MSI2

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MSI2	ENSG00000153944.10	55.55	41.78	48.66	ENCSR000AEF
HepG2	MSI2	ENSG00000153944.10	64.07	82.04	73.06	ENCSR985KAT
K562	MSI2	ENSG00000153944.10	48.14	37.85	43.00	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	MSI2-BGKLV25-K562	ENCSR169QQW	MSI2	K562	Released		ENCSR620PUP	shRNA	KD% = 82.0,90.9
knockdown followed by RNA-seq	MSI2-BGHLV30-HepG2	ENCSR896MMU	MSI2	HepG2	Released		ENCSR067GHD	shRNA	KD% = 68.1,73.6

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
MSI2	ENCAB529VOS	GTX117808	40415			Released, ENCODE3	BGHLV30-43, Released, ENCODE3	BGKLV25-33, Released, ENCODE3

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
MSI2	K562	shRNA	ENCSR169QQW	ENCSR620PUP	MSI2_BGKLV25-33,MSI2_BGKLV25-34	NT_BGKLV25-1,NT_BGKLV25-2	82.0,90.9	Released	ENCODE3
MSI2	HepG2	shRNA			BGHLV27-35,BGHLV27-36	BGHLV27-1,BGHLV27-2		NotSatisfied	ENCODE3
MSI2	HepG2	shRNA	ENCSR896MMU	ENCSR067GHD	MSI2_BGHLV30-43,MSI2_BGHLV30-44	NT_BGHLV30-1,NT_BGHLV30-2	68.1,73.6	Released	ENCODE3

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MSI2 is not avaliable on ENCORE database.

Proteins bound to RNA

MSI2 RNA is bound by 65 proteins.

eCLIP assay for MSI2 is not avaliable on ENCORE database.

65 proteins are bound to MSI2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	55760532	55760580	+	3'-UTR	3.36703	6.18673	K562	UPF1
chr17	55757146	55757205	+	3'-UTR	3.24405	5.41577	K562	TIA1
chr17	55760149	55760174	+	3'-UTR	3.38340	12.75252	K562	YBX3
chr17	55759833	55759855	+	3'-UTR	3.37149	7.26174	K562	FAM120A
chr17	55757138	55757227	+	3'-UTR	4.01363	7.25636	HepG2	TIAL1
chr17	55760758	55760836	+	3'-UTR	3.57752	23.31962	K562	FAM120A
chr17	55760476	55760503	+	3'-UTR	3.76056	14.77879	K562	UPF1
chr17	55761455	55761509	+	3'-UTR	3.27175	10.43602	K562	FAM120A
chr17	55761553	55761577	+	3'-UTR	3.34667	5.33418	K562	FAM120A
chr17	55760537	55760573	+	3'-UTR	3.87506	10.76856	K562	FAM120A
chr17	55759841	55759871	+	3'-UTR	3.52111	11.51707	K562	UPF1
chr17	55759768	55759809	+	3'-UTR	5.91385	11.21630	K562	UPF1
chr17	55754390	55754421	+	3'-UTR,intron-Proximal	3.62330	4.69671	HepG2	PPIG
chr17	55757038	55757142	+	3'-UTR	5.37880	76.02705	K562	PUM2
chr17	55761958	55762001	+	3'-UTR	5.38342	6.88671	K562	FAM120A
chr17	55760673	55760687	+	3'-UTR	4.42324	7.50817	K562	UPF1
chr17	55760503	55760532	+	3'-UTR	3.59044	11.64749	K562	UPF1
chr17	55759871	55759916	+	3'-UTR	3.62548	10.16051	K562	UPF1
chr17	55757590	55757616	+	3'-UTR	3.01516	5.47292	K562	FAM120A
chr17	55761865	55761917	+	3'-UTR	3.68543	8.52451	K562	UPF1
chr17	55758175	55758219	+	3'-UTR	4.78651	19.68150	K562	FAM120A
chr17	55760481	55760527	+	3'-UTR	4.63081	12.37152	K562	FAM120A
chr17	55761529	55761585	+	3'-UTR	4.37183	7.35577	K562	PUM2
chr17	55761832	55761923	+	3'-UTR	3.50616	13.58833	K562	FAM120A
chr17	55759607	55759634	+	3'-UTR	4.93783	11.46884	K562	FAM120A
chr17	55758219	55758296	+	3'-UTR	3.80481	20.18766	K562	FAM120A
chr17	55761961	55761994	+	3'-UTR	4.55673	4.90799	K562	UPF1
chr17	55757143	55757196	+	3'-UTR	4.08339	7.38479	HepG2	TIA1
