CIT

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CIT	ENSG00000122966.15	8.65	10.07	9.36	ENCSR000AEF
HepG2	CIT	ENSG00000122966.15	11.69	11.07	11.38	ENCSR985KAT
K562	CIT	ENSG00000122966.15	12.87	14.35	13.61	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CIT is not avaliable on ENCORE database.

Proteins bound to RNA

CIT RNA is bound by 24 proteins.

eCLIP assay for CIT is not avaliable on ENCORE database.

24 proteins are bound to CIT RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	120123963	120124061	-	3'-UTR,intron-Distal	4.33483	18.62108	K562	PUM2
chr12	120125225	120125309	-	3'-UTR,intron-Distal	3.29781	4.30970	K562	IGF2BP2
chr12	120124169	120124293	-	3'-UTR,intron-Distal	3.19943	9.62434	K562	UPF1
chr12	120124092	120124169	-	3'-UTR,intron-Distal	4.33211	16.16162	K562	UPF1
chr12	120270579	120270662	-	CDS,intron-Distal	4.56854	6.50203	HepG2	GRWD1
chr12	120260545	120260656	-	CDS,intron-Distal,intron-Proximal	3.40341	8.60356	K562	PRPF8
chr12	120195212	120195311	-	CDS,intron-Distal	4.79703	6.92104	HepG2	GRWD1
chr12	120208589	120208657	-	CDS,intron-Distal	3.38202	7.30210	K562	ZNF622
chr12	120313875	120313941	-	CDS,intron-Distal,intron-Proximal	3.81373	3.59112	HepG2	PPIG
chr12	120208658	120208715	-	CDS,intron-Distal,intron-Proximal	3.79021	9.97367	K562	UCHL5
chr12	120151035	120151051	-	CDS,intron-Distal	3.48340	3.90826	K562	ZNF622
chr12	120214517	120214563	-	CDS,intron-Distal	3.51515	6.73967	K562	ZNF622
chr12	120168307	120168388	-	CDS,intron-Distal	4.13335	3.43975	HepG2	LIN28B
chr12	120150489	120150572	-	CDS,intron-Distal,intron-Proximal	4.04086	3.41738	HepG2	PTBP1
chr12	120262930	120262976	-	CDS,intron-Distal,intron-Proximal	4.33787	4.21433	K562	PRPF8
chr12	120148106	120148124	-	CDS,intron-Distal	3.43684	3.66187	K562	ZNF622
chr12	120148055	120148086	-	CDS,intron-Distal,intron-Proximal	3.17689	3.05161	HepG2	PPIG
chr12	120150151	120150236	-	CDS,intron-Distal,intron-Proximal	4.28251	4.28193	HepG2	AQR
chr12	120220341	120220392	-	CDS,intron-Distal	3.41400	4.41873	K562	ZNF800
chr12	120271986	120272030	-	CDS,intron-Distal	3.35709	7.21479	K562	UCHL5
chr12	120148055	120148107	-	CDS,intron-Distal,intron-Proximal	3.70980	5.77496	K562	DDX24
chr12	120271989	120272027	-	CDS,intron-Distal	4.23110	7.93948	K562	ZNF622
chr12	120146041	120146077	-	CDS,intron-Distal	3.36180	3.11409	K562	DDX24
chr12	120287977	120288065	-	CDS,intron-Distal,intron-Proximal	4.56494	17.30887	K562	DDX24
chr12	120241070	120241121	-	CDS,intron-Distal	3.31087	6.54511	K562	UCHL5
chr12	120213605	120213642	-	CDS,intron-Distal	5.13602	4.17466	K562	DDX24
chr12	120313837	120313921	-	CDS,intron-Distal,intron-Proximal	5.14671	5.68502	HepG2	PRPF8
chr12	120146086	120146104	-	CDS,intron-Distal	3.59067	5.76403	K562	UCHL5
chr12	120195211	120195302	-	CDS,intron-Distal	3.99816	14.35403	K562	UCHL5
chr12	120204924	120204984	-	CDS,intron-Distal	5.86236	14.39302	K562	UCHL5
chr12	120195173	120195211	-	CDS,intron-Distal,intron-Proximal	4.62297	10.62510	K562	UCHL5
chr12	120195172	120195194	-	CDS,intron-Distal,intron-Proximal	3.08951	6.64373	K562	ZNF800
chr12	120208591	120208640	-	CDS,intron-Distal	3.34132	4.27864	K562	DDX24
chr12	120221816	120221856	-	CDS,intron-Distal,intron-Proximal	3.15057	7.92361	K562	ZNF622
chr12	120214500	120214606	-	CDS,intron-Distal	3.40995	15.08592	K562	UCHL5
chr12	120241070	120241117	-	CDS,intron-Distal	3.39906	4.76953	K562	DDX24
chr12	120189992	120190053	-	CDS,intron-Distal,intron-Proximal	4.43056	4.04372	HepG2	BCLAF1
chr12	120270588	120270667	-	CDS,intron-Distal	3.42810	10.33341	K562	UCHL5
chr12	120208686	120208714	-	CDS,intron-Distal	3.98839	5.47804	K562	ZNF622
