TRNAU1AP

General Information

Gene Name       : TRNAU1AP
Gene ID             : ENSG00000180098.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TRNAU1AP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRNAU1APENSG00000180098.921.6619.4120.54ENCSR000AEF
HepG2TRNAU1APENSG00000180098.913.4520.2216.84ENCSR985KAT
K562TRNAU1APENSG00000180098.933.2029.5431.37ENCSR000AEO

Assays

3 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq TRNAU1AP-BGKcLV06-K562ENCSR889MBFTRNAU1APK562ReleasedENCSR341TTW   CRISPRKD% = 83.7,70.6
knockdown followed by RNA-seq TRNAU1AP-BGHcLV10-HepG2ENCSR481AIBTRNAU1APHepG2ReleasedENCSR775ZWO   CRISPRKD% = 58.6,53.2
RNA Bind-n-SeqRBNS: TRNAU1APENCSR419XDNTRNAU1APcell-free sampleReleasedENCSR837OWO  






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
TRNAU1APENCAB780SOAGTX12163140863Released, ENCODE3Released, ENCODE3BGHcLV10-51, Released, ENCODE4BGKcLV06-39, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
TRNAU1APK562CRISPRENCSR889MBFENCSR341TTWTRNAU1AP-BGKcLV06-39,TRNAU1AP-BGKcLV06-40NT-BGKcLV06-1,NT-BGKcLV06-283.7,70.6ReleasedENCODE3
TRNAU1APHepG2CRISPRBGHcLV07-39,BGHcLV07-40BGHcLV07-1,BGHcLV07-20.0,0.0NotSatisfiedENCODE3
TRNAU1APHepG2CRISPRBGHcLV09-25,BGHcLV09-26BGHcLV09-1,BGHcLV09-254.8,52.5NotSatisfiedENCODE4
TRNAU1APHepG2CRISPRENCSR481AIBENCSR775ZWOTRNAU1AP-BGHcLV10-51,TRNAU1AP-BGHcLV10-52NT-BGHcLV10-1,NT-BGHcLV10-258.6,53.2ReleasedENCODE4
TRNAU1APRibo-STAMP-293TshRNABGRSLV05-29,BGRSLV05-30BGRSLV05-1,BGRSLV05-2NotSatisfiedENCORE2
TRNAU1AP293TshRNABG293LV03-23,BG293LV03-24BG293LV03-1,BG293LV03-2NotSatisfiedENCORE2
TRNAU1AP293TshRNATRNAU1AP-BG293LV03-25,TRNAU1AP-BG293LV03-26NT-BG293LV03-1,NT-BG293LV03-2,SubmittingENCORE2
TRNAU1AP293TshRNATRNAU1AP-BG293LV06-31B,TRNAU1AP-BG293LV06-32BNT-BG293LV06-1B,NT-BG293LV06-2B,SequencedENCORE2


  RNA Bind-n-Seqn  
  GeneName    gene_aliases    Status    Project    Note  
TRNAU1APTRNAU1APReleasedENCODE3


  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
TRNAU1APProduct_ID: GTX121631
Lot_ID: 40863
Source: GeneTex
Target Name: TRNAU1AP-human		 HepG2_Genetex_GTX121631_40863_TRNAU1AP.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using TRNAU1AP specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-TRNAU1AP antibody (lanes under 'TRNAU1AP').
 TRNAU1AP-HEPG2-CRISPR.png<br>Caption: Western blot following CRISPR against TRNAU1AP in HepG2 whole cell lysate using TRNAU1AP specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against TRNAU1AP.TRNAU1AP protein appears as the green band, Tubulin serves as a control and appears in red.
 K562_Genetex_GTX121631_40863_TRNAU1AP.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using TRNAU1AP specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-TRNAU1AP antibody (lanes under 'TRNAU1AP').
 TRNAU1AP-CRISPR-K562.png<br>Caption: Western blot following CRISPR against TRNAU1AP in K562 whole cell lysate using TRNAU1AP specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against TRNAU1AP. TRNAU1AP protein appears as the green arrow, Tubulin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for TRNAU1AP is not avaliable on ENCORE database.


