SRSF9

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SRSF9	ENSG00000111786.8	96.62	99.66	98.14	ENCSR000AEF
HepG2	SRSF9	ENSG00000111786.8	161.19	141.75	151.47	ENCSR985KAT
K562	SRSF9	ENSG00000111786.8	135.79	120.91	128.35	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
eCLIP	eCLIP: 216	ENCSR773KRC	SRSF9	HepG2	Released	ENCAB278ULX	ENCSR060VZF
eCLIP	eCLIP: 4132	ENCSR381VNR	SRSF9	K562	Released	ENCAB278ULX	ENCSR219TIG
knockdown followed by RNA-seq	SRSF9-BGKLV11-K562	ENCSR113HRG	SRSF9	K562	Released		ENCSR129RWD	shRNA	KD% = 25.6,22.9
knockdown followed by RNA-seq	SRSF9-BGHLV12-HepG2	ENCSR597XHH	SRSF9	HepG2	Released		ENCSR603TCV	shRNA	KD% = 34.9,60.9
knockdown followed by RNA-seq	SRSF9-BGKcLV06-K562	ENCSR972AZD	SRSF9	K562	Released		ENCSR341TTW	CRISPR	KD% = 85.9,78.4
knockdown followed by RNA-seq	SRSF9-BGHcLV09-HepG2	ENCSR814JQP	SRSF9	HepG2	Released		ENCSR300EBW	CRISPR	KD% = 64.2,51.0
RNA Bind-n-Seq	RBNS: SRSF9	ENCSR724HZI	SRSF9	cell-free sample	Released		ENCSR927JUW

RBP	Exp_UID	Cell_Line	ENCODE_ACCESSION	Control_ENCODE_ACCESSION	ENCODE_Antibody_ID	Antibody	Lot_num	Status	Project
SRSF9	216	HepG2	ENCSR773KRC	ENCSR060VZF	ENCAB278ULX	RN081PW	1	Released	ENCODE3
SRSF9	4132	K562	ENCSR381VNR	ENCSR219TIG	ENCAB278ULX	RN081PW	001	Released	ENCODE4

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
SRSF9	ENCAB278ULX	RN081PW	1		Released, ENCODE3	Released, ENCODE3	NotReviewed, ENCODE3	BGKcLV06-35, Released, ENCODE3

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
SRSF9	K562	shRNA	ENCSR113HRG	ENCSR129RWD	SRSF9-LV11-55,SRSF9-LV11-56	Nontarget-LV11-1,nontarget-LV11-2	25.6,22.9	Released	ENCODE3
SRSF9	HepG2	shRNA	ENCSR597XHH	ENCSR603TCV	SRSF9-BGHLV12-79,SRSF9-BGHLV12-80	NT-BGHLV12-93,NT-BGHLV12-94	34.9,60.9	Released	ENCODE3
SRSF9	K562	CRISPR	ENCSR972AZD	ENCSR341TTW	SRSF9-BGKcLV06-35,SRSF9-BGKcLV06-36	NT-BGKcLV06-1,NT-BGKcLV06-2	85.9,78.4	Released	ENCODE3
SRSF9	HepG2	CRISPR			BGHcLV07-35,BGHcLV07-36	BGHcLV07-1,BGHcLV07-2	0.5,1.0	NotSatisfied	ENCODE3
SRSF9	HepG2	CRISPR	ENCSR814JQP	ENCSR300EBW	SRSF9-BGHcLV09-21,SRSF9-BGHcLV09-22	NT-BGHcLV09-1,NT-BGHcLV09-2	64.2,51.0	Released	ENCODE4
SRSF9	HepG2	CRISPR			BGHcLV10-41,BGHcLV10-42	BGHcLV10-1,BGHcLV10-2		NotSatisfied	ENCODE4

GeneName	gene_aliases	Status	Project	Note
SRSF9	SRSF9		Released	ENCODE3

RNA Targets

SRSF9 protein binds to 656 RNA regions.

The binding motifs of SRSF9

Proteins bound to RNA

SRSF9 RNA is bound by 20 proteins.

SRSF9 protein has 656 RNA targets:

Only display 100 entries as example. Please click "View All" button to see all 656 entries.