chr17	55761712	55761724	+	3'-UTR	3.42329	3.68882	K562	FAM120A
chr17	55754414	55754513	+	3'-UTR,intron-Proximal	5.20076	4.97857	HepG2	AQR
chr17	55757199	55757248	+	3'-UTR	4.10902	5.05351	HepG2	FUBP3
chr17	55761051	55761098	+	3'-UTR	3.18989	8.53557	K562	FAM120A
chr17	55760688	55760708	+	3'-UTR	3.38700	7.50480	K562	FAM120A
chr17	55756852	55756934	+	3'-UTR,intron-Proximal	3.51145	12.62051	HepG2	U2AF2
chr17	55759354	55759398	+	3'-UTR	3.79903	12.97302	K562	PUM2
chr17	55760687	55760733	+	3'-UTR	3.98073	12.78813	K562	UPF1
chr17	55761447	55761518	+	3'-UTR	3.01018	6.16228	K562	UPF1
chr17	55759253	55759337	+	3'-UTR	3.25491	9.06096	HepG2	PCBP2
chr17	55760664	55760749	+	3'-UTR	4.33866	3.24831	HepG2	TIA1
chr17	55760141	55760149	+	3'-UTR	3.19366	9.28412	K562	YBX3
chr17	55759855	55759928	+	3'-UTR	4.81184	24.94405	K562	FAM120A
chr17	55758850	55758955	+	3'-UTR	3.14829	21.12493	HepG2	QKI
chr17	55754400	55754489	+	3'-UTR,intron-Proximal	3.46928	10.11149	HepG2	PRPF8
chr17	55754419	55754486	+	3'-UTR,intron-Proximal	3.99644	10.89589	K562	AQR
chr17	55760024	55760119	+	3'-UTR	3.50289	20.44801	K562	FAM120A
chr17	55761824	55761878	+	3'-UTR	4.06696	3.98488	K562	TIA1
chr17	55757324	55757395	+	3'-UTR	4.87687	16.22035	K562	TIA1
chr17	55334458	55334465	+	5'-UTR,CDS,intron-Proximal	3.62370	3.93290	HepG2	FAM120A
chr17	55334092	55334156	+	5'-UTR,CDS,intron-Distal	3.64390	15.91589	K562	FAM120A
chr17	55334090	55334164	+	5'-UTR,CDS,intron-Distal	5.54510	56.93712	HepG2	GTF2F1
chr17	55333986	55334053	+	5'-UTR,intron-Distal	4.96305	34.42814	HepG2	PRPF4
chr17	55333992	55334053	+	5'-UTR,intron-Distal	4.03584	14.30856	HepG2	GTF2F1
chr17	55333992	55334059	+	5'-UTR,intron-Distal	4.23095	13.07890	HepG2	NCBP2
chr17	55334077	55334164	+	5'-UTR,CDS,intron-Distal	4.20594	39.47410	HepG2	PCBP2
chr17	55333879	55333924	+	5'-UTR,intron-Distal	3.15192	3.14650	K562	TIA1
chr17	55333887	55333942	+	5'-UTR,intron-Distal	3.62246	7.42472	HepG2	NCBP2
chr17	55333868	55333936	+	5'-UTR,intron-Distal	5.32252	24.95707	HepG2	FAM120A
chr17	55333864	55333898	+	5'-UTR,intron-Distal	5.95331	32.93031	HepG2	PRPF4
chr17	55333992	55334047	+	5'-UTR,intron-Distal	3.44392	10.64459	HepG2	FAM120A
chr17	55333877	55333921	+	5'-UTR,intron-Distal	6.09920	11.07690	K562	FASTKD2
chr17	55334091	55334163	+	5'-UTR,CDS,intron-Distal	5.77571	49.50931	K562	GTF2F1
chr17	55334000	55334055	+	5'-UTR,intron-Distal	5.21012	14.13943	K562	GTF2F1
chr17	55333872	55333927	+	5'-UTR,intron-Distal	4.25148	13.70835	K562	CSTF2T
chr17	55333866	55333940	+	5'-UTR,intron-Distal	3.70497	4.48686	HepG2	DROSHA
chr17	55339520	55339567	+	5'-UTR,CDS,intron-Proximal	3.02423	14.95016	HepG2	PPIG
chr17	55333879	55333927	+	5'-UTR,intron-Distal	4.52279	8.98738	K562	FAM120A
chr17	55334082	55334131	+	5'-UTR,CDS,intron-Distal	5.15448	83.03773	HepG2	PRPF4
chr17	55333873	55333948	+	5'-UTR,intron-Distal	3.16588	4.23490	HepG2	NKRF
chr17	55333866	55333932	+	5'-UTR,intron-Distal	3.68623	6.19545	HepG2	PCBP2
chr17	55334091	55334163	+	5'-UTR,CDS,intron-Distal	3.76499	6.48535	HepG2	SUB1
chr17	55333898	55333924	+	5'-UTR,intron-Distal	5.19020	37.63284	HepG2	PRPF4