  • The binding motifs of TRNAU1AP

    • Trulli

Proteins bound to RNA
  • TRNAU1AP RNA is bound by 19 proteins.  







eCLIP assay for TRNAU1AP is not avaliable on ENCORE database.





19 proteins are bound to TRNAU1AP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12887960228879671+5'-UTR,CDS,intron-Proximal3.630723.77385HepG2NCBP2
chr12887961528879650+5'-UTR,CDS,intron-Proximal3.639766.98150K562DDX3X
chr12888714228887174+CDS,intron-Proximal3.208604.51003HepG2PPIG
chr12890398728904058+CDS,intron-Proximal3.874889.59600K562AQR
chr12889387528893928+CDS,intron-Proximal4.007555.36555HepG2BCLAF1
chr12889377528893916+CDS,intron-Proximal3.329536.94506K562DDX24
chr12889132428891439+CDS,intron-Proximal3.410669.64125K562PRPF8
chr12890397028904080+CDS,intron-Proximal3.461497.42773K562BUD13
chr12888713428887198+CDS,intron-Proximal3.645435.38969K562U2AF2
chr12888018028880223+CDS3.156344.34695HepG2BCLAF1
chr12888017228880244+CDS3.1261712.58821K562DDX3X
chr12888015128880218+CDS,intron-Proximal4.096654.30417K562YBX3
chr12890401328904053+CDS4.176893.79199HepG2PPIG
chr12889382928893924+CDS3.828177.91657HepG2PPIG
chr12888015128880172+CDS,intron-Proximal3.829778.96385K562DDX3X
chr12888009328880156+CDS,intron-Proximal4.569208.54916K562SF3B4
chr12890397728904057+CDS,intron-Proximal3.943254.42776HepG2BUD13
chr12889387128893929+CDS,intron-Proximal3.502464.25142K562BUD13
chr12889839128898490+CDS,intron-Proximal3.6357710.15139K562EFTUD2
chr12889133328891413+CDS,intron-Proximal4.090074.54401K562KHSRP
chr12888782228887964+CDS,intron-Proximal4.5259010.98561K562PRPF8
chr12889841128898486+CDS,intron-Proximal6.7026543.84837K562AQR
chr12889770728897850+CDS3.039306.47220K562UCHL5
chr12888713128887181+CDS,intron-Proximal3.066615.40388HepG2U2AF2
chr12889132228891389+CDS,intron-Proximal3.009746.08629HepG2PRPF8
chr12888718528887245+CDS,intron-Proximal4.068985.35703HepG2BCLAF1
chr12888782028887930+CDS,intron-Proximal4.308098.66247K562EFTUD2
chr12888022328880249+CDS3.469145.76104HepG2BCLAF1
chr12889124428891366+CDS,intron-Proximal3.983013.85450K562SRSF1
chr12888017528880251+CDS,intron-Proximal3.011145.01393K562UCHL5
chr12889837828898509+CDS,intron-Proximal3.420168.40293K562BUD13
chr12889366228893762+intron-Distal,intron-Proximal3.537847.41757K562PTBP1
chr12889348028893544+intron-Distal4.060868.64802HepG2U2AF2
chr12889137128891467+intron-Distal,intron-Proximal3.408863.62357HepG2U2AF2
chr12889232828892468+intron-Distal4.569666.09551K562FUS
chr12889955928899608+intron-Distal3.165643.40404HepG2ILF3
chr12889162828891727+intron-Distal3.497859.20352K562KHSRP
chr12889044028890610+intron-Distal3.897833.06194K562ILF3
chr12889164028891746+intron-Distal3.178104.50097K562FUS
chr12889333728893436+intron-Distal3.999787.55138K562KHSRP
chr12889348428893568+intron-Distal3.951547.24347K562U2AF2
chr12889157828891627+intron-Distal3.037174.96160K562KHSRP
chr12888762328887673+intron-Distal,intron-Proximal4.651573.45799HepG2U2AF2
chr12888635428886403+intron-Distal4.993205.40008K562SF3B4
chr12889365628893773+intron-Distal,intron-Proximal5.492848.13723HepG2PTBP1
chr12887990728880018+intron-Distal,intron-Proximal3.182124.88853HepG2PRPF4
chr12889134628891397+intron-Proximal4.012855.47926K562AQR
chr12888008728880138+intron-Proximal3.929714.76523HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRNAU1AP is not avaliable on ENCORE database.



