JMJD7-PLA2G4B

General Information

Gene Name : JMJD7-PLA2G4B
Gene ID : ENSG00000168970.22
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: JMJD7-PLA2G4B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	JMJD7-PLA2G4B	ENSG00000168970.22	0.30	0.78	0.54	ENCSR000AEF
HepG2	JMJD7-PLA2G4B	ENSG00000168970.22	2.39	1.09	1.74	ENCSR985KAT
K562	JMJD7-PLA2G4B	ENSG00000168970.22	1.15	0.80	0.97	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.

Proteins bound to RNA

JMJD7-PLA2G4B RNA is bound by 17 proteins.

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eCLIP assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.

17 proteins are bound to JMJD7-PLA2G4B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	42134783	42134894	+	CDS,intron-Distal,intron-Proximal	4.68342	14.41880	K562	AQR
chr15	42133440	42133531	+	5'-UTR,CDS,intron-Proximal	3.98472	13.10320	HepG2	PRPF8
chr15	42132290	42132367	+	5'-UTR,CDS,intron-Proximal	4.22413	12.25909	K562	SF3B4
chr15	42133718	42133771	+	5'-UTR,CDS,intron-Proximal	5.27444	11.82907	K562	DDX24
chr15	42134681	42134764	+	CDS,intron-Distal,intron-Proximal	4.78455	11.37040	K562	DDX24
chr15	42134452	42134525	+	5'-UTR,CDS,intron-Proximal	3.51236	9.77953	HepG2	PRPF8
chr15	42136697	42136770	+	3'-UTR,CDS	6.01552	8.93227	K562	DDX24
chr15	42127891	42127958	+	intron-Distal,intron-Proximal	5.37488	8.34710	K562	AQR
chr15	42135950	42136002	+	3'-UTR,CDS	5.93541	8.32974	K562	DDX24
chr15	42132983	42133036	+	5'-UTR,CDS	5.39515	7.95724	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 67 entries

eCLIP assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for JMJD7-PLA2G4B is not available on ENCORE database.
63 RBPs can affect the levels of JMJD7-PLA2G4B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for JMJD7-PLA2G4B is not available on ENCORE database.

63 RBPs can affect the gene expression of JMJD7-PLA2G4B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
JMJD7-PLA2G4B	ENSG00000168970.16	525.87440	173.63530	1.59860	20.54400	18.80260	HepG2	HNRNPK
JMJD7-PLA2G4B	ENSG00000168970.16	522.99020	171.37290	1.60950	19.95790	18.25160	HepG2	G3BP1
JMJD7-PLA2G4B	ENSG00000168970.16	599.31180	178.29090	1.74900	18.91350	17.22810	HepG2	EIF4B
JMJD7-PLA2G4B	ENSG00000168970.16	415.41380	189.99180	1.12850	13.29620	12.09660	HepG2	RECQL
JMJD7-PLA2G4B	ENSG00000168970.16	443.28650	179.04660	1.30780	12.83630	11.76200	HepG2	TAF15
JMJD7-PLA2G4B	ENSG00000168970.16	402.05660	169.36970	1.24710	11.53410	10.08470	HepG2	PABPC4
JMJD7-PLA2G4B	ENSG00000168970.16	407.96930	203.96900	1.00000	10.20440	9.28670	HepG2	NELFE
JMJD7-PLA2G4B	ENSG00000168970.16	379.74390	190.79920	0.99290	9.99740	8.97770	HepG2	SF3B4
JMJD7-PLA2G4B	ENSG00000168970.16	886.83930	493.54240	0.84540	9.62270	8.61070	HepG2	ETF1
JMJD7-PLA2G4B	ENSG00000168970.16	339.47700	164.48730	1.04520	9.96950	8.40350	HepG2	TIA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 72 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for JMJD7-PLA2G4B is not available on ENCORE database.

11 RBPs can affect the splicing of JMJD7-PLA2G4B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.41600	0.00001	0.00030	included	HepG2	PRPF8
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.30300	0.00001	0.00016	included	HepG2	RBM22
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.33600	0.00008	0.00294	included	HepG2	TIAL1
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.38500	0.00014	0.00515	included	HepG2	SRSF1
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.17100	0.00035	0.02868	included	HepG2	SSB
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.30300	0.00060	0.00609	included	HepG2	SF3B4
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.36200	0.00070	0.01852	included	K562	RBM22
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.28100	0.00263	0.04026	included	HepG2	SRSF9
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42126937	42127421	42126937	42127091	42127167	42127421	0.52000	0.00846	0.06966	included	HepG2	U2AF1
RI	JMJD7-PLA2G4B	ENSG00000168970.16	chr15	+	42128672	42129138	42128672	42128749	42128978	42129138	0.21300	0.00850	0.07597	included	HepG2	NCBP2

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

JMJD7-PLA2G4B

General Information

Functions

Localization

Domains (AlphaFold: JMJD7-PLA2G4B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.

17 proteins are bound to JMJD7-PLA2G4B RNA:

eCLIP assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for JMJD7-PLA2G4B is not available on ENCORE database.

63 RBPs can affect the gene expression of JMJD7-PLA2G4B :

The Knockdown/knockout RNA-Seq assay for JMJD7-PLA2G4B is not available on ENCORE database.

11 RBPs can affect the splicing of JMJD7-PLA2G4B :

The Knockdown/knockout RNA-Seq assay for JMJD7-PLA2G4B is not avaliable on ENCORE database.