RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|---|---|---|---|---|---|---|
MSI2 | Product_ID: GTX117808 Lot_ID: 40415 Source: GeneTex Target Name: MSI2-human | ![]() | ![]() | ![]() |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr17 | 55726858 | 55727001 | + | intron-Distal | 9.46818 | 151.02033 | K562 | AGGF1 |
chr17 | 55334082 | 55334131 | + | 5'-UTR,CDS,intron-Distal | 5.15448 | 83.03773 | HepG2 | PRPF4 |
chr17 | 55726917 | 55727010 | + | intron-Distal | 7.40073 | 82.84987 | HepG2 | HNRNPL |
chr17 | 55757038 | 55757142 | + | 3'-UTR | 5.37880 | 76.02705 | K562 | PUM2 |
chr17 | 55419217 | 55419337 | + | intron-Distal | 6.18385 | 74.39860 | HepG2 | PTBP1 |
chr17 | 55334090 | 55334161 | + | 5'-UTR,CDS,intron-Distal | 5.13080 | 71.47481 | K562 | DDX24 |
chr17 | 55347244 | 55347320 | + | intron-Distal | 5.89855 | 62.24936 | HepG2 | HNRNPM |
chr17 | 55334090 | 55334164 | + | 5'-UTR,CDS,intron-Distal | 5.54510 | 56.93712 | HepG2 | GTF2F1 |
chr17 | 55726830 | 55726917 | + | intron-Distal | 6.16834 | 51.55194 | HepG2 | HNRNPL |
chr17 | 55726878 | 55727004 | + | intron-Distal | 6.49381 | 49.63279 | HepG2 | XPO5 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
ITGA3 | ENSG00000005884.13 | 3159.52340 | 87.47150 | 5.17470 | 185.69240 | 181.62150 | HepG2 | MSI2 | |
GDE1 | ENSG00000006007.7 | 4118.31030 | 1603.87560 | 1.36040 | 46.16560 | 43.59300 | HepG2 | MSI2 | |
PROM1 | ENSG00000007062.7 | 1090.52960 | 448.68370 | 1.28120 | 25.44140 | 23.35950 | HepG2 | MSI2 | |
ANLN | ENSG00000011426.6 | 1290.64550 | 2928.33980 | -1.18200 | 24.97530 | 22.90440 | HepG2 | MSI2 | |
NFIX | ENSG00000008441.12 | 320.09580 | 806.59080 | -1.33330 | 23.30930 | 21.27970 | HepG2 | MSI2 | |
RHOBTB2 | ENSG00000008853.12 | 866.46670 | 365.06700 | 1.24690 | 20.55480 | 18.62380 | HepG2 | MSI2 | |
FKBP4 | ENSG00000004478.5 | 816.52930 | 1612.20590 | -0.98150 | 19.16860 | 17.28520 | HepG2 | MSI2 | |
IDS | ENSG00000010404.13 | 1720.16340 | 895.34720 | 0.94190 | 17.96730 | 16.12300 | HepG2 | MSI2 | |
ASB4 | ENSG00000005981.8 | 257.88380 | 66.15680 | 1.96270 | 17.27010 | 15.45810 | HepG2 | MSI2 | |
KDM1A | ENSG00000004487.11 | 1889.67260 | 3100.61200 | -0.71440 | 13.03750 | 11.41920 | HepG2 | MSI2 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
MSI2 | ENSG00000153944.6 | 2432.33460 | 4913.83090 | -1.01450 | 53.82170 | 52.26290 | HepG2 | SSB | |
MSI2 | ENSG00000153944.6 | 1318.15960 | 3915.92110 | -1.57080 | 51.74210 | 47.92220 | K562 | MSI2 | |
MSI2 | ENSG00000153944.6 | 1198.39340 | 3282.87990 | -1.45390 | 40.72900 | 38.25460 | HepG2 | MSI2 | |
MSI2 | ENSG00000153944.6 | 2556.90640 | 3987.30940 | -0.64100 | 28.91020 | 27.19360 | HepG2 | SMN1 | |
MSI2 | ENSG00000153944.6 | 1850.08030 | 3424.36080 | -0.88820 | 28.65300 | 26.49020 | HepG2 | PPIL4 | |
MSI2 | ENSG00000153944.6 | 2323.58420 | 4642.86120 | -0.99870 | 26.23570 | 24.65170 | HepG2 | PUF60 | |
MSI2 | ENSG00000153944.6 | 2334.70720 | 3742.45450 | -0.68070 | 25.42480 | 23.90610 | HepG2 | PUS1 | |
MSI2 | ENSG00000153944.6 | 1957.73240 | 3441.68190 | -0.81390 | 25.14590 | 23.26030 | HepG2 | DNAJC21 | |
MSI2 | ENSG00000153944.6 | 2068.96050 | 3730.81810 | -0.85060 | 23.02730 | 21.84670 | HepG2 | TIAL1 | |
MSI2 | ENSG00000153944.6 | 2277.02850 | 3411.11490 | -0.58310 | 21.03750 | 19.39450 | HepG2 | DNAJC2 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | 0.17500 | 0.00000 | 0.00001 | included | HepG2 | G3BP1 | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | -0.25300 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF1 | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | -0.26100 | 0.00000 | 0.00010 | excluded | K562 | AKAP8L | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | 0.08000 | 0.00000 | 0.00157 | included | HepG2 | HNRNPM | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | 0.13500 | 0.00000 | 0.00001 | included | HepG2 | QKI | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55334826 | 55334908 | 55334402 | 55334499 | 55335630 | 55335715 | -0.09800 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF2 | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | 0.34500 | 0.00000 | 0.00017 | included | K562 | FXR1 | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | -0.10300 | 0.00000 | 0.00047 | excluded | HepG2 | LARP4 | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | -0.37300 | 0.00000 | 0.00002 | excluded | K562 | RBM15 | |||
SE | MSI2 | ENSG00000153944.6 | chr17 | + | 55754347 | 55754420 | 55752332 | 55752487 | 55756909 | 55762046 | -0.31900 | 0.00000 | 0.00000 | excluded | K562 | AGGF1 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".