Diffrential Expression
  • 292 differentially expressed genes after Knockdown/Knockout TRNAU1AP protein.  





  • 55 RBPs can affect the levels of TRNAU1AP.  







292 differentially expressed genes after Knockdown/Knockout TRNAU1AP protein :

Only display 100 entries as example. Please click "View All" button to see all 292 entries.     

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KDM1AENSG00000004487.113056.972504058.26940-0.408803.301401.35710K562TRNAU1AP
CDC27ENSG00000004897.73453.324602357.978500.550305.304002.81880K562TRNAU1AP
SLC4A1ENSG00000004939.92768.902401943.646700.510405.346302.84980K562TRNAU1AP
SLC25A5ENSG00000005022.54246.815805828.70640-0.456804.136201.94720K562TRNAU1AP
CREBBPENSG00000005339.82072.234101474.521700.490804.087601.91710K562TRNAU1AP
TNFRSF12AENSG00000006327.9138.75060246.94190-0.831703.710701.63110K562TRNAU1AP
DBF4ENSG00000006634.32319.516301716.373500.434403.451701.45270K562TRNAU1AP
RPS20ENSG00000008988.59169.9823012722.85780-0.472404.926602.50160K562TRNAU1AP
NME2ENSG00000011052.17121.24950292.51780-1.270504.788802.38460K562TRNAU1AP
TMSB10ENSG00000034510.42434.270304180.38890-0.7801010.211007.00970K562TRNAU1AP
AP2S1ENSG00000042753.7589.15130850.75590-0.530103.438901.44360K562TRNAU1AP
YTHDC2ENSG00000047188.111538.108301053.196100.546303.314101.36490K562TRNAU1AP
LETMD1ENSG00000050426.11903.971501247.24910-0.464403.316901.36610K562TRNAU1AP
SLC2A3ENSG00000059804.112894.791305143.37600-0.8293012.587008.98780K562TRNAU1AP
YBX3ENSG00000060138.82863.463302113.289500.438203.246601.32560K562TRNAU1AP
NDUFB4ENSG00000065518.71021.857701380.62790-0.434103.370501.38930K562TRNAU1AP
ZNRD1ENSG00000066379.10358.60400525.48900-0.551303.343301.37370K562TRNAU1AP
LRRC40ENSG00000066557.5371.62090551.31360-0.569003.271901.33540K562TRNAU1AP
PAGE1ENSG00000068985.4428.69560620.77130-0.534103.398501.41210K562TRNAU1AP
ASNSENSG00000070669.125314.444504008.344900.406803.822801.71500K562TRNAU1AP
RPL31ENSG00000071082.62943.359004596.38460-0.643007.129004.36450K562TRNAU1AP
ENO1ENSG00000074800.930061.2650046050.69060-0.615307.771904.91310K562TRNAU1AP
ACTR6ENSG00000075089.5351.90260600.95440-0.772105.967103.34570K562TRNAU1AP
ADD2ENSG00000075340.185239.580803701.116500.501404.621902.30950K562TRNAU1AP
MCAMENSG00000076706.101096.309101840.94290-0.747808.275005.32900K562TRNAU1AP
PLOD1ENSG00000083444.122835.624303993.88310-0.494104.548702.26130K562TRNAU1AP
CADENSG00000084774.93175.238504476.97520-0.495704.834602.42560K562TRNAU1AP
FTLENSG00000087086.940173.2428057769.05930-0.524106.329103.65930K562TRNAU1AP
CPXM1ENSG00000088882.7168.5523088.462600.930004.016401.86700K562TRNAU1AP
MYL6ENSG00000092841.143152.630604964.20330-0.655006.281503.63170K562TRNAU1AP