RBP	Chr	Start	End	Strand	log2(fold change)	-log(p-value)	Cell Line	Matched Gene	Matched Area
SRSF9	chr8	94746431	94746511	-	4.15233	8.90110	HepG2	RBM12B	CDS,intron-Distal
SRSF9	chr20	62370504	62370581	+	3.79260	5.79747	HepG2	RP4-583P15.14	intron-Distal
SRSF9	chr2	54197828	54197941	-	3.70613	6.12944	HepG2	PSME4	5'-UTR,CDS,intron-Distal,intron-Proximal
SRSF9	chrX	20269440	20269516	-	4.64132	5.63984	HepG2	RPS6KA3	intron-Distal
SRSF9	chr14	23528560	23528607	-	3.53381	3.99926	HepG2	ACIN1	CDS,intron-Distal
SRSF9	chr2	101494566	101494675	+	3.67209	4.88610	HepG2	NPAS2	intron-Distal
SRSF9	chr2	208633986	208634034	-	3.21286	3.16951	HepG2	FZD5	5'-UTR,intron-Distal
SRSF9	chr12	46765765	46765828	-	3.04903	4.15105	HepG2	SLC38A2	intron-Distal
SRSF9	chr7	76221314	76221419	+	3.76664	4.22172	HepG2	UPK3B, AC004980.7	intron-Distal
SRSF9	chr1	28834639	28834651	+	3.05346	4.89405	HepG2	SNHG3, RCC1	5'-UTR,intron-Proximal
SRSF9	chr6	33240048	33240099	+	4.51789	3.33119	HepG2	RPS18	intron-Distal
SRSF9	chr8	145579818	145579875	-	3.81862	3.33119	HepG2	FBXL6	CDS,intron-Distal,intron-Proximal
SRSF9	chr6	32937153	32937215	+	3.14623	3.16951	HepG2	BRD2	intron-Distal,intron-Proximal
SRSF9	chr17	80212981	80213029	-	3.40229	4.35363	HepG2	CSNK1D	intron-Distal,intron-Proximal
SRSF9	chr19	1360167	1360299	+	4.29110	3.58955	HepG2	MUM1	3'-UTR,5'-UTR,CDS
SRSF9	chr15	42129452	42129569	+	3.09243	4.95235	HepG2	JMJD7-PLA2G4B, JMJD7, PLA2G4B	3'-UTR,5'-UTR,intron-Distal
SRSF9	chr17	80848274	80848383	+	3.12258	3.16951	HepG2	TBCD	intron-Distal
SRSF9	chr17	40271588	40271593	-	4.50720	5.36870	HepG2	CTD-2132N18.3, KAT2A	CDS,intron-Distal,intron-Proximal
SRSF9	chr8	144671746	144671834	-	4.09812	7.63682	HepG2	EEF1D	CDS,intron-Distal,intron-Proximal
SRSF9	chr8	30413414	30413492	+	3.70613	3.07274	HepG2	RBPMS	intron-Distal
SRSF9	chr2	75768180	75768260	+	3.74986	3.26875	HepG2	AC007099.1	intron-Distal
SRSF9	chr20	34302218	34302245	-	3.78740	8.35021	HepG2	RBM39	3'-UTR,CDS,intron-Distal,intron-Proximal
SRSF9	chr16	84215814	84215947	-	3.60981	3.40562	HepG2	TAF1C	3'-UTR,CDS,intron-Distal,intron-Proximal
SRSF9	chr2	86260750	86260830	-	3.38929	3.30791	HepG2	POLR1A	CDS,intron-Distal,intron-Proximal
SRSF9	chr7	158243578	158243725	-	4.62888	5.38543	HepG2	PTPRN2	intron-Distal
SRSF9	chr8	141912321	141912436	-	3.56326	4.35138	HepG2	PTK2	intron-Distal
SRSF9	chr2	3326571	3326626	-	4.34605	4.36244	HepG2	TSSC1	intron-Distal
SRSF9	chr9	117037988	117038048	+	3.02806	6.37215	HepG2	COL27A1	3'-UTR,CDS
SRSF9	chr20	25457587	25457654	-	4.44542	8.38377	HepG2	NINL	CDS,intron-Distal
SRSF9	chr14	23528378	23528388	-	4.71670	14.46234	HepG2	ACIN1	CDS,intron-Distal
SRSF9	chr14	39735882	39735934	+	4.50074	16.30075	HepG2	CTAGE5, RP11-407N17.3	intron-Distal
SRSF9	chr6	43014673	43014720	-	3.30891	5.50927	HepG2	CUL7	CDS,intron-Distal
SRSF9	chr12	72056819	72056948	-	3.54446	4.88610	HepG2	ZFC3H1	CDS,intron-Distal
SRSF9	chr20	62374263	62374332	+	3.22833	4.37372	HepG2	SLC2A4RG	CDS
SRSF9	chr2	21243412	21243508	-	3.69133	9.60975	HepG2	APOB	intron-Distal
SRSF9	chr22	46152977	46153088	+	4.36710	5.38543	HepG2	ATXN10	intron-Distal
SRSF9	chr20	61533270	61533408	-	3.96161	3.84763	HepG2	DIDO1	intron-Distal
SRSF9	chr19	959691	959784	+	3.42010	3.64217	HepG2	ARID3A	intron-Distal
SRSF9	chr7	65551730	65551807	+	3.16331	3.30005	HepG2	ASL	CDS,intron-Distal,intron-Proximal
SRSF9	chr11	85375548	85375625	-	3.21687	7.79385	HepG2	CREBZF	CDS,intron-Distal
SRSF9	chr19	943751	943805	+	4.73160	7.06467	HepG2	ARID3A	intron-Distal
SRSF9	chr8	94746596	94746684	-	5.51954	12.85567	HepG2	RBM12B	CDS,intron-Distal,intron-Proximal
SRSF9	chr17	78777656	78777784	+	3.98035	3.58955	HepG2	RPTOR	intron-Distal
SRSF9	chr2	238488477	238488538	-	4.91168	16.50367	HepG2	RAB17	intron-Distal
SRSF9	chr18	55712330	55712391	+	3.05249	6.19852	HepG2	NEDD4L	intron-Distal
SRSF9	chr6	138745322	138745483	-	3.80433	8.25245	HepG2	NHSL1	CDS,intron-Distal
SRSF9	chr17	27074238	27074301	+	3.35985	3.87906	HepG2	TRAF4	3'-UTR,5'-UTR,CDS,intron-Proximal
SRSF9	chr17	38574073	38574146	-	3.02806	3.30791	HepG2	TOP2A	5'-UTR,intron-Distal
SRSF9	chr9	139743673	139743749	+	3.88138	3.33119	HepG2	PHPT1	5'-UTR
SRSF9	chr15	42129678	42129761	+	3.29110	3.40562	HepG2	PLA2G4B, JMJD7-PLA2G4B, JMJD7	3'-UTR,intron-Distal
SRSF9	chr22	24025910	24025916	-	3.39191	4.11623	HepG2	GUSBP11, KB-1572G7.2, AP000347.2	intron-Distal,intron-Proximal
SRSF9	chr4	1313321	1313500	+	3.96791	3.26875	HepG2	MAEA	intron-Distal
SRSF9	chr17	74379479	74379533	+	4.29310	3.84763	HepG2	SPHK1	intron-Distal
SRSF9	chr16	565569	565637	+	4.45286	3.33119	HepG2	RAB11FIP3	intron-Distal
SRSF9	chr20	35491840	35491942	-	4.34420	5.38543	HepG2	SOGA1	5'-UTR,intron-Distal
SRSF9	chr2	236579154	236579232	+	3.89191	3.58955	HepG2	AGAP1	CDS,intron-Distal
SRSF9	chr16	75298276	75298347	-	4.00955	9.86936	HepG2	BCAR1	5'-UTR,CDS,intron-Distal,intron-Proximal
SRSF9	chr2	153246146	153246225	+	4.45366	6.49399	HepG2	FMNL2	intron-Distal
SRSF9	chr22	50871595	50871648	+	3.70613	3.07274	HepG2	PPP6R2	intron-Distal
SRSF9	chr20	61542762	61542854	-	3.08358	4.24095	HepG2	DIDO1	CDS,intron-Distal
SRSF9	chr3	185363138	185363207	-	3.50311	4.11623	HepG2	IGF2BP2	3'-UTR,intron-Distal
SRSF9	chr7	158277846	158277938	-	4.38491	4.10529	HepG2	PTPRN2	intron-Distal
SRSF9	chr20	52197989	52198077	-	3.95738	9.86936	HepG2	ZNF217	CDS,intron-Distal,intron-Proximal
SRSF9	chr20	62366510	62366573	+	3.66913	3.04332	HepG2	ZGPAT, RP4-583P15.15	CDS,intron-Proximal
SRSF9	chr8	129044490	129044601	+	3.15958	4.24095	HepG2	PVT1	intron-Distal
SRSF9	chr9	100819061	100819152	+	4.10723	3.58955	HepG2	NANS	5'-UTR,CDS
SRSF9	chr11	129991665	129991702	+	4.00394	10.11462	HepG2	APLP2	3'-UTR,CDS,intron-Distal
SRSF9	chr17	79965683	79965705	+	3.59155	3.64217	HepG2	ASPSCR1	intron-Distal
SRSF9	chr7	23455028	23455106	-	5.26664	10.89255	HepG2	IGF2BP3	intron-Distal
SRSF9	chr2	3450413	3450476	+	4.36529	3.84763	HepG2	TRAPPC12	intron-Distal
SRSF9	chr21	46900612	46900630	+	3.54704	7.62004	HepG2	COL18A1	CDS,intron-Proximal
SRSF9	chrX	20269310	20269380	-	3.00658	4.47782	HepG2	RPS6KA3	intron-Distal
SRSF9	chrX	46948418	46948490	+	3.71286	3.04332	HepG2	RGN	intron-Distal
SRSF9	chr17	37618025	37618055	+	3.39075	4.95235	HepG2	CDK12	5'-UTR
SRSF9	chr7	97498259	97498338	-	3.26664	4.22172	HepG2	ASNS	CDS,intron-Distal,intron-Proximal
SRSF9	chr2	21244248	21244362	-	3.50365	5.99358	HepG2	APOB	intron-Distal
SRSF9	chr9	117050980	117051023	+	3.10960	6.63214	HepG2	COL27A1	3'-UTR,CDS,intron-Proximal
SRSF9	chr11	67811036	67811107	+	3.39885	3.87906	HepG2	TCIRG1	3'-UTR,5'-UTR,CDS,intron-Proximal
SRSF9	chr11	61036392	61036482	-	5.32414	10.39546	HepG2	VWCE	3'-UTR,CDS,intron-Distal,intron-Proximal
SRSF9	chr1	16959612	16959659	-	3.89539	3.07274	HepG2	CROCCP2	intron-Distal
SRSF9	chr19	1274399	1274442	+	3.91628	7.36708	HepG2	CIRBP	3'-UTR,intron-Proximal
SRSF9	chr19	943667	943751	+	4.93892	15.45772	HepG2	ARID3A	intron-Distal
SRSF9	chr2	39570522	39570594	-	3.83010	3.26875	HepG2	MAP4K3	3'-UTR,CDS,intron-Distal,intron-Proximal
SRSF9	chr4	1227761	1227838	-	3.08358	3.40562	HepG2	CTBP1	intron-Distal
SRSF9	chr14	19658182	19658277	+	4.56737	5.86741	HepG2	AL589743.1	intron-Distal
SRSF9	chr6	1910052	1910200	-	3.62173	5.79927	HepG2	GMDS	intron-Distal
SRSF9	chrX	48433598	48433674	+	3.56004	7.62004	HepG2	RBM3	5'-UTR,CDS,intron-Proximal
SRSF9	chr2	70057089	70057198	+	3.62888	4.35138	HepG2	GMCL1	CDS
SRSF9	chr16	87947160	87947287	-	3.58358	3.77258	HepG2	CA5A	intron-Distal
SRSF9	chr4	1227224	1227317	-	4.11430	7.39673	HepG2	CTBP1	intron-Distal
SRSF9	chr16	89346653	89346729	-	3.11110	5.03150	HepG2	ANKRD11	3'-UTR,CDS,intron-Distal
SRSF9	chr10	102748410	102748496	+	3.58358	5.57673	HepG2	C10orf2	CDS,intron-Distal
SRSF9	chr7	158198659	158198729	-	4.30203	3.33119	HepG2	PTPRN2	intron-Distal
SRSF9	chr11	47753738	47753830	-	3.44238	4.35363	HepG2	FNBP4	intron-Distal,intron-Proximal
SRSF9	chr8	123831420	123831520	+	4.11110	3.33119	HepG2	ZHX2	intron-Distal
SRSF9	chr22	24437657	24437721	+	3.49861	7.11367	HepG2	CABIN1	CDS,intron-Distal
SRSF9	chr2	240887601	240887736	-	3.77488	3.07274	HepG2	NDUFA10	intron-Distal
SRSF9	chr14	24620457	24620541	+	3.83906	4.86000	HepG2	RP11-468E2.4, RNF31	CDS,intron-Distal,intron-Proximal
SRSF9	chr17	8378289	8378396	+	3.45366	3.87906	HepG2	NDEL1	intron-Distal
SRSF9	chr9	100773558	100773628	+	3.99106	4.60337	HepG2	ANP32B	CDS

