JMJD7-PLA2G4B

General Information

Gene Name       : JMJD7-PLA2G4B
Gene ID             : ENSG00000168970.22
Essential Gene : No

Functions

Localization

Domains (AlphaFold: JMJD7-PLA2G4B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878JMJD7-PLA2G4BENSG00000168970.220.300.780.54ENCSR000AEF
HepG2JMJD7-PLA2G4BENSG00000168970.222.391.091.74ENCSR985KAT
K562JMJD7-PLA2G4BENSG00000168970.221.150.800.97ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.



Proteins bound to RNA
  • JMJD7-PLA2G4B RNA is bound by 17 proteins.  







eCLIP assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.





17 proteins are bound to JMJD7-PLA2G4B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154213595542136007+3'-UTR,CDS4.184866.08299HepG2PPIG
chr154213672142136774+3'-UTR,CDS4.202103.77023K562ZNF622
chr154213589442135992+3'-UTR,CDS4.640575.32409HepG2PABPN1
chr154213680442136861+3'-UTR,CDS,intron-Proximal3.996516.23016HepG2PRPF8
chr154214007342140183+3'-UTR3.640574.02339HepG2PABPN1
chr154213670042136806+3'-UTR,CDS,intron-Proximal3.944416.62324HepG2PABPN1
chr154213595042136002+3'-UTR,CDS5.935418.32974K562DDX24
chr154213994742140010+3'-UTR,CDS,intron-Proximal3.073113.03634HepG2PABPN1
chr154213581542135876+3'-UTR,CDS,intron-Proximal4.603816.12902HepG2SF3B4
chr154213669742136770+3'-UTR,CDS6.015528.93227K562DDX24
chr154213846842138517+3'-UTR,CDS3.152333.02345K562ZNF622
chr154213961542139722+3'-UTR,CDS,intron-Distal,intron-Proximal3.895606.71165HepG2PABPN1
chr154213704442137061+3'-UTR,CDS,intron-Proximal4.635664.38106HepG2PPIG
chr154213591742135995+3'-UTR,CDS3.734654.24220K562ZNF622
chr154213676942136808+3'-UTR,CDS,intron-Proximal3.676534.51003HepG2PPIG
chr154213894342138999+3'-UTR,CDS3.955603.05716HepG2PABPN1
chr154213587342135909+3'-UTR,CDS,intron-Proximal4.695875.86613HepG2PPIG
chr154212945242129569+3'-UTR,5'-UTR,intron-Distal3.092434.95235HepG2SRSF9
chr154212952142129604+3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.139614.22598K562CSTF2T
chr154213298342133036+5'-UTR,CDS5.395157.95724HepG2PPIG
chr154212951242129593+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.016953.31074K562BUD13
chr154213371842133771+5'-UTR,CDS,intron-Proximal5.2744411.82907K562DDX24
chr154212950742129573+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.507606.87242K562DDX24
chr154213344042133531+5'-UTR,CDS,intron-Proximal3.9847213.10320HepG2PRPF8
chr154213372342133766+5'-UTR,CDS4.849946.91190HepG2PPIG
chr154213347042133525+5'-UTR,CDS,intron-Proximal4.986074.86944K562AQR
chr154213297842133054+5'-UTR,CDS3.772283.16390K562SRSF1
chr154213235342132428+5'-UTR,CDS,intron-Proximal3.741265.86107HepG2PPIG