LGALS1ENSG00000100097.7637.544101139.40150-0.837708.319205.35680K562TRNAU1AP
TTLL12ENSG00000100304.124491.812203422.773600.392003.374501.39160K562TRNAU1AP
RPL3ENSG00000100316.1121093.1559028381.30920-0.428203.848101.72850K562TRNAU1AP
FAM118AENSG00000100376.71372.726501979.03790-0.527804.647302.31920K562TRNAU1AP
PGK1ENSG00000102144.99493.8981013998.72990-0.560203.884301.75740K562TRNAU1AP
GABREENSG00000102287.123949.433805888.53790-0.576306.829504.07550K562TRNAU1AP
CALB1ENSG00000104327.3508.90780331.872700.616703.709601.63110K562TRNAU1AP
RPS16ENSG00000105193.46795.802009226.71200-0.441204.097401.92420K562TRNAU1AP
NUMBLENSG00000105245.5959.94380637.339500.590803.990801.84400K562TRNAU1AP
RPS19ENSG00000105372.24943.701107583.30580-0.617207.661304.83470K562TRNAU1AP
TMEM147ENSG00000105677.7449.37310712.21160-0.664404.619202.30950K562TRNAU1AP
LSRENSG00000105699.121130.09690803.603600.491803.985501.84120K562TRNAU1AP
ZC3HAV1ENSG00000105939.83133.391102243.276900.482004.067801.90270K562TRNAU1AP
CYP3A5ENSG00000106258.9123.6785061.380801.010603.652101.59490K562TRNAU1AP
TGFBR1ENSG00000106799.8619.19590874.33660-0.497803.214101.30210K562TRNAU1AP
PSMB3ENSG00000108294.41265.396701721.32520-0.443903.753401.66170K562TRNAU1AP
RPL19ENSG00000108298.512328.4620018218.21310-0.563406.465903.76980K562TRNAU1AP
NMUENSG00000109255.71206.709601920.84370-0.670703.770401.67630K562TRNAU1AP
SOD3ENSG00000109610.5130.8097065.157201.005403.636001.58290K562TRNAU1AP
STIM2ENSG00000109689.10352.48800213.271800.724803.796201.69300K562TRNAU1AP
KLF3ENSG00000109787.83182.144902143.117000.570203.740701.65560K562TRNAU1AP
IL10RAENSG00000110324.5167.84230309.17390-0.881304.483202.20980K562TRNAU1AP
CD81ENSG00000110651.71126.932901579.33930-0.486903.690601.62040K562TRNAU1AP
CORO1CENSG00000110880.63422.701104569.73050-0.417003.789601.69090K562TRNAU1AP
LDHBENSG00000111716.84753.544107239.83720-0.607005.753803.16880K562TRNAU1AP
ULBP1ENSG00000111981.4210.93480121.037000.801203.342801.37370K562TRNAU1AP
BAG2ENSG00000112208.101544.554701135.078700.444303.249301.32680K562TRNAU1AP
RPS12ENSG00000112306.77426.5890011877.27780-0.677408.693705.67810K562TRNAU1AP
COX7A2ENSG00000112695.7993.507001376.48950-0.470404.186901.97990K562TRNAU1AP
VEGFAENSG00000112715.165537.898408005.54170-0.531705.161802.70870K562TRNAU1AP
HSPA9ENSG00000113013.87694.2490010788.13990-0.487605.010502.57270K562TRNAU1AP
CPEB4ENSG00000113742.81533.41220958.760800.677403.525001.50180K562TRNAU1AP
EEF1B2ENSG00000114942.94658.271706506.09060-0.482004.769102.37850K562TRNAU1AP
FANCLENSG00000115392.7139.11810344.18020-1.306909.753006.60610K562TRNAU1AP
USP34ENSG00000115464.102283.393103010.84900-0.399003.272001.33540K562TRNAU1AP