chr12	120151037	120151085	-	CDS,intron-Distal	4.99685	7.33003	K562	UCHL5
chr12	120168305	120168366	-	CDS,intron-Distal	4.76768	9.46646	K562	LIN28B
chr12	120146047	120146085	-	CDS,intron-Distal	3.09781	5.75243	K562	ZNF622
chr12	120214502	120214622	-	CDS,intron-Distal	3.08885	4.71502	HepG2	GRWD1
chr12	120313885	120313937	-	CDS,intron-Distal	3.72391	7.52358	K562	UCHL5
chr12	120146093	120146124	-	CDS,intron-Distal,intron-Proximal	3.47470	3.59112	HepG2	PPIG
chr12	120142167	120142223	-	CDS,intron-Distal,intron-Proximal	3.97837	8.54758	K562	ZNF622
chr12	120221809	120221856	-	CDS,intron-Distal,intron-Proximal	3.65904	8.91541	K562	UCHL5
chr12	120148344	120148362	-	CDS,intron-Distal,intron-Proximal	3.52240	3.95301	K562	ZNF622
chr12	120214161	120214188	-	CDS,intron-Distal,intron-Proximal	3.18488	7.01182	K562	ZNF622
chr12	120221734	120221809	-	CDS,intron-Distal	5.11736	16.68518	K562	UCHL5
chr12	120150404	120150493	-	CDS,intron-Distal	3.08671	7.74050	K562	UCHL5
chr12	120241009	120241033	-	CDS,intron-Distal,intron-Proximal	3.66022	3.95301	K562	ZNF622
chr12	120214162	120214207	-	CDS,intron-Distal	3.98215	3.34184	HepG2	GRWD1
chr12	120198752	120198768	-	CDS,intron-Distal	3.78522	4.49347	K562	UCHL5
chr12	120287996	120288050	-	CDS,intron-Distal	3.75578	11.50311	K562	UCHL5
chr12	120213615	120213643	-	CDS,intron-Distal	3.91676	3.45225	K562	GRWD1
chr12	120214563	120214604	-	CDS,intron-Distal	4.39984	7.60776	K562	ZNF622
chr12	120148403	120148466	-	CDS,intron-Distal,intron-Proximal	3.47852	8.38394	K562	AQR
chr12	120195173	120195203	-	CDS,intron-Distal,intron-Proximal	3.32243	7.86771	K562	ZNF622
chr12	120171978	120172048	-	CDS,intron-Distal	3.44301	8.15127	K562	ZNF622
chr12	120190009	120190053	-	CDS,intron-Distal,intron-Proximal	3.07595	8.15779	K562	ZNF800
chr12	120221734	120221836	-	CDS,intron-Distal	4.82509	5.82083	HepG2	GRWD1
chr12	120148172	120148190	-	CDS,intron-Distal	3.67381	3.66187	K562	ZNF622
chr12	120214561	120214627	-	CDS,intron-Distal	4.00103	6.26935	K562	DDX24
chr12	120146038	120146098	-	CDS,intron-Distal	4.09354	4.34615	K562	LIN28B
chr12	120210573	120210584	-	CDS,intron-Distal,intron-Proximal	3.92063	6.14226	K562	ZNF622
chr12	120208590	120208658	-	CDS,intron-Distal	5.11214	14.36289	K562	UCHL5
chr12	120152045	120152090	-	CDS,intron-Distal	3.44297	5.17903	K562	UCHL5
chr12	120221755	120221816	-	CDS,intron-Distal	4.49170	13.05811	K562	ZNF622
chr12	120241077	120241129	-	CDS,intron-Distal	3.34962	6.97987	K562	ZNF622
chr12	120146055	120146086	-	CDS,intron-Distal	3.51484	5.91739	K562	UCHL5
chr12	120190018	120190053	-	CDS,intron-Distal,intron-Proximal	3.49417	5.97026	K562	PUM1
chr12	120260620	120260658	-	CDS,intron-Distal,intron-Proximal	3.93656	3.51664	K562	RBM15
chr12	120146103	120146124	-	CDS,intron-Distal,intron-Proximal	3.67280	7.99428	K562	DDX24
chr12	120213604	120213643	-	CDS,intron-Distal	5.14636	5.78736	K562	ZNF622
chr12	120272005	120272032	-	CDS,intron-Distal	5.30800	5.93845	K562	DDX24
chr12	120210573	120210603	-	CDS,intron-Distal,intron-Proximal	3.05298	6.35635	K562	UCHL5
chr12	120260735	120260769	-	CDS,intron-Distal	3.50371	4.51027	K562	BUD13
chr12	120171968	120172021	-	CDS,intron-Distal,intron-Proximal	4.04613	9.17402	K562	UCHL5
chr12	120196430	120196503	-	CDS,intron-Distal	4.00230	7.79255	K562	UCHL5
chr12	120172026	120172091	-	CDS,intron-Distal	3.31768	3.04935	K562	ZNF800
chr12	120168362	120168432	-	CDS,intron-Distal	4.01839	9.87150	K562	UCHL5
chr12	120270578	120270624	-	CDS,intron-Distal	3.23747	6.46814	K562	ZNF622
chr12	120195174	120195212	-	CDS,intron-Distal,intron-Proximal	3.34656	4.65365	HepG2	GRWD1
