GRWD1

General Information

Gene Name       : GRWD1
Gene ID             : ENSG00000105447.12
Essential Gene : Yes

Functions

Localization(RBPImage: GRWD1)

Domains (AlphaFold: GRWD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GRWD1ENSG00000105447.125.829.517.67ENCSR000AEF
HepG2GRWD1ENSG00000105447.1246.4814.3930.43ENCSR985KAT
K562GRWD1ENSG00000105447.1231.9716.4824.23ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 628ENCSR893NWBGRWD1HepG2ReleasedENCAB573ZJVENCSR835ZOK  
eCLIPeCLIP: 645ENCSR999YGPGRWD1K562ReleasedENCAB573ZJVENCSR251FMT  
knockdown followed by RNA-seq GRWD1-BGKLV21-K562ENCSR528ASXGRWD1K562ReleasedENCSR572FFX   shRNAKD% = 85.6,87.1
knockdown followed by RNA-seq GRWD1-BGHLV18-HepG2ENCSR850FEHGRWD1HepG2ReleasedENCSR674KEK   shRNAKD% = 71.8,77.1






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
GRWD1628HepG2ENCSR893NWBENCSR835ZOKENCAB573ZJVA301-576A1ReleasedENCODE3
GRWD1645K562ENCSR999YGPENCSR251FMTENCAB573ZJVA301-576A1ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
GRWD1ENCAB573ZJVA301-576A1Released, ENCODE3Released, ENCODE3BGHLV18-13, Released, ENCODE3BGKLV21-15, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
GRWD1K562shRNAENCSR528ASXENCSR572FFXGRWD1_BGKLV21_15_17564,GRWD1_BGKLV21_16_17565non-target_BGKLV21_1,non-target_BGKLV21_285.6,87.1ReleasedENCODE3
GRWD1HepG2shRNAENCSR850FEHENCSR674KEKGRWD1_BGHLV18_13,GRWD1_BGHLV18_14NT_BGHLV18_1,NT_BGHLV18_271.8,77.1ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    GRWD1: Click to RBP Image Database
  • Nuclei
  • Speckles
  • Cytoplasm
  • Compartment/Organelle
  • Mitochondria
  • Cytosolic
  • Mitotic-Apparatus (Spindle; Centrosomes)












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    GRWD1Product_ID: A301-576A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: GRWD1-human    		 HepG2_Bethyl_A301-576A_1_GRWD1.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using GRWD1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-GRWD1 antibody (lanes under 'GRWD1').
    		 GRWD1_Secondary_Western.png<br>Caption: Western blot following shRNA against GRWD1 in K562 and HepG2 whole cell lysate using GRWD1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 2 and 3 are two different shRNAs against GRWD1. Lanes 5-7 follow the same pattern, but in HepG2. GRWD1 protein appears as the green band, GAPDH serves as a control and appears in red.
    		 K562_Bethyl_A301-576A_1_GRWD1.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using GRWD1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-GRWD1 antibody (lanes under 'GRWD1').
    		 GRWD1_Secondary_Western.png<br>Caption: Western blot following shRNA against GRWD1 in K562 and HepG2 whole cell lysate using GRWD1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 2 and 3 are two different shRNAs against GRWD1. Lanes 5-7 follow the same pattern, but in HepG2. GRWD1 protein appears as the green band, GAPDH serves as a control and appears in red.








    RNA Targets
    • GRWD1 protein binds to 25,725 RNA regions.  





    Proteins bound to RNA
    • GRWD1 RNA is bound by 18 proteins.  