SLC1A4ENSG00000115902.6859.17860593.257000.534203.605001.55600K562TRNAU1AP
RPL22ENSG00000116251.58645.6929013052.79170-0.594305.360202.85260K562TRNAU1AP
MAD2L2ENSG00000116670.10828.878701232.32600-0.572204.834402.42560K562TRNAU1AP
KIF21BENSG00000116852.10488.52320924.94600-0.920909.345606.25990K562TRNAU1AP
SDHBENSG00000117118.51836.984802527.14610-0.460203.859901.73780K562TRNAU1AP
ECE1ENSG00000117298.10761.876401059.10740-0.475203.320301.36630K562TRNAU1AP
GALEENSG00000117308.10364.01010692.37300-0.927608.557005.55990K562TRNAU1AP
PRDX1ENSG00000117450.94373.545905754.69100-0.395903.327401.37160K562TRNAU1AP
RPS6KA1ENSG00000117676.9688.49630990.54480-0.524804.114801.93200K562TRNAU1AP
VAMP8ENSG00000118640.6599.20340995.81030-0.732807.170804.39550K562TRNAU1AP
ELL2ENSG00000118985.101753.371901239.865600.499804.159701.96130K562TRNAU1AP
CCDC92ENSG00000119242.4197.58170112.802900.808503.696801.62050K562TRNAU1AP
TCTN3ENSG00000119977.16296.49080453.44220-0.612903.598901.55190K562TRNAU1AP
TNFRSF10BENSG00000120889.8653.893001071.69020-0.712805.898203.30620K562TRNAU1AP
SORBS3ENSG00000120896.9239.06720126.276000.920704.163501.96230K562TRNAU1AP
RPAP2ENSG00000122484.8101.02050376.33530-1.8974018.9225015.02230K562TRNAU1AP
SNRNP27ENSG00000124380.61043.63120731.539300.512503.512701.49520K562TRNAU1AP
RPS10ENSG00000124614.910421.8952015172.57420-0.541806.310903.64960K562TRNAU1AP
DEKENSG00000124795.106275.969204742.358800.404103.367801.38840K562TRNAU1AP
NDUFA1ENSG00000125356.61794.190702506.15520-0.482104.043001.88840K562TRNAU1AP
ERGIC3ENSG00000125991.141552.177702090.16790-0.429303.839301.72210K562TRNAU1AP
WNK4ENSG00000126562.121990.165501190.233800.741504.447202.18710K562TRNAU1AP
COX7CENSG00000127184.61304.117501897.67870-0.541203.363101.38720K562TRNAU1AP
AAMPENSG00000127837.5837.074901166.26100-0.478503.579601.54470K562TRNAU1AP
YWHAHENSG00000128245.103535.255902608.313200.438603.582601.54580K562TRNAU1AP
CDC42EP1ENSG00000128283.61887.59500921.806301.033906.276603.63170K562TRNAU1AP
CHAC1ENSG00000128965.7181.2203098.351500.881603.572501.54370K562TRNAU1AP
NEDD8ENSG00000129559.8711.78340996.84950-0.485903.335001.37330K562TRNAU1AP
STARD8ENSG00000130052.9740.937401115.14440-0.589804.677802.34190K562TRNAU1AP
LDLRENSG00000130164.72739.499203839.17660-0.486904.282502.05750K562TRNAU1AP
ASS1ENSG00000130707.1385.15120164.58280-0.950703.740801.65560K562TRNAU1AP
SLC6A8ENSG00000130821.115292.204507670.23040-0.535403.260601.33130K562TRNAU1AP
COX4I1ENSG00000131143.42730.019804149.74940-0.604106.545603.83110K562TRNAU1AP
SLC6A6ENSG00000131389.124469.564105706.10130-0.352403.277101.33600K562TRNAU1AP
PER2ENSG00000132326.7296.07350182.526900.697703.335501.37330K562TRNAU1AP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





