepG2	PRPF8
chr11	61188713	61188773	-	CDS,intron-Distal,intron-Proximal	6.03059	21.90807	HepG2	EFTUD2
chr11	61183201	61183258	-	CDS,intron-Distal,intron-Proximal	3.16715	7.60260	K562	ZNF622
chr11	61188898	61189016	-	CDS,intron-Distal	3.71924	5.76403	K562	UCHL5
chr11	61188579	61188648	-	CDS,intron-Distal,intron-Proximal	4.38626	4.74172	HepG2	TIAL1
chr11	61188600	61188643	-	CDS,intron-Distal,intron-Proximal	4.06438	6.71940	K562	PRPF8
chr11	61189032	61189083	-	CDS,intron-Distal,intron-Proximal	3.28026	6.92518	HepG2	PPIG
chr11	61179202	61179248	-	CDS,intron-Distal,intron-Proximal	4.85693	17.96285	HepG2	PRPF8
chr11	61183133	61183194	-	CDS,intron-Distal,intron-Proximal	3.77141	7.64107	HepG2	PPIG
chr11	61188886	61188971	-	CDS,intron-Distal	3.74251	3.58697	HepG2	UCHL5
chr11	61188886	61188963	-	CDS,intron-Distal	3.13540	6.25786	K562	ZNF622
chr11	61179256	61179411	-	CDS,intron-Distal,intron-Proximal	3.48141	9.31761	HepG2	GRWD1
chr11	61188851	61188963	-	CDS,intron-Distal,intron-Proximal	3.22603	9.37593	HepG2	GRWD1
chr11	61188903	61189032	-	CDS,intron-Distal	3.16504	8.52439	HepG2	PPIG
chr11	61178434	61178478	-	CDS,intron-Distal,intron-Proximal	3.31934	7.60977	HepG2	PPIG
chr11	61183576	61183591	-	CDS,intron-Distal,intron-Proximal	3.70295	6.19204	K562	YBX3
chr11	61183652	61183725	-	CDS,intron-Distal,intron-Proximal	4.20347	16.08127	HepG2	DDX59
chr11	61179248	61179268	-	CDS,intron-Distal	5.04529	19.13516	HepG2	PRPF8
chr11	61183179	61183270	-	CDS,intron-Distal,intron-Proximal	3.32136	9.16855	K562	BUD13
chr11	61188859	61188882	-	CDS,intron-Distal,intron-Proximal	3.51771	6.41974	HepG2	PPIG
chr11	61183152	61183201	-	CDS,intron-Distal	3.23963	6.61971	K562	YBX3
chr11	61188963	61189044	-	CDS,intron-Distal	3.11395	9.25685	HepG2	GRWD1
chr11	61188702	61188757	-	CDS,intron-Distal,intron-Proximal	4.62237	7.53589	K562	AQR
chr11	61179189	61179262	-	CDS,intron-Distal,intron-Proximal	3.40808	7.34430	K562	PRPF8
chr11	61183591	61183624	-	CDS,intron-Distal,intron-Proximal	3.07242	4.96117	K562	YBX3
chr11	61183646	61183734	-	CDS,intron-Distal,intron-Proximal	3.68483	9.55885	HepG2	HNRNPK
chr11	61179259	61179346	-	CDS,intron-Distal	3.09311	7.43909	HepG2	BCLAF1
chr11	61183642	61183732	-	CDS,intron-Distal,intron-Proximal	3.41691	8.73667	K562	PCBP1
chr11	61179282	61179353	-	CDS,intron-Distal	3.20985	5.31654	HepG2	PPIG
chr11	61183162	61183213	-	CDS,intron-Distal	3.23090	7.88565	HepG2	GRWD1
chr11	61187250	61187351	-	intron-Distal,intron-Proximal	3.39509	3.85148	K562	GTF2F1
chr11	61183043	61183094	-	intron-Distal,intron-Proximal	4.74286	5.07478	HepG2	U2AF2
chr11	61188730	61188747	-	intron-Distal,intron-Proximal	4.40444	12.33634	K562	PRPF8
chr11	61188747	61188772	-	intron-Distal,intron-Proximal	3.08059	4.95232	K562	PRPF8
chr11	61188359	61188399	-	intron-Distal,intron-Proximal	3.42847	3.20348	K562	PRPF8
chr11	61188774	61188823	-	intron-Distal,intron-Proximal	4.73573	8.31167	HepG2	BUD13
chr11	61196826	61196916	-	intron-Distal,intron-Proximal	3.74532	16.94827	HepG2	FAM120A
chr11	61188755	61188837	-	intron-Distal,intron-Proximal	4.44145	5.39582	HepG2	RBM22
chr11	61183094	61183134	-	intron-Distal,intron-Proximal	4.78459	5.26064	K562	AQR
chr11	61188790	61188816	-	intron-Distal,intron-Proximal	5.24336	7.23718	K562	AQR
chr11	61179126	61179158	-	intron-Distal,intron-Proximal	4.29620	4.11693	K562	BUD13
chr11	61196825	61196907	-	intron-Distal,intron-Proximal	3.94301	7.14855	HepG2	RBFOX2
chr11	61196833	61196896	-	intron-Distal,intron-Proximal	4.75667	4.06667	K562	GTF2F1
chr11	61183533	61183553	-	intron-Distal,intron-Proximal	5.65925	8.72621	HepG2	PRPF8
chr11	61188364	61188456	-	intron-Distal,intron-Proximal	3.51485	5.38982	HepG2	PRPF4
chr11	61188056	61188116	-	intron-Distal,intron-Proximal	4.18183	8.87128	HepG2	SF3B4
chr11	61188773	61188829	-	intron-Distal,intron-Proximal	5.34284	13.79836	HepG2	EFTUD2
chr11	61183411	61183493	-	intron-Distal,intron-Proximal	3.51206	4.76825	K562	KHSRP
chr11	61188816	61188862	-	intron-Distal,intron-Proximal	4.48151	13.92114	K562	AQR
chr11	61183993	61184036	-	intron-Distal,intron-Proximal	4.23016	6.11702	K562	SF3B4
chr11	61187892	61187940	-	intron-Distal,intron-Proximal	4.22908	9.40826	K562	AQR
chr11	61187307	61187337	-	intron-Distal,intron-Proximal	4.56086	4.09264	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CPSF7 is not avaliable on ENCORE database.

