CD99

General Information

Gene Name       : CD99
Gene ID             : ENSG00000002586.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CD99)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CD99ENSG00000002586.1993.73104.9799.35ENCSR000AEF
HepG2CD99ENSG00000002586.19201.36148.82175.09ENCSR985KAT
K562CD99ENSG00000002586.1930.0427.0328.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CD99 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CD99 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CD99 is not avaliable on ENCORE database.






NO known proteins are bound to CD99 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CD99 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CD99 is not available on ENCORE database.

  • 97 RBPs can affect the levels of CD99.  








The Knockdown/knockout RNA-Seq assay for CD99 is not available on ENCORE database.





97 RBPs can affect the gene expression of CD99 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CD99ENSG00000002586.132860.734702394.197100.256703.990903.28570HepG2ACO1
CD99ENSG00000002586.133012.546603755.73160-0.318102.049301.58380HepG2AKAP1
CD99ENSG00000002586.131319.936402655.64510-1.0086021.3652019.94420HepG2BOP1
CD99ENSG00000002586.133668.549202986.006800.296902.680501.46980HepG2BUD13
CD99ENSG00000002586.133898.328702952.331500.400903.727102.83890HepG2CIRBP
CD99ENSG00000002586.131110.930002087.77110-0.910207.807106.53280HepG2CNOT7
CD99ENSG00000002586.133864.843802437.973500.6646010.123608.88810HepG2CPSF6
CD99ENSG00000002586.134091.045803282.040400.317803.143901.96560HepG2CPSF7
CD99ENSG00000002586.131877.899401542.186000.284003.189002.09560HepG2YBX3
CD99ENSG00000002586.134121.849802851.799500.5313010.863509.75500HepG2CELF1
CD99ENSG00000002586.133556.924603066.184900.214103.665502.83200HepG2DAZAP1
CD99ENSG00000002586.131940.936201544.325400.329704.067302.68360HepG2DDX1
CD99ENSG00000002586.132616.572201839.079800.508606.439105.45240HepG2DDX21
CD99ENSG00000002586.132696.278503597.51020-0.416003.633902.92750HepG2DDX3X
CD99ENSG00000002586.134542.219902768.515700.714204.529703.28850HepG2DDX59
CD99ENSG00000002586.131985.694401460.541000.443004.759803.48930HepG2DHX30
CD99ENSG00000002586.132283.523001514.293600.5925012.3024010.90630HepG2DNAJC21
CD99ENSG00000002586.133121.334502144.501000.541406.202004.87410HepG2EEF2
CD99ENSG00000002586.134261.342802970.800300.520405.588804.76270HepG2EIF2S1
CD99ENSG00000002586.131380.761401740.77640-0.334302.200201.38450HepG2EIF3D
CD99ENSG00000002586.132215.680503025.15170-0.449309.152907.79820HepG2EIF4G1
CD99ENSG00000002586.132786.296503249.66920-0.221902.717902.12160HepG2ETF1
CD99ENSG00000002586.131315.521901752.96930-0.414204.238802.86740HepG2FASTKD2
CD99ENSG00000002586.131578.075302442.26340-0.630102.487101.52780HepG2FTO
CD99ENSG00000002586.132567.871103312.94180-0.367503.001802.27970HepG2FXR1
CD99ENSG00000002586.132469.301103072.88560-0.315502.147001.55850HepG2G3BP1
CD99ENSG00000002586.131973.392901549.912600.348402.804401.89950HepG2GEMIN5
CD99ENSG00000002586.132887.615501528.801200.9174014.8982013.59330HepG2HNRNPA1
CD99ENSG00000002586.132097.183301700.517200.302402.485101.82520HepG2HNRNPC