20 proteins are bound to SRSF9 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	120899498	120899597	-	3'-UTR,intron-Distal,intron-Proximal	5.18502	17.13613	HepG2	SUB1
chr12	120901808	120901934	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.15890	4.38249	K562	RBM15
chr12	120901856	120901926	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.49996	6.16999	HepG2	LIN28B
chr12	120899720	120899792	-	3'-UTR,intron-Distal	5.05843	9.21954	HepG2	TIA1
chr12	120901782	120901813	-	3'-UTR,CDS,intron-Distal	4.90348	6.96706	HepG2	LARP4
chr12	120901886	120901965	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.73291	27.90532	K562	AQR
chr12	120901758	120901855	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67462	8.08742	K562	LIN28B
chr12	120901765	120901872	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.23127	9.16588	K562	GRWD1
chr12	120901888	120901928	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.33678	3.70380	HepG2	LARP4
chr12	120899729	120899776	-	3'-UTR,intron-Distal	3.64532	3.70618	HepG2	TIAL1
chr12	120899747	120899792	-	3'-UTR,intron-Distal	3.34798	6.24060	HepG2	LARP4
chr12	120901681	120901755	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.29549	7.78008	K562	PRPF8
chr12	120899941	120899953	-	3'-UTR,CDS,intron-Distal	4.73567	21.23557	K562	YBX3
chr12	120899953	120899962	-	3'-UTR,CDS,intron-Distal	5.25297	20.91609	K562	YBX3
chr12	120899497	120899593	-	3'-UTR,intron-Distal,intron-Proximal	4.49531	36.92183	K562	PABPC4
chr12	120901704	120901760	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.62322	11.02376	K562	AQR
chr12	120899525	120899603	-	3'-UTR,intron-Distal,intron-Proximal	3.72546	30.15576	K562	PUM2
chr12	120901702	120901768	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.54076	7.13970	HepG2	PRPF8
chr12	120901751	120901818	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.15176	17.91098	K562	YBX3
chr12	120899962	120899965	-	3'-UTR,CDS,intron-Distal	4.87519	15.33972	K562	YBX3
chr12	120899776	120899792	-	3'-UTR,intron-Distal	3.97080	3.60227	HepG2	TIAL1
chr12	120901922	120901926	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.40584	8.09274	K562	LIN28B
chr12	120899506	120899606	-	3'-UTR,intron-Distal,intron-Proximal	3.94600	6.99535	K562	NOLC1
chr12	120901760	120901895	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.11649	8.65847	K562	ZNF800
chr12	120901813	120901863	-	3'-UTR,CDS,intron-Distal	4.14155	7.45053	HepG2	LARP4
chr12	120901761	120901828	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.25766	3.44907	HepG2	LIN28B
chr12	120899513	120899593	-	3'-UTR,intron-Distal,intron-Proximal	3.63371	7.61013	K562	DDX6
chr12	120899698	120899787	-	3'-UTR,intron-Distal	3.97008	22.25132	K562	TIA1
chr12	120901888	120901965	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30554	7.45900	HepG2	PRPF8
chr12	120901855	120901922	-	3'-UTR,CDS,intron-Distal	4.99234	12.30997	K562	LIN28B
chr12	120907311	120907503	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.88442	40.88673	K562	GEMIN5
chr12	120907261	120907475	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.13418	47.85752	K562	FTO
chr12	120907416	120907517	-	5'-UTR,intron-Distal,intron-Proximal	4.13232	24.68378	K562	DDX3X
chr12	120907365	120907416	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.62152	27.67483	K562	DDX3X
chr12	120907403	120907510	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.43052	400.00000	HepG2	DDX3X
chr12	120903477	120903509	-	CDS,intron-Distal,intron-Proximal	3.71303	10.63268	K562	UCHL5
chr12	120903464	120903502	-	CDS,intron-Distal,intron-Proximal	3.70995	10.35092	K562	LIN28B
chr12	120903392	120903438	-	CDS,intron-Distal,intron-Proximal	4.87384	11.17766	HepG2	PRPF8
chr12	120907355	120907403	-	CDS,intron-Distal,intron-Proximal	4.79085	49.49801	HepG2	DDX3X
chr12	120903503	120903559	-	CDS,intron-Distal,intron-Proximal	4.26174	5.47334	HepG2	LIN28B
chr12	120907223	120907258	-	CDS,intron-Distal	3.43580	7.52317	HepG2	GRWD1
chr12	120903428	120903443	-	CDS,intron-Distal,intron-Proximal	4.47062	8.38377	K562	LIN28B
chr12	120903502	120903568	-	CDS,intron-Distal,intron-Proximal	4.60504	18.21993	K562	LIN28B
chr12	120903476	120903558	-	CDS,intron-Distal,intron-Proximal	3.30250	11.21695	K562	GEMIN5
chr12	120903573	120903591	-	CDS,intron-Distal,intron-Proximal	3.01552	4.74029	K562	FTO
chr12	120903446	120903503	-	CDS,intron-Distal,intron-Proximal	3.80547	10.23107	HepG2	LIN28B
chr12	120903413	120903477	-	CDS,intron-Distal,intron-Proximal	3.07772	8.94908	K562	UCHL5
chr12	120903422	120903431	-	CDS,intron-Distal,intron-Proximal	4.88889	16.50383	K562	AQR
chr12	120903509	120903566	-	CDS,intron-Distal,intron-Proximal	3.10688	8.43119	K562	UCHL5
chr12	120907228	120907256	-	CDS,intron-Distal	4.27322	5.85562	K562	GEMIN5
chr12	120903406	120903443	-	CDS,intron-Distal,intron-Proximal	4.31540	5.61554	HepG2	EFTUD2
chr12	120903346	120903386	-	intron-Distal,intron-Proximal	3.81342	4.23459	K562	PRPF8
chr12	120903356	120903379	-	intron-Distal,intron-Proximal	3.68137	3.43550	K562	AQR
chr12	120903399	120903422	-	intron-Distal,intron-Proximal	4.92935	16.50383	K562	AQR
chr12	120903296	120903346	-	intron-Distal,intron-Proximal	3.19624	3.78727	K562	PRPF8
chr12	120903379	120903399	-	intron-Distal,intron-Proximal	5.67615	20.69618	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

No autoregularoty interactions between protein SRSF9 and its RNA.

Diffrential Expression

8,858 differentially expressed genes after Knockdown/Knockout SRSF9 protein.

88 RBPs can affect the levels of SRSF9.

8,858 differentially expressed genes after Knockdown/Knockout SRSF9 protein :

Only display 100 entries as example. Please click "View All" button to see all 8,858 entries.