chr17	55333873	55333935	+	5'-UTR,intron-Distal	7.21507	37.27065	K562	GTF2F1
chr17	55339511	55339525	+	5'-UTR,CDS,intron-Proximal	3.10551	9.72191	K562	DDX24
chr17	55339525	55339554	+	5'-UTR,CDS,intron-Proximal	3.25379	11.40969	K562	DDX24
chr17	55334090	55334161	+	5'-UTR,CDS,intron-Distal	5.13080	71.47481	K562	DDX24
chr17	55333896	55333954	+	5'-UTR,intron-Distal	4.55871	8.90399	HepG2	DDX3X
chr17	55339461	55339563	+	5'-UTR,CDS,intron-Proximal	3.29704	7.83986	K562	SF3B4
chr17	55334090	55334165	+	5'-UTR,CDS,intron-Distal	3.07355	31.84738	HepG2	PPIG
chr17	55333875	55333922	+	5'-UTR,intron-Distal	5.07493	16.91123	HepG2	GTF2F1
chr17	55334091	55334161	+	5'-UTR,CDS,intron-Distal	3.52891	10.44255	K562	NCBP2
chr17	55333924	55333955	+	5'-UTR,intron-Distal	4.57616	16.58576	HepG2	PRPF4
chr17	55334091	55334162	+	5'-UTR,CDS,intron-Distal	4.97700	28.95733	HepG2	NCBP2
chr17	55333867	55333948	+	5'-UTR,intron-Distal	3.52889	13.59467	HepG2	CSTF2T
chr17	55334086	55334158	+	5'-UTR,CDS,intron-Distal	3.46841	9.28987	K562	ZNF622
chr17	55334826	55334847	+	CDS,intron-Proximal	5.09316	6.93329	K562	DDX24
chr17	55478802	55478873	+	CDS,intron-Proximal	3.44638	6.98138	HepG2	PRPF8
chr17	55752320	55752365	+	CDS,intron-Proximal	4.98196	3.02297	K562	DDX24
chr17	55335611	55335690	+	CDS,intron-Proximal	3.32277	3.76069	K562	U2AF1
chr17	55704588	55704677	+	CDS,intron-Proximal	4.00760	7.43070	K562	DDX24
chr17	55704585	55704706	+	CDS,intron-Proximal	3.67022	11.40182	HepG2	PRPF8
chr17	55478820	55478837	+	CDS,intron-Proximal	4.83689	25.30523	HepG2	PPIG
chr17	55729457	55729536	+	CDS,intron-Proximal	3.05998	21.46533	HepG2	PPIG
chr17	55704530	55704598	+	CDS,intron-Proximal	4.50342	6.25632	HepG2	SF3A3
chr17	55335665	55335717	+	CDS,intron-Proximal	3.06823	9.64220	K562	DDX24
chr17	55693411	55693446	+	CDS,intron-Proximal	3.55106	3.11409	K562	DDX24
chr17	55334774	55334850	+	CDS,intron-Proximal	3.47517	5.05651	K562	U2AF2
chr17	55334131	55334137	+	CDS,intron-Distal	4.49377	30.26306	HepG2	PRPF4
chr17	55693420	55693492	+	CDS,intron-Proximal	4.42567	22.91693	HepG2	PRPF8
chr17	55693328	55693411	+	CDS,intron-Proximal	4.29975	7.88406	K562	DDX24
chr17	55693335	55693418	+	CDS	3.66068	11.35339	HepG2	PPIG
chr17	55478744	55478813	+	CDS	3.48902	4.43122	HepG2	SUB1
chr17	55674225	55674249	+	CDS,intron-Proximal	4.62306	11.55759	HepG2	BCLAF1
chr17	55509922	55510061	+	CDS,intron-Distal,intron-Proximal	4.55569	9.06568	HepG2	MATR3
chr17	55478755	55478834	+	CDS,intron-Proximal	4.41919	29.69832	K562	DDX24
chr17	55478739	55478755	+	CDS,intron-Proximal	3.70980	7.99428	K562	DDX24
chr17	55752373	55752465	+	CDS	4.32953	8.51520	K562	DDX24
chr17	55752477	55752537	+	CDS,intron-Proximal	3.38443	3.47285	K562	PRPF8
chr17	55729459	55729520	+	CDS,intron-Proximal	4.62358	9.64961	K562	DDX24
chr17	55607036	55607065	+	CDS,intron-Distal,intron-Proximal	4.34741	18.79097	HepG2	PPIG
chr17	55478756	55478820	+	CDS	3.68825	25.90879	HepG2	PPIG
chr17	55752353	55752437	+	CDS	3.06544	10.11156	HepG2	PPIG
chr17	55752459	55752534	+	CDS,intron-Proximal	4.88179	23.17896	HepG2	PRPF8
