FMR1

General Information

Gene Name       : FMR1
Gene ID             : ENSG00000102081.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FMR1)


Antibody Validation

 View validation images for all FMR1 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FMR1ENSG00000102081.1420.3418.1819.26ENCSR000AEF
HepG2FMR1ENSG00000102081.1420.9028.5524.73ENCSR985KAT
K562FMR1ENSG00000102081.1413.5213.7613.64ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 236ENCSR331VNXFMR1K562ReleasedENCAB000BFKENCSR735MBZ  
eCLIPeCLIP: 4030ENCSR554UVBFMR1K562ReleasedENCAB650WPEENCSR856KEU  
knockdown followed by RNA-seq FMR1-BGKLV36-K562ENCSR555LCEFMR1K562ReleasedENCSR424QCW   shRNAKD% = 85.6,76.9
knockdown followed by RNA-seq FMR1-BGHLV23-HepG2ENCSR905HIDFMR1HepG2ReleasedENCSR042QTH   shRNAKD% = 83.7,84.5






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
FMR1236K562ENCSR331VNXENCSR735MBZENCAB000BFKRN016P1ReleasedENCODE3
FMR14030K562ENCSR554UVBENCSR856KEUENCAB650WPEPA5-34584TK2671134ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
FMR1ENCAB000BFKRN016P1Released, ENCODE3BGHLV23-17, Released, ENCODE3BGKLV36-21, Released, ENCODE3
FMR1ENCAB650WPEPA5-34584TK2671134Released, ENCODE4BGHLV23-17, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
FMR1K562shRNABGKLV11-11,BGKLV11-12BGKLV11-1,BGKLV11-2NotSatisfiedENCODE3
FMR1K562shRNABGKLV25-19,BGKLV25-20BGKLV25-1,BGKLV25-20,0.0NotSatisfiedENCODE3
FMR1K562shRNAENCSR555LCEENCSR424QCWFMR1_BGKLV36-21,FMR1_BGKLV36-22NT_BGKLV36-1,NT_BGKLV36-285.6,76.9ReleasedENCODE3
FMR1K562shRNABGKLV36-23,BGKLV36-24BGKLV36-1,BGKLV36-2NotSatisfiedENCODE3
FMR1HepG2shRNAENCSR905HIDENCSR042QTHFMR1-BGHLV23-17,FMR1-BGHLV23-18non-target-BGHLV23-1,non-target-BGHLV23-283.7,84.5ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
FMR1Product_ID: PA5-34584
Lot_ID: TK2671134
Source: Thermo Fisher
Target Name: FMR1-human		 FMR1-HEPG2-PA5-34584.png<br>Caption: Western blot following shRNA against FMR1 in HepG2 whole cell lysate using FMR1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNA against FMR1. FMR1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 ThermoFisher_PA5-34584_TK2671134_FMRP.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the FMR1 specific antibody, PA5-34584. Lanes 1 and 3 are 2.5% of five million whole cell lysate input. Lanes 2 and 4 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the FMR1-specific antibody, PA5-34584. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
FMR1Product_ID: RN016P
Lot_ID: 1
Source: MBLI
Target Name: FMR1-human		 FMR1-HEPG2.png<br>Caption: Western blot following shRNA against FMR1 in HepG2 whole cell lysate using FMR1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against FMR1. FMR1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
 K562_MBLI_RN016P_001_FMR1.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using FMR1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-FMR1 antibody (lanes under 'FMR1').
 FMR1-K562.png<br>Caption: Western blot following shRNA against FMR1 in k562 whole cell lysate using FMR1 specific antibody. Lane 1 is a ladder, lane 2 is k562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against FMR1. FMR1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets
  • FMR1 protein binds to 3,059 RNA regions.  





Proteins bound to RNA
  • FMR1 RNA is bound by 17 proteins.  






FMR1 protein has 3,059 RNA targets:

Only display 100 entries as example. Please click "View All" button to see all 3,059 entries.     

RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
FMR1chr9139733899139733937+3.625127.14100K562RABL63'-UTR,CDS,intron-Distal
FMR1chr14102483230102483254+6.1707516.39325K562DYNC1H1CDS
FMR1chr35812406358124142+5.107428.07480K562FLNBCDS
FMR1chr79969191799691951-3.591985.20807K562MCM73'-UTR,CDS,intron-Distal
FMR1chr159101771991017773+3.167645.08843K562IQGAP1CDS
FMR1chr1715768421576861-4.186817.63447K562PRPF8CDS,intron-Distal
FMR1chr139865472298654794+3.598895.06179K562IPO5CDS
FMR1chr15234409052344120-3.718867.92533K562NRD1CDS,intron-Distal
FMR1chrX153585889153585938-5.3932940.01111K562FLNA3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal
FMR1chr116396770263967759+3.645447.14100K562STIP1CDS,intron-Distal
FMR1chr162822284128222916-4.3751612.10714K562XPO65'-UTR,intron-Distal,intron-Proximal
FMR1chr5132388022132388050+3.6169811.65380K562HSPA4CDS,intron-Proximal
FMR1chr107114901371149053+4.6224123.06464K562HK1CDS,intron-Proximal
FMR1chr3184039159184039213+4.668427.17313K562EIF2B5, EIF4G13'-UTR,5'-UTR,CDS,intron-Distal
FMR1chr191043159210431627-4.074436.78575K562RAVER1CDS,intron-Distal,intron-Proximal
FMR1chr84888751348887523+4.948587.01517K562MCM43'-UTR,CDS,intron-Proximal
FMR1chr9133760121133760163+3.598895.06179K562ABL1CDS
FMR1chr146525996565260061-5.574439.49599K562SPTBCDS,intron-Distal
FMR1chr1266918196691857-3.536128.84079K562CHD4CDS,intron-Distal
FMR1chr204769185647691899+3.247385.46795K562CSE1LCDS
FMR1chr14102471532102471559+4.263967.08812K562DYNC1H1CDS
FMR1chr93571915935719209-5.1645133.63064K562TLN1CDS,intron-Distal
FMR1chr193920772539207775+4.2937416.78944K562ACTN4CDS,intron-Distal,intron-Proximal
FMR1chr77293644572936565-3.9718111.58155K562BAZ1B5'-UTR,intron-Distal
FMR1chr111452129614521351-4.638976.11569K562PSMA1, COPB15'-UTR,intron-Distal,intron-Proximal
FMR1chr172696411126964160-4.964275.26571K562KIAA0100CDS,intron-Distal
FMR1chr169482626948310+6.2291511.64117K562CAMTA1intron-Distal
FMR1chr191089724010897301+3.329137.13039K562DNM2CDS
FMR1chr8128750556128750634+3.395487.79320K562MYCCDS
FMR1chr723946392394710+4.3561717.36644K562EIF3BCDS,intron-Distal
FMR1chr116228950062289554-3.190527.68112K562AHNAKCDS,intron-Distal
FMR1chr93571461235714640-5.9363747.47319K562TLN1CDS,intron-Distal
FMR1chr14102449934102449946+3.241457.75012K562DYNC1H1CDS
FMR1chr1160264560160264602-3.155393.68653K562COPACDS,intron-Distal,intron-Proximal
FMR1chr11946461619464649-3.488809.50888K562UBR4CDS,intron-Distal
FMR1chr5149754937149755015+5.146257.36769K562TCOF1CDS,intron-Distal
FMR1chr29696889696968959-5.5288025.94374K562SNRNP200CDS,intron-Distal,intron-Proximal
FMR1chr93506030935060363-4.315376.22473K562VCPCDS,intron-Distal,intron-Proximal
FMR1chr191456890514568946+4.218867.63320K562PKN1CDS
FMR1chr191079052210790607+3.656639.94127K562ILF33'-UTR,CDS,intron-Proximal
FMR1chr1715808601580899-4.4988718.76597K562PRPF8CDS,intron-Distal
FMR1chr213370651133706554-4.806414.23016K562URB1CDS,intron-Distal,intron-Proximal
FMR1chr14102510319102510375+3.6861413.80377K562DYNC1H1CDS
FMR1chr93570627035706337-5.1755033.45763K562TLN1CDS,intron-Distal,intron-Proximal
FMR1chrX153219655153219696-3.582685.06179K562HCFC1CDS,intron-Distal,intron-Proximal
FMR1chr194239947742399557+3.776608.39949K562ARHGEF1CDS
FMR1chr7128482632128482668+5.0919816.57716K562FLNCCDS
FMR1chr9134351494134351524+4.095443.21069K562PRRC2B3'-UTR,CDS,intron-Distal
FMR1chr9133759838133759901+3.766369.90637K562ABL1CDS
FMR1chr107114250971142549+3.737709.90637K562HK1CDS,intron-Proximal
FMR1chr51026259910262732+4.9836123.94870K562CCT5CDS,intron-Proximal
FMR1chr3184020488184020530+4.088516.49839K562EIF2B5, PSMD23'-UTR,CDS,intron-Distal
FMR1chr29696462496964641-6.2129444.76864K562SNRNP200CDS,intron-Distal
FMR1chr5138261040138261081+3.699705.11423K562CTNNA13'-UTR,CDS
FMR1chr84883975948839800-3.413639.21577K562PRKDCCDS,intron-Distal
FMR1chr724022832402339+3.1870419.09609K562EIF3B3'-UTR,CDS
FMR1chr63160032331600368+3.1526211.02170K562PRRC2ACDS
FMR1chr11950081219500821-4.0454310.40939K562UBR4CDS,intron-Distal,intron-Proximal
FMR1chr213492619234926214+4.915026.66343K562SONCDS,intron-Distal
FMR1chr174293194242932015-4.071667.14100K562EFTUD2CDS,intron-Distal
FMR1chr214517247345172512+3.208454.94451K562PDXKCDS,intron-Proximal
FMR1chr159101780191017849+4.960125.38689K562IQGAP1CDS
FMR1chr172701512427015187+4.280178.77229K562SUPT6HCDS
FMR1chr224203261742032655+3.802968.46004K562XRCC6CDS
FMR1chr213492576034925818+4.5479718.05327K562SONCDS,intron-Distal
FMR1chr84877144348771491-6.3999117.41116K562PRKDCCDS,intron-Distal
FMR1chrX5322451153224584-4.3982112.95073K562KDM5CCDS,intron-Distal
FMR1chr722700482270147-4.658219.34514K562MAD1L1intron-Distal,intron-Proximal
FMR1chr168569709085697140+3.098894.08293K562GSE1CDS
FMR1chr1620526112052715-5.172318.32209K562ZNF598CDS,intron-Distal
FMR1chr124638413446384239-3.1582111.78672K562SCAF115'-UTR,intron-Distal
FMR1chrX5357207153572121-4.204174.83756K562HUWE1CDS,intron-Distal
FMR1chr116582944665829469+3.262595.85678K562SF3B2CDS
FMR1chr194239942542399477+4.321703.88823K562ARHGEF13'-UTR,CDS
FMR1chr84873922948739276-4.9943418.33481K562PRKDCCDS,intron-Distal
FMR1chr12113614690113614736-5.3657310.40059K562DDX543'-UTR,CDS,intron-Distal
FMR1chr84877718248777216-5.4891916.57716K562PRKDCCDS,intron-Distal
FMR1chr107552559675525635+3.539246.00691K562SEC24CCDS,intron-Distal
FMR1chr15568046155680513-4.769415.96254K562USP24CDS,intron-Distal
FMR1chr84874688248746943-4.7490122.06787K562PRKDCCDS,intron-Distal
FMR1chr11609365609424+4.215955.16622K562PHRF1CDS
FMR1chr649544934954583+5.242478.07480K562CDYL3'-UTR
FMR1chr1137237883723835-4.796036.26177K562NUP98CDS,intron-Distal
FMR1chr1267164666716481-4.7336211.36386K562CHD45'-UTR,intron-Distal
FMR1chr84876792348767934-3.851158.47445K562PRKDCCDS,intron-Distal
FMR1chr12363745323637547-3.1041512.35494K562HNRNPRCDS,intron-Distal
FMR1chr116229638862296423-5.020977.73121K562AHNAKCDS,intron-Distal
FMR1chr1156280861156280956-3.887938.23206K562CCT33'-UTR,CDS,intron-Distal
FMR1chr724165842416631+4.083079.84957K562EIF3BCDS,intron-Proximal
FMR1chr12124197108124197224+4.195967.34999K562ATP6V0A25'-UTR,CDS
FMR1chr14102452338102452405+5.1456218.68203K562DYNC1H1CDS
FMR1chr3184040995184041018+3.9540211.22902K562EIF2B5, EIF4G13'-UTR,5'-UTR,CDS,intron-Distal
FMR1chr79188385091883917+4.948587.01517K562ANKIB1intron-Distal
FMR1chr143167660731676734-4.1830910.07191K562HECTD15'-UTR,intron-Distal,intron-Proximal
FMR1chr11953597619536021-4.780174.57385K562UBR4intron-Distal
FMR1chr1154574888154574967-5.056447.01517K562ADAR3'-UTR,CDS,intron-Distal
FMR1chrX153587726153587737-6.7332626.64690K562FLNA3'-UTR,CDS,intron-Distal
FMR1chr191112108411121123+5.5271710.69860K562SMARCA4CDS
FMR1chr222352372823523784+4.5894811.76613K562BCRCDS,intron-Distal
FMR1chr116229284662292866-4.325477.17313K562AHNAKCDS,intron-Distal




