CORO1C

General Information

Gene Name : CORO1C
Gene ID : ENSG00000110880.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CORO1C)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CORO1C	ENSG00000110880.10	139.47	99.01	119.24	ENCSR000AEF
HepG2	CORO1C	ENSG00000110880.10	171.45	128.78	150.12	ENCSR985KAT
K562	CORO1C	ENSG00000110880.10	102.25	107.05	104.65	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CORO1C is not avaliable on ENCORE database.

Proteins bound to RNA

CORO1C RNA is bound by 54 proteins.

CanvasJS.com

eCLIP assay for CORO1C is not avaliable on ENCORE database.

54 proteins are bound to CORO1C RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	109039307	109039397	-	3'-UTR,intron-Distal	6.31651	400.00000	K562	UPF1
chr12	109039452	109039525	-	3'-UTR,intron-Distal	4.95630	57.46401	K562	UPF1
chr12	109039565	109039641	-	3'-UTR,intron-Distal	4.36521	43.95679	K562	UPF1
chr12	109039525	109039565	-	3'-UTR,intron-Distal	4.53313	41.55697	K562	UPF1
chr12	109038973	109039010	-	3'-UTR,intron-Distal	3.31126	40.29348	K562	UPF1
chr12	109039397	109039452	-	3'-UTR,intron-Distal	5.79516	39.48964	K562	UPF1
chr12	109038957	109038973	-	3'-UTR,intron-Distal	3.16947	36.42628	K562	UPF1
chr12	109125201	109125293	-	5'-UTR,intron-Distal	3.45521	35.20797	K562	DDX3X
chr12	109124588	109124727	-	5'-UTR,intron-Distal,intron-Proximal	5.21040	35.07525	HepG2	FAM120A
chr12	109124245	109124420	-	5'-UTR,intron-Distal,intron-Proximal	6.05165	34.50261	K562	EWSR1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 224 entries

eCLIP assay for CORO1C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CORO1C is not available on ENCORE database.
110 RBPs can affect the levels of CORO1C.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CORO1C is not available on ENCORE database.

110 RBPs can affect the gene expression of CORO1C :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CORO1C	ENSG00000110880.6	1245.04840	3314.10000	-1.41240	56.43250	54.71650	HepG2	TIAL1
CORO1C	ENSG00000110880.6	926.66470	2982.87600	-1.68660	52.43390	50.03790	HepG2	TARDBP
CORO1C	ENSG00000110880.6	1616.92820	3410.42970	-1.07670	51.42920	49.08690	HepG2	HNRNPU
CORO1C	ENSG00000110880.6	5846.06890	3450.26490	0.76070	36.24410	34.65450	HepG2	ACO1
CORO1C	ENSG00000110880.6	1527.52620	3041.84150	-0.99370	33.86500	31.54370	HepG2	PPIL4
CORO1C	ENSG00000110880.6	1475.88280	3433.12290	-1.21790	33.06290	30.97710	HepG2	HNRNPC
CORO1C	ENSG00000110880.6	2216.29700	4396.21830	-0.98810	26.74560	24.96800	K562	HNRNPC
CORO1C	ENSG00000110880.6	3462.32390	5404.87810	-0.64250	22.12370	20.70220	HepG2	ETF1
CORO1C	ENSG00000110880.6	1955.13520	3037.17460	-0.63550	21.32250	19.77510	HepG2	SAFB2
CORO1C	ENSG00000110880.6	5118.95410	9530.94830	-0.89680	20.68940	19.25870	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 127 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CORO1C is not available on ENCORE database.

6 RBPs can affect the splicing of CORO1C :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CORO1C	ENSG00000110880.6	chr12	-	109051079	109051199			109048081	109048186	109052513	109052695	-0.08700	0.00000	0.00000	excluded	HepG2	U2AF1
A3SS	CORO1C	ENSG00000110880.6	chr12	-	109042547	109042796			109042547	109042626	109046047	109046221	-0.07300	0.00000	0.00000	shorter	K562	AQR
RI	CORO1C	ENSG00000110880.6	chr12	-	109042547	109042742			109042547	109042626	109042738	109042742	0.11900	0.00000	0.00000	included	K562	U2AF2
SE	CORO1C	ENSG00000110880.6	chr12	-	109042738	109042796			109042380	109042626	109046047	109046193	-0.06600	0.00020	0.00525	excluded	K562	U2AF2
MXE	CORO1C	ENSG00000110880.6	chr12	-	109048081	109048186	109052513	109052695	109046047	109046193	109055804	109055934	-0.17400	0.00023	0.00869	2included	K562	HNRNPUL1
MXE	CORO1C	ENSG00000110880.6	chr12	-	109048081	109048186	109051079	109051199	109046047	109046193	109052513	109052695	-0.12000	0.00077	0.02834	2included	K562	SBDS
A3SS	CORO1C	ENSG00000110880.6	chr12	-	109042547	109042796			109042547	109042626	109046047	109046193	-0.09100	0.00083	0.03245	shorter	K562	U2AF2
MXE	CORO1C	ENSG00000110880.6	chr12	-	109048081	109048186	109052513	109052695	109046047	109046193	109055804	109055934	-0.13200	0.00182	0.02763	2included	K562	DROSHA
MXE	CORO1C	ENSG00000110880.6	chr12	-	109055804	109055934	109072047	109072170	109052513	109052695	109094899	109095099	0.12600	0.00511	0.05548	1included	K562	DROSHA

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CORO1C

General Information

Functions

Localization

Domains (AlphaFold: CORO1C)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CORO1C is not avaliable on ENCORE database.

54 proteins are bound to CORO1C RNA:

eCLIP assay for CORO1C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CORO1C is not available on ENCORE database.

110 RBPs can affect the gene expression of CORO1C :

The Knockdown/knockout RNA-Seq assay for CORO1C is not available on ENCORE database.

6 RBPs can affect the splicing of CORO1C :

The Knockdown/knockout RNA-Seq assay for CORO1C is not avaliable on ENCORE database.