chr12	120139437	120139486	-	CDS,intron-Distal	5.40021	5.34688	K562	DDX24
chr12	120172040	120172093	-	CDS,intron-Distal	3.75195	6.43326	K562	UCHL5
chr12	120189978	120190038	-	CDS,intron-Distal,intron-Proximal	4.19086	15.49760	K562	UCHL5
chr12	120139732	120139762	-	CDS,intron-Distal	3.50424	5.65306	K562	ZNF622
chr12	120288010	120288091	-	CDS,intron-Distal,intron-Proximal	3.86259	11.02062	K562	U2AF2
chr12	120172093	120172149	-	CDS,intron-Distal	3.76463	7.79255	K562	UCHL5
chr12	120195173	120195228	-	CDS,intron-Distal,intron-Proximal	4.03647	13.03959	K562	PUM1
chr12	120287980	120288075	-	CDS,intron-Distal	3.41180	4.89942	HepG2	GRWD1
chr12	120306866	120306956	-	CDS,intron-Distal	3.14292	5.10129	K562	DDX24
chr12	120221722	120221796	-	CDS,intron-Distal	4.16530	3.45943	HepG2	BCLAF1
chr12	120189994	120190053	-	CDS,intron-Distal,intron-Proximal	3.64547	12.74321	K562	ZNF622
chr12	120190038	120190052	-	CDS,intron-Distal	4.33307	8.07592	K562	UCHL5
chr12	120168369	120168437	-	CDS,intron-Distal,intron-Proximal	5.43579	9.39567	K562	LIN28B
chr12	120195203	120195281	-	CDS,intron-Distal	4.00832	11.69958	K562	ZNF622
chr12	120266750	120266849	-	intron-Distal	3.82874	10.96533	K562	PTBP1
chr12	120148808	120148853	-	intron-Distal,intron-Proximal	5.33115	5.69951	K562	AQR
chr12	120150537	120150590	-	intron-Distal,intron-Proximal	4.26157	6.12189	K562	PTBP1
chr12	120294319	120294405	-	intron-Distal	3.72864	3.08314	K562	TARDBP
chr12	120267127	120267171	-	intron-Distal	4.51957	3.55787	K562	PTBP1
chr12	120270827	120270927	-	intron-Distal	5.50170	8.42544	K562	PTBP1
chr12	120288136	120288163	-	intron-Distal,intron-Proximal	4.15961	4.05367	K562	ILF3
chr12	120142121	120142168	-	intron-Distal,intron-Proximal	4.49660	7.53589	K562	AQR
chr12	120149893	120149979	-	intron-Distal,intron-Proximal	3.60091	8.33653	K562	PRPF8
chr12	120150917	120150999	-	intron-Distal,intron-Proximal	4.51399	15.03023	K562	PRPF8
chr12	120290604	120290667	-	intron-Distal	3.86414	3.59673	K562	HNRNPL
chr12	120289027	120289127	-	intron-Distal	3.94397	13.60864	K562	HNRNPL
chr12	120288196	120288294	-	intron-Distal	4.37026	4.58544	K562	ILF3
chr12	120157314	120157409	-	intron-Distal	3.88126	3.92684	K562	KHSRP
chr12	120214063	120214142	-	intron-Distal,intron-Proximal	5.43262	8.34710	K562	AQR
chr12	120134885	120134990	-	intron-Distal	3.99864	4.05367	K562	ILF3
chr12	120263392	120263515	-	intron-Distal	3.77506	3.24603	K562	KHSRP
chr12	120150941	120151007	-	intron-Distal,intron-Proximal	7.15518	30.67861	K562	AQR
chr12	120280863	120281014	-	intron-Distal	4.31206	5.16181	K562	PTBP1
chr12	120205483	120205580	-	intron-Distal	3.99001	3.37631	K562	HNRNPL
chr12	120288203	120288322	-	intron-Distal	3.89055	7.08952	K562	PCBP1
chr12	120150353	120150394	-	intron-Distal,intron-Proximal	4.60073	8.01338	K562	AQR
chr12	120266721	120266848	-	intron-Distal	4.32232	4.40847	HepG2	PTBP1
chr12	120288163	120288183	-	intron-Distal,intron-Proximal	3.99864	3.33062	K562	ILF3
chr12	120150621	120150680	-	intron-Distal	5.98151	11.02807	K562	AQR
chr12	120144929	120145006	-	intron-Distal	4.31646	4.92524	K562	TARDBP
chr12	120280859	120281017	-	intron-Distal	4.07803	6.99720	K562	MATR3
chr12	120149902	120149932	-	intron-Distal,intron-Proximal	4.74336	4.65563	K562	AQR
chr12	120149932	120149982	-	intron-Distal,intron-Proximal	5.10459	11.82040	K562	AQR
chr12	120148766	120148879	-	intron-Distal,intron-Proximal	3.26720	5.83656	K562	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CIT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CIT is not available on ENCORE database.
166 RBPs can affect the levels of CIT.