chr17	55478815	55478833	+	CDS,intron-Proximal	3.44729	14.17692	HepG2	BCLAF1
chr17	55693416	55693458	+	CDS,intron-Proximal	3.19183	5.29017	HepG2	BCLAF1
chr17	55478755	55478805	+	CDS	3.42116	21.38673	HepG2	BCLAF1
chr17	55607053	55607087	+	CDS,intron-Distal,intron-Proximal	4.30535	16.23904	HepG2	BCLAF1
chr17	55704629	55704668	+	CDS,intron-Proximal	3.08810	4.45614	HepG2	PRPF4
chr17	55729376	55729561	+	CDS,intron-Proximal	3.22627	7.41781	HepG2	AQR
chr17	55607052	55607088	+	CDS,intron-Distal,intron-Proximal	3.87961	6.67395	K562	DDX24
chr17	55752454	55752582	+	CDS,intron-Proximal	3.18826	8.18757	HepG2	EFTUD2
chr17	55334137	55334162	+	CDS,intron-Distal	6.27815	45.88843	HepG2	PRPF4
chr17	55693326	55693416	+	CDS,intron-Proximal	3.62788	18.49416	HepG2	BCLAF1
chr17	55729458	55729475	+	CDS,intron-Proximal	3.38345	4.06531	HepG2	GRWD1
chr17	55674228	55674321	+	CDS,intron-Proximal	4.23284	15.78065	K562	DDX24
chr17	55335668	55335716	+	CDS,intron-Proximal	3.07715	19.12315	HepG2	PPIG
chr17	55335606	55335671	+	CDS,intron-Proximal	3.96059	8.35613	K562	U2AF2
chr17	55607034	55607053	+	CDS,intron-Distal,intron-Proximal	3.33504	9.12012	HepG2	BCLAF1
chr17	55334163	55334206	+	CDS,intron-Distal,intron-Proximal	4.54429	3.95187	HepG2	AQR
chr17	55607065	55607104	+	CDS,intron-Distal,intron-Proximal	3.38264	9.76148	HepG2	PPIG
chr17	55674249	55674313	+	CDS,intron-Proximal	4.26662	20.75818	HepG2	BCLAF1
chr17	55674224	55674305	+	CDS,intron-Proximal	3.60409	20.14386	HepG2	PPIG
chr17	55607035	55607052	+	CDS,intron-Distal,intron-Proximal	3.49332	3.90681	K562	DDX24
chr17	55334465	55334499	+	CDS	6.36321	10.74798	K562	DDX24
chr17	55704529	55704596	+	CDS,intron-Proximal	4.76536	7.56947	K562	SF3B4
chr17	55511864	55511958	+	intron-Distal	3.82880	6.59715	HepG2	HNRNPK
chr17	55416892	55416954	+	intron-Distal	4.37324	10.82628	HepG2	XPO5
chr17	55366110	55366142	+	intron-Distal	5.08714	5.94008	HepG2	HNRNPM
chr17	55388378	55388415	+	intron-Distal	3.25457	3.66782	HepG2	HNRNPM
chr17	55566702	55566793	+	intron-Distal	4.23070	3.90256	HepG2	PRPF4
chr17	55405681	55405769	+	intron-Distal	4.13817	5.26540	HepG2	GTF2F1
chr17	55366174	55366231	+	intron-Distal	4.64870	6.66631	HepG2	HNRNPM
chr17	55343251	55343298	+	intron-Distal	4.75457	5.72853	HepG2	HNRNPM
chr17	55752606	55752685	+	intron-Distal	4.08231	4.19412	K562	EFTUD2
chr17	55513435	55513518	+	intron-Distal	3.23264	4.50064	HepG2	SFPQ
chr17	55347244	55347320	+	intron-Distal	5.89855	62.24936	HepG2	HNRNPM
chr17	55731062	55731161	+	intron-Distal	3.64181	10.10774	HepG2	QKI
chr17	55528618	55528680	+	intron-Distal	3.35980	4.38938	K562	TARDBP
chr17	55480635	55480711	+	intron-Distal	3.97483	13.10041	K562	PTBP1
chr17	55726290	55726402	+	intron-Distal	4.94624	19.32723	HepG2	AGGF1
chr17	55356368	55356421	+	intron-Distal	3.36413	5.70060	HepG2	HNRNPM
chr17	55370537	55370659	+	intron-Distal	3.58107	4.95862	HepG2	HNRNPU
chr17	55608346	55608419	+	intron-Distal	4.32095	4.12763	HepG2	TAF15
chr17	55420519	55420602	+	intron-Distal	4.39473	4.32882	HepG2	MATR3
chr17	55554542	55554623	+	intron-Distal	4.14690	3.91772	K562	TARDBP