Diffrential Expression

2,477 differentially expressed genes after Knockdown/Knockout CPSF7 protein.

79 RBPs can affect the levels of CPSF7.

2,477 differentially expressed genes after Knockdown/Knockout CPSF7 protein :

Only display 100 entries as example. Please click "View All" button to see all 2,477 entries.

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SEMA3F	ENSG00000001617.7	484.27640	661.97640	-0.45090	3.34510	2.12720	HepG2	CPSF7
LAP3	ENSG00000002549.8	2538.87240	1699.46320	0.57900	8.34010	6.52270	HepG2	CPSF7
CD99	ENSG00000002586.13	4091.04580	3282.04040	0.31780	3.14390	1.96560	HepG2	CPSF7
TFPI	ENSG00000003436.10	20329.35370	11321.46800	0.84440	22.41540	19.68560	HepG2	CPSF7
SLC7A2	ENSG00000003989.12	4471.43000	5373.60790	-0.26520	2.83050	1.71320	HepG2	CPSF7
PLXND1	ENSG00000004399.8	3734.06330	2561.17670	0.54380	7.63980	5.89760	HepG2	CPSF7
KDM1A	ENSG00000004487.11	2230.41740	3124.43430	-0.48630	6.37880	4.75760	HepG2	CPSF7
LIG3	ENSG00000005156.7	705.86860	955.97690	-0.43760	3.39330	2.17020	HepG2	CPSF7
ACSM3	ENSG00000005187.7	498.57060	927.16320	-0.89500	12.29520	10.16250	HepG2	CPSF7
ABCB4	ENSG00000005471.11	1152.92080	681.14830	0.75920	10.66050	8.65830	HepG2	CPSF7
RHBDD2	ENSG00000005486.12	911.66690	614.77740	0.56830	4.01650	2.69210	HepG2	CPSF7
ITGAL	ENSG00000005844.13	57.90340	97.66060	-0.75410	2.34660	1.32960	HepG2	CPSF7
CX3CL1	ENSG00000006210.6	3561.37120	2728.51730	0.38420	2.78460	1.67670	HepG2	CPSF7
SPATA20	ENSG00000006282.15	958.33160	1256.09660	-0.39040	3.58590	2.33090	HepG2	CPSF7
TNFRSF12A	ENSG00000006327.9	1060.95160	498.85900	1.08860	17.23050	14.77630	HepG2	CPSF7
BAIAP2L1	ENSG00000006453.9	972.44060	739.62030	0.39470	3.21860	2.02500	HepG2	CPSF7
IFRD1	ENSG00000006652.9	1028.42690	686.41360	0.58320	4.57060	3.17550	HepG2	CPSF7
PROM1	ENSG00000007062.7	628.55680	452.12880	0.47520	3.66970	2.39960	HepG2	CPSF7
ADAM22	ENSG00000008277.10	184.42140	274.26240	-0.57260	2.52710	1.46990	HepG2	CPSF7
CYB561	ENSG00000008283.11	27.79560	62.20340	-1.16210	2.47400	1.43060	HepG2	CPSF7
SPAG9	ENSG00000008294.16	2617.74920	3279.18850	-0.32500	3.64700	2.38100	HepG2	CPSF7
AASS	ENSG00000008311.10	264.86970	588.08000	-1.15070	14.59700	12.31710	HepG2	CPSF7
ST3GAL1	ENSG00000008513.10	1069.00730	1348.94680	-0.33560	3.11680	1.94380	HepG2	CPSF7
PKD1	ENSG00000008710.13	1959.89360	1070.23610	0.87270	2.80080	1.68810	HepG2	CPSF7
MAPK8IP2	ENSG00000008735.10	53.28410	102.83770	-0.94860	3.06840	1.90740	HepG2	CPSF7
UBE3C	ENSG00000009335.13	1426.72410	1164.02840	0.29350	2.46300	1.42300	HepG2	CPSF7
REV3L	ENSG00000009413.11	1047.08900	1352.79890	-0.36960	2.87600	1.74930	HepG2	CPSF7
VTA1	ENSG00000009844.11	1341.76360	1712.54150	-0.35200	3.13350	1.95730	HepG2	CPSF7
MLXIPL	ENSG00000009950.11	3661.47570	4447.91590	-0.28070	2.80180	1.68870	HepG2	CPSF7
NCAPD2	ENSG00000010292.8	3007.30710	4078.95850	-0.43970	5.87250	4.30000	HepG2	CPSF7