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TSPAN6	ENSG00000000003.10	2286.73970	2007.13220	0.18810	2.03990	1.55160	HepG2	SRSF9
DPM1	ENSG00000000419.8	1568.11180	1804.06310	-0.20220	2.15370	1.65460	HepG2	SRSF9
C1orf112	ENSG00000000460.12	112.77820	234.33380	-1.05510	8.38310	7.51450	HepG2	SRSF9
GCLC	ENSG00000001084.6	10459.74800	1315.59700	2.99100	68.95550	66.96600	HepG2	SRSF9
NFYA	ENSG00000001167.10	1003.76730	787.08250	0.35070	3.87220	3.24170	HepG2	SRSF9
NIPAL3	ENSG00000001461.12	494.09840	349.73730	0.49840	4.44490	3.77650	HepG2	SRSF9
LAS1L	ENSG00000001497.12	479.98470	728.95110	-0.60280	7.91420	7.06580	HepG2	SRSF9
ANKIB1	ENSG00000001629.5	1521.62740	999.77850	0.60580	12.98070	11.94280	HepG2	SRSF9
CYP51A1	ENSG00000001630.11	5023.93530	11067.46470	-1.13940	70.30950	68.30900	HepG2	SRSF9
MYH16	ENSG00000002079.8	13.95850	1.40190	3.31550	2.99980	2.43000	HepG2	SRSF9
LAP3	ENSG00000002549.8	2340.49570	1880.69050	0.31550	5.32080	4.60010	HepG2	SRSF9
CD99	ENSG00000002586.13	2308.56690	2695.52700	-0.22360	3.07070	2.49480	HepG2	SRSF9
MAD1L1	ENSG00000002822.11	219.06070	323.65790	-0.56310	3.91500	3.28170	HepG2	SRSF9
LASP1	ENSG00000002834.13	11136.33150	6355.84570	0.80900	45.22660	43.53360	HepG2	SRSF9
SNX11	ENSG00000002919.10	315.88630	431.61580	-0.45030	3.52520	2.91890	HepG2	SRSF9
M6PR	ENSG00000003056.3	2445.48890	2017.79700	0.27720	4.05640	3.41240	HepG2	SRSF9
DBNDD1	ENSG00000003249.9	1117.25000	668.69500	0.74040	9.09470	8.19730	HepG2	SRSF9
CASP10	ENSG00000003400.10	1432.76600	978.97030	0.54940	10.98360	10.01280	HepG2	SRSF9
CFLAR	ENSG00000003402.15	2449.25000	1740.36030	0.49290	11.41740	10.43100	HepG2	SRSF9
RBM5	ENSG00000003756.12	2937.04350	2032.58830	0.53090	10.64830	9.69010	HepG2	SRSF9
MTMR7	ENSG00000003987.9	58.80700	11.50170	2.35400	7.71260	6.87570	HepG2	SRSF9
ARF5	ENSG00000004059.6	804.92200	1189.00680	-0.56280	10.05400	9.11710	HepG2	SRSF9
SARM1	ENSG00000004139.9	28.06020	10.62910	1.40040	1.91550	1.44030	HepG2	SRSF9
POLDIP2	ENSG00000004142.7	1760.05550	2424.17170	-0.46190	5.40850	4.68080	HepG2	SRSF9
PLXND1	ENSG00000004399.8	3212.65460	1637.46540	0.97220	36.41100	34.84400	HepG2	SRSF9
AK2	ENSG00000004455.12	2784.49190	3477.32280	-0.32060	6.09270	5.33020	HepG2	SRSF9
KDM1A	ENSG00000004487.11	2429.83500	3047.28770	-0.32670	6.01880	5.26110	HepG2	SRSF9
RBM6	ENSG00000004534.10	3514.57040	2521.19550	0.47910	5.53290	4.79910	HepG2	SRSF9
ARHGAP33	ENSG00000004777.14	51.97700	93.10810	-0.84100	2.32900	1.81340	HepG2	SRSF9
NDUFAB1	ENSG00000004779.5	1143.34010	1842.65320	-0.68850	18.35810	17.16620	HepG2	SRSF9
SLC25A13	ENSG00000004864.9	1896.38060	1503.38720	0.33490	5.06870	4.36240	HepG2	SRSF9
ST7	ENSG00000004866.14	300.55470	421.03700	-0.48630	2.24980	1.74110	HepG2	SRSF9
DVL2	ENSG00000004975.7	827.53730	965.69510	-0.22270	1.82380	1.35810	HepG2	SRSF9
UPF1	ENSG00000005007.8	1689.32000	2326.81210	-0.46190	9.74230	8.81690	HepG2	SRSF9
SKAP2	ENSG00000005020.8	668.07180	500.56170	0.41640	4.00530	3.36500	HepG2	SRSF9
SLC25A5	ENSG00000005022.5	3944.07100	8861.45710	-1.16790	29.94910	28.50620	HepG2	SRSF9
POLR2J	ENSG00000005075.11	360.22140	636.89430	-0.82220	12.12660	11.11500	HepG2	SRSF9
LIG3	ENSG00000005156.7	483.30420	700.17530	-0.53480	6.26690	5.49560	HepG2	SRSF9
ACSM3	ENSG00000005187.7	610.90040	1467.05150	-1.26390	37.34610	35.76100	HepG2	SRSF9
CIAPIN1	ENSG00000005194.10	890.97720	1232.20980	-0.46780	7.43030	6.60490	HepG2	SRSF9
CREBBP	ENSG00000005339.8	1579.95670	1341.07460	0.23640	2.81990	2.26420	HepG2	SRSF9
GCFC2	ENSG00000005436.9	532.59480	728.05700	-0.45100	4.95810	4.25880	HepG2	SRSF9
WDR54	ENSG00000005448.12	126.35450	184.97890	-0.54990	1.92100	1.44500	HepG2	SRSF9
CROT	ENSG00000005469.7	150.94000	252.10830	-0.74010	4.98880	4.28780	HepG2	SRSF9
ABCB4	ENSG00000005471.11	1216.32050	991.73150	0.29440	3.27550	2.68530	HepG2	SRSF9
KMT2E	ENSG00000005483.15	1883.74720	1471.39230	0.35630	5.82690	5.07840	HepG2	SRSF9
IBTK	ENSG00000005700.10	3413.26770	2242.39440	0.60600	16.76340	15.61010	HepG2	SRSF9
MYCBP2	ENSG00000005810.13	1367.39170	909.38090	0.58840	11.78570	10.78720	HepG2	SRSF9
ITGAL	ENSG00000005844.13	36.94390	217.56010	-2.55800	26.99720	25.60700	HepG2	SRSF9
PDK2	ENSG00000005882.7	276.48250	677.64410	-1.29330	26.94790	25.55910	HepG2	SRSF9
ITGA3	ENSG00000005884.13	34.30510	13.57610	1.33730	2.11650	1.62080	HepG2	SRSF9
ZFX	ENSG00000005889.11	892.41000	1503.53090	-0.75260	19.04910	17.84040	HepG2	SRSF9
GGNBP2	ENSG00000005955.8	1618.78730	1203.53340	0.42750	7.42100	6.59640	HepG2	SRSF9
ITGA2B	ENSG00000005961.13	69.30270	40.05590	0.79080	1.86240	1.39340	HepG2	SRSF9
ASB4	ENSG00000005981.8	101.42270	31.19350	1.70100	8.27210	7.40910	HepG2	SRSF9
CRLF1	ENSG00000006016.6	2205.92630	3046.45610	-0.46570	5.20920	4.49400	HepG2	SRSF9
TMEM98	ENSG00000006042.7	1508.57640	2366.72010	-0.64970	9.37020	8.45980	HepG2	SRSF9
AP2B1	ENSG00000006125.12	4499.57920	5078.06830	-0.17450	2.45340	1.92650	HepG2	SRSF9
SPATA20	ENSG00000006282.15	825.13730	1187.61090	-0.52540	8.48600	7.61370	HepG2	SRSF9
TNFRSF12A	ENSG00000006327.9	1421.67360	475.34750	1.58040	24.17260	22.84070	HepG2	SRSF9
MAP3K9	ENSG00000006432.11	567.91470	380.48000	0.57780	6.32030	5.54600	HepG2	SRSF9
BAIAP2L1	ENSG00000006453.9	1616.51880	654.91200	1.30340	48.65850	46.91410	HepG2	SRSF9
JHDM1D	ENSG00000006459.6	5031.19510	1741.87510	1.53020	120.18110	117.73570	HepG2	SRSF9
AGK	ENSG00000006530.11	389.58310	542.66300	-0.47810	4.38320	3.71820	HepG2	SRSF9
ALDH3B1	ENSG00000006534.11	62.16230	125.48180	-1.01340	4.10910	3.46130	HepG2	SRSF9
PHTF2	ENSG00000006576.12	423.45840	294.32450	0.52470	4.16680	3.51520	HepG2	SRSF9
GGCT	ENSG00000006625.13	209.31720	457.07980	-1.12680	16.02730	14.89560	HepG2	SRSF9
DBF4	ENSG00000006634.3	245.85520	342.84920	-0.47980	3.28120	2.69070	HepG2	SRSF9
IFRD1	ENSG00000006652.9	1787.85340	756.70450	1.24030	15.43520	14.31970	HepG2	SRSF9
ARSD	ENSG00000006756.11	616.27380	340.54580	0.85560	13.08180	12.03940	HepG2	SRSF9
PNPLA4	ENSG00000006757.7	179.96750	316.55550	-0.81470	7.22920	6.41230	HepG2	SRSF9
ADIPOR2	ENSG00000006831.9	5034.88450	5608.65390	-0.15570	1.91290	1.43830	HepG2	SRSF9
CCDC124	ENSG00000007080.6	122.68880	228.86840	-0.89950	2.59490	2.05680	HepG2	SRSF9
PAFAH1B1	ENSG00000007168.8	2674.74680	1904.63170	0.48980	11.72860	10.73270	HepG2	SRSF9
KIAA0100	ENSG00000007202.10	3782.92140	3098.30790	0.28790	5.34920	4.62620	HepG2	SRSF9
TRAPPC6A	ENSG00000007255.6	85.06420	254.16120	-1.57910	16.12140	14.98700	HepG2	SRSF9
PAX6	ENSG00000007372.16	17.76750	0.38630	5.52340	5.25510	4.53750	HepG2	SRSF9
RPUSD1	ENSG00000007376.3	89.15980	150.88880	-0.75900	3.44550	2.84390	HepG2	SRSF9
RHBDF1	ENSG00000007384.11	312.38770	102.11360	1.61310	20.92160	19.66320	HepG2	SRSF9
BAIAP3	ENSG00000007516.9	483.12520	120.50350	2.00320	41.86940	40.22400	HepG2	SRSF9
PIGQ	ENSG00000007541.10	115.36920	259.36860	-1.16870	10.58450	9.62850	HepG2	SRSF9
CRAMP1L	ENSG00000007545.11	751.44030	631.66600	0.25040	1.86770	1.39820	HepG2	SRSF9
TEAD3	ENSG00000007866.14	664.89550	1106.81330	-0.73520	14.87530	13.77740	HepG2	SRSF9
MYLIP	ENSG00000007944.10	132.40830	87.13560	0.60360	2.32310	1.80810	HepG2	SRSF9
E2F2	ENSG00000007968.6	57.49360	105.59730	-0.87710	2.20470	1.70060	HepG2	SRSF9
JARID2	ENSG00000008083.9	528.08120	826.87300	-0.64690	9.71470	8.79020	HepG2	SRSF9
CDK11A	ENSG00000008128.18	584.65530	365.88090	0.67610	8.65200	7.77190	HepG2	SRSF9
NADK	ENSG00000008130.11	986.15500	1641.29370	-0.73490	18.97710	17.76930	HepG2	SRSF9
CYTH3	ENSG00000008256.11	176.42110	120.93270	0.54470	2.37570	1.85700	HepG2	SRSF9
ADAM22	ENSG00000008277.10	100.53910	195.88000	-0.96220	6.05820	5.29800	HepG2	SRSF9
SYPL1	ENSG00000008282.3	1274.69760	1765.01560	-0.46950	8.84820	7.96060	HepG2	SRSF9
SPAG9	ENSG00000008294.16	4994.03620	4335.88840	0.20380	3.22770	2.64070	HepG2	SRSF9
CELSR3	ENSG00000008300.10	892.13530	668.20190	0.41690	5.15780	4.44650	HepG2	SRSF9
AASS	ENSG00000008311.10	298.68000	432.65290	-0.53460	4.58240	3.90510	HepG2	SRSF9
PLEKHG6	ENSG00000008323.11	492.52230	657.39480	-0.41660	4.15610	3.50510	HepG2	SRSF9
MPND	ENSG00000008382.11	145.28020	293.40160	-1.01400	9.29310	8.38610	HepG2	SRSF9
MGST1	ENSG00000008394.8	1939.11570	2237.61690	-0.20660	2.46880	1.94060	HepG2	SRSF9
NFIX	ENSG00000008441.12	529.47810	344.86580	0.61840	6.36650	5.59040	HepG2	SRSF9
ST3GAL1	ENSG00000008513.10	1842.50450	2290.72760	-0.31410	5.04070	4.33690	HepG2	SRSF9
IL32	ENSG00000008517.12	3604.30340	3056.06350	0.23790	3.83110	3.20300	HepG2	SRSF9
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