17 proteins are bound to FMR1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX147030329147030379+3'-UTR,CDS3.352103.17151K562UCHL5
chrX147032007147032047+3'-UTR4.360047.06234K562PUM2
chrX147030295147030358+3'-UTR,CDS3.678047.75193HepG2GRWD1
chrX147030258147030353+3'-UTR,CDS3.255566.21602K562ZNF622
chrX147032047147032099+3'-UTR5.0327912.31980K562PUM2
chrX146993475146993580+5'-UTR3.508955.90734HepG2DDX3X
chrX147018052147018130+5'-UTR,CDS4.2043017.73829HepG2BCLAF1
chrX147011706147011764+5'-UTR,CDS,intron-Proximal4.3666215.11988HepG2BCLAF1
chrX147013991147014055+5'-UTR,CDS3.180873.09866HepG2FXR2
chrX147014191147014301+5'-UTR,CDS,intron-Proximal3.626814.21913K562EFTUD2
chrX146993472146993541+5'-UTR4.318624.25489HepG2NCBP2
chrX147011656147011736+5'-UTR,CDS3.976826.46787HepG2GRWD1
chrX147013948147014052+5'-UTR,CDS3.9940720.67097HepG2BCLAF1
chrX147014245147014275+5'-UTR,CDS4.581148.85766HepG2BCLAF1
chrX147010283147010325+CDS4.167216.72556HepG2PPIG
chrX147009904147009911+CDS,intron-Distal3.366355.40132HepG2BCLAF1
chrX147022139147022177+CDS4.1627912.82496HepG2BCLAF1
chrX147007047147007091+CDS,intron-Proximal3.215883.75327HepG2U2AF2
chrX147019084147019121+CDS,intron-Proximal4.9483918.25084HepG2BCLAF1
chrX147026482147026573+CDS,intron-Proximal3.073303.10677K562SRSF1
chrX147024650147024655+CDS,intron-Distal,intron-Proximal3.054105.07457HepG2BCLAF1
chrX147024815147024884+CDS,intron-Distal,intron-Proximal4.4771020.15752HepG2PRPF8
chrX147011646147011688+CDS,intron-Proximal3.5073312.67896HepG2BCLAF1
chrX147027050147027092+CDS,intron-Proximal4.380607.60776K562ZNF622
chrX147011521147011560+CDS4.1780712.93761HepG2BCLAF1
chrX147007132147007189+CDS,intron-Proximal5.080483.70131HepG2PRPF8
chrX147007103147007116+CDS4.054105.79432HepG2BCLAF1
chrX147011466147011487+CDS,intron-Proximal3.602673.34848HepG2PPIG
chrX147009841147009855+CDS,intron-Distal5.348818.07539HepG2BCLAF1
chrX147030252147030296+CDS,intron-Proximal3.007558.33225HepG2BCLAF1
chrX147027051147027138+CDS,intron-Proximal3.470029.15670HepG2GRWD1
chrX147018998147019059+CDS3.2571612.53083HepG2BCLAF1
chrX147010218147010282+CDS3.8329319.19021HepG2BCLAF1
chrX147027049147027079+CDS,intron-Proximal4.590125.56813HepG2PPIG
chrX147027055147027089+CDS3.206117.97025HepG2BCLAF1
chrX147022108147022139+CDS3.8408610.92176HepG2BCLAF1
chrX147024655147024743+CDS,intron-Distal3.0623021.06069HepG2BCLAF1
chrX147010282147010327+CDS,intron-Proximal4.4667316.66938HepG2BCLAF1
chrX147009871147009904+CDS,intron-Distal3.8974712.01397HepG2BCLAF1
chrX147026529147026573+CDS,intron-Proximal4.380607.60776K562ZNF622
chrX147026509147026574+CDS,intron-Proximal4.266437.23632K562UCHL5
chrX147022094147022106+CDS,intron-Proximal4.169119.98400HepG2BCLAF1
chrX147011465147011484+CDS,intron-Proximal4.126768.94445HepG2BCLAF1
chrX147027050147027137+CDS,intron-Proximal4.476068.63879K562UCHL5
chrX147010213147010326+CDS,intron-Proximal3.531457.83156K562ZNF622
chrX147009956147010011+intron-Distal,intron-Proximal4.305633.79000HepG2U2AF2
chrX147006799147006908+intron-Distal3.377487.35847K562KHSRP
chrX147008926147008993+intron-Distal3.772074.52210K562KHSRP
chrX147020018147020141+intron-Distal3.872353.33442K562HNRNPK
chrX147025335147025419+intron-Distal3.209257.18661HepG2U2AF2
chrX146993862146993946+intron-Distal5.016148.08215HepG2EFTUD2
chrX146993873146993937+intron-Distal4.234654.21433K562PRPF8
chrX146998261146998327+intron-Distal4.520053.77802HepG2U2AF2
chrX147004495147004544+intron-Distal3.995403.02234K562KHSRP
chrX147006693147006805+intron-Distal6.2353112.92705HepG2QKI
chrX147007232147007289+intron-Distal,intron-Proximal3.690573.32861HepG2U2AF2
chrX147025803147025844+intron-Distal4.087283.55640HepG2QKI
chrX147003585147003657+intron-Distal,intron-Proximal4.337874.21433K562PRPF8
chrX146993808146993873+intron-Distal,intron-Proximal4.073683.31283K562PRPF8
chrX146998154146998235+intron-Distal4.493576.24904HepG2PTBP1
chrX147009129147009187+intron-Distal4.084106.02363HepG2U2AF2
chrX147009037147009141+intron-Distal4.5081012.14807HepG2PTBP1
chrX147012171147012225+intron-Distal3.936384.21358HepG2U2AF2
chrX147006649147006780+intron-Distal5.4961722.42463K562QKI
chrX147006689147006799+intron-Distal3.9292710.31216K562KHSRP
chrX147006423147006487+intron-Distal4.786894.79708HepG2U2AF2
chrX147006579147006689+intron-Distal3.322654.14287K562KHSRP
chrX147003570147003645+intron-Distal,intron-Proximal4.209317.31646HepG2U2AF2
chrX147004358147004484+intron-Distal4.510639.20471K562KHSRP
chrX147009043147009127+intron-Distal4.961845.39854K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




No autoregularoty interactions between protein FMR1 and its RNA.



Diffrential Expression
  • 4,984 differentially expressed genes after Knockdown/Knockout FMR1 protein.  





  • 134 RBPs can affect the levels of FMR1.  







4,984 differentially expressed genes after Knockdown/Knockout FMR1 protein :

Only display 100 entries as example. Please click "View All" button to see all 4,984 entries.     