PHF7	ENSG00000010318.15	204.95420	116.15730	0.81910	3.58620	2.33100	HepG2	CPSF7
SEMA3G	ENSG00000010319.2	1281.22930	682.45480	0.90860	5.35950	3.85790	HepG2	CPSF7
IDS	ENSG00000010404.13	1386.49510	902.24800	0.61970	7.74990	5.99260	HepG2	CPSF7
SCMH1	ENSG00000010803.12	1298.04460	1615.94140	-0.31600	2.46060	1.42100	HepG2	CPSF7
FYN	ENSG00000010810.13	736.04460	568.21190	0.37330	2.70020	1.60800	HepG2	CPSF7
HIVEP2	ENSG00000010818.4	2461.20930	1343.62360	0.87310	16.93240	14.50360	HepG2	CPSF7
LYPLA2	ENSG00000011009.6	1886.36610	1308.38680	0.52770	4.76490	3.34110	HepG2	CPSF7
CLCN6	ENSG00000011021.17	1639.55090	2100.86810	-0.35770	2.45660	1.41800	HepG2	CPSF7
ANLN	ENSG00000011426.6	1840.96020	2950.80970	-0.68070	4.00680	2.68400	HepG2	CPSF7
ERCC1	ENSG00000012061.11	827.45550	538.11960	0.62070	5.70350	4.15830	HepG2	CPSF7
UBR7	ENSG00000012963.9	403.53810	562.21340	-0.47840	3.53300	2.28780	HepG2	CPSF7
MAN2B2	ENSG00000013288.4	937.50390	713.64230	0.39350	3.03610	1.88060	HepG2	CPSF7
MVP	ENSG00000013364.14	1173.14660	686.01670	0.77400	10.48820	8.50060	HepG2	CPSF7
RWDD2A	ENSG00000013392.6	197.62790	319.10600	-0.69120	4.47450	3.09080	HepG2	CPSF7
TACC3	ENSG00000013810.14	1068.90660	1565.19200	-0.55020	6.54200	4.90600	HepG2	CPSF7
ZC3H3	ENSG00000014164.6	692.91350	495.19960	0.48460	3.11120	1.93990	HepG2	CPSF7
SLC30A9	ENSG00000014824.9	1074.47700	1357.44910	-0.33730	2.59890	1.52670	HepG2	CPSF7
CCDC88C	ENSG00000015133.14	447.71550	612.98130	-0.45330	3.12810	1.95300	HepG2	CPSF7
DPEP1	ENSG00000015413.5	121.70870	237.70980	-0.96580	5.97600	4.39090	HepG2	CPSF7
SLC38A5	ENSG00000017483.10	1677.98820	972.48030	0.78690	3.52750	2.28370	HepG2	CPSF7
WWTR1	ENSG00000018408.10	3932.59580	2686.14260	0.54980	8.56880	6.73210	HepG2	CPSF7
CYP24A1	ENSG00000019186.5	461.89490	199.91350	1.20810	6.95140	5.27270	HepG2	CPSF7
CD74	ENSG00000019582.10	2725.71290	2148.90020	0.34290	3.61000	2.35040	HepG2	CPSF7
PLEKHB1	ENSG00000021300.9	2914.32690	2014.76130	0.53250	7.65130	5.90540	HepG2	CPSF7
SERPINB1	ENSG00000021355.8	1931.84800	1230.38780	0.65080	10.07850	8.12530	HepG2	CPSF7
CPS1	ENSG00000021826.10	851.32190	1296.05100	-0.60630	7.35030	5.63700	HepG2	CPSF7
C8B	ENSG00000021852.8	406.93800	191.80800	1.08500	9.69100	7.76650	HepG2	CPSF7
ERP44	ENSG00000023318.7	2047.61040	1470.09320	0.47790	5.91930	4.34060	HepG2	CPSF7
SNAPC1	ENSG00000023608.4	97.60790	187.76340	-0.94380	4.56700	3.17240	HepG2	CPSF7
ABCC2	ENSG00000023839.6	8751.82840	6188.56100	0.49990	7.55470	5.81790	HepG2	CPSF7
DEPDC1	ENSG00000024526.12	368.75980	683.74500	-0.89080	5.48160	3.96200	HepG2	CPSF7
TOMM34	ENSG00000025772.7	1843.09060	1494.60930	0.30230	2.59250	1.52300	HepG2	CPSF7
RNASET2	ENSG00000026297.11	6177.34060	3240.96980	0.93050	6.27130	4.66000	HepG2	CPSF7
BTN3A1	ENSG00000026950.12	320.67570	465.46700	-0.53760	3.75900	2.47560	HepG2	CPSF7
SNX1	ENSG00000028528.10	3022.17790	2521.95790	0.26090	2.35220	1.33370	HepG2	CPSF7
HMGB3	ENSG00000029993.10	414.20300	1086.34730	-1.39110	11.05060	9.01780	HepG2	CPSF7