88 RBPs can affect the gene expression of SRSF9 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SRSF9	ENSG00000111786.4	4260.95180	2984.38470	0.51360	4.59290	3.92990	HepG2	AKAP1
SRSF9	ENSG00000111786.4	1311.29390	1858.19740	-0.50290	4.38020	3.27290	HepG2	BCLAF1
SRSF9	ENSG00000111786.4	1639.89270	1161.80430	0.49710	5.21740	4.42740	HepG2	BOP1
SRSF9	ENSG00000111786.4	800.55750	1246.57190	-0.63890	7.08840	5.92760	HepG2	CALR
SRSF9	ENSG00000111786.4	1577.11220	1861.86630	-0.23950	3.20840	2.50220	HepG2	CKAP4
SRSF9	ENSG00000111786.4	754.18070	1066.57600	-0.50000	4.41820	3.56650	HepG2	CPSF6
SRSF9	ENSG00000111786.4	1614.07040	1302.05560	0.30980	3.33410	2.21650	HepG2	YBX3
SRSF9	ENSG00000111786.4	1281.16700	1622.45580	-0.34070	2.89510	2.20250	HepG2	DDX21
SRSF9	ENSG00000111786.4	1382.88380	1967.33390	-0.50860	3.34220	1.93700	HepG2	DDX27
SRSF9	ENSG00000111786.4	1190.54760	1592.82360	-0.42000	3.63920	2.03910	HepG2	DDX28
SRSF9	ENSG00000111786.4	1388.57920	2102.59880	-0.59860	5.56300	4.51150	HepG2	DDX55
SRSF9	ENSG00000111786.4	1523.31790	1781.56880	-0.22590	2.35280	1.72010	HepG2	DKC1
SRSF9	ENSG00000111786.4	1488.94400	1278.48910	0.21970	1.91330	1.31670	HepG2	DNAJC21
SRSF9	ENSG00000111786.4	1913.36040	2360.67880	-0.30310	2.09700	1.57320	HepG2	EIF2S1
SRSF9	ENSG00000111786.4	1777.76490	2608.67290	-0.55330	5.00350	4.14750	HepG2	EIF4A3
SRSF9	ENSG00000111786.4	2634.83290	2997.66980	-0.18610	2.09030	1.34610	HepG2	EIF4G1
SRSF9	ENSG00000111786.4	1445.51830	1819.75610	-0.33220	3.10930	2.22660	HepG2	EWSR1
SRSF9	ENSG00000111786.4	2003.39400	2592.59750	-0.37200	3.06500	2.12690	HepG2	G3BP2
SRSF9	ENSG00000111786.4	715.30120	968.78360	-0.43760	3.21500	2.24050	HepG2	GEMIN5
SRSF9	ENSG00000111786.4	737.19090	1208.98210	-0.71370	7.00460	6.01730	HepG2	GPKOW
SRSF9	ENSG00000111786.4	1180.88270	1435.72270	-0.28190	1.99020	1.39130	HepG2	HNRNPC
SRSF9	ENSG00000111786.4	1304.87620	1633.50260	-0.32410	4.14230	3.28340	HepG2	HNRNPF
SRSF9	ENSG00000111786.4	894.44010	1153.75980	-0.36730	2.54200	1.93460	HepG2	HNRNPLL
SRSF9	ENSG00000111786.4	1670.07080	2633.43080	-0.65700	7.75460	6.67170	HepG2	MAGOH
SRSF9	ENSG00000111786.4	2079.74190	2648.09370	-0.34850	2.35020	1.76610	HepG2	MATR3
SRSF9	ENSG00000111786.4	1872.06500	2710.40920	-0.53390	5.17030	4.31640	HepG2	NCBP2
SRSF9	ENSG00000111786.4	759.05900	3012.98440	-1.98890	103.65050	100.10670	HepG2	NOL12
SRSF9	ENSG00000111786.4	1054.06550	1930.73240	-0.87320	5.80520	4.18690	HepG2	NONO
SRSF9	ENSG00000111786.4	1578.64400	2413.51180	-0.61240	6.67960	5.56640	HepG2	PABPC4
SRSF9	ENSG00000111786.4	1729.46280	2220.14280	-0.36030	5.87310	5.04170	HepG2	PCBP1
SRSF9	ENSG00000111786.4	1229.32310	1621.98910	-0.39990	2.97090	2.13580	HepG2	PRPF8
SRSF9	ENSG00000111786.4	1771.07450	2259.07400	-0.35110	5.30860	4.60140	HepG2	PTBP1
SRSF9	ENSG00000111786.4	2343.29050	2876.15340	-0.29560	2.75710	2.16140	HepG2	PUF60
SRSF9	ENSG00000111786.4	1958.52510	3053.15930	-0.64050	24.68750	23.28070	HepG2	PUM1
SRSF9	ENSG00000111786.4	1376.65940	1896.69400	-0.46230	9.33160	8.31200	HepG2	PUS1
SRSF9	ENSG00000111786.4	1779.37900	2220.48150	-0.31950	3.10220	2.39250	HepG2	RBM25
SRSF9	ENSG00000111786.4	1970.41750	2341.56950	-0.24900	3.14680	2.49520	HepG2	RECQL
SRSF9	ENSG00000111786.4	1194.66810	1759.70960	-0.55870	6.56620	5.57720	HepG2	RPLP0
SRSF9	ENSG00000111786.4	1004.41030	1468.28620	-0.54780	3.28740	2.25830	HepG2	RPS10
SRSF9	ENSG00000111786.4	743.11680	1058.80040	-0.51080	5.15180	4.34290	HepG2	RPS19
SRSF9	ENSG00000111786.4	1142.37650	1604.48340	-0.49010	3.78980	2.88820	HepG2	RRP9
SRSF9	ENSG00000111786.4	1722.45820	1270.11130	0.43940	8.31250	7.28460	HepG2	SAFB2
SRSF9	ENSG00000111786.4	2051.64090	2351.99530	-0.19710	2.10960	1.58240	HepG2	SF3B4
SRSF9	ENSG00000111786.4	2415.03660	2757.77340	-0.19150	2.61510	1.93080	HepG2	SLBP
SRSF9	ENSG00000111786.4	2854.86790	2454.97080	0.21760	2.71210	2.24280	HepG2	SRSF1
SRSF9	ENSG00000111786.4	848.75890	1228.85590	-0.53390	3.68970	2.51650	HepG2	SRSF3
SRSF9	ENSG00000111786.4	2325.10250	2839.77710	-0.28850	4.31310	3.56210	HepG2	SRSF5
SRSF9	ENSG00000111786.4	1237.61010	1604.86860	-0.37490	5.35560	4.44020	HepG2	SRSF7
SRSF9	ENSG00000111786.4	963.57550	1997.24680	-1.05150	39.64570	38.03110	HepG2	SRSF9
SRSF9	ENSG00000111786.4	2335.27220	2876.95630	-0.30100	5.00390	4.35370	HepG2	SSB