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC7A2ENSG00000003989.124318.997206020.28220-0.479104.463702.36490HepG2FMR1
RBM6ENSG00000004534.103644.069104886.84900-0.423403.340401.51430HepG2FMR1
ITGA3ENSG00000005884.13209.18050122.107200.776503.222701.43390HepG2FMR1
TNFRSF12AENSG00000006327.9938.91240651.488300.527203.624601.71720HepG2FMR1
JHDM1DENSG00000006459.61562.619502421.07340-0.631706.465003.96710HepG2FMR1
PHTF2ENSG00000006576.12262.78740499.14450-0.925607.496804.85840HepG2FMR1
IL32ENSG00000008517.124026.314002552.754400.657307.316504.70110HepG2FMR1
NR1H4ENSG00000012504.91351.88270945.145600.516303.931201.95820HepG2FMR1
MAN2B2ENSG00000013288.4891.63390603.302900.563504.189402.15300HepG2FMR1
DPEP1ENSG00000015413.5348.94010186.243900.905703.248301.44940HepG2FMR1
CYP24A1ENSG00000019186.51327.09370873.125700.603905.246702.97170HepG2FMR1
TOMM34ENSG00000025772.72208.449101613.842900.452403.691401.77210HepG2FMR1
FASENSG00000026103.15440.79800253.845200.796105.651003.30340HepG2FMR1
RNASET2ENSG00000026297.113838.247105264.82350-0.455904.147702.11920HepG2FMR1
TIMP2ENSG00000035862.82367.988201645.798000.524804.541802.42790HepG2FMR1
CDH1ENSG00000039068.141259.12870864.226900.542804.293902.23560HepG2FMR1
CAPGENSG00000042493.11174.91660101.029800.791803.237401.44290HepG2FMR1
RCN1ENSG00000049449.42153.477201584.789900.442303.587901.69060HepG2FMR1
FOXN3ENSG00000053254.112973.120403962.80080-0.414503.169101.39890HepG2FMR1
PLEKHH1ENSG00000054690.9617.79060879.61410-0.509803.380001.54780HepG2FMR1
ITIH4ENSG00000055955.11203.5339054.165201.9097013.7143010.23870HepG2FMR1
SLC2A3ENSG00000059804.1110130.7135020914.68980-1.0458019.6477015.74610HepG2FMR1
DGAT2ENSG00000062282.101349.78830982.266800.458403.495101.62420HepG2FMR1
NGFRENSG00000064300.4391.48970165.098701.245505.803803.43360HepG2FMR1
CDONENSG00000064309.10489.60350742.07500-0.600004.380502.30490HepG2FMR1
CTSAENSG00000064601.129498.361505989.828200.665108.307205.57190HepG2FMR1
ERBB3ENSG00000065361.107352.3630011306.18600-0.620807.119904.53360HepG2FMR1
GSDMBENSG00000073605.14606.102501000.86590-0.723606.625204.10370HepG2FMR1
MCAMENSG00000076706.102074.206701080.135600.9412013.194809.89520HepG2FMR1
TNS1ENSG00000079308.121928.792802959.49830-0.617706.979204.41330HepG2FMR1
EPB41L2ENSG00000079819.124015.850406384.56160-0.668908.085605.39710HepG2FMR1
COL16A1ENSG00000084636.13727.74530410.874200.824603.544101.65390HepG2FMR1
APOBENSG00000084674.9505979.91980378335.670700.419303.619901.71390HepG2FMR1
FTLENSG00000087086.9114314.9874079079.144900.531505.962403.56140HepG2FMR1
SLC6A14ENSG00000087916.71185.986101817.96770-0.616206.004103.59190HepG2FMR1
F11ENSG00000088926.91523.529501094.111100.477603.972301.98620HepG2FMR1
OAS1ENSG00000089127.8364.01990233.666400.639503.526401.64320HepG2FMR1
PEBP1ENSG00000089220.415533.8090011785.694200.398303.448501.59500HepG2FMR1
ABCC6ENSG00000091262.102478.990201470.596800.753308.793105.95840HepG2FMR1
SCFD1ENSG00000092108.164479.376703386.402500.403403.308501.49090HepG2FMR1
SEMA6AENSG00000092421.12688.254201114.83560-0.695806.591904.07710HepG2FMR1
C19orf77ENSG00000095932.5538.98280325.486000.727503.721701.79480HepG2FMR1
PGCENSG00000096088.1210332.850306213.587800.733609.768206.82080HepG2FMR1
UPK3AENSG00000100373.5219.10110126.761600.789403.605701.70510HepG2FMR1
SRSF5ENSG00000100650.115632.115407343.30510-0.382803.047801.31250HepG2FMR1
SERPINA4ENSG00000100665.71621.129701121.974400.530904.641702.50100HepG2FMR1
PLTPENSG00000100979.10729.99720481.294400.600904.633802.49560HepG2FMR1
SGK2ENSG00000101049.10519.66600257.457801.013109.597406.68220HepG2FMR1
C20orf24ENSG00000101084.122765.752301898.811000.542505.139502.88460HepG2FMR1
SALL4ENSG00000101115.873.46510154.91610-1.076404.719202.56570HepG2FMR1
TUBB1ENSG00000101162.31029.587302013.86720-0.9679013.6235010.19900HepG2FMR1
RNF24ENSG00000101236.12853.634301235.80380-0.533804.428702.34730HepG2FMR1
WDR13ENSG00000101940.13414.75810273.273500.601803.507901.63020HepG2FMR1
FMR1ENSG00000102081.9809.701102202.09460-1.4434028.4747024.09590HepG2FMR1
PGK1ENSG00000102144.924164.3460033946.21320-0.490404.825002.63940HepG2FMR1
TIMP1ENSG00000102265.71027.32780666.088000.625003.536901.64810HepG2FMR1
GABREENSG00000102287.121324.881901826.53670-0.463203.460501.60420HepG2FMR1
KPNA3ENSG00000102753.52390.386501801.811400.407703.115501.36310HepG2FMR1
CEP152ENSG00000103995.9431.59460637.06120-0.561803.752901.81660HepG2FMR1
BMFENSG00000104081.9556.76950790.45770-0.505603.234401.44220HepG2FMR1
VPS18ENSG00000104142.6460.65620288.098200.677004.082402.07520HepG2FMR1
NDRG1ENSG00000104419.107961.2761010842.96680-0.445704.292102.23560HepG2FMR1
ASAH1ENSG00000104763.133901.234602863.230800.446203.948301.97100HepG2FMR1
HNRNPLENSG00000104824.125214.433207103.74210-0.446104.041702.04140HepG2FMR1
FBLENSG00000105202.33019.905604534.22720-0.586406.170403.73610HepG2FMR1
SULT2A1ENSG00000105398.33689.197502635.308400.485203.147201.38470HepG2FMR1
CYP3A5ENSG00000106258.9361.91920205.524200.816305.300103.01480HepG2FMR1
SERPINE1ENSG00000106366.710933.8997015851.83350-0.535805.613403.28000HepG2FMR1
EZH2ENSG00000106462.6929.437501315.92880-0.501703.704901.78100HepG2FMR1
SEC61BENSG00000106803.51530.698601098.010400.479203.440401.59180HepG2FMR1
KANK1ENSG00000107104.145817.123808195.95610-0.494604.726502.56820HepG2FMR1
CA9ENSG00000107159.8879.515501691.52060-0.9435011.631608.55390HepG2FMR1
KRT23ENSG00000108244.121406.02650957.080600.554804.898602.70450HepG2FMR1
SLC6A4ENSG00000108576.5248.96620429.56580-0.786905.265502.98440HepG2FMR1
COL1A1ENSG00000108821.9199.0594069.107101.526209.576206.68220HepG2FMR1
ABCC3ENSG00000108846.112680.864401896.523800.499204.426702.34730HepG2FMR1
MMDENSG00000108960.34145.747906479.77800-0.644307.694505.04000HepG2FMR1
VTNENSG00000109072.96341.293904699.956300.432003.640401.73000HepG2FMR1
ODAMENSG00000109205.12455.250101018.79300-1.1621012.223709.07540HepG2FMR1
GRPEL1ENSG00000109519.81110.620801651.97510-0.572804.963102.75170HepG2FMR1
FNBP4ENSG00000109920.82034.465602843.59910-0.483104.135402.11080HepG2FMR1
CPT1AENSG00000110090.81632.527901094.359300.576905.446003.13170HepG2FMR1
HPXENSG00000110169.61005.49070363.310001.4685022.5324018.45460HepG2FMR1
PVRL1ENSG00000110400.6683.92320475.568900.524103.309001.49090HepG2FMR1
MDKENSG00000110492.114150.508202424.380800.775603.054901.31770HepG2FMR1
MVKENSG00000110921.7834.49950526.536100.664305.331503.04270HepG2FMR1
PPM1HENSG00000111110.71711.972702445.94210-0.514704.553802.43750HepG2FMR1
ARPC3ENSG00000111229.114195.987802339.266900.8429012.011808.88830HepG2FMR1
ENO2ENSG00000111674.43142.947304444.13840-0.499804.746702.58280HepG2FMR1
GCNT2ENSG00000111846.111154.10660697.864400.725705.172902.91470HepG2FMR1
NEDD9ENSG00000111859.126208.076708439.84680-0.443103.965601.98300HepG2FMR1
MCM3ENSG00000112118.136233.160608348.40460-0.421503.497901.62530HepG2FMR1
KIAA1244ENSG00000112379.8426.01590714.67110-0.746406.402803.92160HepG2FMR1
GPR126ENSG00000112414.107507.5586010058.64160-0.422003.697001.77460HepG2FMR1
UNC93AENSG00000112494.5506.69460268.260000.917407.889005.22620HepG2FMR1
CCND3ENSG00000112576.8212.95940117.173800.861803.273301.46630HepG2FMR1
FAM46AENSG00000112773.11725.630701010.55230-0.477803.270801.46490HepG2FMR1
PAPD7ENSG00000112941.8860.980601224.61630-0.508303.825501.87650HepG2FMR1
LOXENSG00000113083.82489.661704062.65780-0.706508.633705.85700HepG2FMR1
SPARCENSG00000113140.64456.683902790.831700.675208.176905.47750HepG2FMR1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