CD99ENSG00000002586.133221.154002675.189700.267804.009303.16200HepG2HNRNPF
CD99ENSG00000002586.13897.742703112.40090-1.7937057.8607055.08220HepG2HNRNPK
CD99ENSG00000002586.135552.041102637.259401.0739023.6175022.07060HepG2HNRNPLL
CD99ENSG00000002586.133300.861202634.305600.325303.986703.13140HepG2IGF2BP1
CD99ENSG00000002586.132334.913201725.535800.4362010.895609.54580HepG2ILF2
CD99ENSG00000002586.132311.130303314.10150-0.520005.266504.36730HepG2MAGOH
CD99ENSG00000002586.132261.734703332.54070-0.559205.422504.56420HepG2MATR3
CD99ENSG00000002586.134719.975903256.915100.535208.197206.87290HepG2MSI2
CD99ENSG00000002586.132211.274703410.95180-0.625307.150706.15440HepG2NCBP2
CD99ENSG00000002586.133056.560302338.541100.386203.893603.01030HepG2NSUN2
CD99ENSG00000002586.132186.312901672.081200.386804.882103.79530HepG2PARN
CD99ENSG00000002586.131930.753502996.37450-0.6341018.2654016.92750HepG2PCBP1
CD99ENSG00000002586.132278.806401506.695700.5968012.2217010.74100HepG2PPIL4
CD99ENSG00000002586.133936.296102495.756800.6573020.4448018.68590HepG2PRPF4
CD99ENSG00000002586.131583.661401212.948500.384602.310601.56930HepG2PRPF8
CD99ENSG00000002586.132271.818803048.88320-0.424408.642507.78560HepG2PTBP1
CD99ENSG00000002586.132187.755803078.81560-0.492907.847406.74370HepG2PUM2
CD99ENSG00000002586.133076.748802438.627600.335206.560605.68290HepG2PUS1
CD99ENSG00000002586.132800.971803302.10080-0.237502.562401.95740HepG2QKI
CD99ENSG00000002586.131363.328402041.89500-0.582803.168202.41780HepG2RAVER1
CD99ENSG00000002586.132175.163502716.13450-0.320404.310603.70120HepG2RBM22
CD99ENSG00000002586.132968.415703393.14740-0.192902.380801.87230HepG2NELFE
CD99ENSG00000002586.132444.258403160.19560-0.370607.098706.17930HepG2RECQL
CD99ENSG00000002586.132678.282402006.460200.416602.265701.40910HepG2RPS10
CD99ENSG00000002586.131257.566201693.93750-0.429704.684503.90800HepG2RPS19
CD99ENSG00000002586.131054.139001849.15680-0.8108012.1018010.52370HepG2RPS2
CD99ENSG00000002586.132207.881301504.368000.5534014.3021013.00810HepG2SAFB2
CD99ENSG00000002586.134521.725003408.206200.407801.883301.32480HepG2SF3A3
CD99ENSG00000002586.133202.275102610.281300.294802.377601.72140HepG2SF3B1
CD99ENSG00000002586.132610.639303174.35250-0.282104.447103.72450HepG2SF3B4
CD99ENSG00000002586.132308.488701754.338900.395909.108508.04930HepG2SMN1
CD99ENSG00000002586.132635.409603067.79590-0.219203.257402.72770HepG2SRFBP1
CD99ENSG00000002586.132073.048503313.30760-0.6765022.7435021.66950HepG2SRSF1
CD99ENSG00000002586.132309.382202865.78950-0.311404.716603.93600HepG2SRSF5
CD99ENSG00000002586.132308.566902695.52700-0.223603.070702.49480HepG2SRSF9
CD99ENSG00000002586.133142.521102663.611300.238403.541702.97760HepG2SSB
CD99ENSG00000002586.132195.067303259.12590-0.5702017.9230016.56080HepG2SUCLG1
CD99ENSG00000002586.133666.634302717.310700.432205.263803.98700HepG2SUPT6H
CD99ENSG00000002586.13859.947901565.84380-0.864607.782806.74370HepG2SUPV3L1
CD99ENSG00000002586.133152.584002570.899400.294202.376201.69680HepG2TARDBP
CD99ENSG00000002586.132475.881001641.413400.5929010.878209.99970HepG2TIAL1
CD99ENSG00000002586.132520.571601656.120500.6058015.9641014.76270HepG2TRIM56