The Knockdown/knockout RNA-Seq assay for CIT is not available on ENCORE database.

166 RBPs can affect the gene expression of CIT :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CIT	ENSG00000122966.9	502.71990	722.56370	-0.52340	4.21110	2.91710	HepG2	AATF
CIT	ENSG00000122966.9	1133.50820	1441.37170	-0.34660	2.19560	1.35250	HepG2	ABCF1
CIT	ENSG00000122966.9	600.02230	989.14350	-0.72120	13.84640	12.70580	HepG2	ACO1
CIT	ENSG00000122966.9	211.19830	516.01930	-1.28880	11.93190	10.90270	HepG2	AKAP1
CIT	ENSG00000122966.9	251.17340	549.81900	-1.13030	11.53030	9.57910	HepG2	AKAP8
CIT	ENSG00000122966.9	680.70340	993.75030	-0.54590	7.92820	6.71160	HepG2	AKAP8L
CIT	ENSG00000122966.9	71.02130	426.97700	-2.58780	36.10200	33.77830	HepG2	ASCC1
CIT	ENSG00000122966.9	810.03580	1300.79170	-0.68330	8.14710	5.89000	HepG2	ATP5C1
CIT	ENSG00000122966.9	678.70820	1372.77220	-1.01620	27.14140	25.38770	HepG2	AUH
CIT	ENSG00000122966.9	435.54030	747.87340	-0.78000	6.59070	5.11010	HepG2	BCCIP
CIT	ENSG00000122966.9	231.08610	649.80640	-1.49160	19.67700	17.62380	HepG2	BCLAF1
CIT	ENSG00000122966.9	49.91780	1057.35700	-4.40480	138.15340	135.49710	HepG2	BOP1
CIT	ENSG00000122966.9	310.00320	1098.98380	-1.82580	49.85710	47.43120	HepG2	CALR
CIT	ENSG00000122966.9	246.92280	405.65290	-0.71620	4.66580	3.67570	HepG2	CIRBP
CIT	ENSG00000122966.9	207.54980	988.87990	-2.25230	92.42660	89.95000	HepG2	CKAP4
CIT	ENSG00000122966.9	155.07220	562.82600	-1.85970	3.70570	2.81480	HepG2	CNOT7
CIT	ENSG00000122966.9	480.11300	970.70030	-1.01570	13.72600	12.33150	HepG2	CPSF6
CIT	ENSG00000122966.9	869.86920	1187.06630	-0.44850	4.10950	2.77490	HepG2	CPSF7
CIT	ENSG00000122966.9	624.28280	865.47600	-0.47130	5.12910	3.74180	HepG2	YBX3
CIT	ENSG00000122966.9	694.38970	1166.82650	-0.74880	13.54090	12.32920	HepG2	CELF1
CIT	ENSG00000122966.9	664.07730	1254.52810	-0.91770	21.24930	19.55050	HepG2	DAZAP1
CIT	ENSG00000122966.9	717.57270	914.79370	-0.35030	4.14440	3.14720	HepG2	DDX19B
CIT	ENSG00000122966.9	269.70150	796.91680	-1.56310	29.18930	27.33500	HepG2	DDX21
CIT	ENSG00000122966.9	408.06360	780.08490	-0.93480	13.00550	11.08750	HepG2	DDX24
CIT	ENSG00000122966.9	493.70630	687.97900	-0.47870	2.76550	1.47550	HepG2	DDX27
CIT	ENSG00000122966.9	370.58160	556.97960	-0.58780	3.60010	2.00830	HepG2	DDX28
CIT	ENSG00000122966.9	68.62840	494.33830	-2.84860	45.45050	43.20220	HepG2	DDX3X
CIT	ENSG00000122966.9	282.18380	735.33420	-1.38180	17.29780	15.60370	HepG2	DDX55
CIT	ENSG00000122966.9	497.93710	1102.30510	-1.14650	9.11160	7.40420	HepG2	DDX59
CIT	ENSG00000122966.9	706.91680	1207.05160	-0.77190	9.72200	7.97090	HepG2	DDX5
CIT	ENSG00000122966.9	111.28050	424.57410	-1.93180	21.29410	19.79490	HepG2	DDX6
CIT	ENSG00000122966.9	590.88940	819.63420	-0.47210	3.90040	2.74630	HepG2	DHX30
CIT	ENSG00000122966.9	559.38280	946.32970	-0.75850	10.03330	8.90480	HepG2	DKC1
CIT	ENSG00000122966.9	468.19820	849.78670	-0.86000	14.22050	12.72280	HepG2	DNAJC21
CIT	ENSG00000122966.9	529.91870	842.34940	-0.66860	11.70330	10.46280	HepG2	DNAJC2
CIT	ENSG00000122966.9	663.43410	899.63510	-0.43940	3.09160	2.12040	HepG2	EEF2
CIT	ENSG00000122966.9	388.83520	749.89490	-0.94750	11.10540	8.92000	HepG2	EFTUD2
CIT	ENSG00000122966.9	270.48540	734.04650	-1.44030	17.65500	15.14270	HepG2	AGO1
CIT	ENSG00000122966.9	47.00130	408.22560	-3.11860	43.04910	40.94370	HepG2	EIF2S1
CIT	ENSG00000122966.9	233.05760	730.25160	-1.64770	25.00850	22.59950	HepG2	EIF3D
CIT	ENSG00000122966.9	559.14080	752.71960	-0.42890	3.26300	2.09970	HepG2	EIF3G
CIT	ENSG00000122966.9	290.23740	451.17220	-0.63640	3.81510	3.06960	HepG2	EIF4A3
CIT	ENSG00000122966.9	553.82720	1237.75240	-1.16020	31.21880	29.06740	HepG2	EIF4G1
CIT	ENSG00000122966.9	626.73910	1185.67260	-0.91980	12.94720	11.27430	HepG2	EIF4G2
CIT	ENSG00000122966.9	557.37070	1576.11760	-1.49970	56.40380	54.34220	HepG2	ETF1
CIT	ENSG00000122966.9	493.86210	966.52680	-0.96870	15.49610	13.61070	HepG2	EWSR1
CIT	ENSG00000122966.9	380.99200	759.55960	-0.99540	13.89870	11.69750	HepG2	FASTKD2
CIT	ENSG00000122966.9	1102.35960	1455.45240	-0.40090	2.50730	1.77070	HepG2	FIP1L1