SARS	ENSG00000031698.8	2665.46860	1906.46580	0.48340	6.80140	5.13990	HepG2	CPSF7
RANBP3	ENSG00000031823.10	2698.88040	1886.33550	0.51670	6.57560	4.93150	HepG2	CPSF7
PNPLA6	ENSG00000032444.11	993.50770	691.99900	0.52170	4.27950	2.91860	HepG2	CPSF7
ZCCHC8	ENSG00000033030.9	920.22450	715.28520	0.36340	3.10850	1.93890	HepG2	CPSF7
CHPF2	ENSG00000033100.10	962.51220	643.59330	0.58060	2.89710	1.76670	HepG2	CPSF7
ATP6V0A1	ENSG00000033627.10	1921.96320	1487.77080	0.36930	3.35960	2.14020	HepG2	CPSF7
MAP2K3	ENSG00000034152.14	1352.60450	968.55170	0.48170	4.76890	3.34370	HepG2	CPSF7
TMSB10	ENSG00000034510.4	10312.39760	5195.58600	0.98890	28.10770	25.22580	HepG2	CPSF7
RNF19A	ENSG00000034677.7	1920.48260	1483.16230	0.37270	3.30520	2.09540	HepG2	CPSF7
PEX3	ENSG00000034693.10	288.19960	431.42060	-0.58200	4.03420	2.70820	HepG2	CPSF7
TIMP2	ENSG00000035862.8	2145.29150	1431.41740	0.58360	8.44380	6.61960	HepG2	CPSF7
RFC1	ENSG00000035928.10	2077.48650	3300.39560	-0.66780	11.43920	9.37130	HepG2	CPSF7
VCAN	ENSG00000038427.11	1148.84510	1749.23330	-0.60650	2.56990	1.50440	HepG2	CPSF7
CDH1	ENSG00000039068.14	897.19950	633.89600	0.50110	3.98390	2.66450	HepG2	CPSF7
FAM65A	ENSG00000039523.13	1798.26630	1419.34150	0.34130	3.34450	2.12690	HepG2	CPSF7
SPDL1	ENSG00000040275.12	318.71710	488.04090	-0.61470	3.13390	1.95740	HepG2	CPSF7
PQLC2	ENSG00000040487.8	318.22700	200.04110	0.66970	3.23350	2.03610	HepG2	CPSF7
PSMA4	ENSG00000041357.11	1302.53220	1673.75200	-0.36180	3.01570	1.86350	HepG2	CPSF7
TDP1	ENSG00000042088.9	409.74500	545.01380	-0.41160	2.43810	1.40440	HepG2	CPSF7
RETSAT	ENSG00000042445.9	2202.96610	1719.33360	0.35750	3.29220	2.08510	HepG2	CPSF7
HSPA5	ENSG00000044574.7	30187.72740	22571.34160	0.41940	6.52740	4.89220	HepG2	CPSF7
DSG2	ENSG00000046604.8	4851.10180	3828.71330	0.34140	3.86200	2.56020	HepG2	CPSF7
CP	ENSG00000047457.9	49290.14940	29293.86380	0.75060	18.40680	15.86610	HepG2	CPSF7
MAP4	ENSG00000047849.17	8375.33260	6302.16350	0.41020	5.47400	3.95630	HepG2	CPSF7
FAM120A	ENSG00000048828.12	2825.77650	2339.55720	0.27230	2.39900	1.37190	HepG2	CPSF7
ERCC8	ENSG00000049167.9	157.40870	240.48980	-0.61150	2.66000	1.57680	HepG2	CPSF7
RCN1	ENSG00000049449.4	1449.77380	1165.82210	0.31440	2.86900	1.74330	HepG2	CPSF7
CLPTM1L	ENSG00000049656.9	1224.78680	962.49520	0.34760	2.60910	1.53610	HepG2	CPSF7
BCAR1	ENSG00000050820.12	3123.74890	1816.42800	0.78210	14.88080	12.57200	HepG2	CPSF7
HERPUD1	ENSG00000051108.10	2686.65540	1594.37230	0.75270	9.40790	7.50010	HepG2	CPSF7
CYBA	ENSG00000051523.6	2714.64810	1599.82080	0.76280	4.15180	2.81240	HepG2	CPSF7
TTC17	ENSG00000052841.10	2457.28290	1889.04120	0.37930	3.70660	2.42960	HepG2	CPSF7
AKR7A2	ENSG00000053371.8	428.29020	619.27680	-0.53200	4.58280	3.18600	HepG2	CPSF7
ATP9A	ENSG00000054793.9	2380.35620	1742.95170	0.44950	5.17370	3.69470	HepG2	CPSF7
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