134 RBPs can affect the gene expression of FMR1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FMR1ENSG00000102081.91789.262702529.21280-0.499304.622103.43010HepG2ABCF1
FMR1ENSG00000102081.91091.238602135.54480-0.9686037.1521035.54800HepG2ACO1
FMR1ENSG00000102081.91538.434104018.21840-1.3851027.4227025.95690HepG2AKAP1
FMR1ENSG00000102081.92083.999203395.88820-0.704405.822804.34100HepG2AKAP8
FMR1ENSG00000102081.91605.236902145.55520-0.418607.311306.12940HepG2AKAP8L
FMR1ENSG00000102081.92712.294903324.66310-0.293702.099201.41080HepG2ASCC1
FMR1ENSG00000102081.9637.574701383.90160-1.1181014.1137011.89710HepG2BCCIP
FMR1ENSG00000102081.92363.316601846.357400.356002.759101.98800HepG2CALR
FMR1ENSG00000102081.9938.936202478.71060-1.4005018.7399016.38580HepG2CCAR1
FMR1ENSG00000102081.91268.876803158.68320-1.3158030.3555028.21210HepG2CIRBP
FMR1ENSG00000102081.91814.062602135.05310-0.235003.328402.61030HepG2CKAP4
FMR1ENSG00000102081.91593.226902083.30890-0.386903.725602.44580HepG2CPSF7
FMR1ENSG00000102081.9755.084401352.50410-0.8409017.6104015.23770HepG2YBX3
FMR1ENSG00000102081.92964.278702353.911800.332506.743305.66040HepG2DAZAP1
FMR1ENSG00000102081.91397.729201975.06030-0.4988011.6392010.16720HepG2DDX19B
FMR1ENSG00000102081.9950.437601431.17180-0.590507.121406.08440HepG2DDX21
FMR1ENSG00000102081.91701.570101400.341800.281002.320301.49110HepG2DDX24
FMR1ENSG00000102081.92077.382603848.98780-0.8897014.2587012.95110HepG2DDX3X
FMR1ENSG00000102081.94162.650903371.847900.303902.694001.41280HepG2DDX47
FMR1ENSG00000102081.9711.331401360.62120-0.9357010.292608.91370HepG2DDX55
FMR1ENSG00000102081.92013.729803306.74040-0.715508.166007.15640HepG2DDX6
FMR1ENSG00000102081.91778.816401280.895500.473705.201903.88380HepG2DHX30
FMR1ENSG00000102081.91514.319302043.13050-0.432107.412406.40520HepG2DKC1
FMR1ENSG00000102081.91848.219401328.033300.476707.533506.41940HepG2DNAJC21
FMR1ENSG00000102081.9998.414601316.34180-0.398806.479005.53950HepG2DNAJC2
FMR1ENSG00000102081.9901.455801620.23630-0.8459011.495809.79010HepG2EEF2
FMR1ENSG00000102081.92221.825403178.47230-0.516605.356504.54860HepG2EIF2S1
FMR1ENSG00000102081.9839.532501315.32830-0.647805.965604.67170HepG2EIF3D
FMR1ENSG00000102081.91562.740703512.40300-1.1684019.7869018.10070HepG2EIF4A3
FMR1ENSG00000102081.92174.839903420.16570-0.653205.616804.65970HepG2EIF4B
FMR1ENSG00000102081.93344.486102224.483100.588207.658406.33200HepG2EIF4G2
FMR1ENSG00000102081.91928.230503819.44220-0.9861042.4311040.60370HepG2ETF1
FMR1ENSG00000102081.92395.957501363.766600.8129015.3764013.10730HepG2FASTKD2
FMR1ENSG00000102081.9970.585802553.98920-1.3958026.3778024.46070HepG2FIP1L1
FMR1ENSG00000102081.9809.701102202.09460-1.4434028.4747024.09590HepG2FMR1
FMR1ENSG00000102081.91014.787801846.21720-0.863406.384404.73830HepG2FUS
FMR1ENSG00000102081.91680.315103544.41990-1.0768020.7322019.02490HepG2FXR1
FMR1ENSG00000102081.9497.042501171.14710-1.2365021.4725019.27280HepG2GEMIN5
FMR1ENSG00000102081.9983.918602147.86490-1.1263018.2968016.80020HepG2GPKOW
FMR1ENSG00000102081.92385.017902038.817200.226202.797701.81610HepG2HDGF
FMR1ENSG00000102081.9425.775701340.75660-1.6549040.5995038.69590HepG2HNRNPA1
FMR1ENSG00000102081.91894.514202667.67770-0.493803.725902.09260HepG2HNRNPAB
FMR1ENSG00000102081.91188.796101491.35570-0.327102.558101.88950HepG2HNRNPC
FMR1ENSG00000102081.92129.468601464.887200.5396011.252209.93530HepG2HNRNPF
FMR1ENSG00000102081.92528.405503329.75090-0.397203.978603.15500HepG2HNRNPK
FMR1ENSG00000102081.92418.103702144.283700.173301.967301.38670HepG2HNRNPL
FMR1ENSG00000102081.9714.610401762.39580-1.3023033.5454030.98980HepG2HNRNPM
FMR1ENSG00000102081.91174.742401481.49480-0.334704.523703.76480HepG2HNRNPU
FMR1ENSG00000102081.92514.414503698.87980-0.556902.704001.49260HepG2HSPD1
FMR1ENSG00000102081.91837.416801442.493400.349001.980701.36050HepG2IGF2BP1
FMR1ENSG00000102081.91989.669303341.75000-0.7481010.613609.38330HepG2IGF2BP2
FMR1ENSG00000102081.92048.665601513.295900.4369010.425809.09530HepG2ILF2
FMR1ENSG00000102081.92313.662503078.34960-0.412002.849301.63540HepG2KHDRBS1
FMR1ENSG00000102081.91515.379802616.21560-0.787808.525507.06170HepG2LARP4
FMR1ENSG00000102081.91160.941601882.48570-0.697303.642602.24610HepG2LIN28B
FMR1ENSG00000102081.92498.050203545.65980-0.505305.090304.20930HepG2MAGOH
FMR1ENSG00000102081.91592.440403565.41450-1.1628020.5516018.96210HepG2MATR3
FMR1ENSG00000102081.91146.714902067.43350-0.8503015.9192014.16010HepG2MSI2
FMR1ENSG00000102081.91879.661903649.32700-0.9572015.5073014.09230HepG2NCBP2
FMR1ENSG00000102081.92092.485203602.90300-0.7839014.3968011.26440HepG2NUP35
FMR1ENSG00000102081.92173.569102953.68420-0.442402.111701.35150HepG2PABPC1
FMR1ENSG00000102081.92238.179203249.62800-0.537905.579704.56590HepG2PABPC4
FMR1ENSG00000102081.92230.725003079.62280-0.4652010.177009.12980HepG2PCBP1
FMR1ENSG00000102081.92061.160501653.491000.317804.257903.32200HepG2PRPF4
FMR1ENSG00000102081.9937.767901837.47830-0.970407.314805.42310HepG2PRPF6
FMR1ENSG00000102081.92418.100903133.74660-0.374006.432205.66660HepG2PTBP1
FMR1ENSG00000102081.91627.939302228.08080-0.452805.453404.65210HepG2PUF60
FMR1ENSG00000102081.91560.848002365.15220-0.5996019.4647018.17940HepG2PUM1
FMR1ENSG00000102081.91781.596702175.18690-0.288004.351703.61160HepG2PUS1
FMR1ENSG00000102081.95881.186803393.679200.7932024.4916022.89340HepG2QKI
FMR1ENSG00000102081.91457.889803192.35450-1.1307044.1822042.58610HepG2RBM22
FMR1ENSG00000102081.9968.784301754.73250-0.857004.751703.35310HepG2RCC2
FMR1ENSG00000102081.91756.546703487.46330-0.9894040.9102039.38170HepG2NELFE