SRSF9	ENSG00000111786.4	1406.87250	2093.10580	-0.57320	5.17580	4.29580	HepG2	SUPV3L1
SRSF9	ENSG00000111786.4	477.37020	1124.73040	-1.23640	21.48110	19.82300	HepG2	TARDBP
SRSF9	ENSG00000111786.4	822.37470	1402.93620	-0.77060	7.39410	5.90450	HepG2	TFIP11
SRSF9	ENSG00000111786.4	1672.06740	2027.58760	-0.27810	2.47010	1.67750	HepG2	TIA1
SRSF9	ENSG00000111786.4	1054.51770	1500.81920	-0.50920	3.05020	1.50620	HepG2	TRA2A
SRSF9	ENSG00000111786.4	1623.03780	2974.20100	-0.87380	12.25820	10.44790	HepG2	UBE2L3
SRSF9	ENSG00000111786.4	949.47890	1236.46280	-0.38100	2.67790	1.93090	HepG2	UCHL5
SRSF9	ENSG00000111786.4	919.37090	1469.83320	-0.67690	4.90420	3.20920	HepG2	XRCC5
SRSF9	ENSG00000111786.4	880.50280	1084.59370	-0.30080	3.18930	2.47720	HepG2	ZC3H8
SRSF9	ENSG00000111786.4	1251.16770	1601.52340	-0.35620	6.07300	5.34520	HepG2	ZNF622
SRSF9	ENSG00000111786.4	2581.24360	1913.22580	0.43200	8.50170	7.57940	K562	AGGF1
SRSF9	ENSG00000111786.4	2986.65140	1990.79780	0.58510	8.53010	7.31980	K562	AKAP8L
SRSF9	ENSG00000111786.4	3748.52610	4533.45220	-0.27430	2.03720	1.51820	K562	AQR
SRSF9	ENSG00000111786.4	2539.03440	2088.82530	0.28150	3.33820	2.32680	K562	ATP5C1
SRSF9	ENSG00000111786.4	2358.81450	2716.11200	-0.20350	2.61300	1.68270	K562	BCLAF1
SRSF9	ENSG00000111786.4	1148.80470	1442.28160	-0.32820	2.83560	2.04350	K562	CPSF6
SRSF9	ENSG00000111786.4	1670.68780	2199.65060	-0.39680	3.98130	2.99990	K562	EIF4A3
SRSF9	ENSG00000111786.4	1274.21600	1570.41230	-0.30150	2.51510	1.31280	K562	EXOSC5
SRSF9	ENSG00000111786.4	2347.92600	1893.95490	0.30990	2.65670	1.82470	K562	FIP1L1
SRSF9	ENSG00000111786.4	1234.87980	1572.60070	-0.34880	2.37170	1.33960	K562	FKBP4
SRSF9	ENSG00000111786.4	2761.22490	2287.54350	0.27140	2.85920	2.24570	K562	FXR1
SRSF9	ENSG00000111786.4	1393.05580	1882.53760	-0.43440	2.79390	2.08190	K562	G3BP2
SRSF9	ENSG00000111786.4	1810.82350	2192.87250	-0.27620	3.00670	1.81670	K562	GLRX3
SRSF9	ENSG00000111786.4	1119.46160	1377.04670	-0.29880	2.17880	1.47220	K562	GPKOW
SRSF9	ENSG00000111786.4	980.03920	1812.12370	-0.88680	16.74650	15.35600	K562	HNRNPC
SRSF9	ENSG00000111786.4	2103.94730	1557.90390	0.43340	3.51590	2.45400	K562	HNRNPM
SRSF9	ENSG00000111786.4	2712.70710	2112.73540	0.36050	3.72100	2.74450	K562	KIF1C
SRSF9	ENSG00000111786.4	898.77260	1175.76660	-0.38760	2.16180	1.34800	K562	KRR1
SRSF9	ENSG00000111786.4	3014.70490	2366.79710	0.34900	4.13950	2.99070	K562	MBNL1
SRSF9	ENSG00000111786.4	2199.99260	1658.95320	0.40710	2.60940	1.75730	K562	NAA15
SRSF9	ENSG00000111786.4	2425.87490	4946.24240	-1.02780	15.83160	12.69370	K562	NOL12
SRSF9	ENSG00000111786.4	2155.46850	2561.63290	-0.24910	4.57350	3.64300	K562	NSUN2
SRSF9	ENSG00000111786.4	1332.26770	1997.55950	-0.58440	5.95920	4.73340	K562	PCBP3
SRSF9	ENSG00000111786.4	1153.40620	1532.21070	-0.40970	4.36290	3.35400	K562	POLR2G
SRSF9	ENSG00000111786.4	2728.10870	2150.15610	0.34340	3.05150	2.18390	K562	PPIG
SRSF9	ENSG00000111786.4	4290.56160	5248.32730	-0.29070	3.77210	2.50880	K562	PUM1
SRSF9	ENSG00000111786.4	2785.01890	1974.32810	0.49620	5.63510	4.89280	K562	PUS1
SRSF9	ENSG00000111786.4	2827.24060	1923.68280	0.55540	10.85110	9.70000	K562	RBM15
SRSF9	ENSG00000111786.4	988.87080	1309.53760	-0.40520	2.69150	1.73000	K562	SF3B1
SRSF9	ENSG00000111786.4	1686.07670	2188.22940	-0.37610	3.24770	1.45380	K562	SRP68
SRSF9	ENSG00000111786.4	2107.43100	2589.67360	-0.29730	5.23150	3.99070	K562	SRPK2
SRSF9	ENSG00000111786.4	860.56570	1091.26940	-0.34260	2.63540	1.61410	K562	SRSF4
SRSF9	ENSG00000111786.4	354.47100	1744.04320	-2.29870	98.52140	94.13560	K562	SRSF9
SRSF9	ENSG00000111786.4	1499.60170	2122.06230	-0.50090	4.33560	3.04010	K562	SUPV3L1
SRSF9	ENSG00000111786.4	1337.15380	1934.27290	-0.53260	4.90350	2.71650	K562	TFIP11
SRSF9	ENSG00000111786.4	1230.47770	1562.72660	-0.34480	2.34990	1.49270	K562	TIAL1
SRSF9	ENSG00000111786.4	1500.83640	1884.33260	-0.32830	3.49430	2.59240	K562	U2AF2
SRSF9	ENSG00000111786.4	1670.72470	2245.84070	-0.42680	3.77900	2.57240	K562	UCHL5
SRSF9	ENSG00000111786.4	2263.96100	2716.15430	-0.26270	3.75370	2.92850	K562	UPF1
SRSF9	ENSG00000111786.4	1918.42690	2324.12650	-0.27680	2.52120	1.68290	K562	WDR3
SRSF9	ENSG00000111786.4	1736.31760	2286.73430	-0.39730	3.31830	1.95620	K562	XRN2
SRSF9	ENSG00000111786.4	4192.69330	5107.29520	-0.28470	2.67120	1.82600	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