    GRWD1 protein has 25,725 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 25,725 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    GRWD1chr204769185847691896+3.580315.96568HepG2CSE1LCDS
    GRWD1chr172955630829556379+3.303564.25541HepG2NF13'-UTR,CDS
    GRWD1chr176521470865214751-3.989199.95292HepG2HELZCDS,intron-Distal,intron-Proximal
    GRWD1chr162366982723669939+3.164144.05316K562DCTN53'-UTR,CDS,intron-Distal,intron-Proximal
    GRWD1chr10113941479113941508-3.877087.50845HepG2GPAMCDS,intron-Distal
    GRWD1chr172705088427050899+3.571904.80070K562RPL23A3'-UTR,CDS,intron-Proximal
    GRWD1chr3183435437183435478+3.088854.73488HepG2YEATS2CDS,intron-Proximal
    GRWD1chr2102486788102486804+3.6254712.00603HepG2MAP4K4CDS
    GRWD1chr147528328575283341+4.301784.21087HepG2YLPM1CDS,intron-Distal
    GRWD1chr191090608410906179+3.4690414.14751K562DNM2CDS,intron-Proximal
    GRWD1chr191537521415375346-3.4792612.11621HepG2BRD4CDS,intron-Distal,intron-Proximal
    GRWD1chr1156339159156339205+3.9732811.39323HepG2RHBG5'-UTR,CDS
    GRWD1chrX150154522150154559+4.085133.12746HepG2HMGB3CDS,intron-Proximal
    GRWD1chrX4867428648674319+3.261606.24463HepG2HDAC6CDS,intron-Proximal
    GRWD1chr81782353217823570+3.7850112.46287HepG2PCM1CDS
    GRWD1chr46919851169198556-3.421006.81726HepG2YTHDC1CDS,intron-Distal,intron-Proximal
    GRWD1chr79969546399695537-4.372796.84754HepG2MCM7CDS,intron-Distal,intron-Proximal
    GRWD1chr12125398171125398237-3.1860615.84509HepG2UBCCDS,intron-Distal
    GRWD1chr47170544271705504-3.082723.60157HepG2GRSF1CDS,intron-Distal
    GRWD1chr1154527903154527963-4.007524.01763HepG2UBE2Q1CDS,intron-Distal,intron-Proximal
    GRWD1chr193621411936214165+3.420054.71371HepG2KMT2BCDS
    GRWD1chr673017917301806-3.073064.87903HepG2SSR1CDS,intron-Distal,intron-Proximal
    GRWD1chr1983268868326953+3.160815.74981HepG2CERS4CDS
    GRWD1chr14104121031104121165+3.118467.08636K562RP11-73M18.2, KLC1CDS,intron-Proximal
    GRWD1chr10135213083135213148+3.7966817.67867HepG2RP11-108K14.8, MTG1CDS,intron-Distal,intron-Proximal
    GRWD1chr162981612529816187+3.029436.44086K562KIF223'-UTR,CDS,intron-Proximal
    GRWD1chr8103372295103372372-3.216887.75618HepG2UBR5CDS,intron-Distal,intron-Proximal
    GRWD1chr205728754357287646+3.9365112.30450HepG2NPEPL1, STX16-NPEPL13'-UTR,CDS,intron-Proximal
    GRWD1chr125668025956680354-3.122836.07026HepG2RP11-977G19.10, CS3'-UTR,intron-Distal,intron-Proximal
    GRWD1chr165780378857803858-3.915513.38114HepG2KIFC3CDS,intron-Distal
    GRWD1chr206231715262317241+3.054769.29863HepG2RTEL1-TNFRSF6B, RTEL1CDS,intron-Proximal
    GRWD1chr161509222015092256+3.4206919.63699HepG2PDXDC1CDS
    GRWD1chr51428702514287148+3.0147210.39798HepG2TRIOCDS
    GRWD1chr1985284768528510+5.5725018.58407HepG2HNRNPM5'-UTR,CDS,intron-Proximal
    GRWD1chr2198267686198267718-3.3449210.84303HepG2SF3B1CDS,intron-Distal
    GRWD1chr63604070536040760+4.054084.01763HepG2MAPK14CDS,intron-Distal,intron-Proximal
    GRWD1chr203405987534059877+3.454414.41784HepG2CEP250CDS,intron-Proximal
    GRWD1chr162999776729997829+4.461566.03821HepG2TAOK2CDS,intron-Proximal
    GRWD1chr111449733514497375-3.713803.22245K562COPB1CDS,intron-Distal
    GRWD1chr6111345406111345479+3.584334.45064HepG2RPF23'-UTR,CDS
    GRWD1chr113336761333693-3.918107.52043HepG2CCNL25'-UTR,CDS,intron-Distal,intron-Proximal
    GRWD1chr5145862228145862291+3.366329.58775HepG2TCERG1CDS,intron-Proximal
    GRWD1chr2087199628719990+5.021639.57147HepG2PLCB1CDS
    GRWD1chr1191722329172296-4.291043.82000HepG2DENND5A3'-UTR,CDS,intron-Distal,intron-Proximal
    GRWD1chr109149719291497280+4.041763.88696K562KIF20BCDS
    GRWD1chr1230778386230778455+3.969123.60441HepG2COG25'-UTR,CDS,intron-Proximal
    GRWD1chr224328960543289620-3.777573.02919K562PACSIN23'-UTR,CDS,intron-Distal,intron-Proximal
    GRWD1chr33840710238407188+3.758308.61056HepG2XYLB5'-UTR,CDS
    GRWD1chr174523696945237145-3.372797.03584HepG2CDC27intron-Distal