chr17	55344812	55344892	+	intron-Distal	4.60214	17.74549	HepG2	HNRNPM
chr17	55365722	55365772	+	intron-Distal	4.37645	5.31171	K562	HNRNPM
chr17	55368484	55368565	+	intron-Distal	3.27608	3.54181	HepG2	SFPQ
chr17	55429556	55429646	+	intron-Distal	3.75113	5.28337	HepG2	HNRNPM
chr17	55507964	55508085	+	intron-Distal	3.58330	5.05511	HepG2	PTBP1
chr17	55539246	55539304	+	intron-Distal	4.16826	4.48652	HepG2	PTBP1
chr17	55479912	55479982	+	intron-Distal	3.08061	4.40150	HepG2	HNRNPM
chr17	55340091	55340131	+	intron-Distal	3.45519	8.02804	HepG2	HNRNPM
chr17	55624725	55624780	+	intron-Distal	3.22532	3.48223	HepG2	RBFOX2
chr17	55339765	55339839	+	intron-Distal	3.15572	4.03654	HepG2	SFPQ
chr17	55384479	55384552	+	intron-Distal	3.47553	8.55385	HepG2	QKI
chr17	55344577	55344618	+	intron-Distal	3.42942	9.23085	HepG2	SUGP2
chr17	55620078	55620157	+	intron-Distal	3.48783	3.12080	HepG2	XPO5
chr17	55753673	55753722	+	intron-Distal	3.20943	4.95192	HepG2	AGGF1
chr17	55405666	55405748	+	intron-Distal	4.95970	14.13145	K562	AGGF1
chr17	55364734	55364824	+	intron-Distal	4.31923	5.59287	HepG2	EXOSC5
chr17	55419243	55419330	+	intron-Distal	5.58733	30.27643	K562	PTBP1
chr17	55726861	55727008	+	intron-Distal	6.48184	20.45984	HepG2	GTF2F1
chr17	55358338	55358390	+	intron-Distal	3.78859	3.39169	HepG2	HNRNPU
chr17	55429876	55429930	+	intron-Distal	4.52302	3.18269	HepG2	XPO5
chr17	55351750	55351834	+	intron-Distal	3.02013	7.34194	HepG2	SFPQ
chr17	55755727	55755806	+	intron-Distal	4.23356	6.10779	K562	QKI
chr17	55608337	55608396	+	intron-Distal	3.40956	6.96229	HepG2	CSTF2T
chr17	55548827	55548885	+	intron-Distal	3.32449	4.48901	HepG2	HNRNPC
chr17	55368326	55368393	+	intron-Distal	3.37455	5.21690	HepG2	HNRNPM
chr17	55405689	55405825	+	intron-Distal	3.12687	3.84589	K562	HNRNPL
chr17	55511364	55511424	+	intron-Distal	3.66077	4.70126	HepG2	SFPQ
chr17	55523515	55523602	+	intron-Distal	4.57546	6.20421	HepG2	TAF15
chr17	55344091	55344124	+	intron-Distal	3.30966	3.42785	HepG2	HNRNPM
chr17	55347191	55347217	+	intron-Distal	4.30112	8.37039	HepG2	HNRNPM
chr17	55367192	55367250	+	intron-Distal	5.07769	7.51037	HepG2	HNRNPM
chr17	55626052	55626109	+	intron-Distal	4.22838	3.31153	K562	GTF2F1
chr17	55494497	55494550	+	intron-Distal	5.23054	6.88699	HepG2	XPO5
chr17	55608350	55608436	+	intron-Distal	4.08942	3.01994	HepG2	GTF2F1
chr17	55419249	55419324	+	intron-Distal	3.76729	3.06015	K562	MATR3
chr17	55479140	55479192	+	intron-Distal	4.32944	4.68986	HepG2	TAF15
chr17	55492993	55493058	+	intron-Distal	3.42354	3.37567	HepG2	HNRNPK
chr17	55726578	55726586	+	intron-Distal	5.66530	15.22109	HepG2	HNRNPL
chr17	55434128	55434226	+	intron-Distal	3.06856	4.68689	HepG2	SFPQ
chr17	55755730	55755840	+	intron-Distal	5.08226	34.01905	HepG2	QKI
chr17	55346677	55346742	+	intron-Distal	4.47245	5.09405	K562	NONO
chr17	55500749	55500774	+	intron-Distal	3.23348	3.59523	HepG2	SUGP2
chr17	55625982	55626120	+	intron-Distal	3.23296	3.68924	HepG2	PRPF4
chr17	55417439	55417528	+	intron-Distal	4.50682	8.08894	HepG2	QKI