chr154212950942129617+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.398053.87268K562SRSF1
chr154213304142133102+5'-UTR,CDS3.925945.58370HepG2PPIG
chr154213282942132860+5'-UTR,CDS,intron-Proximal4.824266.46301HepG2PPIG
chr154213442742134476+5'-UTR,CDS,intron-Proximal3.882006.08299HepG2PPIG
chr154213327142133293+5'-UTR,CDS5.419195.93845K562DDX24
chr154213273142132793+5'-UTR,CDS3.308416.00907HepG2PPIG
chr154213445242134525+5'-UTR,CDS,intron-Proximal3.512369.77953HepG2PRPF8
chr154213229042132367+5'-UTR,CDS,intron-Proximal4.2241312.25909K562SF3B4
chr154213442342134474+5'-UTR,CDS4.112114.18170HepG2PABPN1
chr154213446642134520+5'-UTR,CDS,intron-Proximal3.752914.95247K562PRPF8
chr154213297142132981+5'-UTR,CDS,intron-Proximal4.127123.49905HepG2PPIG
chr154213343242133467+5'-UTR,CDS4.686454.97342HepG2PPIG
chr154212941342129502+3'-UTR,5'-UTR,intron-Distal3.935123.24881HepG2SRSF1
chr154213342742133465+5'-UTR,CDS,intron-Proximal4.600485.23082K562DDX24
chr154213298142133078+5'-UTR,CDS5.006815.24929K562ZNF622
chr154212874242128797+CDS,intron-Proximal4.673335.35117HepG2PRPF8
chr154212778742127841+CDS5.155756.16445HepG2PPIG
chr154212894542129011+CDS,intron-Distal,intron-Proximal3.366163.13705K562BUD13
chr154212780842127957+CDS,intron-Distal,intron-Proximal5.459986.69228HepG2PRPF8
chr154213468142134764+CDS,intron-Distal,intron-Proximal4.7845511.37040K562DDX24
chr154212737342127422+CDS,intron-Proximal3.327745.58370HepG2PPIG
chr154213468642134765+CDS,intron-Distal,intron-Proximal4.626927.37772HepG2EFTUD2
chr154213475542134784+CDS,intron-Distal4.192755.24452HepG2PPIG
chr154212831042128354+CDS,intron-Proximal4.073683.31283K562PRPF8
chr154213478342134894+CDS,intron-Distal,intron-Proximal4.6834214.41880K562AQR
chr154212967842129761+3'-UTR,intron-Distal3.291103.40562HepG2SRSF9
chr154213104942131103+5'-UTR,intron-Distal3.115313.15535K562EWSR1
chr154213126042131340+intron-Distal3.654286.40565K562DDX24
chr154212789142127958+intron-Distal,intron-Proximal5.374888.34710K562AQR
chr154212396542124061+intron-Distal3.405183.56085K562LSM11
chr154213164342131726+intron-Distal3.255955.51539K562EWSR1
chr154213128942131395+intron-Distal3.396015.51539K562EWSR1
chr154213190242131957+intron-Distal4.641345.26338K562AKAP8L
chr154213017842130288+intron-Distal,intron-Proximal3.739675.09513HepG2HNRNPK
chr154213017542130284+intron-Distal,intron-Proximal3.441526.12137K562CSTF2T
chr154212877342128845+intron-Proximal3.676914.95247K562PRPF8
chr154212784342127891+intron-Proximal5.116076.83960K562AQR
chr154213454142134570+intron-Proximal3.133943.23382HepG2PRPF8
chr154212041742120468+intron-Proximal3.770934.04185HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for JMJD7-PLA2G4B is not available on ENCORE database.