    GRWD1chr173687308436873111+3.515407.24602HepG2MLLT6CDS
    GRWD1chr1182828189182828240+3.567285.48341K562DHX9CDS
    GRWD1chr11292597292670+3.529487.72583K562ATHL1CDS
    GRWD1chrX5340659253406626-3.139043.17744HepG2SMC1A3'-UTR,intron-Distal
    GRWD1chr79428577594285805+4.2231982.04157HepG2PEG105'-UTR
    GRWD1chr1129933322993340-3.322415.73981HepG2NAP1L4CDS,intron-Distal,intron-Proximal
    GRWD1chr1921147802114822-3.143283.28147K562AP3D1CDS,intron-Distal,intron-Proximal
    GRWD1chrX153647881153647972+4.107957.11560HepG2TAZ3'-UTR,CDS,intron-Distal,intron-Proximal
    GRWD1chr77622112176221196+3.054083.41665HepG2AC004980.7, UPK3Bintron-Distal
    GRWD1chr11114320724114320819+3.404304.65365HepG2REXO23'-UTR
    GRWD1chr8145107238145107254-3.867413.38114HepG2OPLAHintron-Distal,intron-Proximal
    GRWD1chr22409070824090812-3.983997.06029HepG2ATAD2BCDS,intron-Distal,intron-Proximal
    GRWD1chr117172922871729250-4.479386.03821HepG2NUMA1CDS,intron-Distal,intron-Proximal
    GRWD1chr3172048488172048502+3.447727.52317HepG2FNDC3BCDS
    GRWD1chr13565283735652845-6.9760024.76997HepG2SFPQCDS,intron-Distal
    GRWD1chr173393278633932847+3.011674.75490HepG2AP2B13'-UTR,5'-UTR,CDS,intron-Distal
    GRWD1chr143507728235077326-3.254043.80299HepG2SNX65'-UTR,CDS,intron-Distal
    GRWD1chr1129859192985938-4.028806.62597HepG2NAP1L4CDS,intron-Distal,intron-Proximal
    GRWD1chr193994414439944162+3.039365.26653K562SUPT5HCDS,intron-Proximal
    GRWD1chr34771823247718272-3.029625.35432HepG2SMARCC1CDS,intron-Distal
    GRWD1chr1628127552812809+3.3145823.96253HepG2SRRM2CDS
    GRWD1chr73646234636462413+5.066295.82083HepG2ANLNCDS,intron-Distal
    GRWD1chr12556911425569145-4.549055.18972HepG2C1orf633'-UTR,CDS,intron-Distal
    GRWD1chr55218950352189559+3.898113.60441HepG2ITGA1CDS,intron-Proximal
    GRWD1chr174296264242962703-4.068238.97406HepG2EFTUD23'-UTR,CDS,intron-Distal,intron-Proximal
    GRWD1chr93572042935720437-4.480304.45558HepG2TLN1CDS,intron-Distal,intron-Proximal
    GRWD1chr155251578852515830-3.263474.24070HepG2MYO5C3'-UTR,CDS,intron-Distal
    GRWD1chr99011398090114077+4.4524912.08553HepG2DAPK15'-UTR,CDS,intron-Proximal
    GRWD1chr7141362384141362504-3.185043.40321HepG2KIAA11473'-UTR,CDS,intron-Distal
    GRWD1chr8103293518103293566-3.017945.12345HepG2UBR5CDS,intron-Distal
    GRWD1chr125655375856553774+3.259094.91547HepG2MYL6CDS,intron-Proximal
    GRWD1chr204590505445905079-4.4789615.06605HepG2ZMYND8CDS,intron-Distal,intron-Proximal
    GRWD1chr177120285071202956+3.542867.97516HepG2COG1CDS
    GRWD1chr63317033633170377+3.0189710.60071K562SLC39A7CDS,intron-Proximal
    GRWD1chr201793762417937681-3.0720722.11585HepG2SNX5, OVOL2CDS,intron-Distal,intron-Proximal
    GRWD1chr2197654638197654795-3.804586.15582K562GTF3C33'-UTR,CDS,intron-Distal,intron-Proximal
    GRWD1chr142183303221833085-3.549745.03432K562SUPT16HCDS,intron-Distal
    GRWD1chr2242207917242207950-3.3901815.99770HepG2HDLBP3'-UTR,5'-UTR,intron-Distal
    GRWD1chr115756395557564010+3.295467.66537HepG2CTNND1CDS,intron-Distal
    GRWD1chr2112638349112638417-3.557935.67466K562ANAPC15'-UTR,CDS,intron-Distal
    GRWD1chr191121809211218119+3.573844.88141HepG2LDLRCDS
    GRWD1chr167544643575446469-3.099385.57447HepG2CFDP1CDS,intron-Distal
    GRWD1chr223668431836684390-4.4275630.18303HepG2MYH9CDS,intron-Distal
    GRWD1chrX128599849128599882-3.4944915.07735HepG2SMARCA1CDS,intron-Distal
    GRWD1chr132590560625905686+3.543145.14253HepG2NUPL1CDS
    GRWD1chr3193343926193343978+3.820493.56019HepG2OPA1CDS,intron-Distal
    GRWD1chr167071370970713771-3.2852523.26995HepG2MTSS1LCDS,intron-Distal
    GRWD1chr142184152321841558-4.9524912.43287HepG2SUPT16HCDS,intron-Distal
    GRWD1chr7107002488107002555-3.599063.05298K562COG5CDS,intron-Distal,intron-Proximal
    GRWD1chr225086191050861942+3.467996.92194HepG2PPP6R2CDS
    GRWD1chr1113242541113242606+3.042366.42929HepG2MOV10CDS,intron-Proximal