CIT	ENSG00000122966.9	406.65280	612.03250	-0.58980	4.19450	2.65690	HepG2	FKBP4
CIT	ENSG00000122966.9	366.43980	972.38700	-1.40800	8.70980	6.92670	HepG2	FTO
CIT	ENSG00000122966.9	493.53950	346.93780	0.50840	3.45840	2.58240	HepG2	FUBP3
CIT	ENSG00000122966.9	1102.72100	455.10820	1.27670	20.09640	18.40920	HepG2	FXR1
CIT	ENSG00000122966.9	592.71830	448.18410	0.40320	2.26110	1.45950	HepG2	G3BP2
CIT	ENSG00000122966.9	417.51470	650.17940	-0.63900	5.18960	3.95940	HepG2	GEMIN5
CIT	ENSG00000122966.9	376.52410	1100.33420	-1.54710	25.71340	23.98430	HepG2	GPKOW
CIT	ENSG00000122966.9	664.01410	944.31940	-0.50810	7.20570	5.71970	HepG2	HDGF
CIT	ENSG00000122966.9	508.36860	847.90370	-0.73800	3.93100	2.25820	HepG2	HLTF
CIT	ENSG00000122966.9	371.17880	857.92860	-1.20870	19.05640	17.60950	HepG2	HNRNPA1
CIT	ENSG00000122966.9	559.17480	1152.99400	-1.04400	24.66010	22.46400	HepG2	HNRNPA2B1
CIT	ENSG00000122966.9	404.81310	954.30910	-1.23720	20.26200	18.56060	HepG2	HNRNPC
CIT	ENSG00000122966.9	651.64790	1142.74970	-0.81030	18.81450	17.20590	HepG2	HNRNPL
CIT	ENSG00000122966.9	318.42170	1050.07190	-1.72150	33.29910	31.49710	HepG2	HNRNPLL
CIT	ENSG00000122966.9	656.20760	1004.23530	-0.61390	7.01190	5.60000	HepG2	HNRNPM
CIT	ENSG00000122966.9	752.37440	947.99820	-0.33340	3.54570	2.86780	HepG2	HNRNPU
CIT	ENSG00000122966.9	376.94540	598.73300	-0.66760	4.33740	2.78930	HepG2	HSPD1
CIT	ENSG00000122966.9	589.71020	737.09190	-0.32180	2.06530	1.43360	HepG2	IGF2BP1
CIT	ENSG00000122966.9	75.27500	429.21260	-2.51140	34.98510	32.89960	HepG2	IGF2BP2
CIT	ENSG00000122966.9	662.87340	968.34490	-0.54680	9.62010	8.33610	HepG2	ILF2
CIT	ENSG00000122966.9	562.75960	783.08490	-0.47660	3.66910	1.80250	HepG2	CCAR2
CIT	ENSG00000122966.9	664.59580	1766.04160	-1.41000	16.32550	14.34400	HepG2	LARP4
CIT	ENSG00000122966.9	577.07880	866.71500	-0.58680	5.52230	3.92940	HepG2	LARP7
CIT	ENSG00000122966.9	611.76040	910.09870	-0.57310	5.20580	3.53680	HepG2	LIN28B
CIT	ENSG00000122966.9	385.72970	764.23770	-0.98640	7.23470	5.62140	HepG2	METAP2
CIT	ENSG00000122966.9	665.47970	1178.00460	-0.82390	12.35080	10.76630	HepG2	MSI2
CIT	ENSG00000122966.9	712.92280	989.16130	-0.47250	4.19720	2.70190	HepG2	NAA15
CIT	ENSG00000122966.9	549.53820	783.69400	-0.51210	4.16120	2.40760	HepG2	NIP7
CIT	ENSG00000122966.9	975.79230	1243.99270	-0.35030	3.33900	2.50290	HepG2	NOL12
CIT	ENSG00000122966.9	639.63090	931.11150	-0.54170	4.61890	3.65950	HepG2	NSUN2
CIT	ENSG00000122966.9	293.62580	531.18980	-0.85520	4.79070	2.71160	HepG2	NUP35
CIT	ENSG00000122966.9	198.39100	417.41000	-1.07310	9.12580	7.83360	HepG2	PABPC4
CIT	ENSG00000122966.9	692.11510	938.32820	-0.43910	5.15230	4.04420	HepG2	PARN
CIT	ENSG00000122966.9	210.82040	836.52630	-1.98840	27.74760	24.89290	HepG2	PCBP2
CIT	ENSG00000122966.9	568.21790	831.68060	-0.54960	3.40920	1.55020	HepG2	PHF6
CIT	ENSG00000122966.9	372.96420	581.45900	-0.64060	4.24100	2.01580	HepG2	PPIG
CIT	ENSG00000122966.9	774.66930	1176.89500	-0.60330	7.38190	6.19060	HepG2	PRPF4
CIT	ENSG00000122966.9	120.54450	567.14810	-2.23420	35.54350	33.19760	HepG2	PRPF8
CIT	ENSG00000122966.9	249.43330	1187.52670	-2.25120	65.57730	63.16760	HepG2	PUF60
CIT	ENSG00000122966.9	771.30460	1260.64340	-0.70880	16.79830	15.59270	HepG2	PUM1
CIT	ENSG00000122966.9	738.81250	1259.70310	-0.76980	12.44380	11.08260	HepG2	PUM2
CIT	ENSG00000122966.9	714.80630	1007.49970	-0.49520	7.26650	6.34730	HepG2	PUS1
CIT	ENSG00000122966.9	293.08310	807.05760	-1.46140	12.67210	11.25900	HepG2	RAVER1
CIT	ENSG00000122966.9	862.07910	1471.29410	-0.77120	13.78350	12.09790	HepG2	RBM15
CIT	ENSG00000122966.9	196.11090	1317.34450	-2.74790	113.73440	111.41880	HepG2	RBM22
CIT	ENSG00000122966.9	302.15550	452.74070	-0.58340	4.20830	3.39190	HepG2	RBM25
CIT	ENSG00000122966.9	605.19420	1045.11060	-0.78820	8.69770	6.93370	HepG2	RBM27
CIT	ENSG00000122966.9	598.79430	848.67530	-0.50320	3.04740	1.93410	HepG2	RCC2
CIT	ENSG00000122966.9	1018.67380	512.61470	0.99060	19.87950	18.68620	HepG2	NELFE
CIT	ENSG00000122966.9	1046.32630	477.42920	1.13190	26.78990	25.22210	HepG2	RECQL
CIT	ENSG00000122966.9	92.70500	806.55960	-3.12110	39.32620	37.45000	HepG2	RPLP0