  • 63 RBPs can affect the levels of JMJD7-PLA2G4B.  








The Knockdown/knockout RNA-Seq assay for JMJD7-PLA2G4B is not available on ENCORE database.





63 RBPs can affect the gene expression of JMJD7-PLA2G4B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
JMJD7-PLA2G4BENSG00000168970.16527.26410429.870400.294501.888301.30120HepG2AUH
JMJD7-PLA2G4BENSG00000168970.16106.20560165.45980-0.639602.260801.55870HepG2CALR
JMJD7-PLA2G4BENSG00000168970.16250.53650166.866000.586202.631701.57950HepG2CSTF2
JMJD7-PLA2G4BENSG00000168970.16324.92670200.627000.695502.607501.99860HepG2DDX3X
JMJD7-PLA2G4BENSG00000168970.16309.04240172.401400.841904.677103.89210HepG2DDX6
JMJD7-PLA2G4BENSG00000168970.16416.02150165.675401.328206.721805.82400HepG2EIF2S1
JMJD7-PLA2G4BENSG00000168970.16378.22250183.062601.046807.683906.62090HepG2EIF4A3
JMJD7-PLA2G4BENSG00000168970.16599.31180178.290901.7490018.9135017.22810HepG2EIF4B
JMJD7-PLA2G4BENSG00000168970.16886.83930493.542400.845409.622708.61070HepG2ETF1
JMJD7-PLA2G4BENSG00000168970.16196.89760316.50060-0.684804.524303.46130HepG2EWSR1
JMJD7-PLA2G4BENSG00000168970.16433.58910279.525400.633202.693601.93430HepG2FIP1L1
JMJD7-PLA2G4BENSG00000168970.16213.15070102.495501.056203.201302.10620HepG2FTO
JMJD7-PLA2G4BENSG00000168970.16265.41000133.253400.994002.522801.77070HepG2FUBP3
JMJD7-PLA2G4BENSG00000168970.16343.68470184.787800.895105.896204.91140HepG2FXR1
JMJD7-PLA2G4BENSG00000168970.16522.99020171.372901.6095019.9579018.25160HepG2G3BP1
JMJD7-PLA2G4BENSG00000168970.16344.28270181.992900.919606.256504.90770HepG2G3BP2
JMJD7-PLA2G4BENSG00000168970.16525.87440173.635301.5986020.5440018.80260HepG2HNRNPK
JMJD7-PLA2G4BENSG00000168970.16207.57860110.649600.907604.046003.29940HepG2HNRNPLL
JMJD7-PLA2G4BENSG00000168970.16297.25450200.700100.566602.953902.20780HepG2IGF2BP1
JMJD7-PLA2G4BENSG00000168970.16377.65500174.180801.116409.107807.96120HepG2IGF2BP2
JMJD7-PLA2G4BENSG00000168970.16454.82490175.226001.376007.045705.36270HepG2KHSRP
JMJD7-PLA2G4BENSG00000168970.16357.83830185.873400.944906.030005.12470HepG2MATR3
JMJD7-PLA2G4BENSG00000168970.16356.50210190.240500.906005.926405.01670HepG2NCBP2
JMJD7-PLA2G4BENSG00000168970.16402.05660169.369701.2471011.5341010.08470HepG2PABPC4
JMJD7-PLA2G4BENSG00000168970.16271.12140183.287500.564703.387502.79490HepG2PTBP1
JMJD7-PLA2G4BENSG00000168970.16471.75910198.473101.249003.930203.20350HepG2QKI
JMJD7-PLA2G4BENSG00000168970.16116.75230231.89100-0.990001.993701.38560HepG2RAVER1
JMJD7-PLA2G4BENSG00000168970.16366.24270180.139101.023609.329108.14730HepG2RBM25
JMJD7-PLA2G4BENSG00000168970.16407.96930203.969001.0000010.204409.28670HepG2NELFE
JMJD7-PLA2G4BENSG00000168970.16415.41380189.991801.1285013.2962012.09660HepG2RECQL
JMJD7-PLA2G4BENSG00000168970.16379.74390190.799200.992909.997408.97770HepG2SF3B4
JMJD7-PLA2G4BENSG00000168970.16292.47870465.91880-0.671706.730406.04390HepG2SRFBP1
JMJD7-PLA2G4BENSG00000168970.16436.74670294.768300.567103.610502.91250HepG2SRSF5
JMJD7-PLA2G4BENSG00000168970.16253.74780162.039900.646902.965202.39790HepG2SRSF9
JMJD7-PLA2G4BENSG00000168970.16556.28560404.532000.459502.907902.38560HepG2SSB
JMJD7-PLA2G4BENSG00000168970.16374.61690264.436500.502401.995001.40690HepG2SUPV3L1
JMJD7-PLA2G4BENSG00000168970.16443.28650179.046601.3078012.8363011.76200HepG2TAF15
JMJD7-PLA2G4BENSG00000168970.16183.05120107.911800.762303.129002.36300HepG2TARDBP
JMJD7-PLA2G4BENSG00000168970.16339.47700164.487301.045209.969508.40350HepG2TIA1
JMJD7-PLA2G4BENSG00000168970.16400.96350194.957701.040207.995807.22590HepG2TIAL1
JMJD7-PLA2G4BENSG00000168970.16124.04230239.04050-0.946404.861604.04170HepG2U2AF1
JMJD7-PLA2G4BENSG00000168970.16265.35440156.202900.764403.163302.35350HepG2UCHL5
JMJD7-PLA2G4BENSG00000168970.16240.77570169.270800.508302.060301.46770HepG2ZC3H8