    18 proteins are bound to GRWD1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr194895822048958295+3'-UTR5.504179.83537HepG2PCBP2
    chr194895786048957954+3'-UTR5.196968.84739HepG2HNRNPK
    chr194895864048958720+3'-UTR5.224435.94928K562UPF1
    chr194895681448956918+3'-UTR4.591388.81141HepG2UPF1
    chr194895848448958565+3'-UTR4.137624.18579K562MATR3
    chr194896012548960176+3'-UTR,intron-Distal3.922394.24288K562UPF1
    chr194896026448960313+3'-UTR,intron-Distal3.363176.98582K562UPF1
    chr194895821248958426+3'-UTR4.4529022.92900HepG2PTBP1
    chr194895679848956868+3'-UTR5.140447.35154K562UPF1
    chr194895827248958333+3'-UTR5.3215629.18822K562PTBP1
    chr194895850748958571+3'-UTR4.363667.88692HepG2PTBP1
    chr194895659548956654+3'-UTR3.934184.87320K562UPF1
    chr194895840148958469+3'-UTR4.0173510.46407K562PTBP1
    chr194895846948958591+3'-UTR5.2529527.67296K562PTBP1
    chr194895822448958315+3'-UTR4.825747.29443K562MATR3
    chr194895831548958431+3'-UTR4.095847.66179K562MATR3
    chr194895682548956936+3'-UTR3.615385.96813HepG2AKAP1
    chr194895789348957971+3'-UTR3.269123.86715K562HNRNPK
    chr194895782648957906+3'-UTR4.616734.42259HepG2DDX59
    chr194895809448958176+3'-UTR4.0359810.98899HepG2PTBP1
    chr194895688948956955+3'-UTR3.710655.65632K562UPF1
    chr194895808248958185+3'-UTR4.1558727.43716K562PTBP1
    chr194895879748958869+3'-UTR,5'-UTR3.937413.40229HepG2CSTF2T
    chr194895833348958399+3'-UTR6.3258032.00158K562PTBP1
    chr194895821448958272+3'-UTR4.759169.23478K562PTBP1
    chr194895790648957988+3'-UTR4.043235.10672HepG2DDX59
    chr194895654248956647+3'-UTR3.579774.27354HepG2UPF1
    chr194894925748949425+5'-UTR,CDS,intron-Distal,intron-Proximal3.054086.21281HepG2GRWD1
    chr194894971748949758+5'-UTR,CDS4.127123.79199HepG2PPIG
    chr194894943848949500+CDS,intron-Distal,intron-Proximal3.999845.34978HepG2PRPF8
    chr194894927148949350+CDS,intron-Distal3.313523.12941K562UCHL5
    chr194895006348950137+CDS,intron-Proximal4.222716.60804HepG2PRPF8
    chr194894996248950111+CDS,intron-Proximal3.7920611.16705K562UCHL5
    chr194894996748950096+CDS4.375925.43131HepG2SRSF1
    chr194895604448956090+CDS3.944453.48187K562RBM15
    chr194895362048953694+CDS3.727944.68902HepG2PPIG
    chr194895000448950097+CDS4.248657.27704K562ZNF622
    chr194894998748950072+CDS4.332274.59919HepG2AQR
    chr194894995048950087+CDS4.767806.45870K562GRWD1
    chr194895001848950085+CDS4.539237.35664HepG2BUD13
    chr194895351848953570+intron-Proximal4.798914.90235K562SF3B4
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    The GRWD1 protein binds to its own RNA.