CIT	ENSG00000122966.9	217.33180	793.15940	-1.86770	23.58020	21.09840	HepG2	RPS10
CIT	ENSG00000122966.9	124.27750	710.62010	-2.51550	60.71860	58.52350	HepG2	RPS19
CIT	ENSG00000122966.9	300.55330	963.88130	-1.68120	32.56070	30.05560	HepG2	RPS2
CIT	ENSG00000122966.9	99.55730	566.03950	-2.50730	4.89370	3.82690	HepG2	RPS3A
CIT	ENSG00000122966.9	765.39690	983.90030	-0.36230	2.38090	1.38930	HepG2	RPS5
CIT	ENSG00000122966.9	83.97170	561.01680	-2.74010	44.16970	41.80830	HepG2	RRP9
CIT	ENSG00000122966.9	388.56500	713.13390	-0.87600	9.15280	7.46800	HepG2	SERBP1
CIT	ENSG00000122966.9	449.13380	1053.39580	-1.22980	13.28700	11.74380	HepG2	SF3A3
CIT	ENSG00000122966.9	365.03890	1039.34630	-1.50960	29.36120	27.33920	HepG2	SF3B1
CIT	ENSG00000122966.9	369.70870	479.55560	-0.37530	2.48490	1.91980	HepG2	SF3B4
CIT	ENSG00000122966.9	911.33050	1138.71740	-0.32140	3.67450	2.88510	HepG2	SLBP
CIT	ENSG00000122966.9	534.48520	984.48270	-0.88120	20.97480	19.45450	HepG2	SMN1
CIT	ENSG00000122966.9	457.83780	824.01820	-0.84780	6.77650	5.22280	HepG2	SMNDC1
CIT	ENSG00000122966.9	377.69390	1156.46130	-1.61440	19.59480	17.57650	HepG2	SNRNP70
CIT	ENSG00000122966.9	226.06700	1487.89520	-2.71850	147.78350	145.56240	HepG2	SRFBP1
CIT	ENSG00000122966.9	1074.87920	500.55140	1.10250	26.33640	25.20220	HepG2	SRSF1
CIT	ENSG00000122966.9	706.13090	1172.54720	-0.73160	13.91200	12.65790	HepG2	SRSF5
CIT	ENSG00000122966.9	421.74630	735.46650	-0.80230	7.50850	6.45250	HepG2	SRSF7
CIT	ENSG00000122966.9	248.92390	407.22450	-0.71010	6.92730	6.12540	HepG2	SRSF9
CIT	ENSG00000122966.9	634.46480	1291.85080	-1.02580	28.39630	27.14140	HepG2	SSB
CIT	ENSG00000122966.9	554.01380	972.19740	-0.81130	7.02660	5.16690	HepG2	STAU1
CIT	ENSG00000122966.9	453.57760	754.27180	-0.73370	4.35060	2.83200	HepG2	SUB1
CIT	ENSG00000122966.9	1110.13270	1333.47700	-0.26450	2.16560	1.60280	HepG2	SUCLG1
CIT	ENSG00000122966.9	299.53200	603.93300	-1.01170	8.51270	6.23110	HepG2	SUGP2
CIT	ENSG00000122966.9	524.73540	982.83980	-0.90540	13.45640	11.50010	HepG2	SUPT6H
CIT	ENSG00000122966.9	85.45300	731.98400	-3.09860	64.22240	61.90260	HepG2	SUPV3L1
CIT	ENSG00000122966.9	996.86290	449.91280	1.14760	25.12790	23.66790	HepG2	TAF15
CIT	ENSG00000122966.9	289.79760	1023.57510	-1.82050	39.11280	36.99170	HepG2	TARDBP
CIT	ENSG00000122966.9	116.23460	490.60510	-2.07750	28.52640	26.11640	HepG2	TFIP11
CIT	ENSG00000122966.9	594.00690	413.41100	0.52280	4.37660	3.33370	HepG2	TIA1
CIT	ENSG00000122966.9	140.64580	921.07440	-2.71130	84.99700	82.94960	HepG2	TIAL1
CIT	ENSG00000122966.9	409.49660	929.39720	-1.18240	29.93100	28.31810	HepG2	TRIM56
CIT	ENSG00000122966.9	496.76150	1245.07720	-1.32560	24.47080	22.54120	HepG2	U2AF1
CIT	ENSG00000122966.9	319.97120	1299.55410	-2.02200	10.18290	8.17590	HepG2	U2AF2
CIT	ENSG00000122966.9	155.57390	432.38510	-1.47470	17.12720	15.27230	HepG2	UCHL5
CIT	ENSG00000122966.9	248.35100	934.20500	-1.91140	34.43250	32.53990	HepG2	UPF1
CIT	ENSG00000122966.9	389.26980	670.19470	-0.78380	5.55460	4.09820	HepG2	UPF2
CIT	ENSG00000122966.9	482.00820	960.20170	-0.99430	11.62470	9.67710	HepG2	UTP18
CIT	ENSG00000122966.9	453.13360	901.93200	-0.99310	14.95500	13.72930	HepG2	UTP3
CIT	ENSG00000122966.9	554.37830	887.75400	-0.67930	4.63100	3.27650	HepG2	XRCC6
CIT	ENSG00000122966.9	565.14140	720.55890	-0.35050	2.02270	1.39430	HepG2	XRN2
CIT	ENSG00000122966.9	773.42540	1161.44090	-0.58660	10.99450	9.80620	HepG2	ZC3H8
CIT	ENSG00000122966.9	81.44570	1027.44100	-3.65710	76.16320	74.32410	HepG2	ZNF622
CIT	ENSG00000122966.9	4287.24320	3516.02230	0.28600	5.06770	4.33860	K562	AGGF1
CIT	ENSG00000122966.9	1836.48580	1571.99450	0.22430	2.51370	1.60140	K562	BCLAF1
CIT	ENSG00000122966.9	1685.09590	1262.33260	0.41660	3.69150	2.43720	K562	CCAR1
CIT	ENSG00000122966.9	3025.02100	4201.80110	-0.47410	7.52780	5.57790	K562	CCDC124
CIT	ENSG00000122966.9	2779.74120	2270.08610	0.29210	3.10600	1.49870	K562	CEBPZ
CIT	ENSG00000122966.9	2460.02840	2054.40660	0.25990	2.38310	1.65030	K562	CPSF6
CIT	ENSG00000122966.9	1433.00630	1192.59190	0.26480	2.27750	1.33770	K562	CSTF2