79 RBPs can affect the gene expression of CPSF7 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CPSF7	ENSG00000149532.11	3622.88700	2813.44500	0.36470	2.72850	1.79160	HepG2	ABCF1
CPSF7	ENSG00000149532.11	1881.81760	2669.62360	-0.50450	10.99060	9.77390	HepG2	AUH
CPSF7	ENSG00000149532.11	1183.73690	1623.83710	-0.45610	3.27340	2.29650	HepG2	BCLAF1
CPSF7	ENSG00000149532.11	1725.38710	2224.33470	-0.36650	4.50840	3.55460	HepG2	CALR
CPSF7	ENSG00000149532.11	1861.79170	1390.35930	0.42110	3.50010	2.63690	HepG2	CIRBP
CPSF7	ENSG00000149532.11	1543.72310	1932.05290	-0.32370	5.46210	4.58770	HepG2	CKAP4
CPSF7	ENSG00000149532.11	1005.91650	2316.61670	-1.20350	32.48450	29.36660	HepG2	CPSF7
CPSF7	ENSG00000149532.11	2153.22970	1725.55890	0.31930	2.73580	2.06100	HepG2	DDX21
CPSF7	ENSG00000149532.11	1300.23620	1837.33270	-0.49880	3.72380	2.84200	HepG2	DDX55
CPSF7	ENSG00000149532.11	988.19800	1455.56880	-0.55870	4.49460	3.72300	HepG2	DDX6
CPSF7	ENSG00000149532.11	2110.41080	1848.86220	0.19080	1.88580	1.31000	HepG2	DKC1
CPSF7	ENSG00000149532.11	2650.01590	2134.00010	0.31230	3.06730	1.83100	HepG2	EIF2S2
CPSF7	ENSG00000149532.11	2112.74540	1546.01730	0.45050	3.45920	2.74580	HepG2	EIF4A3
CPSF7	ENSG00000149532.11	1960.86740	2681.15860	-0.45140	4.52300	3.49840	HepG2	EIF4G2
CPSF7	ENSG00000149532.11	3928.09240	3065.03640	0.35780	6.96840	6.08740	HepG2	ETF1
CPSF7	ENSG00000149532.11	1379.54340	1888.37250	-0.45300	5.29410	4.14060	HepG2	EWSR1
CPSF7	ENSG00000149532.11	4175.00900	2477.27400	0.75290	3.45720	2.31830	HepG2	FTO
CPSF7	ENSG00000149532.11	1638.55970	1249.80080	0.39060	2.15420	1.45370	HepG2	FUBP3
CPSF7	ENSG00000149532.11	2047.43840	1560.18400	0.39200	3.06720	2.33880	HepG2	FXR1
CPSF7	ENSG00000149532.11	2300.91300	1447.13250	0.66890	7.35620	6.29490	HepG2	G3BP1
CPSF7	ENSG00000149532.11	1559.08200	1844.96300	-0.24290	2.86530	1.87180	HepG2	HDGF
CPSF7	ENSG00000149532.11	2343.34520	1720.42120	0.44570	5.05760	4.21900	HepG2	HNRNPA1
CPSF7	ENSG00000149532.11	2137.90310	2607.25100	-0.28630	3.62850	2.58230	HepG2	HNRNPA2B1
CPSF7	ENSG00000149532.11	2054.02760	1560.73010	0.39610	3.03470	2.34790	HepG2	MAGOH
CPSF7	ENSG00000149532.11	2301.20580	1606.34020	0.51850	4.76360	3.94610	HepG2	NCBP2
CPSF7	ENSG00000149532.11	2227.33580	1881.65050	0.24320	2.58100	1.76020	HepG2	PARN
CPSF7	ENSG00000149532.11	1859.59130	1446.46300	0.36240	5.41840	4.70710	HepG2	PTBP1
CPSF7	ENSG00000149532.11	2078.94150	2685.32810	-0.36920	3.72470	3.04430	HepG2	PUF60
CPSF7	ENSG00000149532.11	2113.68910	2850.68710	-0.43150	11.04360	10.02530	HepG2	PUM1
CPSF7	ENSG00000149532.11	2239.25250	2848.54720	-0.34720	4.03250	3.22810	HepG2	PUM2
CPSF7	ENSG00000149532.11	2395.01850	1968.36060	0.28290	4.40370	3.66040	HepG2	PUS1
CPSF7	ENSG00000149532.11	2427.50490	2951.74380	-0.28210	2.88800	2.01460	HepG2	RBM15
CPSF7	ENSG00000149532.11	3572.23060	2561.81340	0.47960	9.69590	8.86000	HepG2	RBM22
CPSF7	ENSG00000149532.11	2381.07980	1609.75530	0.56470	12.45970	11.46610	HepG2	NELFE
CPSF7	ENSG00000149532.11	2079.21380	1499.30300	0.47160	8.95270	7.93880	HepG2	RECQL
CPSF7	ENSG00000149532.11	1889.25430	1327.19960	0.50930	6.45570	5.55970	HepG2	RPS19
CPSF7	ENSG00000149532.11	1405.18450	1692.93180	-0.26880	3.49760	2.78840	HepG2	SAFB2
CPSF7	ENSG00000149532.11	1654.86480	1332.07140	0.31290	2.29190	1.43300	HepG2	SERBP1
CPSF7	ENSG00000149532.11	2819.26250	1407.22930	1.00240	3.25630	1.75390	HepG2	SF1
CPSF7	ENSG00000149532.11	2158.99950	2648.10940	-0.29460	2.35030	1.69780	HepG2	SF3B1
CPSF7	ENSG00000149532.11	2143.42240	2575.00160	-0.26470	4.05270	3.22690	HepG2	SLBP
CPSF7	ENSG00000149532.11	2407.14410	2893.49190	-0.26550	3.88870	3.32500	HepG2	SRFBP1
CPSF7	ENSG00000149532.11	3921.91930	1571.86440	1.31900	79.63190	77.89270	HepG2	SRSF1
CPSF7	ENSG00000149532.11	3584.79450	2651.48160	0.43500	10.20520	9.10450	HepG2	SRSF5
CPSF7	ENSG00000149532.11	2327.23770	2703.13980	-0.21600	2.39370	1.74270	HepG2	SRSF7
CPSF7	ENSG00000149532.11	3941.99510	2512.26750	0.64980	22.53570	21.37930	HepG2	SSB