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    GRWD1chr194894925748949425+3.054086.21281HepG2GRWD15'-UTR,CDS,intron-Distal,intron-Proximal
    GRWD1chr194894995048950087+4.767806.45870K562GRWD1CDS


    Diffrential Expression
    • 281 differentially expressed genes after Knockdown/Knockout GRWD1 protein.  





    • 93 RBPs can affect the levels of GRWD1.  







    281 differentially expressed genes after Knockdown/Knockout GRWD1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 281 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    ACSM3ENSG00000005187.71191.49290787.806900.596804.708602.32380HepG2GRWD1
    CD74ENSG00000019582.101975.884101237.550800.674906.436103.72680HepG2GRWD1
    BTN3A1ENSG00000026950.12690.18730441.683300.643904.720102.32610HepG2GRWD1
    C6ENSG00000039537.952.0835013.642901.932604.103301.80700HepG2GRWD1
    COL9A2ENSG00000049089.9480.23490748.83710-0.640904.188901.87940HepG2GRWD1
    ITIH4ENSG00000055955.11194.8359036.292502.4244016.4276012.91010HepG2GRWD1
    SLC2A3ENSG00000059804.114371.9281010783.24770-1.302504.907002.46880HepG2GRWD1
    CTSAENSG00000064601.124594.615603221.856700.512004.159301.85360HepG2GRWD1
    ACSM2BENSG00000066813.10703.93530310.722001.1797012.695009.37390HepG2GRWD1
    AP1M1ENSG00000072958.4425.97380686.87190-0.689305.445502.90250HepG2GRWD1
    MBNL3ENSG00000076770.1013513.661808932.272000.597204.245001.93170HepG2GRWD1
    CAPZBENSG00000077549.131101.306301882.57370-0.773508.682005.79660HepG2GRWD1
    PEBP1ENSG00000089220.49465.616806529.220600.535705.110402.62870HepG2GRWD1
    APOHENSG00000091583.647021.3099033765.732600.477704.871602.44860HepG2GRWD1
    C19orf77ENSG00000095932.5450.27280182.095901.3060012.085408.83690HepG2GRWD1
    PGCENSG00000096088.126668.516003870.292700.7848010.793807.73230HepG2GRWD1
    PALMDENSG00000099260.6548.05210366.716900.579503.622101.46160HepG2GRWD1
    MKNK2ENSG00000099875.10622.58220893.34420-0.521003.678601.50070HepG2GRWD1
    SGK2ENSG00000101049.10277.25800144.051100.944505.810603.18050HepG2GRWD1
    TUBB1ENSG00000101162.3638.275501151.19230-0.850905.290102.76010HepG2GRWD1
    SLCO4A1ENSG00000101187.11335.16990535.81150-0.676804.729702.33100HepG2GRWD1
    ARFGAP1ENSG00000101199.81661.061102456.30700-0.564403.988501.73320HepG2GRWD1
    E2F1ENSG00000101412.9511.00710777.73180-0.605903.445401.32340HepG2GRWD1
    CORO1AENSG00000102879.1143.69180101.53030-1.216504.299801.97860HepG2GRWD1
    KIAA1199ENSG00000103888.11885.724801301.23490-0.555003.582701.42970HepG2GRWD1
    NDRG1ENSG00000104419.103888.757007639.53660-0.974204.703102.32280HepG2GRWD1
    DOT1LENSG00000104885.13426.41640818.36100-0.940509.578206.59590HepG2GRWD1
    SULT2A1ENSG00000105398.32797.082402015.540900.472704.096801.80620HepG2GRWD1
    GRWD1ENSG00000105447.8100.55390336.31880-1.741905.624303.03990HepG2GRWD1
    CYP3A5ENSG00000106258.9305.55410164.344400.894605.149402.64420HepG2GRWD1
    PBLDENSG00000108187.1199.3499044.653101.153703.511301.37920HepG2GRWD1
    SLC16A6ENSG00000108932.7286.46810174.917700.711603.755401.55720HepG2GRWD1
    SULT1E1ENSG00000109193.6118.1080023.130902.3521010.964707.88090HepG2GRWD1
    ODAMENSG00000109205.12890.84330628.343800.503503.419201.30470HepG2GRWD1
    CPT1AENSG00000110090.81296.19820866.214800.581404.858402.44040HepG2GRWD1
    HPXENSG00000110169.6391.59950245.729200.672204.101301.80700HepG2GRWD1
    ARPC3ENSG00000111229.112334.883701448.018200.689207.663904.88110HepG2GRWD1
    SCNN1AENSG00000111319.8409.36390610.32200-0.576203.811501.59510HepG2GRWD1
    BTN3A3ENSG00000111801.11267.93230158.606100.756303.874401.63240HepG2GRWD1
    GCNT2ENSG00000111846.11869.09840504.962100.783207.791704.99740HepG2GRWD1
    CCR6ENSG00000112486.10315.40060199.682700.659403.629901.46610HepG2GRWD1
    GMDSENSG00000112699.61066.680401632.35640-0.613804.907902.46880HepG2GRWD1
    C7ENSG00000112936.14248.16290114.746801.112703.977301.72530HepG2GRWD1
    ARRDC3ENSG00000113369.4487.69260288.891700.755305.315302.77880HepG2GRWD1
    COL7A1ENSG00000114270.11314.85050514.34010-0.708103.845101.61870HepG2GRWD1
    GGCXENSG00000115486.72639.839901785.739000.563805.462502.90610HepG2GRWD1
    IL1R1ENSG00000115594.74235.583803000.961800.497004.823602.41040HepG2GRWD1
    EPAS1ENSG00000116016.91819.855702748.70860-0.594905.565202.98800HepG2GRWD1
    ARID3AENSG00000116017.61685.195702357.75400-0.484504.085301.79830HepG2GRWD1
    TNFSF4ENSG00000117586.6417.34230261.508700.674304.106701.80700HepG2GRWD1
    SPP1ENSG00000118785.96368.345802461.931001.371007.513404.75300HepG2GRWD1
    CATENSG00000121691.41746.338701247.250300.485503.886901.64160HepG2GRWD1
    TNFSF10ENSG00000121858.6495.03360315.459800.650004.334802.00970HepG2GRWD1
    NR4A1ENSG00000123358.1579.35830156.05990-0.975603.795601.58230HepG2GRWD1
    C4BPAENSG00000123838.62429.47330895.464501.4398028.8959024.72270HepG2GRWD1
    C4BPBENSG00000123843.81922.569801240.595600.631906.171903.50830HepG2GRWD1
    AIF1LENSG00000126878.8719.25480486.762800.563203.520401.38580HepG2GRWD1
    COX7CENSG00000127184.61887.153201374.356200.457403.413101.30340HepG2GRWD1
    TSPAN8ENSG00000127324.4108.5700049.361201.137103.715301.52600HepG2GRWD1
    LBPENSG00000129988.533.344706.629302.330403.576101.42570HepG2GRWD1