CIT	ENSG00000122966.9	5949.83200	4334.85570	0.45680	6.95220	5.42420	K562	CELF1
CIT	ENSG00000122966.9	3575.95520	2609.17450	0.45460	9.37020	7.12950	K562	DDX21
CIT	ENSG00000122966.9	2044.72240	3328.79300	-0.70310	8.52970	7.46610	K562	DDX47
CIT	ENSG00000122966.9	3246.84680	3936.83340	-0.27800	3.60260	2.58600	K562	DKC1
CIT	ENSG00000122966.9	1151.73760	1624.31720	-0.49600	4.98600	3.74380	K562	EFTUD2
CIT	ENSG00000122966.9	1104.60490	1738.89570	-0.65460	6.41490	4.74330	K562	EIF3D
CIT	ENSG00000122966.9	1064.62250	1340.78900	-0.33270	2.51660	1.75760	K562	EIF3G
CIT	ENSG00000122966.9	1439.53250	2132.53880	-0.56700	7.28120	5.95450	K562	EIF4A3
CIT	ENSG00000122966.9	2327.95700	1920.50420	0.27750	3.10500	1.86280	K562	EIF4B
CIT	ENSG00000122966.9	2260.62250	1861.51380	0.28010	2.89550	1.57210	K562	EWSR1
CIT	ENSG00000122966.9	1217.86640	2217.75730	-0.86470	24.24120	22.56950	K562	FXR1
CIT	ENSG00000122966.9	2618.58220	2069.43270	0.33950	3.35700	1.74610	K562	G3BP1
CIT	ENSG00000122966.9	3203.31210	2454.36260	0.38410	5.99310	4.35180	K562	GLRX3
CIT	ENSG00000122966.9	1720.51460	2321.78870	-0.43240	5.17850	4.14000	K562	GRSF1
CIT	ENSG00000122966.9	1488.29930	1791.81410	-0.26780	2.13900	1.60570	K562	HNRNPC
CIT	ENSG00000122966.9	2062.93600	1600.17600	0.36640	3.66110	2.33010	K562	HNRNPF
CIT	ENSG00000122966.9	1539.26140	2161.59090	-0.48990	4.74880	3.09310	K562	HNRNPK
CIT	ENSG00000122966.9	964.54730	1638.03370	-0.76400	8.78240	6.95550	K562	HNRNPM
CIT	ENSG00000122966.9	2070.16400	2700.15730	-0.38330	3.66680	2.75530	K562	HSPD1
CIT	ENSG00000122966.9	1552.04530	2274.81020	-0.55160	7.80640	6.36810	K562	MAGOH
CIT	ENSG00000122966.9	1861.34190	2270.07090	-0.28640	2.65570	1.75300	K562	MATR3
CIT	ENSG00000122966.9	2399.67370	1914.54540	0.32570	3.20180	2.25560	K562	METAP2
CIT	ENSG00000122966.9	3069.51610	2580.45400	0.25030	3.63980	2.72220	K562	MTPAP
CIT	ENSG00000122966.9	3760.02200	2867.04960	0.39110	12.47850	11.05320	K562	NSUN2
CIT	ENSG00000122966.9	2724.31880	2224.00630	0.29260	2.93420	1.54550	K562	PCBP1
CIT	ENSG00000122966.9	1468.26450	2023.86840	-0.46300	5.19580	3.84240	K562	PCBP2
CIT	ENSG00000122966.9	3756.81620	3027.45950	0.31130	2.27100	1.51780	K562	PCBP3
CIT	ENSG00000122966.9	1829.73620	2260.73940	-0.30520	2.34860	1.59430	K562	PPIG
CIT	ENSG00000122966.9	706.18780	1580.65420	-1.16240	21.39740	19.31040	K562	PRPF8
CIT	ENSG00000122966.9	1440.59800	2210.18170	-0.61750	10.14840	8.93140	K562	PTBP1
CIT	ENSG00000122966.9	2272.33220	3845.46130	-0.75900	12.77390	11.00670	K562	PUF60
CIT	ENSG00000122966.9	5110.47250	3628.23550	0.49410	6.37100	5.58570	K562	PUS1
CIT	ENSG00000122966.9	818.46710	1609.88850	-0.97600	13.46610	11.64160	K562	RPS19
CIT	ENSG00000122966.9	2013.30790	3062.45220	-0.60510	7.41030	5.66400	K562	RPS3
CIT	ENSG00000122966.9	1670.82880	2069.01230	-0.30840	2.76510	1.68370	K562	SAFB
CIT	ENSG00000122966.9	1528.29030	1864.39080	-0.28680	2.20620	1.44440	K562	SF3B4
CIT	ENSG00000122966.9	1771.63260	1390.18970	0.34970	2.91470	1.61680	K562	SLBP
CIT	ENSG00000122966.9	3612.73480	2898.52940	0.31770	6.91060	5.50780	K562	SRPK2
CIT	ENSG00000122966.9	3058.03140	2328.42010	0.39320	6.64040	4.81380	K562	SRSF7
CIT	ENSG00000122966.9	1844.51080	1383.01960	0.41530	5.57940	3.64390	K562	SSB
CIT	ENSG00000122966.9	3009.92990	2390.03540	0.33260	2.52810	1.33610	K562	STAU1
CIT	ENSG00000122966.9	1409.17140	2329.17610	-0.72500	14.51740	12.63990	K562	SYNCRIP
CIT	ENSG00000122966.9	1476.54970	2192.75190	-0.57050	6.69180	5.55060	K562	TARDBP
CIT	ENSG00000122966.9	2097.38840	1545.24030	0.44070	3.82010	2.71490	K562	TIAL1
CIT	ENSG00000122966.9	2102.99130	1641.74320	0.35710	3.29980	2.24800	K562	TRIM56
CIT	ENSG00000122966.9	3501.08830	3039.99870	0.20360	2.70700	1.99550	K562	UPF1
CIT	ENSG00000122966.9	3579.57910	2601.22230	0.46050	6.47650	5.10360	K562	WDR3
CIT	ENSG00000122966.9	3914.95480	2879.37910	0.44310	5.65050	3.80520	K562	WRN
CIT	ENSG00000122966.9	1140.18900	1833.88490	-0.68560	3.63630	1.75460	K562	XRCC6
CIT	ENSG00000122966.9	4417.39670	2736.44470	0.69080	12.47500	10.49440	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CIT is not available on ENCORE database.