1,021 alternative splicing events after Knockdown/Knockout SRSF9 protein :

Only display 100 entries as example. Please click "View All" button to see all 1,021 entries.

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	KTN1	ENSG00000126777.13	chr14	+	56139889	56139973	56139646	56139730	56142552	56142636	0.15900	0.00000	0.00009	included	HepG2	SRSF9
SE	LUC7L3	ENSG00000108848.11	chr17	+	48826579	48826705	48823902	48824063	48827861	48828208	0.06500	0.00000	0.00054	included	HepG2	SRSF9
SE	KDM5B	ENSG00000117139.12	chr1	-	202735524	202735632	202733176	202733273	202736053	202736188	0.07900	0.00064	0.04382	included	HepG2	SRSF9
SE	SPIRE2	ENSG00000204991.6	chr16	+	89927583	89927694	89927090	89927203	89929883	89930018	0.08800	0.00032	0.02554	included	HepG2	SRSF9
SE	MRPS18C	ENSG00000163319.6	chr4	+	84379498	84379582	84378061	84378111	84380892	84380950	0.17600	0.00035	0.02752	included	HepG2	SRSF9
SE	USMG5	ENSG00000173915.8	chr10	-	105155502	105155789	105152138	105152223	105156165	105156198	0.13700	0.00000	0.00000	included	HepG2	SRSF9
SE	DUSP22	ENSG00000112679.10	chr6	+	335113	335163	311879	311962	345853	345928	0.27300	0.00026	0.02165	included	HepG2	SRSF9
SE	RNF146	ENSG00000118518.11	chr6	+	127607194	127607322	127601375	127601485	127607760	127609507	0.40500	0.00001	0.00119	included	HepG2	SRSF9
SE	SAE1	ENSG00000142230.7	chr19	+	47708318	47708386	47706927	47706997	47712415	47713886	0.06900	0.00100	0.06026	included	HepG2	SRSF9
SE	PDCD2	ENSG00000071994.6	chr6	-	170889089	170889193	170887944	170888058	170892144	170892276	0.08000	0.00049	0.03610	included	HepG2	SRSF9
SE	NSUN6	ENSG00000241058.1	chr10	-	18932497	18932569	18931404	18931484	18937418	18937574	0.13400	0.00101	0.06046	included	HepG2	SRSF9
SE	C1orf43	ENSG00000143612.14	chr1	-	154192311	154192413	154186932	154187050	154192817	154193082	0.11800	0.00080	0.05167	included	HepG2	SRSF9
SE	TMEM50B	ENSG00000142188.12	chr21	-	34828310	34828404	34828033	34828091	34832719	34832812	0.16800	0.00001	0.00137	included	HepG2	SRSF9
SE	ACSL4	ENSG00000068366.15	chrX	-	108934231	108934360	108926364	108926601	108939372	108939425	0.07000	0.00000	0.00002	included	HepG2	SRSF9
SE	UBP1	ENSG00000153560.7	chr3	-	33438236	33438370	33437653	33437772	33438536	33438627	0.22900	0.00000	0.00052	included	HepG2	SRSF9
SE	RABEPK	ENSG00000136933.12	chr9	+	127982817	127982979	127969842	127970000	127990188	127990338	0.22300	0.00004	0.00456	included	HepG2	SRSF9
SE	S100A16	ENSG00000188643.6	chr1	-	153581374	153581506	153580474	153580653	153581653	153581813	0.21700	0.00000	0.00001	included	HepG2	SRSF9
SE	KIF23	ENSG00000137807.9	chr15	+	69717620	69717662	69715477	69715668	69718408	69718521	0.63300	0.00196	0.09950	included	HepG2	SRSF9
SE	ALDH3A2	ENSG00000072210.14	chr17	+	19576463	19576588	19575033	19575269	19578808	19578812	0.12700	0.00011	0.01136	included	HepG2	SRSF9
SE	ABCB4	ENSG00000005471.11	chr7	-	87041208	87041349	87038551	87038708	87042932	87043033	0.28600	0.00147	0.08039	included	HepG2	SRSF9
SE	ZDHHC7	ENSG00000153786.8	chr16	-	85022368	85022479	85015475	85015600	85023909	85024241	0.13800	0.00000	0.00000	included	HepG2	SRSF9
SE	ANO6	ENSG00000177119.11	chr12	+	45664244	45664307	45609867	45610174	45695796	45695876	0.14100	0.00002	0.00314	included	HepG2	SRSF9
SE	CEP57	ENSG00000166037.6	chr11	+	95528679	95528723	95523676	95523907	95532395	95532552	0.14800	0.00019	0.01739	included	HepG2	SRSF9
SE	PLOD2	ENSG00000152952.7	chr3	-	145795648	145795711	145794568	145794682	145796902	145797044	0.19800	0.00000	0.00000	included	HepG2	SRSF9
SE	XYLB	ENSG00000093217.5	chr3	+	38413893	38414034	38411546	38411665	38414145	38414227	0.15600	0.00046	0.03482	included	HepG2	SRSF9
SE	ARHGEF11	ENSG00000132694.14	chr1	-	156908209	156908305	156907040	156907288	156909339	156909702	0.42400	0.00030	0.02476	included	HepG2	SRSF9
SE	ALDOA	ENSG00000149925.12	chr16	+	30077196	30077248	30075744	30075826	30078554	30078687	0.11300	0.00000	0.00019	included	HepG2	SRSF9
SE	CSF3R	ENSG00000119535.13	chr1	-	36943205	36943278	36940977	36941274	36945033	36945117	0.08700	0.00142	0.07831	included	HepG2	SRSF9
SE	IL17RB	ENSG00000056736.5	chr3	+	53890405	53890477	53889320	53889368	53890870	53891013	0.07400	0.00134	0.07480	included	HepG2	SRSF9
SE	IL17RB	ENSG00000056736.5	chr3	+	53892375	53892462	53891651	53891717	53892745	53892845	0.15400	0.00006	0.00682	included	HepG2	SRSF9
SE	PLD1	ENSG00000075651.11	chr3	-	171326090	171326156	171323088	171323206	171330068	171330222	0.08500	0.00006	0.00717	included	HepG2	SRSF9
SE	PLD1	ENSG00000075651.11	chr3	-	171404474	171404588	171395355	171395484	171405160	171405374	0.06300	0.00193	0.09872	included	HepG2	SRSF9
SE	RPE	ENSG00000197713.10	chr2	+	210882876	210882945	210882196	210882283	210884392	210884664	0.05900	0.00068	0.04623	included	HepG2	SRSF9
SE	BRE	ENSG00000158019.16	chr2	+	28532948	28533020	28521204	28521358	28561316	28561768	0.15400	0.00000	0.00037	included	HepG2	SRSF9
SE	ERRFI1	ENSG00000116285.8	chr1	-	8082452	8082527	8075554	8075752	8086217	8086356	0.05500	0.00047	0.03482	included	HepG2	SRSF9
SE	NT5C2	ENSG00000076685.14	chr10	-	104865114	104865138	104860991	104861083	104865462	104865558	0.13300	0.00064	0.04382	included	HepG2	SRSF9
SE	ELL2	ENSG00000118985.10	chr5	-	95268335	95268417	95255127	95255249	95278705	95278753	0.06300	0.00001	0.00135	included	HepG2	SRSF9
SE	NGDN	ENSG00000129460.11	chr14	+	23956405	23956465	23946711	23946769	23978548	23979071	0.28700	0.00101	0.06051	included	HepG2	SRSF9
SE	CCDC53	ENSG00000120860.6	chr12	-	102411497	102411583	102406719	102406970	102419751	102419816	0.08400	0.00052	0.03824	included	HepG2	SRSF9
SE	ITPR2	ENSG00000123104.7	chr12	-	26555775	26555848	26553060	26553191	26564252	26564345	0.05200	0.00020	0.01752	included	HepG2	SRSF9
SE	ITPR2	ENSG00000123104.7	chr12	-	26639749	26639866	26639036	26639293	26640000	26640184	0.09300	0.00006	0.00717	included	HepG2	SRSF9
SE	ITPR2	ENSG00000123104.7	chr12	-	26663409	26663564	26648084	26648193	26703179	26703288	0.06300	0.00002	0.00257	included	HepG2	SRSF9
SE	SLC35F5	ENSG00000115084.8	chr2	-	114490941	114490980	114489160	114489225	114492162	114492250	0.10300	0.00000	0.00001	included	HepG2	SRSF9
SE	APOC1	ENSG00000130208.5	chr19	+	45417928	45417990	45417503	45417746	45418128	45418206	0.10000	0.00000	0.00000	included	HepG2	SRSF9
SE	RPP14	ENSG00000163684.7	chr3	+	58296016	58296133	58292036	58292144	58296233	58296318	0.41800	0.00181	0.09414	included	HepG2	SRSF9
SE	ZNF274	ENSG00000171606.13	chr19	+	58721574	58721796	58721326	58721439	58722925	58723052	0.26100	0.00081	0.05201	included	HepG2	SRSF9
SE	MARC2	ENSG00000117791.11	chr1	+	220943722	220943898	220936251	220936392	220953359	220953421	0.31800	0.00031	0.02509	included	HepG2	SRSF9
SE	SEC31A	ENSG00000138674.12	chr4	-	83783686	83783827	83778841	83778917	83784470	83784545	0.06500	0.00006	0.00662	included	HepG2	SRSF9
SE	C8orf44	ENSG00000213865.3	chr8	+	67588979	67589137	67579886	67579936	67589876	67590189	0.48100	0.00095	0.05846	included	HepG2	SRSF9
SE	IL1RAP	ENSG00000196083.5	chr3	+	190273918	190274005	190231890	190232008	190282077	190282142	0.25100	0.00037	0.02903	included	HepG2	SRSF9
SE	BAG6	ENSG00000204463.8	chr6	-	31612083	31612191	31611858	31611971	31612301	31612379	0.13500	0.00009	0.00956	included	HepG2	SRSF9
SE	DCAF6	ENSG00000143164.11	chr1	+	167992225	167992285	167973770	167974031	168007608	168007726	0.27800	0.00003	0.00335	included	HepG2	SRSF9
SE	YIPF1	ENSG00000058799.9	chr1	-	54320673	54320724	54317391	54317943	54325728	54325826	0.45000	0.00010	0.01032	included	HepG2	SRSF9