    EIF3GENSG00000130811.6878.645501215.09120-0.467703.537601.40040HepG2GRWD1
    SERPINF1ENSG00000132386.613266.902109995.182800.408403.420701.30470HepG2GRWD1
    SPIRE1ENSG00000134278.10231.89010378.10500-0.705303.830001.61050HepG2GRWD1
    PHC2ENSG00000134686.121218.545401804.18680-0.566205.118302.62870HepG2GRWD1
    DRAM1ENSG00000136048.9838.624701197.40770-0.513803.673901.49890HepG2GRWD1
    CIDEBENSG00000136305.71864.35670999.713700.8990011.033707.92650HepG2GRWD1
    BAATENSG00000136881.7325.70920188.991300.785204.576502.21400HepG2GRWD1
    IER3ENSG00000137331.11595.836501048.03220-0.814704.495802.15450HepG2GRWD1
    CCDC90BENSG00000137500.5589.00790375.824900.648104.776202.37270HepG2GRWD1
    SLC40A1ENSG00000138449.61982.794401182.109600.746108.399405.56840HepG2GRWD1
    MTTPENSG00000138823.85220.656603878.666200.428603.870701.63200HepG2GRWD1
    ERP27ENSG00000139055.2219.2883066.272401.7262012.151408.86800HepG2GRWD1
    COL2A1ENSG00000139219.13728.705501122.14550-0.622905.208202.68450HepG2GRWD1
    BNIP2ENSG00000140299.7531.27880944.14570-0.829507.599704.82820HepG2GRWD1
    NLRC5ENSG00000140853.11239.89610132.827500.852803.757401.55720HepG2GRWD1
    TMC6ENSG00000141524.11378.27390607.34080-0.683105.150202.64420HepG2GRWD1
    EPHA2ENSG00000142627.9631.48460967.17900-0.615004.711202.32380HepG2GRWD1
    RORCENSG00000143365.12329.10000169.196100.959704.487302.15010HepG2GRWD1
    EPHX1ENSG00000143819.81429.25000862.912600.727906.808304.07920HepG2GRWD1
    SCN1AENSG00000144285.111388.52570930.367400.577604.694502.31880HepG2GRWD1
    OSBPL10ENSG00000144645.9463.59650688.75530-0.571103.678501.50070HepG2GRWD1
    ALDH1L1ENSG00000144908.9534.72660342.065700.644403.866201.63080HepG2GRWD1
    BHMTENSG00000145692.10156.3369053.997501.533607.843005.02460HepG2GRWD1
    SLC22A3ENSG00000146477.4857.07520592.384800.532803.664001.49440HepG2GRWD1
    A1CFENSG00000148584.101225.376702143.15790-0.806509.268306.30370HepG2GRWD1
    SAA4ENSG00000148965.4642.83550446.083300.527003.408201.30340HepG2GRWD1
    SERPING1ENSG00000149131.111442.05300757.865200.9280011.518208.35980HepG2GRWD1
    UHMK1ENSG00000152332.111772.303801161.968400.609004.510702.16520HepG2GRWD1
    PIK3AP1ENSG00000155629.10316.54780150.076501.076606.025303.37040HepG2GRWD1
    PDIA4ENSG00000155660.66607.949809673.91630-0.549905.789403.16730HepG2GRWD1
    TSPAN7ENSG00000156298.81443.62530941.620600.616405.709403.11030HepG2GRWD1
    TMED6ENSG00000157315.4160.7785088.563000.860203.424601.30510HepG2GRWD1
    MPZENSG00000158887.11542.85840809.30370-0.576104.250201.93300HepG2GRWD1
    C1RENSG00000159403.11209.3839092.861501.172906.320303.62980HepG2GRWD1
    CYP3A7ENSG00000160870.8380.61590130.070301.5489014.9173011.50900HepG2GRWD1
    BDH1ENSG00000161267.7654.24070382.614600.773805.741703.12830HepG2GRWD1
    C1orf115ENSG00000162817.61974.479801303.654700.598805.823603.18540HepG2GRWD1
    SLC2A2ENSG00000163581.91297.47200774.332800.744607.137304.38750HepG2GRWD1
    TMEM41AENSG00000163900.6832.34360573.843800.536403.781901.57160HepG2GRWD1
    ACSL6ENSG00000164398.8250.87970108.742401.206006.246003.56470HepG2GRWD1
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    93 RBPs can affect the gene expression of GRWD1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    GRWD1ENSG00000105447.81100.77350537.388901.034407.166906.35500HepG2AKAP1
    GRWD1ENSG00000105447.8585.71240444.612400.397502.100501.41170HepG2ASCC1
    GRWD1ENSG00000105447.8874.89250671.343600.382002.667802.07930HepG2BOP1
    GRWD1ENSG00000105447.8492.97570671.04530-0.444904.818203.98670HepG2CKAP4
    GRWD1ENSG00000105447.8307.17030616.31720-1.0046010.788709.52330HepG2CPSF6
    GRWD1ENSG00000105447.8318.51370507.44010-0.671904.228602.68000HepG2DDX27
    GRWD1ENSG00000105447.8859.54910514.709700.739706.689105.75840HepG2DDX3X
    GRWD1ENSG00000105447.8614.78290442.306900.474902.581601.98460HepG2DDX6
    GRWD1ENSG00000105447.8430.87660303.094900.507404.501603.70520HepG2DNAJC2
    GRWD1ENSG00000105447.8633.27110491.430200.365702.445501.34940HepG2EIF2S2
    GRWD1ENSG00000105447.8712.28690469.643100.600802.346701.75630HepG2EIF4A3
    GRWD1ENSG00000105447.8678.60230457.410600.569003.067702.34600HepG2EIF4B
    GRWD1ENSG00000105447.8892.61930655.876500.444503.903802.91140HepG2EWSR1
    GRWD1ENSG00000105447.8289.34640451.44370-0.641704.148802.61510HepG2FKBP4
    GRWD1ENSG00000105447.8846.53620474.083500.836308.531107.37130HepG2FXR1
    GRWD1ENSG00000105447.8347.80200254.949000.448002.179801.39100HepG2GEMIN5
    GRWD1ENSG00000105447.8439.46050698.60850-0.668805.071204.22090HepG2GPKOW
    GRWD1ENSG00000105447.8100.55390336.31880-1.741905.624303.03990HepG2GRWD1
    GRWD1ENSG00000105447.8711.70230445.481300.675805.853004.86590HepG2HNRNPK
    GRWD1ENSG00000105447.8428.27360666.69810-0.638505.072304.24630HepG2HNRNPLL
    GRWD1ENSG00000105447.8575.73600451.334200.351102.217001.36480HepG2HNRNPM
    GRWD1ENSG00000105447.8496.36440341.122000.541003.993603.27650HepG2HNRNPU
    GRWD1ENSG00000105447.8656.60890446.860400.555103.847903.06360HepG2IGF2BP2
    GRWD1ENSG00000105447.8897.57820474.250100.9203010.169708.93600HepG2MAGOH
    GRWD1ENSG00000105447.81494.13660476.866401.6476030.3462028.43680HepG2MATR3