FMR1ENSG00000102081.92638.001603248.27190-0.300204.720703.94460HepG2RECQL
FMR1ENSG00000102081.93376.411401656.587601.0272010.925509.18450HepG2RPS10
FMR1ENSG00000102081.9672.561501279.82130-0.9282015.9395014.63380HepG2RPS19
FMR1ENSG00000102081.91359.765601993.08910-0.551602.602401.82480HepG2RPS2
FMR1ENSG00000102081.91517.757101038.527000.547304.897603.88440HepG2RRP9
FMR1ENSG00000102081.92945.512301834.622200.682905.082103.00070HepG2RTF1
FMR1ENSG00000102081.91663.938201319.329700.334705.078504.25350HepG2SAFB2
FMR1ENSG00000102081.91289.644402622.79150-1.0241012.5339011.03770HepG2SF3A3
FMR1ENSG00000102081.93529.544002028.882300.7987014.4511012.97300HepG2SF3B1
FMR1ENSG00000102081.92708.724803262.42800-0.268303.821403.14450HepG2SF3B4
FMR1ENSG00000102081.9982.823703264.89050-1.732005.663403.46950HepG2SFPQ
FMR1ENSG00000102081.91140.104801538.54970-0.432408.337907.31630HepG2SMN1
FMR1ENSG00000102081.93087.904902257.471300.451802.675501.90700HepG2SNRNP70
FMR1ENSG00000102081.91476.469503405.35290-1.2057063.9769062.38480HepG2SRSF1
FMR1ENSG00000102081.92260.421201439.211200.6512016.3874014.93790HepG2SRSF7
FMR1ENSG00000102081.93575.323902770.508600.367808.041407.18800HepG2SRSF9
FMR1ENSG00000102081.92240.424603130.59050-0.4827011.6935010.78170HepG2SSB
FMR1ENSG00000102081.91953.840202821.63920-0.530204.123002.75800HepG2STIP1
FMR1ENSG00000102081.91909.680302501.88010-0.389708.541107.54890HepG2SUCLG1
FMR1ENSG00000102081.93896.284003061.098100.347903.192002.59560HepG2TAF15
FMR1ENSG00000102081.92439.677101997.657600.288302.284501.61620HepG2TARDBP
FMR1ENSG00000102081.92034.909603618.45660-0.830404.444003.11640HepG2TBRG4
FMR1ENSG00000102081.9812.314501439.50480-0.8255015.8468014.82780HepG2TIAL1
FMR1ENSG00000102081.9836.845301452.42040-0.7954020.0578018.71630HepG2TRIM56
FMR1ENSG00000102081.91765.002802185.00050-0.308002.226201.65680HepG2U2AF1
FMR1ENSG00000102081.93173.110902303.894500.461703.952402.94200HepG2UBE2L3
FMR1ENSG00000102081.91197.28370800.215100.581205.805604.69620HepG2UCHL5
FMR1ENSG00000102081.92009.237902326.01850-0.211202.647701.96170HepG2UPF1
FMR1ENSG00000102081.9799.645901240.51970-0.633503.673802.50240HepG2UPF2
FMR1ENSG00000102081.9779.665302245.67420-1.5262075.6597073.23760HepG2UTP3
FMR1ENSG00000102081.92429.262401658.379000.550603.797002.30810HepG2XRCC5
FMR1ENSG00000102081.91167.478701854.93990-0.668004.352303.03670HepG2XRCC6
FMR1ENSG00000102081.9726.379401333.39710-0.8763010.415109.02680HepG2XRN2
FMR1ENSG00000102081.91177.430302558.17020-1.1195060.9012059.21620HepG2ZNF622
FMR1ENSG00000102081.92446.515301684.908700.538003.938802.36550HepG2ZRANB2
FMR1ENSG00000102081.91426.735501158.020300.301003.632202.99800K562AGGF1
FMR1ENSG00000102081.91588.414201204.985100.398503.875703.10070K562AKAP8L
FMR1ENSG00000102081.91885.075501449.710900.378803.407502.77050K562AQR
FMR1ENSG00000102081.91144.358001456.48710-0.348003.844202.53330K562CPEB4
FMR1ENSG00000102081.92747.943602110.169100.380905.672104.27770K562CELF1
FMR1ENSG00000102081.91300.426901507.14610-0.212802.006701.43600K562DDX47
FMR1ENSG00000102081.91064.596501296.57200-0.284402.503001.67470K562DKC1
FMR1ENSG00000102081.9646.75170814.41030-0.332502.606001.83180K562EIF3G
FMR1ENSG00000102081.9592.548401049.79120-0.8251010.884109.07560K562FIP1L1
FMR1ENSG00000102081.9688.958901167.74490-0.761209.429707.80040K562FMR1
FMR1ENSG00000102081.91335.76980955.711200.482902.158401.54530K562G3BP2
FMR1ENSG00000102081.9775.333401095.73380-0.499004.829903.78490K562GPKOW
FMR1ENSG00000102081.91079.420001296.36940-0.264201.978401.33310K562GRSF1
FMR1ENSG00000102081.9650.11430884.49490-0.444202.427701.42410K562HNRNPA1
FMR1ENSG00000102081.91024.066801362.03930-0.411504.019802.71900K562HNRNPL
FMR1ENSG00000102081.9567.65300863.42560-0.605103.981702.85110K562HNRNPM
FMR1ENSG00000102081.9478.93530334.574100.517403.129301.53310K562ILF3
FMR1ENSG00000102081.91771.952801278.746600.470505.284204.06720K562KIF1C
FMR1ENSG00000102081.91991.909601432.525300.475505.858104.44530K562MBNL1
FMR1ENSG00000102081.91614.321401004.100300.684902.327201.53430K562NAA15
FMR1ENSG00000102081.91310.199801039.253500.334102.551501.61320K562PCBP2
FMR1ENSG00000102081.91288.99740874.398800.559804.844403.74700K562PCBP3
FMR1ENSG00000102081.9858.38100670.718800.355802.935702.11010K562POLR2G
FMR1ENSG00000102081.9936.949701191.65920-0.346902.645101.84650K562PPIG
FMR1ENSG00000102081.9818.514301134.72060-0.471305.093304.21550K562PTBP1
FMR1ENSG00000102081.92483.551201872.979300.407005.009503.91310K562PUF60
FMR1ENSG00000102081.92245.905601194.925400.9103016.0411014.77550K562PUS1
FMR1ENSG00000102081.91589.724101164.348700.449206.210805.34800K562RBM15
FMR1ENSG00000102081.9799.856101060.68970-0.407202.970001.51550K562RBM34
FMR1ENSG00000102081.9685.16100942.19110-0.459602.924801.89210K562RPS3
FMR1ENSG00000102081.91500.143701064.129800.495305.943004.63760K562SRPK2
FMR1ENSG00000102081.9572.911701112.36790-0.9572016.2840014.57390K562SRSF1
FMR1ENSG00000102081.9627.40860909.66720-0.535905.060203.56380K562SRSF4
FMR1ENSG00000102081.91775.008401377.455500.365702.621201.30670K562SSRP1
FMR1ENSG00000102081.9896.46070659.375500.443002.737401.72580K562SUPV3L1
FMR1ENSG00000102081.9868.539701086.00590-0.322402.636201.83790K562TIA1
FMR1ENSG00000102081.9797.780201065.50800-0.417503.490202.23460K562TRA2A
FMR1ENSG00000102081.9489.78660645.38540-0.398002.491601.60190K562TRIM56
FMR1ENSG00000102081.91224.64630956.643300.356203.339602.45950K562U2AF2
FMR1ENSG00000102081.9894.79940697.767900.358702.460501.50680K562UCHL5
FMR1ENSG00000102081.92103.818801717.995100.292202.605401.35840K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