chr17	55652504	55652568	+	intron-Distal	4.15828	3.65412	HepG2	HNRNPK
chr17	55417399	55417493	+	intron-Distal	3.27138	7.19888	HepG2	SFPQ
chr17	55726640	55726677	+	intron-Distal	4.93133	9.69696	HepG2	AGGF1
chr17	55442390	55442454	+	intron-Distal	3.82939	4.13307	HepG2	CSTF2
chr17	55726301	55726386	+	intron-Distal	6.44639	42.33522	K562	AGGF1
chr17	55731081	55731132	+	intron-Distal	3.54746	5.11028	HepG2	PCBP2
chr17	55523509	55523567	+	intron-Distal	4.12389	3.57264	HepG2	GTF2F1
chr17	55344423	55344472	+	intron-Distal	3.49126	3.53619	HepG2	HNRNPM
chr17	55372455	55372498	+	intron-Distal	3.13441	3.53619	HepG2	HNRNPM
chr17	55479491	55479585	+	intron-Distal	3.70250	3.72682	HepG2	EIF3D
chr17	55437916	55437967	+	intron-Distal	5.04781	7.15660	HepG2	HNRNPM
chr17	55437744	55437843	+	intron-Distal	4.04705	5.95943	HepG2	HNRNPM
chr17	55511325	55511396	+	intron-Distal	3.56588	4.10408	K562	KHSRP
chr17	55365626	55365699	+	intron-Distal	5.31460	25.53826	HepG2	HNRNPM
chr17	55727059	55727177	+	intron-Distal	5.92580	16.23189	K562	HNRNPL
chr17	55373152	55373218	+	intron-Distal	3.90935	5.49084	HepG2	SFPQ
chr17	55334168	55334222	+	intron-Distal,intron-Proximal	5.30045	5.65342	K562	AQR
chr17	55377669	55377763	+	intron-Distal	3.87895	3.46942	K562	KHDRBS1
chr17	55356276	55356364	+	intron-Distal	4.56848	10.12287	HepG2	HNRNPM
chr17	55417828	55417891	+	intron-Distal	3.54037	3.84494	HepG2	QKI
chr17	55394523	55394590	+	intron-Distal	3.43447	3.73413	HepG2	RBFOX2
chr17	55489366	55489425	+	intron-Distal	3.84399	3.37208	HepG2	ILF3
chr17	55561409	55561542	+	intron-Distal	3.45149	7.30415	HepG2	MATR3
chr17	55432857	55432906	+	intron-Distal	4.24837	3.09122	HepG2	PTBP1
chr17	55372442	55372507	+	intron-Distal	4.46122	4.67899	HepG2	HNRNPUL1
chr17	55480629	55480740	+	intron-Distal	4.64248	22.70832	HepG2	PTBP1
chr17	55392789	55392870	+	intron-Distal	5.13817	9.02780	HepG2	GTF2F1
chr17	55564988	55565041	+	intron-Distal	3.64879	5.37374	HepG2	XPO5
chr17	55754670	55754719	+	intron-Distal	3.64075	3.10961	HepG2	MATR3
chr17	55726917	55727010	+	intron-Distal	7.40073	82.84987	HepG2	HNRNPL
chr17	55729635	55729715	+	intron-Distal	3.07551	7.08793	HepG2	PRPF4
chr17	55363459	55363508	+	intron-Distal,intron-Proximal	4.15205	7.88692	HepG2	PTBP1
chr17	55425458	55425543	+	intron-Distal	4.98872	8.39510	HepG2	SUGP2
chr17	55726677	55726730	+	intron-Distal	6.58390	18.19969	HepG2	AGGF1
chr17	55535122	55535186	+	intron-Distal	3.16060	3.02632	HepG2	ILF3
chr17	55726487	55726545	+	intron-Distal	5.51913	27.87117	HepG2	HNRNPL
chr17	55456854	55456896	+	intron-Distal	3.50048	3.34056	HepG2	MATR3
chr17	55358344	55358437	+	intron-Distal	5.53899	20.27444	HepG2	HNRNPM
chr17	55726818	55726973	+	intron-Distal	5.04991	17.11022	K562	AKAP8L
chr17	55435207	55435251	+	intron-Distal	3.85622	9.16997	HepG2	HNRNPM
chr17	55368466	55368560	+	intron-Distal	3.71938	8.25342	HepG2	HNRNPM
chr17	55517811	55517897	+	intron-Distal	3.71565	4.82429	K562	TARDBP
chr17	55633221	55633268	+	intron-Distal	4.14070	3.31570	HepG2	HNRNPK
chr17	55359558	55359626	+	intron-Distal	3.47967	4.57394	K562	HNRNPM