SE	PICALM	ENSG00000073921.13	chr11	-	85701292	85701442	85694908	85695016	85707868	85707972	0.15500	0.00007	0.00736	included	HepG2	SRSF9
SE	PICALM	ENSG00000073921.13	chr11	-	85689112	85689136	85687665	85687725	85692171	85692271	0.14700	0.00073	0.04816	included	HepG2	SRSF9
SE	RP11-798K3.2	ENSG00000259347.1	chr15	-	67282249	67282381	67279495	67279985	67351477	67351591	0.06500	0.00067	0.04593	included	HepG2	SRSF9
SE	ELP3	ENSG00000134014.12	chr8	+	28040710	28040781	28019513	28019595	28047165	28047604	0.06700	0.00006	0.00692	included	HepG2	SRSF9
SE	DPY19L3	ENSG00000178904.14	chr19	+	32958379	32958532	32955633	32955690	32959636	32959719	0.58900	0.00002	0.00250	included	HepG2	SRSF9
SE	ZNF692	ENSG00000171163.11	chr1	-	249145061	249145146	249144880	249144980	249148135	249148250	0.09700	0.00107	0.06347	included	HepG2	SRSF9
SE	LCORL	ENSG00000178177.10	chr4	-	17887690	17887784	17842821	17847524	17910716	17910968	0.48600	0.00018	0.01651	included	HepG2	SRSF9
SE	SF3B1	ENSG00000115524.11	chr2	-	198283619	198283675	198283232	198283312	198285151	198285266	0.06100	0.00000	0.00039	included	HepG2	SRSF9
SE	SF3B1	ENSG00000115524.11	chr2	-	198263692	198263762	198263184	198263305	198264778	198264890	0.06700	0.00000	0.00000	included	HepG2	SRSF9
SE	MLLT4	ENSG00000130396.16	chr6	+	168314082	168314103	168311963	168312169	168314847	168314993	0.42900	0.00000	0.00000	included	HepG2	SRSF9
SE	ABCA5	ENSG00000154265.11	chr17	-	67247887	67248007	67246612	67246762	67249713	67249808	0.23600	0.00004	0.00454	included	HepG2	SRSF9
SE	MACF1	ENSG00000127603.19	chr1	+	39946591	39946702	39945469	39945681	39950272	39950402	0.05300	0.00076	0.04967	included	HepG2	SRSF9
SE	ADAM15	ENSG00000143537.9	chr1	+	155034379	155034451	155033238	155033308	155034720	155034845	0.27900	0.00058	0.04085	included	HepG2	SRSF9
SE	TAF1	ENSG00000147133.11	chrX	+	70640993	70641074	70627823	70628001	70641158	70641226	0.37900	0.00009	0.00976	included	HepG2	SRSF9
SE	UHRF2	ENSG00000147854.12	chr9	+	6465743	6465846	6460572	6460791	6475390	6475500	0.22600	0.00011	0.01102	included	HepG2	SRSF9
SE	NINL	ENSG00000101004.10	chr20	-	25490305	25490425	25485523	25485714	25491309	25491376	0.08300	0.00187	0.09652	included	HepG2	SRSF9
SE	MRRF	ENSG00000148187.13	chr9	+	125048317	125048445	125047447	125047566	125054027	125054077	0.30900	0.00022	0.01920	included	HepG2	SRSF9
SE	MORF4L2	ENSG00000123562.12	chrX	-	102939608	102939657	102933426	102933579	102940098	102940188	0.22600	0.00000	0.00000	included	HepG2	SRSF9
SE	ERBB2IP	ENSG00000112851.10	chr5	+	65364704	65364848	65350460	65350779	65370851	65371058	0.17000	0.00023	0.02011	included	HepG2	SRSF9
SE	GPR107	ENSG00000148358.15	chr9	+	132872648	132872705	132869797	132869818	132887193	132887243	0.24100	0.00038	0.02961	included	HepG2	SRSF9
SE	ARHGEF10L	ENSG00000074964.12	chr1	+	17961042	17961057	17958815	17958961	17961329	17961511	0.20100	0.00017	0.01581	included	HepG2	SRSF9
SE	CASC4	ENSG00000166734.14	chr15	+	44695084	44695252	44673003	44673174	44705533	44707956	0.18900	0.00001	0.00212	included	HepG2	SRSF9
SE	HNRNPD	ENSG00000138668.14	chr4	-	83292680	83292737	83280623	83280792	83294598	83295139	0.10400	0.00083	0.05310	included	HepG2	SRSF9
SE	RWDD1	ENSG00000111832.8	chr6	+	116895220	116895334	116892651	116892818	116901457	116901523	0.22100	0.00000	0.00020	included	HepG2	SRSF9
SE	NASP	ENSG00000132780.12	chr1	+	46072992	46074009	46072153	46072263	46078840	46078920	0.17300	0.00000	0.00033	included	HepG2	SRSF9
SE	CRYZ	ENSG00000116791.9	chr1	-	75196065	75196104	75190394	75190518	75198639	75199092	0.13000	0.00000	0.00003	included	HepG2	SRSF9
SE	CRYZ	ENSG00000116791.9	chr1	-	75172786	75172888	75172582	75172678	75175781	75175931	0.12400	0.00054	0.03920	included	HepG2	SRSF9
SE	RGN	ENSG00000130988.8	chrX	+	46949174	46949390	46943816	46943999	46951076	46951208	0.20600	0.00000	0.00015	included	HepG2	SRSF9
SE	CLK1	ENSG00000013441.11	chr2	-	201724847	201724938	201724402	201724469	201725960	201726189	0.23500	0.00008	0.00858	included	HepG2	SRSF9
SE	MITD1	ENSG00000158411.6	chr2	-	99789876	99789965	99787972	99788109	99790377	99790479	0.09300	0.00186	0.09603	included	HepG2	SRSF9
SE	TCF25	ENSG00000141002.14	chr16	+	89944868	89945035	89940051	89940267	89949758	89949920	0.25600	0.00000	0.00000	included	HepG2	SRSF9
SE	FANCL	ENSG00000115392.7	chr2	-	58415686	58415890	58392858	58393009	58425728	58425797	0.06500	0.00053	0.03878	included	HepG2	SRSF9
SE	RALY	ENSG00000125970.7	chr20	+	32652849	32652966	32619327	32619410	32659871	32660136	0.08100	0.00000	0.00000	included	HepG2	SRSF9
SE	CASP4	ENSG00000196954.8	chr11	-	104827323	104827422	104825473	104825728	104839245	104839302	0.09800	0.00000	0.00000	included	HepG2	SRSF9
SE	NONO	ENSG00000147140.11	chrX	+	70504246	70504303	70503432	70503571	70510478	70510641	0.09500	0.00003	0.00326	included	HepG2	SRSF9
SE	ENC1	ENSG00000171617.9	chr5	-	73933318	73933443	73932161	73932323	73936131	73937249	0.15100	0.00077	0.05008	included	HepG2	SRSF9
SE	ANKRD10	ENSG00000088448.10	chr13	-	111546455	111546549	111545044	111545610	111558379	111558471	0.27200	0.00000	0.00013	included	HepG2	SRSF9
SE	TERF2	ENSG00000132604.6	chr16	-	69402489	69402498	69402278	69402385	69404385	69404532	0.31500	0.00001	0.00108	included	HepG2	SRSF9
SE	VEZT	ENSG00000028203.13	chr12	+	95692637	95692719	95689826	95690034	95693940	95694948	0.20600	0.00000	0.00024	included	HepG2	SRSF9
SE	ACSS2	ENSG00000131069.15	chr20	+	33509765	33509906	33509610	33509669	33511125	33511234	0.07800	0.00001	0.00155	included	HepG2	SRSF9
SE	AUH	ENSG00000148090.7	chr9	-	94122652	94122722	94118369	94118437	94123909	94124169	0.21400	0.00117	0.06809	included	HepG2	SRSF9
SE	TIA1	ENSG00000116001.11	chr2	-	70455475	70455594	70454866	70454954	70456190	70456223	0.16500	0.00180	0.09362	included	HepG2	SRSF9
SE	TIA1	ENSG00000116001.11	chr2	-	70452459	70452700	70451685	70451761	70454866	70454954	0.08600	0.00192	0.09816	included	HepG2	SRSF9
SE	ABCC2	ENSG00000023839.6	chr10	+	101576820	101576953	101572774	101572901	101577064	101577241	0.13500	0.00069	0.04629	included	HepG2	SRSF9
SE	FXR1	ENSG00000114416.13	chr3	+	180693100	180693192	180687945	180688146	180693909	180694166	0.13500	0.00028	0.02382	included	HepG2	SRSF9
SE	FLNB	ENSG00000136068.10	chr3	+	58117653	58117716	58116467	58116635	58118534	58118658	0.07800	0.00003	0.00382	included	HepG2	SRSF9
SE	FLNB	ENSG00000136068.10	chr3	+	58127584	58127656	58124008	58124256	58128376	58128479	0.20000	0.00000	0.00001	included	HepG2	SRSF9

1 RBPs can affect the splicing of SRSF9 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
A3SS	SRSF9	ENSG00000111786.4	chr12	-	120901780	120902028			120901780	120901957	120903429	120903590	-0.47300	0.00000	0.00000	shorter	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SRSF9

General Information

Functions

Localization(RBPImage: SRSF9)

Domains (AlphaFold: SRSF9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

SRSF9 protein has 656 RNA targets:

20 proteins are bound to SRSF9 RNA:

No autoregularoty interactions between protein SRSF9 and its RNA.

Diffrential Expression

8,858 differentially expressed genes after Knockdown/Knockout SRSF9 protein :

88 RBPs can affect the gene expression of SRSF9 :

1,021 alternative splicing events after Knockdown/Knockout SRSF9 protein :

1 RBPs can affect the splicing of SRSF9 :

No autoregularoty alternative splicing events between protein SRSF9 and its RNA.