CD99ENSG00000002586.134209.415503442.729700.290002.100901.54550HepG2U2AF1
CD99ENSG00000002586.131475.057303022.55490-1.0350047.7169045.58430HepG2UPF1
CD99ENSG00000002586.132067.795101433.387400.528602.973601.93170HepG2UPF2
CD99ENSG00000002586.132409.644402918.16250-0.276204.327103.60490HepG2UTP3
CD99ENSG00000002586.132090.872401541.406600.439803.037802.27950HepG2XRN2
CD99ENSG00000002586.135179.616903324.236000.6397031.2151029.88940HepG2ZNF622
CD99ENSG00000002586.131115.98450612.454300.8655018.4511017.10640K562AGGF1
CD99ENSG00000002586.13897.16910673.012500.414603.421402.30310K562AKAP8
CD99ENSG00000002586.13865.94060637.290900.442203.668402.91230K562AKAP8L
CD99ENSG00000002586.13327.61320439.39100-0.423501.812001.31700K562AQR
CD99ENSG00000002586.13231.68380478.23540-1.045609.865608.16610K562BOP1
CD99ENSG00000002586.13709.70030566.710300.324502.732401.63320K562CPEB4
CD99ENSG00000002586.13348.83000245.707100.505503.044601.95070K562DDX3X
CD99ENSG00000002586.131020.22220376.575201.4378038.3245036.26200K562EIF2S2
CD99ENSG00000002586.13347.60910217.084700.679102.799201.78870K562EIF3A
CD99ENSG00000002586.13873.81570412.596701.0825012.3572010.45040K562FIP1L1
CD99ENSG00000002586.13723.75340517.387200.484203.438602.48200K562FMR1
CD99ENSG00000002586.13114.37620226.53010-0.985903.773102.91820K562G3BP2
CD99ENSG00000002586.131257.80080501.847301.3255027.5569025.07630K562GRSF1
CD99ENSG00000002586.13701.17830339.310401.0471010.309808.26320K562HNRNPM
CD99ENSG00000002586.131535.24480559.472401.4562029.9569027.67290K562HSPD1
CD99ENSG00000002586.13955.92980757.639600.335302.522801.66120K562MBNL1
CD99ENSG00000002586.13633.28110473.897500.418202.480801.65580K562METAP2
CD99ENSG00000002586.13656.83690408.313800.685808.546307.20030K562MTPAP
CD99ENSG00000002586.13693.82390468.297800.567002.660401.86010K562PPIG
CD99ENSG00000002586.13814.30330589.294600.466502.986402.13730K562PUF60
CD99ENSG00000002586.13817.27650626.919800.382402.739001.67920K562PUM1
CD99ENSG00000002586.13913.06870614.142400.572106.424804.94390K562PUM2
CD99ENSG00000002586.131157.98320631.986400.873504.924704.22680K562PUS1
CD99ENSG00000002586.13109.72330216.07630-0.977703.691802.01360K562RAVER1
CD99ENSG00000002586.13794.74500615.801400.367902.989302.37740K562RBM15
CD99ENSG00000002586.13609.14640447.640600.444303.698302.76360K562SF3A3
CD99ENSG00000002586.13638.22210461.720500.466902.620501.67460K562SF3B1
CD99ENSG00000002586.13107.48660232.86240-1.115306.594704.97610K562SUPV3L1
CD99ENSG00000002586.13872.07330481.076900.8581015.6808014.13590K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CD99 is not available on ENCORE database.





3 RBPs can affect the splicing of CD99 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECD99ENSG00000002586.13chrX+263564526358152632462263249526377012637746-0.052000.002840.04829excludedHepG2U2AF1
SECD99ENSG00000002586.13chrX+263564526358152632462263249526377012637746-0.052000.000000.00000excludedHepG2U2AF2
A3SSCD99ENSG00000002586.13chrX+2641334264140526413542641405264066726407150.176000.000010.00009longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CD99 is not avaliable on ENCORE database.