489 alternative splicing events after Knockdown/Knockout FMR1 protein :

Only display 100 entries as example. Please click "View All" button to see all 489 entries.     

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDGUOKENSG00000114956.15chr2+7415972474159810741540237415417974173845741740150.119000.000080.01519includedK562FMR1
SESNRNP70ENSG00000104852.10chr19+4960537049606844496046464960472849607890496079920.347000.000000.00000includedK562FMR1
SELUC7L3ENSG00000108848.11chr17+4882865748828723488281074882821348829560488299460.300000.000370.04609includedK562FMR1
SEARHGAP18ENSG00000146376.6chr6-1299051321299052571299012141299012761299203601299205010.127000.000640.06965includedK562FMR1
SEATXN2ENSG00000204842.10chr12-1119024651119025191118950171118951631119079111119080440.233000.000000.00000includedK562FMR1
SETMEM50BENSG00000142188.12chr21-3482831034828404348280333482809134832719348328120.058000.000000.00003includedK562FMR1
SERP11-580I16.2ENSG00000263766.1chr17-4570391245703993456992074569945345713877457139670.278000.000600.06614includedK562FMR1
SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.249000.000010.00370includedK562FMR1
SENSUN6ENSG00000241058.1chr10-1893249718932569189314041893148418937418189375740.120000.000000.00000includedK562FMR1
SEDROSHAENSG00000113360.12chr5-3142854331428672314245333142457831429581314296520.133000.000590.06520includedK562FMR1
SEC1orf43ENSG00000143612.14chr1-1541923111541924361541869321541870501541928171541931040.149000.000420.05023includedK562FMR1
SEKIF23ENSG00000137807.9chr15+6973310669733418697326466973282669737128697373800.151000.000000.00015includedK562FMR1
SESP2ENSG00000167182.11chr17+4597518045975293459735154597365945992677459927540.107000.000740.07728includedK562FMR1
SEMKI67ENSG00000148773.8chr10-1299131911299142711299116901299118661299147541299148000.278000.000150.02292includedK562FMR1
SEC2CD3ENSG00000168014.12chr11-7387244373872601738506497385087373879388738796580.158000.000420.05023includedK562FMR1
SEZNF207ENSG00000010244.12chr17+3069368330693776306923483069250630694790306950330.121000.000000.00100includedK562FMR1
SEMYSM1ENSG00000162601.5chr1-5915496559155039591547095915478859155897591559210.250000.000000.00000includedK562FMR1
SEPSMD6ENSG00000163636.6chr3-6400831864008477640079936400819964008950640091480.110000.000180.02720includedK562FMR1
SETMEM165ENSG00000134851.8chr4+5626940256269505562621295626256356277780562780060.139000.000090.01601includedK562FMR1
SEEXO1ENSG00000174371.12chr1+2420298862420300332420247072420248042420301312420303570.068000.000090.01591includedK562FMR1
SESREK1ENSG00000153914.11chr5+6546043565460528654596196545975065460610654607250.104000.000000.00100includedK562FMR1
SESREK1ENSG00000153914.11chr5+6545189265454760654492906544942465455046654551620.402000.000000.00000includedK562FMR1
SERP1-283E3.8ENSG00000268575.1chr1-1654026165407316530341653150165414616542700.095000.000790.08067includedK562FMR1
SEGPBP1L1ENSG00000159592.6chr1-4615124746151292461262204612689746153654461537850.245000.000920.08879includedK562FMR1
SETANKENSG00000136560.9chr2+1620336221620337631620177951620179231620361241620362720.155000.000090.01561includedK562FMR1
SESNHG6ENSG00000245910.4chr8-6783484867834960678345586783462767837671678378310.072000.000230.03287includedK562FMR1
SEDECR1ENSG00000104325.2chr8+9101767591017959910137049101378991029351910295540.071000.000780.07963includedK562FMR1
SERHOT1ENSG00000126858.12chr17+3049995530500079304980403049812030500849305009310.090000.000040.00859includedK562FMR1
SESMC6ENSG00000163029.11chr2-1793424417934331179271041792721817934892179350400.264000.000190.02836includedK562FMR1
SEUGP2ENSG00000169764.10chr2+6408997464090062640849626408507064109599641097350.174000.000050.00946includedK562FMR1
SEZNF692ENSG00000171163.11chr1-2491450612491451462491448802491449802491481352491482500.056000.000040.00859includedK562FMR1
SEDCAF6ENSG00000143164.11chr1+1679922251679922851679737701679740311680076081680077260.219000.000000.00010includedK562FMR1
SEMTRRENSG00000124275.10chr5+7890389789052578892077889388789148478915270.086000.000020.00419includedK562FMR1
SEANKHD1ENSG00000131503.16chr5+1399149461399151231399077681399093811399169221399171740.073000.000160.02415includedK562FMR1
SERBM25ENSG00000119707.9chr14+7356700873567070735663747356645873569899735701860.071000.000000.00000includedK562FMR1
SEARID1BENSG00000049618.17chr6+1574718581574719871574699231574700851574881731574883190.241000.000430.05080includedK562FMR1
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.192000.000380.04662includedK562FMR1
SEFOXM1ENSG00000111206.8chr12-2974520297456529738482973918297555829756870.201000.000000.00043includedK562FMR1
SECOCHENSG00000100473.11chr14+3135411531354247313537583135386231354599313548260.067000.000270.03677includedK562FMR1
SECOCHENSG00000100473.11chr14+3134801631348150313467773134693431348628313486910.068000.000000.00013includedK562FMR1
SEUSP9XENSG00000124486.8chrX+4106031241060533410579194105800341064555410647460.081000.000280.03712includedK562FMR1
SENSFL1CENSG00000088833.13chr20-1426639142679414263101426475143313714332950.078000.000200.02895includedK562FMR1
SEEEDENSG00000074266.13chr11+8598112485981199859789368597960385988021859881800.267000.000000.00055includedK562FMR1
SECDC45ENSG00000093009.5chr22+1947031319470350194684751946856819471384194715280.071000.000750.07834includedK562FMR1
SEWARSENSG00000140105.13chr14-1008416191008417401008354231008355951008425961008426480.221000.000070.01324includedK562FMR1
SEMRRFENSG00000148187.13chr9+1250483171250484451250474471250475661250540271250540770.236000.000090.01591includedK562FMR1
SEFNBP4ENSG00000109920.8chr11-4774728847747388477460234774633047752925477531130.108000.000000.00000includedK562FMR1
SECCNL2ENSG00000221978.7chr1-1328058132818313261451326245132877513288400.292000.000240.03407includedK562FMR1
SESRSF6ENSG00000124193.10chr20+4208779242088060420870004208714942088410420885350.191000.000210.02969includedK562FMR1
SEHMGN1ENSG00000205581.6chr21-4071775540719218407170714071720040719304407194090.254000.000000.00000includedK562FMR1
SEHMGN1ENSG00000205581.6chr21-4071984140719878407193044071940940720217407202650.168000.000090.01572includedK562FMR1
SELPGAT1ENSG00000123684.8chr1-2119609732119610692119565702119568442119664132119665320.100000.000110.01780includedK562FMR1
SEHNRNPDENSG00000138668.14chr4-8327604783276154832749868327530783276456832765540.074000.000000.00000includedK562FMR1
SESLAIN2ENSG00000109171.10chr4+4839659248396670483856634838580148422141484224600.141000.000010.00153includedK562FMR1
SEANXA2ENSG00000182718.12chr15-6068945660689537606782266067828560690141606901720.197000.000090.01570includedK562FMR1
SECCBL2ENSG00000137944.12chr1-8945393489454034894350918943515089458267894586040.396000.000110.01821includedK562FMR1
SECDCA7ENSG00000144354.9chr2+1742287271742288891742285451742286231742295221742296010.242000.000000.00015includedK562FMR1
SEPRKAG1ENSG00000181929.7chr12-4939952549399635493992444939932649406844494068930.117000.000770.07963includedK562FMR1
SERSPRY1ENSG00000159579.9chr16+5724150457241597572385085723892057241969572420220.255000.000090.01659includedK562FMR1
SEAKAP17AENSG00000197976.6chrX+1719030171910017180841718325171955117213950.235000.000100.01731includedK562FMR1
SEMTMR12ENSG00000150712.6chr5-3223306632233126322301903223045332233878322339990.156000.000950.09035includedK562FMR1
SEGTDC1ENSG00000121964.10chr2-1449685801449688041449661691449663711449690811449691460.202000.000000.00042includedK562FMR1
SETMEM116ENSG00000198270.8chr12-1123749631123750471123716891123718341123759641123760140.133000.000700.07436includedK562FMR1
SECD47ENSG00000196776.10chr3-1077707851077708171077621451077661391077763231077764160.263000.000020.00490includedK562FMR1
SEPEX6ENSG00000124587.9chr6-4294174042941824429376224293772542942612429427760.176000.000200.02930includedK562FMR1
SENR2C2ENSG00000177463.11chr3+1504606315046120150453821504549315055095150552960.247000.000050.01066includedK562FMR1
SEUNC119BENSG00000175970.7chr12+1211493921211495591211483191211485211211510761211511900.328000.000650.07037includedK562FMR1
SEC6orf106ENSG00000196821.5chr6-3461748534617607346143773461457534622401346225560.058000.000240.03376includedK562FMR1
SESMG5ENSG00000198952.7chr1-1562433541562434391562431511562432411562443871562444770.076000.000010.00306includedK562FMR1
SERP11-669N7.2ENSG00000249196.2chr12+1295959641295960601295955371295956841295976091295978380.099000.000430.05087includedK562FMR1
SEZNF800ENSG00000048405.5chr7-1270261131270262091270172391270173831270315501270316690.160000.000000.00013includedK562FMR1
SEZFAND6ENSG00000086666.14chr15+8039075780390920803519098035215180412669804128400.198000.000270.03630includedK562FMR1
SECSNK1A1ENSG00000113712.12chr5-1488952311488952891488926321488927721488973561488974400.120000.000000.00081includedK562FMR1
SECUL2ENSG00000108094.10chr10-3537882335378929353601263536026735379106353792920.307000.000340.04396includedK562FMR1
SEZRANB2ENSG00000132485.8chr1-7153136071531431715307367153082071532458715328890.148000.000180.02672includedK562FMR1
SEGS1-179L18.1ENSG00000205628.2chr7-5384784953847923538476385384773153879200538796240.418000.000050.00945includedK562FMR1
SEHNRNPDLENSG00000152795.13chr4-8334671583346820833457818334603683347189833472740.106000.000000.00026includedK562FMR1
SERP11-216L13.19ENSG00000273066.1chr9+1397037061397038811397021911397027781397041391397044940.320000.000040.00928includedK562FMR1
SESLMAPENSG00000163681.10chr3+5788197357882098578757675787582757882237578823180.140000.000000.00032includedK562FMR1
SEDLEU2ENSG00000231607.4chr13-5064471750644777506422325064229950649694506497890.141000.000400.04874includedK562FMR1
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.212000.000010.00200includedK562FMR1
SECHORDC1ENSG00000110172.7chr11-8993991589939978899393698993944089943703899437620.054000.000070.01306includedK562FMR1
SEDMTF1ENSG00000135164.14chr7+8679255486792648867837058678384486792810867928800.318000.000330.04207includedK562FMR1
SECREBZFENSG00000137504.9chr11-8537422285374337853729968537350185374567853746450.151000.000040.00802includedK562FMR1
SEZNF766ENSG00000196214.6chr19+5278536352785490527728455277288452786537527866660.386000.000040.00790includedK562FMR1
SEZNF586ENSG00000083828.11chr19+5828791058288037582810375828124658290118582919820.665000.000020.00404includedK562FMR1
SESAGE1ENSG00000181433.5chrX+1349878001349879411349874101349875511349881821349883230.340000.000040.00880includedK562FMR1
SETPP2ENSG00000134900.7chr13+1032890441032891131032885731032887421032894311032895890.120000.000250.03494includedK562FMR1
SECCNHENSG00000134480.9chr5-8669022186690301866873108668872186690860866909350.133000.001080.09813includedK562FMR1
SESPECC1LENSG00000100014.15chr22+2467266724672771246668072466695124698162246983520.515000.000080.01397includedK562FMR1
SENT5C3AENSG00000122643.14chr7-3307554533075600330664283306652733102179331024080.294000.000000.00132includedK562FMR1
SEARPC4-TTLL3ENSG00000250151.5chr3+9870183987025998686809868924987064398710790.135000.000070.01356includedK562FMR1
SEPET100ENSG00000229833.5chr19+7696117769620776957087695732769635876965100.054000.000070.01357includedK562FMR1
SEINSIG1ENSG00000186480.8chr7+1550955341550956051550944561550945561550999501551006700.114000.000000.00047includedK562FMR1
SESMG7ENSG00000116698.16chr1+1834819711834820031834413501834417841834850081834851260.104000.000030.00739includedK562FMR1
SECLN8ENSG00000182372.6chr8+1706414170647217039531704248170746217076770.250000.001080.09813includedK562FMR1
SEPIEZO1ENSG00000103335.15chr16-8878394488784023887834308878361988785981887861290.094000.001060.09723includedK562FMR1
SERAP1BENSG00000127314.13chr12+6901845069018653690046876900482369042478690425610.073000.000030.00787includedK562FMR1
SETMEM192ENSG00000170088.9chr4-1660328001660328311660241011660242481660338981660340060.230000.000170.02565includedK562FMR1
SEEXOSC9ENSG00000123737.8chr4+1227372981227373491227350201227352021227375231227376020.127000.000090.01560includedK562FMR1