    GRWD1ENSG00000105447.8412.80720680.02220-0.720104.168902.96490HepG2MTPAP
    GRWD1ENSG00000105447.8924.42680488.068500.921409.944908.78840HepG2NCBP2
    GRWD1ENSG00000105447.8719.89310562.471900.355902.542201.81210HepG2NOL12
    GRWD1ENSG00000105447.8773.82650498.251100.635002.536401.49370HepG2NONO
    GRWD1ENSG00000105447.8357.66670591.18090-0.725005.969404.89730HepG2NSUN2
    GRWD1ENSG00000105447.8567.22660434.515100.384402.000101.37780HepG2PABPC4
    GRWD1ENSG00000105447.8807.78380491.211100.7175010.668109.60240HepG2PCBP1
    GRWD1ENSG00000105447.8315.44510418.25490-0.407002.142801.42780HepG2PRPF8
    GRWD1ENSG00000105447.8760.30910499.799500.605107.058406.26620HepG2PTBP1
    GRWD1ENSG00000105447.8946.40590570.066100.7312015.9031014.72070HepG2PUM1
    GRWD1ENSG00000105447.81214.89860968.081700.327502.637402.12870HepG2RBM22
    GRWD1ENSG00000105447.8848.84210556.250600.609707.496406.68300HepG2NELFE
    GRWD1ENSG00000105447.8631.96670518.032400.286701.829501.31340HepG2RECQL
    GRWD1ENSG00000105447.8446.53480278.634400.680305.284204.46580HepG2RPS19
    GRWD1ENSG00000105447.8624.63270403.111400.631702.297801.32450HepG2RPS5
    GRWD1ENSG00000105447.81263.16480642.895700.9743010.202808.84190HepG2SF3A3
    GRWD1ENSG00000105447.8528.46330354.259100.576906.207305.30400HepG2SMN1
    GRWD1ENSG00000105447.8585.92260347.204900.754805.090103.76140HepG2SMNDC1
    GRWD1ENSG00000105447.8405.45670734.23860-0.856705.853604.70960HepG2SNRNP70
    GRWD1ENSG00000105447.8807.69640543.168600.572306.905306.24050HepG2SRSF1
    GRWD1ENSG00000105447.8845.77660530.238000.6735010.917009.78530HepG2SRSF5
    GRWD1ENSG00000105447.8710.44860949.30430-0.418105.157904.50050HepG2SSB
    GRWD1ENSG00000105447.81014.72850602.976900.750806.888105.98420HepG2SUCLG1
    GRWD1ENSG00000105447.8340.45860539.91950-0.665304.767203.91610HepG2SUPV3L1
    GRWD1ENSG00000105447.8305.31740488.16800-0.677106.619205.81660HepG2TAF15
    GRWD1ENSG00000105447.8509.37560649.91730-0.351502.057301.41980HepG2TARDBP
    GRWD1ENSG00000105447.8174.84050361.85760-1.049407.988806.46770HepG2TFIP11
    GRWD1ENSG00000105447.8515.52240334.427500.624206.576705.77300HepG2TRIM56
    GRWD1ENSG00000105447.8954.25640550.457400.7936014.4416013.23400HepG2UTP3
    GRWD1ENSG00000105447.8341.98260498.15450-0.542705.162004.29330HepG2ZC3H8
    GRWD1ENSG00000105447.8725.10210552.385600.392402.737201.56300K562AARS
    GRWD1ENSG00000105447.8670.22590493.842400.440503.935303.28040K562AGGF1
    GRWD1ENSG00000105447.8742.00400513.858700.530004.416203.58480K562AKAP8L
    GRWD1ENSG00000105447.82110.536601364.964200.628608.988406.67060K562APOBEC3C
    GRWD1ENSG00000105447.8528.15440687.57540-0.380602.249801.46830K562BOP1
    GRWD1ENSG00000105447.8759.353401003.11520-0.401603.450401.74170K562CEBPZ
    GRWD1ENSG00000105447.8475.58940731.12180-0.620405.727804.60650K562CPSF6
    GRWD1ENSG00000105447.81815.849401095.057400.7295017.8273016.30210K562DDX47
    GRWD1ENSG00000105447.8725.10840552.991000.390803.369902.39040K562DKC1
    GRWD1ENSG00000105447.81014.29810674.036000.589505.263003.98240K562EFTUD2
    GRWD1ENSG00000105447.8869.71770517.767800.748104.569703.24740K562EIF3A
    GRWD1ENSG00000105447.8965.94560721.535500.420802.470101.49910K562EIF3D
    GRWD1ENSG00000105447.8831.03400360.115801.2063023.4993021.16620K562EIF3G
    GRWD1ENSG00000105447.8710.11230445.091600.673806.717505.45120K562EIF4A3
    GRWD1ENSG00000105447.81916.274201546.878600.308803.858702.75170K562EIF4G2
    GRWD1ENSG00000105447.8816.995801162.61430-0.509003.356901.53860K562ESF1
    GRWD1ENSG00000105447.8224.51200385.26180-0.779005.986403.52870K562FASTKD2
    GRWD1ENSG00000105447.8551.00290743.83750-0.432902.051701.31140K562FMR1
    GRWD1ENSG00000105447.8209.42900318.38110-0.604302.764501.42620K562FUS
    GRWD1ENSG00000105447.81462.91020462.875501.6600029.3209027.48440K562FXR1
    GRWD1ENSG00000105447.8107.40930243.09410-1.178407.083705.83800K562G3BP2
    GRWD1ENSG00000105447.8185.13270525.33000-1.5047021.4936017.13440K562GRWD1
    GRWD1ENSG00000105447.81243.72250899.356900.467603.162402.16190K562HNRNPM
    GRWD1ENSG00000105447.8515.65080378.219300.447102.200601.31540K562IGF2BP2
    GRWD1ENSG00000105447.8347.04680595.99530-0.780205.254803.91420K562KRR1
    GRWD1ENSG00000105447.8955.21080397.241001.2657024.7698021.98570K562MAGOH
    GRWD1ENSG00000105447.8733.78490396.396700.8883012.0659010.00560K562MATR3
    GRWD1ENSG00000105447.8895.880001148.32330-0.358202.601601.87480K562NSUN2
    GRWD1ENSG00000105447.8709.27680353.400001.0049012.9288010.70220K562PCBP2
    GRWD1ENSG00000105447.8824.383701208.55980-0.551904.609703.53820K562PCBP3
    GRWD1ENSG00000105447.8740.61550927.01530-0.323902.400401.65620K562POLR2G
    GRWD1ENSG00000105447.81544.99570655.918501.2359022.6190020.46220K562PRPF8
    GRWD1ENSG00000105447.81341.00400385.963401.7967055.5218052.69170K562PTBP1
    GRWD1ENSG00000105447.82532.229601687.785000.585208.496307.05890K562PUF60
    GRWD1ENSG00000105447.8869.60240509.655100.770707.792806.92800K562PUS1
    GRWD1ENSG00000105447.8683.89300496.542100.461803.942903.25070K562RBM15
    GRWD1ENSG00000105447.8887.10410369.954801.2617021.8366019.23820K562RBM22
    GRWD1ENSG00000105447.8525.81270360.740900.543503.697502.01290K562RBM34