chr17	55425694	55425762	+	intron-Distal	5.16987	9.59838	HepG2	SUGP2
chr17	55693453	55693581	+	intron-Distal,intron-Proximal	3.96906	6.37709	K562	EFTUD2
chr17	55341495	55341558	+	intron-Distal	4.31260	26.50383	HepG2	HNRNPM
chr17	55375424	55375481	+	intron-Distal	3.57812	4.10380	HepG2	MATR3
chr17	55421547	55421605	+	intron-Distal	3.20536	4.86332	HepG2	SUGP2
chr17	55481286	55481387	+	intron-Distal	3.97593	13.08592	K562	AGGF1
chr17	55566710	55566836	+	intron-Distal	3.19970	4.35338	HepG2	HNRNPU
chr17	55708452	55708526	+	intron-Distal	4.20483	4.36307	HepG2	HNRNPK
chr17	55341510	55341580	+	intron-Distal	3.08948	5.55379	HepG2	MATR3
chr17	55733550	55733624	+	intron-Distal	3.74383	3.06084	HepG2	HNRNPK
chr17	55455483	55455541	+	intron-Distal	3.09557	3.63916	HepG2	HNRNPC
chr17	55395986	55396081	+	intron-Distal	4.31901	5.35750	HepG2	FUS
chr17	55726878	55727004	+	intron-Distal	6.49381	49.63279	HepG2	XPO5
chr17	55340131	55340164	+	intron-Distal	4.20419	7.32988	HepG2	HNRNPM
chr17	55484925	55484962	+	intron-Distal	3.41048	4.14896	HepG2	HNRNPM
chr17	55753667	55753729	+	intron-Distal	4.07770	11.10471	K562	AGGF1
chr17	55397826	55397876	+	intron-Distal	4.31319	3.47667	HepG2	HNRNPUL1
chr17	55726578	55726629	+	intron-Distal	4.62623	5.41154	K562	HNRNPL
chr17	55554540	55554611	+	intron-Distal	5.71597	16.78191	K562	EIF4G2
chr17	55417338	55417399	+	intron-Distal	5.23605	16.70722	HepG2	SFPQ
chr17	55392771	55392864	+	intron-Distal	4.35990	4.06667	K562	GTF2F1
chr17	55722043	55722105	+	intron-Distal	3.08257	3.23179	HepG2	RBFOX2
chr17	55429768	55429850	+	intron-Distal	3.78652	5.79523	HepG2	SUGP2
chr17	55365716	55365759	+	intron-Distal	4.38989	15.96166	HepG2	HNRNPM
chr17	55425797	55425857	+	intron-Distal	4.64374	4.87593	HepG2	MATR3
chr17	55517801	55517870	+	intron-Distal	4.61502	6.14341	HepG2	IGF2BP1
chr17	55358459	55358494	+	intron-Distal	3.91048	6.64193	HepG2	HNRNPM
chr17	55550046	55550190	+	intron-Distal	4.38867	5.19780	K562	NONO
chr17	55726442	55726487	+	intron-Distal	3.90379	14.10229	HepG2	AGGF1
chr17	55365227	55365288	+	intron-Distal	4.42593	7.84106	HepG2	EXOSC5
chr17	55357956	55358025	+	intron-Distal	3.70296	7.94840	HepG2	HNRNPM
chr17	55566714	55566836	+	intron-Distal	3.71378	3.05155	HepG2	TAF15
chr17	55425764	55425849	+	intron-Distal	3.62954	8.37901	HepG2	SUGP2
chr17	55526078	55526156	+	intron-Distal	3.95865	6.29995	HepG2	HNRNPM
chr17	55500743	55500810	+	intron-Distal	4.62098	5.72657	HepG2	MATR3
chr17	55351836	55351942	+	intron-Distal	3.00885	3.93430	K562	FUS
chr17	55564149	55564205	+	intron-Distal	3.15319	4.86332	HepG2	SUGP2
chr17	55518076	55518161	+	intron-Distal,intron-Proximal	4.58512	6.27118	HepG2	STAU2
chr17	55385851	55385914	+	intron-Distal	3.10410	4.11679	HepG2	SFPQ
chr17	55359849	55359900	+	intron-Distal	4.32713	11.44356	HepG2	HNRNPM
chr17	55367341	55367427	+	intron-Distal	4.05141	5.15110	HepG2	EXOSC5
chr17	55518082	55518142	+	intron-Distal,intron-Proximal	4.36577	6.92280	HepG2	HNRNPM
chr17	55346682	55346808	+	intron-Distal	3.58426	12.68683	HepG2	SUGP2
chr17	55347254	55347332	+	intron-Distal	5.62606	11.04738	K562	HNRNPM