CPSF7	ENSG00000149532.11	1242.51530	1918.01810	-0.62640	9.94590	8.26510	HepG2	SUPT6H
CPSF7	ENSG00000149532.11	1372.92740	1829.07750	-0.41390	2.78770	2.10850	HepG2	SUPV3L1
CPSF7	ENSG00000149532.11	1766.25040	1412.89970	0.32190	3.63850	3.01070	HepG2	TAF15
CPSF7	ENSG00000149532.11	3874.21080	2157.56130	0.84440	4.71870	3.35590	HepG2	TBRG4
CPSF7	ENSG00000149532.11	942.53770	1225.99160	-0.37930	2.43520	1.49280	HepG2	TFIP11
CPSF7	ENSG00000149532.11	1561.72790	1863.73030	-0.25500	3.11560	2.52520	HepG2	TRIM56
CPSF7	ENSG00000149532.11	2981.64900	2429.98490	0.29510	2.14820	1.58790	HepG2	U2AF1
CPSF7	ENSG00000149532.11	2032.14500	2777.14260	-0.45060	3.56490	2.60900	HepG2	UBE2L3
CPSF7	ENSG00000149532.11	2425.10500	2818.57140	-0.21690	2.96150	2.40180	HepG2	ZNF622
CPSF7	ENSG00000149532.11	3994.64040	3393.98650	0.23500	3.34360	2.73120	K562	AGGF1
CPSF7	ENSG00000149532.11	5600.96550	3520.97860	0.66960	11.30610	10.23740	K562	AQR
CPSF7	ENSG00000149532.11	2090.17930	2436.48200	-0.22120	2.83610	1.86420	K562	BCLAF1
CPSF7	ENSG00000149532.11	1377.55910	2300.87370	-0.74010	4.41860	2.00240	K562	CPSF7
CPSF7	ENSG00000149532.11	1544.60590	1848.43480	-0.25910	2.37800	1.40770	K562	CSTF2
CPSF7	ENSG00000149532.11	5857.87230	4397.71000	0.41350	6.78080	5.82580	K562	DDX47
CPSF7	ENSG00000149532.11	3410.73450	2189.41280	0.63940	4.39190	3.09790	K562	EIF3A
CPSF7	ENSG00000149532.11	3112.86930	2426.04180	0.35950	2.58110	1.58390	K562	EIF3D
CPSF7	ENSG00000149532.11	2427.73660	1739.32030	0.48100	8.21170	6.84530	K562	EIF3G
CPSF7	ENSG00000149532.11	2250.11880	1750.07080	0.36250	3.37120	2.46840	K562	EIF4A3
CPSF7	ENSG00000149532.11	1855.91610	1527.60990	0.28080	2.79750	1.49910	K562	EWSR1
CPSF7	ENSG00000149532.11	2113.67680	1651.01240	0.35630	4.27470	2.03140	K562	FUBP3
CPSF7	ENSG00000149532.11	2869.34090	1819.99360	0.65670	16.30780	14.94620	K562	FXR1
CPSF7	ENSG00000149532.11	3432.82360	4657.79540	-0.44030	6.11510	4.98530	K562	GRSF1
CPSF7	ENSG00000149532.11	3144.06560	2352.30090	0.41850	5.38750	4.58060	K562	HNRNPC
CPSF7	ENSG00000149532.11	2664.87260	2100.41390	0.34330	3.65600	2.32530	K562	HNRNPF
CPSF7	ENSG00000149532.11	4808.42020	3974.02150	0.27490	2.68860	1.65010	K562	HNRNPL
CPSF7	ENSG00000149532.11	3075.68420	2277.32340	0.43350	5.12300	3.14350	K562	LARP7
CPSF7	ENSG00000149532.11	3071.58900	2385.35650	0.36470	3.14390	1.56520	K562	LIN28B
CPSF7	ENSG00000149532.11	2917.55790	2296.42700	0.34530	3.45000	1.83370	K562	PHF6
CPSF7	ENSG00000149532.11	3723.53890	4554.70900	-0.29070	2.39430	1.63350	K562	PPIG
CPSF7	ENSG00000149532.11	2692.03850	2204.95510	0.28780	2.20010	1.52730	K562	PRPF8
CPSF7	ENSG00000149532.11	6324.25070	5249.57200	0.26860	2.60890	1.81710	K562	PUF60
CPSF7	ENSG00000149532.11	4305.31180	3502.58740	0.29760	2.61590	2.08460	K562	PUS1
CPSF7	ENSG00000149532.11	4221.91170	3412.53940	0.30700	2.87230	2.26960	K562	RBM15
CPSF7	ENSG00000149532.11	2651.23190	2079.50280	0.35030	3.23690	2.32150	K562	RBM22
CPSF7	ENSG00000149532.11	2368.85820	1923.95700	0.30000	3.07430	2.02250	K562	RCC2
CPSF7	ENSG00000149532.11	3986.94070	2995.44980	0.41240	5.16410	3.68730	K562	SAFB
CPSF7	ENSG00000149532.11	3504.48390	2112.82060	0.72990	2.87290	1.63820	K562	SF1
CPSF7	ENSG00000149532.11	4295.64940	2427.11220	0.82350	3.99120	2.41710	K562	SNRNP200
CPSF7	ENSG00000149532.11	2391.48340	1823.88680	0.39080	3.92290	2.63500	K562	SRFBP1
CPSF7	ENSG00000149532.11	4299.95900	3708.70120	0.21330	3.54710	2.50380	K562	SRPK2
CPSF7	ENSG00000149532.11	3770.85800	2126.46310	0.82630	19.63170	17.74600	K562	SRSF1
CPSF7	ENSG00000149532.11	1641.16680	2134.84580	-0.37940	2.75650	1.74290	K562	SUPV3L1
CPSF7	ENSG00000149532.11	4733.62490	3371.78190	0.48930	4.77320	3.68860	K562	SYNCRIP
CPSF7	ENSG00000149532.11	2711.17720	2151.96210	0.33320	2.74370	2.03850	K562	TARDBP
CPSF7	ENSG00000149532.11	2386.22810	1881.54420	0.34270	3.92100	2.96600	K562	U2AF2
CPSF7	ENSG00000149532.11	4485.71370	3461.26770	0.37390	6.27630	5.05380	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CPSF7 is not available on ENCORE database.