55 RBPs can affect the gene expression of TRNAU1AP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRNAU1APENSG00000180098.5217.23010398.27490-0.874505.428504.71260HepG2AKAP1
TRNAU1APENSG00000180098.5153.43370308.04150-1.005509.919108.81720HepG2CKAP4
TRNAU1APENSG00000180098.5196.11200284.95090-0.539003.718902.77060HepG2DDX19B
TRNAU1APENSG00000180098.5210.83530381.52740-0.855705.781704.90820HepG2DDX3X
TRNAU1APENSG00000180098.5205.22240294.76840-0.522402.986902.28650HepG2DKC1
TRNAU1APENSG00000180098.5158.88490238.70710-0.587303.585302.86100HepG2DNAJC2
TRNAU1APENSG00000180098.5132.10450211.53180-0.679203.072401.90860HepG2EFTUD2
TRNAU1APENSG00000180098.5118.08800205.98910-0.802703.421102.42190HepG2EIF3D
TRNAU1APENSG00000180098.5238.66200348.19550-0.544902.548601.93410HepG2EIF4A3
TRNAU1APENSG00000180098.5310.26200459.67170-0.567103.661002.73160HepG2EIF4G2
TRNAU1APENSG00000180098.5185.08170301.07600-0.702004.506303.44600HepG2EWSR1
TRNAU1APENSG00000180098.5217.86380339.88370-0.641602.962001.80940HepG2GRSF1
TRNAU1APENSG00000180098.5136.09260243.17390-0.837404.582003.77860HepG2HNRNPA1
TRNAU1APENSG00000180098.5323.75760447.00850-0.465403.262002.25760HepG2HNRNPA2B1
TRNAU1APENSG00000180098.5218.06440329.94210-0.597503.091902.35500HepG2HNRNPK
TRNAU1APENSG00000180098.5147.51110268.68780-0.865106.905205.98560HepG2HNRNPU
TRNAU1APENSG00000180098.5192.12250331.25830-0.785904.924404.04650HepG2IGF2BP2
TRNAU1APENSG00000180098.5203.60240303.16720-0.574402.540001.74580HepG2LARP4
TRNAU1APENSG00000180098.5189.67420351.40230-0.889605.949804.99930HepG2MAGOH
TRNAU1APENSG00000180098.5232.06920353.37470-0.606602.950102.30150HepG2MATR3
TRNAU1APENSG00000180098.5149.32640216.46620-0.535702.188001.46310HepG2MSI2
TRNAU1APENSG00000180098.5226.73570335.61640-0.565802.109201.35020HepG2PABPC1
TRNAU1APENSG00000180098.5195.69150265.96850-0.442702.244501.47380HepG2PARN
TRNAU1APENSG00000180098.5245.48100339.00820-0.465702.805802.19600HepG2PCBP1
TRNAU1APENSG00000180098.5251.15600344.96840-0.457902.702002.16000HepG2PTBP1
TRNAU1APENSG00000180098.5270.41410460.40240-0.767706.476105.61550HepG2PUF60
TRNAU1APENSG00000180098.5303.04040488.73840-0.689608.024007.12320HepG2PUM1
TRNAU1APENSG00000180098.5380.76680488.38080-0.359102.095001.50630HepG2PUM2
TRNAU1APENSG00000180098.5216.38210313.81850-0.536303.588702.90590HepG2PUS1
TRNAU1APENSG00000180098.5264.90750373.57760-0.495902.893402.25760HepG2QKI
TRNAU1APENSG00000180098.584.00300200.44870-1.254708.098107.11100HepG2RPS19
TRNAU1APENSG00000180098.5233.03240368.87150-0.662603.404202.51680HepG2RPS3A
TRNAU1APENSG00000180098.5123.81720201.16210-0.700103.011002.02800HepG2SERBP1
TRNAU1APENSG00000180098.5232.14990359.13000-0.629404.391203.67250HepG2SF3B4
TRNAU1APENSG00000180098.5205.86260279.05720-0.438902.407401.80140HepG2SMN1
TRNAU1APENSG00000180098.5414.52690304.981900.442603.312002.71900HepG2SRSF9
TRNAU1APENSG00000180098.5337.86160516.98340-0.613706.229905.36460HepG2SUCLG1
TRNAU1APENSG00000180098.5174.85800333.68750-0.932303.886302.63510HepG2TBRG4
TRNAU1APENSG00000180098.5196.69300261.12100-0.408801.832901.40800HepG2TIAL1
TRNAU1APENSG00000180098.5197.88540263.41160-0.412702.146301.63720HepG2TRIM56
TRNAU1APENSG00000180098.5338.29420476.10210-0.493002.333101.56930HepG2UBE2L3
TRNAU1APENSG00000180098.5690.77830918.29620-0.410702.945402.34270K562AQR
TRNAU1APENSG00000180098.5702.17690559.190400.328402.790502.13560K562DDX47
TRNAU1APENSG00000180098.5693.65150836.30170-0.269802.061901.31760K562DKC1
TRNAU1APENSG00000180098.5292.90010497.53240-0.764406.210604.79540K562EFTUD2
TRNAU1APENSG00000180098.5322.16430532.68840-0.725505.058603.60810K562EIF3D
TRNAU1APENSG00000180098.5825.498101033.06680-0.323603.063902.07690K562EIF4G2
TRNAU1APENSG00000180098.5602.56710438.796200.457503.080502.18280K562FIP1L1
TRNAU1APENSG00000180098.5356.52070498.81140-0.484502.751801.33820K562GEMIN5
TRNAU1APENSG00000180098.5314.91950423.89250-0.428702.421501.36760K562HNRNPF
TRNAU1APENSG00000180098.5606.96360360.931600.749804.338403.15670K562HNRNPM
TRNAU1APENSG00000180098.5432.41290671.03890-0.634007.054505.62650K562HNRNPU
TRNAU1APENSG00000180098.5874.24840594.892900.555304.839503.79600K562HSPD1
TRNAU1APENSG00000180098.5641.65780510.865900.328802.797902.04760K562NSUN2
TRNAU1APENSG00000180098.5391.94470551.89960-0.493803.410602.32570K562PCBP2
TRNAU1APENSG00000180098.5771.908801061.51200-0.459604.068602.36120K562PNPT1
TRNAU1APENSG00000180098.5805.18590498.142700.692707.002105.58720K562PPIG
TRNAU1APENSG00000180098.5323.77030550.79950-0.766608.356406.82750K562SF3B4
TRNAU1APENSG00000180098.5196.65990396.81190-1.012805.510902.97870K562TRNAU1AP
TRNAU1APENSG00000180098.5417.63850530.25930-0.344402.134701.42960K562U2AF2
TRNAU1APENSG00000180098.5673.29020541.681000.313702.412901.74010K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRNAU1AP is not available on ENCORE database.