14 RBPs can affect the splicing of CIT :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CIT	ENSG00000122966.9	chr12	-	120241009	120241193			120221992	120222869	120260623	120260777	-0.21400	0.00174	0.03298	excluded	K562	SF3B4
SE	CIT	ENSG00000122966.9	chr12	-	120168299	120168435			120166306	120166411	120171968	120172162	-0.28200	0.00163	0.03087	excluded	HepG2	U2AF1
SE	CIT	ENSG00000122966.9	chr12	-	120148853	120148898			120148344	120148425	120149982	120150152	-0.34100	0.00022	0.00968	excluded	K562	AKAP8L
SE	CIT	ENSG00000122966.9	chr12	-	120148853	120148898			120148344	120148425	120149982	120150152	0.57400	0.00004	0.05657	included	HepG2	GRWD1
SE	CIT	ENSG00000122966.9	chr12	-	120237083	120237323			120222763	120222869	120241009	120241187	0.09900	0.00212	0.02302	included	K562	AQR
SE	CIT	ENSG00000122966.9	chr12	-	120148853	120148898			120148344	120148425	120149982	120150152	-0.75300	0.00004	0.01032	excluded	K562	HNRNPM
SE	CIT	ENSG00000122966.9	chr12	-	120148853	120148898			120148344	120148425	120149982	120150152	-0.25900	0.00340	0.08370	excluded	K562	UTP18
SE	CIT	ENSG00000122966.9	chr12	-	120148853	120148898			120148344	120148425	120149982	120150152	-0.39000	0.00077	0.03068	excluded	K562	TARDBP
SE	CIT	ENSG00000122966.9	chr12	-	120148853	120148898			120148344	120148425	120149982	120150152	-0.45000	0.00015	0.06505	excluded	K562	NCBP2
A3SS	CIT	ENSG00000122966.9	chr12	-	120156503	120156666			120156503	120156621	120158282	120158390	-0.14200	0.00060	0.05427	shorter	K562	AGGF1
A3SS	CIT	ENSG00000122966.9	chr12	-	120135780	120136027			120135780	120135859	120138549	120138630	-0.12700	0.00012	0.05950	shorter	K562	SBDS
A3SS	CIT	ENSG00000122966.9	chr12	-	120128205	120128359			120128205	120128256	120135463	120135669	0.42600	0.00070	0.00506	longer	K562	AQR
A3SS	CIT	ENSG00000122966.9	chr12	-	120220321	120220520			120220321	120220441	120221711	120221855	0.10200	0.00028	0.00225	longer	K562	AQR
A3SS	CIT	ENSG00000122966.9	chr12	-	120171968	120172211			120171968	120172162	120172964	120173162	0.06400	0.00037	0.00284	longer	K562	AQR
A3SS	CIT	ENSG00000122966.9	chr12	-	120156503	120156666			120156503	120156621	120158282	120158390	-0.12500	0.00127	0.05764	shorter	K562	PUS1
A5SS	CIT	ENSG00000122966.9	chr12	-	120221992	120222869			120222763	120222869	120221711	120221855	0.08900	0.00006	0.00344	longer	K562	PUS1
MXE	CIT	ENSG00000122966.9	chr12	-	120168299	120168435	120171968	120172162	120166306	120166411	120172964	120173162	0.12800	0.00343	0.04233	1included	K562	DROSHA
MXE	CIT	ENSG00000122966.9	chr12	-	120149982	120150152	120150395	120150500	120148344	120148425	120151007	120151099	-0.20800	0.00005	0.01777	2included	K562	WDR43

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CIT

General Information

Functions

Localization

Domains (AlphaFold: CIT)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CIT is not avaliable on ENCORE database.

24 proteins are bound to CIT RNA:

eCLIP assay for CIT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CIT is not available on ENCORE database.

166 RBPs can affect the gene expression of CIT :

The Knockdown/knockout RNA-Seq assay for CIT is not available on ENCORE database.

14 RBPs can affect the splicing of CIT :

The Knockdown/knockout RNA-Seq assay for CIT is not avaliable on ENCORE database.