RABL6

General Information

Gene Name : RABL6
Gene ID : ENSG00000196642.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RABL6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RABL6	ENSG00000196642.18	13.63	26.10	19.87	ENCSR000AEF
HepG2	RABL6	ENSG00000196642.18	107.07	47.50	77.28	ENCSR985KAT
K562	RABL6	ENSG00000196642.18	59.70	46.32	53.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RABL6 is not avaliable on ENCORE database.

Proteins bound to RNA

RABL6 RNA is bound by 79 proteins.

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eCLIP assay for RABL6 is not avaliable on ENCORE database.

79 proteins are bound to RABL6 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	139726390	139726426	+	intron-Distal,intron-Proximal	6.85228	400.00000	K562	AQR
chr9	139726436	139726461	+	intron-Distal	6.23375	86.73126	HepG2	XPO5
chr9	139726426	139726472	+	intron-Distal	7.23493	85.12075	K562	AQR
chr9	139726319	139726358	+	intron-Proximal	6.17271	83.45221	K562	AQR
chr9	139726358	139726390	+	intron-Proximal	6.06999	73.59884	K562	AQR
chr9	139718114	139718154	+	intron-Proximal	5.85327	67.91144	K562	AQR
chr9	139723935	139723970	+	CDS,intron-Proximal	6.78426	65.61654	K562	AQR
chr9	139723970	139723980	+	intron-Proximal	6.31413	64.24104	K562	AQR
chr9	139726682	139726756	+	CDS,intron-Proximal	5.86459	59.87710	K562	AQR
chr9	139702475	139702576	+	5'-UTR,intron-Distal	4.00543	52.92782	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 596 entries

eCLIP assay for RABL6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RABL6 is not available on ENCORE database.
167 RBPs can affect the levels of RABL6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RABL6 is not available on ENCORE database.

167 RBPs can affect the gene expression of RABL6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RABL6	ENSG00000196642.11	3933.71860	1435.72890	1.45400	86.75170	84.74300	HepG2	PTBP1
RABL6	ENSG00000196642.11	3470.74950	1130.09670	1.61870	80.33890	77.91580	HepG2	TRIM56
RABL6	ENSG00000196642.11	4626.57600	1494.59270	1.63010	70.68800	68.48030	HepG2	SF3B4
RABL6	ENSG00000196642.11	3891.30110	1852.15550	1.07090	67.13260	64.75780	HepG2	SLBP
RABL6	ENSG00000196642.11	3359.41720	1410.88180	1.25150	65.66520	63.44300	HepG2	PCBP1
RABL6	ENSG00000196642.11	3509.14470	1488.23630	1.23740	64.82990	62.69710	HepG2	RECQL
RABL6	ENSG00000196642.11	3726.92590	1597.74210	1.22190	58.64290	56.92190	HepG2	NELFE
RABL6	ENSG00000196642.11	2580.02240	1028.11120	1.32730	50.93030	48.00290	HepG2	PPIL4
RABL6	ENSG00000196642.11	4396.93690	1431.00150	1.61940	44.87320	42.54740	HepG2	IGF2BP2
RABL6	ENSG00000196642.11	4184.73250	1427.10810	1.55190	44.81600	42.32560	HepG2	HNRNPK
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 201 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RABL6 is not available on ENCORE database.

20 RBPs can affect the splicing of RABL6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RABL6	ENSG00000196642.11	chr9	+	139703706	139703881	139702412	139702778	139717976	139718111	-0.19900	0.00000	excluded	HepG2	HNRNPK
SE	RABL6	ENSG00000196642.11	chr9	+	139703706	139703881	139702412	139702778	139717976	139718111	-0.15600	0.00005	excluded	HepG2	QKI
SE	RABL6	ENSG00000196642.11	chr9	+	139703706	139703881	139702610	139702778	139717976	139718111	-0.24600	0.00000	excluded	HepG2	DDX3X
SE	RABL6	ENSG00000196642.11	chr9	+	139703706	139703881	139702412	139702778	139717976	139718111	-0.12900	0.00001	excluded	HepG2	UTP18
SE	RABL6	ENSG00000196642.11	chr9	+	139703706	139703881	139702412	139702778	139717976	139718111	-0.16600	0.00000	excluded	HepG2	EFTUD2
SE	RABL6	ENSG00000196642.11	chr9	+	139703706	139703881	139702412	139702778	139717976	139718111	-0.18200	0.00000	excluded	HepG2	DDX6
SE	RABL6	ENSG00000196642.11	chr9	+	139703706	139703881	139702412	139702778	139717976	139718111	-0.16300	0.00001	excluded	HepG2	PCBP2
A3SS	RABL6	ENSG00000196642.11	chr9	+	139733673	139733938	139733765	139733938	139733360	139733573	0.18500	0.00090	longer	K562	HNRNPUL1
RI	RABL6	ENSG00000196642.11	chr9	+	139726172	139726822	139726172	139726313	139726716	139726822	0.09500	0.00010	included	HepG2	SF3A3
RI	RABL6	ENSG00000196642.11	chr9	+	139726172	139726822	139726172	139726313	139726716	139726822	0.16200	0.00000	included	K562	EFTUD2

Showing 1 to 10 of 23 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RABL6

General Information

Functions

Localization

Domains (AlphaFold: RABL6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RABL6 is not avaliable on ENCORE database.

79 proteins are bound to RABL6 RNA:

eCLIP assay for RABL6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RABL6 is not available on ENCORE database.

167 RBPs can affect the gene expression of RABL6 :

The Knockdown/knockout RNA-Seq assay for RABL6 is not available on ENCORE database.

20 RBPs can affect the splicing of RABL6 :

The Knockdown/knockout RNA-Seq assay for RABL6 is not avaliable on ENCORE database.