JMJD7-PLA2G4BENSG00000168970.16295.89340201.946500.551002.548201.38200K562ABCF1
JMJD7-PLA2G4BENSG00000168970.16439.41320320.529000.455003.197802.43340K562EIF2S2
JMJD7-PLA2G4BENSG00000168970.16543.93890372.321400.546805.091203.45610K562EIF4B
JMJD7-PLA2G4BENSG00000168970.16264.95910145.205800.867605.586604.35760K562FIP1L1
JMJD7-PLA2G4BENSG00000168970.16128.66610198.51790-0.625602.498901.43520K562FKBP4
JMJD7-PLA2G4BENSG00000168970.16238.15850429.96780-0.852308.764607.76030K562FXR1
JMJD7-PLA2G4BENSG00000168970.1662.89980160.77390-1.353906.621405.42400K562G3BP2
JMJD7-PLA2G4BENSG00000168970.16211.31960316.61600-0.583302.911601.64420K562HNRNPK
JMJD7-PLA2G4BENSG00000168970.16347.99200196.837800.821905.803804.66600K562HSPD1
JMJD7-PLA2G4BENSG00000168970.16447.76110317.076800.497802.456301.50690K562IGF2BP2
JMJD7-PLA2G4BENSG00000168970.16644.48610884.10660-0.456102.251801.44550K562MBNL1
JMJD7-PLA2G4BENSG00000168970.16493.83490330.599700.578805.739704.71910K562NSUN2
JMJD7-PLA2G4BENSG00000168970.16367.15750225.000000.706404.053402.17180K562NUSAP1
JMJD7-PLA2G4BENSG00000168970.16125.44330277.82580-1.147107.807306.54180K562PRPF8
JMJD7-PLA2G4BENSG00000168970.16418.16430204.829401.029509.188007.33860K562PSIP1
JMJD7-PLA2G4BENSG00000168970.16206.21770323.71000-0.650504.505403.67820K562PTBP1
JMJD7-PLA2G4BENSG00000168970.16403.38490654.90770-0.699106.851905.56580K562PUF60
JMJD7-PLA2G4BENSG00000168970.16592.71910405.071500.549104.213502.22890K562RBM17
JMJD7-PLA2G4BENSG00000168970.16623.91850370.288100.752603.061801.65830K562SFPQ
JMJD7-PLA2G4BENSG00000168970.16236.50880317.34980-0.424202.121501.49310K562SRSF1
JMJD7-PLA2G4BENSG00000168970.16213.43040314.63250-0.559903.275802.38290K562SYNCRIP
JMJD7-PLA2G4BENSG00000168970.16430.52890309.803900.474702.937102.09100K562TIA1
JMJD7-PLA2G4BENSG00000168970.16323.22450197.002500.714204.069202.91750K562TIAL1
JMJD7-PLA2G4BENSG00000168970.16421.98900304.041000.472802.737501.65280K562TRA2A
JMJD7-PLA2G4BENSG00000168970.16315.67330209.373600.592302.981601.99180K562TRIM56
JMJD7-PLA2G4BENSG00000168970.16303.96370169.742000.840502.809201.41430K562TRIP6
JMJD7-PLA2G4BENSG00000168970.16190.13900297.32070-0.645003.327901.37160K562TRNAU1AP
JMJD7-PLA2G4BENSG00000168970.16100.66710161.04720-0.677902.801101.99240K562U2AF2
JMJD7-PLA2G4BENSG00000168970.16472.26500350.541000.429903.192902.42370K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for JMJD7-PLA2G4B is not available on ENCORE database.





11 RBPs can affect the splicing of JMJD7-PLA2G4B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4213814042138580421381404213824542138400421385800.086000.010790.09079includedHepG2SF3A3
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.416000.000010.00030includedHepG2PRPF8
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.385000.000140.00515includedHepG2SRSF1
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.362000.000700.01852includedK562RBM22
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.252000.012470.09231includedHepG2TAF15
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212693742127421421269374212709142127167421274210.520000.008460.06966includedHepG2U2AF1
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.336000.000080.00294includedHepG2TIAL1
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.213000.008500.07597includedHepG2NCBP2
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.303000.000600.00609includedHepG2SF3B4
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.303000.000010.00016includedHepG2RBM22
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.281000.002630.04026includedHepG2SRSF9
RIJMJD7-PLA2G4BENSG00000168970.16chr15+4212867242129138421286724212874942128978421291380.171000.000350.02868includedHepG2SSB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.