39 RBPs can affect the splicing of CPSF7 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CPSF7	ENSG00000149532.11	chr11	-	61188663	61188729			61187941	61188045	61188861	61189080	0.12700	0.00001	0.00236	included	HepG2	G3BP1
SE	CPSF7	ENSG00000149532.11	chr11	-	61187941	61188045			61187393	61187566	61188861	61189080	-0.12400	0.00281	0.04752	excluded	K562	SF3B4
SE	CPSF7	ENSG00000149532.11	chr11	-	61188663	61188729			61187941	61188045	61188861	61189080	-0.09900	0.00000	0.00011	excluded	HepG2	U2AF1
SE	CPSF7	ENSG00000149532.11	chr11	-	61188663	61188729			61187941	61188045	61188861	61189014	-0.05500	0.00151	0.04348	excluded	K562	AKAP8L
SE	CPSF7	ENSG00000149532.11	chr11	-	61188663	61188729			61187941	61188045	61188861	61189080	0.05900	0.00017	0.05038	included	K562	WDR43
SE	CPSF7	ENSG00000149532.11	chr11	-	61187941	61188045			61187420	61187566	61188861	61189080	-0.11400	0.00493	0.09466	excluded	HepG2	HNRNPK
SE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188602			61187941	61188045	61188861	61189080	-0.27800	0.00001	0.00022	excluded	HepG2	U2AF2
SE	CPSF7	ENSG00000149532.11	chr11	-	61187941	61188045			61183768	61183991	61188861	61189025	-0.14300	0.00000	0.00001	excluded	K562	AQR
SE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188599			61187941	61188045	61188861	61189014	-0.13300	0.00025	0.04548	excluded	K562	DROSHA
SE	CPSF7	ENSG00000149532.11	chr11	-	61188663	61188729			61187941	61188045	61188861	61189080	-0.06600	0.00001	0.00027	excluded	K562	PUS1
SE	CPSF7	ENSG00000149532.11	chr11	-	61188663	61188729			61187941	61188045	61188861	61189080	0.06800	0.00006	0.01483	included	K562	NSUN2
SE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188599			61187941	61188045	61188861	61189080	-0.14200	0.00042	0.06441	excluded	K562	LARP4
SE	CPSF7	ENSG00000149532.11	chr11	-	61181212	61181458			61179240	61179409	61183137	61183256	0.05400	0.00154	0.05777	included	HepG2	MATR3
SE	CPSF7	ENSG00000149532.11	chr11	-	61188663	61188729			61187941	61188045	61188861	61189080	0.07600	0.00287	0.09217	included	HepG2	MATR3
SE	CPSF7	ENSG00000149532.11	chr11	-	61187941	61188045			61187393	61187566	61188861	61189080	-0.15000	0.00003	0.00260	excluded	K562	TARDBP
SE	CPSF7	ENSG00000149532.11	chr11	-	61188663	61188729			61187941	61188045	61188861	61189080	-0.07100	0.00000	0.00012	excluded	K562	RBM15
SE	CPSF7	ENSG00000149532.11	chr11	-	61187941	61188045			61187420	61187566	61188861	61189080	-0.14300	0.00008	0.00628	excluded	K562	HNRNPK
A3SS	CPSF7	ENSG00000149532.11	chr11	-	61178478	61178726			61178478	61178577	61179240	61179409	0.08300	0.00000	0.00000	longer	K562	AQR
A3SS	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187598			61187393	61187566	61187941	61188045	0.11400	0.00000	0.00000	longer	K562	AQR
A3SS	CPSF7	ENSG00000149532.11	chr11	-	61188861	61189110			61188861	61189080	61196653	61196811	0.20300	0.00000	0.00000	longer	K562	AQR
A3SS	CPSF7	ENSG00000149532.11	chr11	-	61183900	61184128			61183900	61183991	61187420	61187598	0.24000	0.00000	0.00000	longer	K562	AQR
A3SS	CPSF7	ENSG00000149532.11	chr11	-	61188861	61189110			61188861	61189025	61196653	61196762	-0.05100	0.00017	0.02626	shorter	K562	HNRNPC
A5SS	CPSF7	ENSG00000149532.11	chr11	-	61187941	61189080			61188861	61189080	61187393	61187566	-0.29800	0.00018	0.03844	shorter	K562	TARDBP
A5SS	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187598			61187420	61187598	61183763	61183991	0.27100	0.00223	0.03695	longer	K562	AQR
A5SS	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566			61187420	61187566	61183576	61183991	0.17900	0.00134	0.04942	longer	HepG2	U2AF2
A5SS	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566			61187420	61187566	61183763	61183991	0.24800	0.00002	0.00473	longer	HepG2	RBM22
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.20100	0.00000	0.00000	included	HepG2	HNRNPL
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.13800	0.00001	0.01683	included	HepG2	LIN28B
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.10600	0.00006	0.00538	included	HepG2	BCCIP
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.09800	0.00011	0.01348	included	HepG2	DDX3X
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.18400	0.00000	0.00010	included	HepG2	UCHL5
RI	CPSF7	ENSG00000149532.11	chr11	-	61183576	61183991			61183576	61183634	61183835	61183991	0.05200	0.00002	0.00561	included	HepG2	PRPF4
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.07700	0.00217	0.06514	included	HepG2	TIA1
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.09500	0.00055	0.03974	included	HepG2	SUPV3L1
RI	CPSF7	ENSG00000149532.11	chr11	-	61187941	61189080			61187941	61188045	61188861	61189080	0.07400	0.00083	0.06160	included	HepG2	EFTUD2
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.20000	0.00000	0.00000	included	HepG2	IGF2BP3
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.15000	0.00000	0.00007	included	HepG2	MATR3
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.28900	0.00000	0.00000	included	HepG2	SRSF1
RI	CPSF7	ENSG00000149532.11	chr11	-	61187941	61189080			61187941	61188045	61188861	61189080	0.11300	0.00007	0.00138	included	HepG2	QKI
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.09700	0.00026	0.00434	included	HepG2	QKI