17 RBPs can affect the splicing of FMR1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFMR1ENSG00000102081.9chrX+1470196171470196801470189841470191191470220941470221810.119000.000030.00516includedHepG2G3BP1
SEFMR1ENSG00000102081.9chrX+1470149191470150591470142031470142821470180221470181320.094000.000670.01494includedK562SRSF1
SEFMR1ENSG00000102081.9chrX+1470196171470196801470189841470191191470220941470221810.177000.000010.00026includedHepG2U2AF1
SEFMR1ENSG00000102081.9chrX+1470196171470196801470189841470191191470220941470221810.100000.000750.04680includedHepG2AKAP1
SEFMR1ENSG00000102081.9chrX+1470196171470196801470189841470191191470220941470221810.189000.000110.00662includedK562FXR1
SEFMR1ENSG00000102081.9chrX+147009839147009911147003450147003503147010176147010325-0.085000.000250.00529excludedK562PUS1
SEFMR1ENSG00000102081.9chrX+1470196171470196801470189841470191191470220941470221810.095000.000780.04720includedHepG2NCBP2
SEFMR1ENSG00000102081.9chrX+1470196171470196801470189841470191191470220941470221810.114000.000210.01264includedHepG2MATR3
SEFMR1ENSG00000102081.9chrX+1470196171470196801470189841470191191470220941470221810.132000.000060.00769includedHepG2IGF2BP3
SEFMR1ENSG00000102081.9chrX+147009839147009911147003450147003503147010176147010325-0.074000.002210.04950excludedK562RBM15
SEFMR1ENSG00000102081.9chrX+147009839147009911147003450147003503147010176147010325-0.075000.003080.09364excludedK562SF3B1
SEFMR1ENSG00000102081.9chrX+1470196171470196801470189841470191191470220941470221810.152000.001300.04903includedK562PTBP1
A3SSFMR1ENSG00000102081.9chrX+1470263881470265711470264631470265711470246501470248460.197000.000280.06540longerHepG2NCBP2
A3SSFMR1ENSG00000102081.9chrX+1470220681470221811470220941470221811470189221470191190.102000.000200.00164longerK562AQR
MXEFMR1ENSG00000102081.9chrX+1470070571470071511470098391470099111470034501470035031470101761470103250.082000.000150.045311includedHepG2EIF3H
MXEFMR1ENSG00000102081.9chrX+147019025147019119147019617147019680147018022147018132147022094147022181-0.218000.001020.035022includedK562PTBP1
MXEFMR1ENSG00000102081.9chrX+147018984147019119147019617147019680147018022147018132147022094147022181-0.100000.002500.066042includedK562PTBP1
MXEFMR1ENSG00000102081.9chrX+1470070571470071511470098391470099111470034501470035031470101761470103250.118000.000160.004721includedK562DROSHA
MXEFMR1ENSG00000102081.9chrX+1470070571470071511470098391470099111470034501470035031470101761470103250.194000.000000.000241includedK562SF3B1
MXEFMR1ENSG00000102081.9chrX+1470220941470221811470246501470248461470142031470142821470263881470265710.106000.006300.043611includedK562AQR
MXEFMR1ENSG00000102081.9chrX+1470220681470221811470246501470248461470142031470142821470263881470265710.100000.004550.033121includedK562AQR
MXEFMR1ENSG00000102081.9chrX+1470220041470221811470246501470248461470142031470142821470263881470265710.084000.014790.086671includedK562AQR
MXEFMR1ENSG00000102081.9chrX+147018984147019119147022068147022181147018022147018132147026388147026571-0.061000.010770.067242includedK562AQR
MXEFMR1ENSG00000102081.9chrX+147019025147019119147019617147019680147018022147018132147022094147022181-0.125000.000680.070602includedHepG2CDC40
MXEFMR1ENSG00000102081.9chrX+147007057147007151147009839147009911147003450147003503147010176147010325-0.213000.002750.053352includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





No autoregularoty alternative splicing events between protein FMR1 and its RNA.