20 RBPs can affect the splicing of TRNAU1AP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRNAU1APENSG00000180098.5chr1+289011002890123028898378288984122890401128904287-0.315000.004620.07116excludedK562SRSF1
SETRNAU1APENSG00000180098.5chr1+288876242888777228887144288872442888785728887910-0.106000.000540.01211excludedHepG2U2AF1
SETRNAU1APENSG00000180098.5chr1+2890110028901230288983782889841228904011289042870.187000.002050.05460includedK562AKAP8L
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.069000.000070.04978includedK562UTP3
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.197000.004130.08308includedHepG2HNRNPK
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.122000.000040.00069includedK562AQR
SETRNAU1APENSG00000180098.5chr1+289011002890123028898378288984122890401128904287-0.504000.000500.02253excludedK562FXR1
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.115000.000060.02050includedK562HNRNPA1
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.089000.000000.00516includedK562EXOSC5
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.060000.000100.01141includedK562HNRNPL
SETRNAU1APENSG00000180098.5chr1+288876242888777228887144288872442888785728887910-0.173000.000490.07356excludedHepG2RBM15
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.054000.000220.05118includedK562SBDS
SETRNAU1APENSG00000180098.5chr1+288876242888777228887144288872442888785728887910-0.155000.000000.00001excludedHepG2SRSF1
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.191000.000100.04653includedHepG2BCCIP
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.059000.000480.07469includedK562UPF1
SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.085000.000190.01042includedK562HNRNPU
SETRNAU1APENSG00000180098.5chr1+2888737928887432288871442888724428887624288877720.309000.001320.03369includedK562RBM15
SETRNAU1APENSG00000180098.5chr1+2890110028901230288983782889841228904011289042870.178000.003290.05017includedK562HNRNPC
A3SSTRNAU1APENSG00000180098.5chr1+2888783428887910288878572888791028887144288872440.190000.000000.00000longerK562AQR
RITRNAU1APENSG00000180098.5chr1+288871442888791028887144288872442888785728887910-0.138000.000020.00904excludedHepG2ILF3
RITRNAU1APENSG00000180098.5chr1+2888714428887910288871442888724428887857288879100.058000.001840.07687includedHepG2HNRNPUL1
RITRNAU1APENSG00000180098.5chr1+2888714428887910288871442888724428887857288879100.081000.008880.07083includedHepG2TAF15
RITRNAU1APENSG00000180098.5chr1+2888714428887910288871442888724428887857288879100.062000.002440.04018includedHepG2FUBP3
RITRNAU1APENSG00000180098.5chr1+2888714428887910288871442888724428887857288879100.051000.000890.09885includedK562HNRNPA1
RITRNAU1APENSG00000180098.5chr1+2888714428887910288871442888724428887857288879100.196000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRNAU1AP is not avaliable on ENCORE database.