RI	CPSF7	ENSG00000149532.11	chr11	-	61187941	61189080			61187941	61188045	61188861	61189080	0.07000	0.00092	0.02274	included	K562	RBM22
RI	CPSF7	ENSG00000149532.11	chr11	-	61187941	61189080			61187941	61188045	61188861	61189080	0.08300	0.00235	0.02433	included	HepG2	TAF15
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.20400	0.00000	0.00000	included	HepG2	TAF15
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	-0.07400	0.00055	0.04469	excluded	K562	KHSRP
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.25400	0.00000	0.00000	included	HepG2	G3BP1
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.07900	0.00169	0.03430	included	HepG2	KHSRP
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	-0.05100	0.00000	0.00082	excluded	K562	XRCC6
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.19000	0.00000	0.00000	included	HepG2	NCBP2
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.20100	0.00000	0.00000	included	HepG2	RBM22
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.08400	0.00137	0.04755	included	HepG2	XRN2
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	0.13000	0.00001	0.00260	included	HepG2	SSB
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	-0.10700	0.00000	0.00000	excluded	K562	PTBP1
RI	CPSF7	ENSG00000149532.11	chr11	-	61183137	61183991			61183137	61183256	61183576	61183991	-0.06000	0.00005	0.00154	excluded	K562	FXR1
MXE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188602	61188663	61188729	61187941	61188045	61188861	61189080	0.34300	0.00089	0.05618	1included	K562	LARP4
MXE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188599	61188663	61188729	61187941	61188045	61188861	61189080	0.38200	0.00124	0.07012	1included	K562	LARP4
MXE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188602	61188663	61188729	61187941	61188045	61188861	61189080	0.62200	0.00000	0.00524	1included	K562	NSUN2
MXE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188599	61188663	61188729	61187941	61188045	61188861	61189080	0.61300	0.00002	0.01201	1included	K562	NSUN2
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187420	61187598	61187941	61188084	61183768	61183991	61188861	61189080	0.17500	0.00070	0.00666	1included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566	61188861	61189110	61183936	61183991	61196653	61196762	0.19400	0.00000	0.00000	1included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566	61188861	61189025	61183936	61183991	61196653	61196762	0.10900	0.00760	0.05067	1included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566	61188861	61189053	61183936	61183991	61196653	61196762	0.12400	0.00010	0.00123	1included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187420	61187566	61188861	61189025	61183835	61183991	61196653	61196762	0.29600	0.00005	0.00059	1included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187420	61187566	61188861	61189110	61183835	61183991	61196653	61196762	0.38500	0.00000	0.00000	1included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187420	61187566	61188861	61189053	61183835	61183991	61196653	61196762	0.29000	0.00000	0.00001	1included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187598	61187941	61188045	61183576	61183991	61188861	61189080	-0.15000	0.00042	0.00430	2included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566	61188861	61189080	61183936	61183991	61196653	61196762	-0.14400	0.00012	0.00144	2included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566	61187941	61188045	61183576	61183991	61188861	61189080	-0.15400	0.00040	0.00407	2included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566	61187941	61189080	61183649	61183991	61196653	61196762	-0.16400	0.00002	0.00027	2included	K562	AQR
MXE	CPSF7	ENSG00000149532.11	chr11	-	61187393	61187566	61187941	61188045	61183576	61183991	61188861	61189080	-0.14200	0.00142	0.03510	2included	K562	TARDBP
MXE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188602	61188663	61188729	61187941	61188045	61188861	61189080	0.59600	0.00005	0.01840	1included	K562	UPF1
MXE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188599	61188663	61188729	61187941	61188045	61188861	61189080	0.61800	0.00007	0.02233	1included	K562	UPF1
MXE	CPSF7	ENSG00000149532.11	chr11	-	61188525	61188599	61188663	61188729	61187941	61188045	61188861	61189080	0.26200	0.00813	0.08463	1included	K562	HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
CPSF7	Product_ID: A301-360A Lot_ID: 1 Source: Bethyl Labs Target Name: CPSF7-human
CPSF7	Product_ID: A300-930A Lot_ID: 1 Source: Bethyl Labs Target Name: CPSF7-human

CPSF7

General Information

Functions

Localization(RBPImage: CPSF7)

Domains (AlphaFold: CPSF7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CPSF7 is not avaliable on ENCORE database.

33 proteins are bound to CPSF7 RNA:

eCLIP assay for CPSF7 is not avaliable on ENCORE database.

Diffrential Expression

2,477 differentially expressed genes after Knockdown/Knockout CPSF7 protein :

79 RBPs can affect the gene expression of CPSF7 :

The Knockdown/knockout RNA-Seq assay for CPSF7 is not available on ENCORE database.

39 RBPs can affect the splicing of CPSF7 :

The Knockdown/knockout RNA-Seq assay for CPSF7 is not avaliable on ENCORE database.