    GRWD1ENSG00000105447.8996.84700668.015900.577404.177303.17200K562RPS19
    GRWD1ENSG00000105447.81319.57160825.965500.675805.220603.73080K562SAFB
    GRWD1ENSG00000105447.8386.44640252.822600.612004.721203.59320K562SF3B4
    GRWD1ENSG00000105447.8219.51800330.67210-0.591103.365201.58820K562SND1
    GRWD1ENSG00000105447.8817.85340378.401101.1118017.8039016.03390K562SRSF1
    GRWD1ENSG00000105447.8407.71120273.483000.576003.505602.30100K562SRSF4
    GRWD1ENSG00000105447.8233.14960371.47060-0.672004.909903.12970K562SSB
    GRWD1ENSG00000105447.81024.555201434.58440-0.485604.487802.70870K562SSRP1
    GRWD1ENSG00000105447.8910.464301312.09530-0.527204.663502.96480K562STAU1
    GRWD1ENSG00000105447.81389.54810929.808400.579508.048306.63950K562SYNCRIP
    GRWD1ENSG00000105447.8781.20050382.905501.0286010.520608.99340K562TARDBP
    GRWD1ENSG00000105447.8362.26240578.84750-0.676105.138902.88720K562TFIP11
    GRWD1ENSG00000105447.8532.99710369.371700.529004.087303.06500K562TIA1
    GRWD1ENSG00000105447.8376.32130521.26140-0.470002.673401.75530K562TIAL1
    GRWD1ENSG00000105447.81506.712401902.79910-0.336703.097101.60750K562UBE2L3
    GRWD1ENSG00000105447.8487.24820672.03370-0.463903.224402.12150K562UCHL5
    GRWD1ENSG00000105447.8928.907801217.58190-0.390402.097201.46550K562UPF1
    GRWD1ENSG00000105447.8705.971601041.86200-0.561504.228803.13810K562WDR3
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    25 alternative splicing events after Knockdown/Knockout GRWD1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 25 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEACSL4ENSG00000068366.15chrX-1089342311089343601089263641089266011089393721089394250.098000.000000.01289includedHepG2GRWD1
    SEMYL6ENSG00000092841.14chr12+5655440956554454565540265655410456555170565553710.130000.000000.00017includedHepG2GRWD1
    SESEC31AENSG00000138674.12chr4-8378278383782861837788418377891783784470837845450.214000.000000.00002includedHepG2GRWD1
    SEWARSENSG00000140105.13chr14-1008416191008417431008354231008355951008425961008426460.172000.000080.09747includedHepG2GRWD1
    SELMO7ENSG00000136153.15chr13+7638328976383319763784247637867776391296763914140.195000.000000.00298includedHepG2GRWD1
    SETIAF1ENSG00000221995.4chr17-2741262127412666274093332740945627413455274135950.257000.000020.03354includedHepG2GRWD1
    SEZFAND5ENSG00000107372.8chr9-7497838574978522749755437497570374979611749801130.202000.000060.07205includedHepG2GRWD1
    SEGOLGA2ENSG00000167110.12chr9-1310350631310351441310306981310308031310361281310362510.186000.000010.01426includedHepG2GRWD1
    SECD46ENSG00000117335.14chr1+2079635972079636902079589632079590272079668632079688580.127000.000020.03150includedHepG2GRWD1
    SEGPR126ENSG00000112414.10chr6+1427620441427620901427593481427595011427644731427674030.145000.000010.02402includedHepG2GRWD1
    SESLC39A14ENSG00000104635.9chr8+2226961022269719222674582226762822272292222724150.093000.000010.01967includedHepG2GRWD1
    SECLSTN1ENSG00000171603.12chr1-9797555979761297959429796100980115198013140.216000.000000.00000includedHepG2GRWD1
    SEGKENSG00000198814.8chrX+3071584830715866307147333071480030718530307185660.073000.000010.01426includedHepG2GRWD1
    SECITENSG00000122966.9chr12-1201488531201488981201483441201484251201499821201501520.574000.000040.05657includedHepG2GRWD1
    SELUC7L3ENSG00000108848.11chr17+488146474881484048814320488143874881766648817706-0.160000.000010.01426excludedHepG2GRWD1
    SESEC31AENSG00000138674.12chr4-837520898375212883750152837502118376329283763634-0.259000.000010.02522excludedHepG2GRWD1
    SEAHSA2ENSG00000173209.18chr2+614131146141321661412636614127536141358061413632-0.174000.000010.02479excludedHepG2GRWD1
    SECOX7BENSG00000131174.4chrX+771581467715826477154934771550907716068077160772-0.059000.000000.00259excludedHepG2GRWD1
    SEENAHENSG00000154380.12chr1-225692692225692755225688693225688772225695652225695719-0.311000.000000.00007excludedHepG2GRWD1
    SERPS18ENSG00000231500.2chr6+332435873324366033240363332405033324374133244287-0.090000.000000.00000excludedHepG2GRWD1
    SEDHRS2ENSG00000100867.10chr14+241080062410821324105575241059812410838724108565-0.083000.000070.09121excludedHepG2GRWD1
    SEAFMIDENSG00000183077.11chr17+762007367620082276198783761988327620090876200981-0.328000.000000.00007excludedHepG2GRWD1
    SEKIAA1217ENSG00000120549.11chr10+247834282478353324762156247629892478407524784125-0.243000.000080.09747excludedHepG2GRWD1
    RINDUFV1ENSG00000167792.7chr11+6737785167378678673778516737804167378465673786780.096000.000040.06794includedHepG2GRWD1
    RIAHSA2ENSG00000173209.18chr2+614126366141363261412636614127536141358061413632-0.175000.000020.05713excludedHepG2GRWD1





    1 RBPs can affect the splicing of GRWD1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    A3SSGRWD1ENSG00000105447.8chr19+4895388748954065489539224895406548953569489537830.085000.000000.00000longerK562AQR
    A3SSGRWD1ENSG00000105447.8chr19+4895427448954488489542904895448848953887489540650.091000.000000.00000longerK562AQR

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    No autoregularoty alternative splicing events between protein GRWD1 and its RNA.