chr17	55364771	55364835	+	intron-Distal	3.96270	3.80014	HepG2	FUS
chr17	55502770	55502816	+	intron-Distal	3.49096	6.85695	HepG2	QKI
chr17	55500937	55500982	+	intron-Distal	3.38121	4.36650	HepG2	SUGP2
chr17	55540971	55541054	+	intron-Distal	5.08450	7.87489	HepG2	HNRNPK
chr17	55614292	55614432	+	intron-Distal	4.29266	4.22186	HepG2	TAF15
chr17	55726304	55726387	+	intron-Distal	5.88246	17.23183	K562	HNRNPL
chr17	55727053	55727110	+	intron-Distal	7.29633	33.43249	K562	AGGF1
chr17	55612363	55612509	+	intron-Distal	4.05296	3.84437	HepG2	PRPF4
chr17	55517792	55517873	+	intron-Distal	5.63772	7.11777	HepG2	DKC1
chr17	55725676	55725781	+	intron-Distal	3.70229	6.22064	HepG2	QKI
chr17	55366186	55366223	+	intron-Distal	4.13830	3.14375	HepG2	RBFOX2
chr17	55623285	55623394	+	intron-Distal	3.92912	3.86417	HepG2	PRPF4
chr17	55484559	55484652	+	intron-Distal	3.14337	7.82166	HepG2	HNRNPM
chr17	55573701	55573794	+	intron-Distal	4.83248	5.33511	HepG2	HNRNPK
chr17	55726830	55726917	+	intron-Distal	6.16834	51.55194	HepG2	HNRNPL
chr17	55340217	55340275	+	intron-Distal	3.60384	10.70082	HepG2	HNRNPM
chr17	55562397	55562444	+	intron-Distal	4.21209	4.51299	HepG2	SUGP2
chr17	55632938	55633000	+	intron-Distal	4.31064	4.83379	HepG2	HNRNPK
chr17	55726827	55726991	+	intron-Distal	4.86653	17.25611	HepG2	CDC40
chr17	55609369	55609514	+	intron-Distal	3.32438	3.54196	HepG2	SRSF9
chr17	55484570	55484636	+	intron-Distal	4.06013	3.87294	K562	TARDBP
chr17	55533022	55533138	+	intron-Distal	4.49183	5.81661	K562	SAFB2
chr17	55494185	55494238	+	intron-Distal	3.93519	3.43967	HepG2	TAF15
chr17	55484286	55484336	+	intron-Distal	3.80393	3.07008	K562	NONO
chr17	55421795	55421857	+	intron-Distal	3.84752	6.23177	HepG2	SUGP2
chr17	55359499	55359545	+	intron-Distal	4.72470	14.03449	HepG2	HNRNPM
chr17	55346672	55346713	+	intron-Distal	3.41964	7.46034	HepG2	HNRNPM
chr17	55351717	55351801	+	intron-Distal	4.22815	4.23759	K562	NONO
chr17	55753266	55753305	+	intron-Distal	3.02505	3.16919	HepG2	AGGF1
chr17	55396017	55396067	+	intron-Distal	3.98366	3.01994	HepG2	GTF2F1
chr17	55520541	55520614	+	intron-Distal	3.87613	3.53896	K562	NONO
chr17	55534431	55534522	+	intron-Distal	4.12159	3.95871	HepG2	ILF3
chr17	55340562	55340598	+	intron-Distal	4.80112	6.19745	HepG2	HNRNPM
chr17	55726879	55726985	+	intron-Distal	6.20972	19.82916	K562	HNRNPL
chr17	55364775	55364841	+	intron-Distal	3.47798	11.53146	HepG2	RBFOX2
chr17	55347119	55347161	+	intron-Distal	3.80193	3.30664	K562	NONO
chr17	55345439	55345468	+	intron-Distal	3.43787	7.03905	HepG2	SUGP2
chr17	55753812	55753896	+	intron-Distal	4.09584	3.80299	K562	HNRNPL
chr17	55388572	55388620	+	intron-Distal	5.27711	8.23608	HepG2	HNRNPM
chr17	55755328	55755383	+	intron-Distal	3.72297	3.18512	HepG2	HNRNPU
chr17	55344811	55344856	+	intron-Distal	4.54806	10.75507	HepG2	MATR3
chr17	55417336	55417452	+	intron-Distal	4.93678	5.86222	K562	NONO
chr17	55377337	55377467	+	intron-Distal	3.48098	7.27124	HepG2	MATR3
chr17	55394465	55394523	+	intron-Distal	3.66196	5.03283	HepG2	RBFOX2
chr17	55419217	55419337	+	intron-Distal	6.18385	74.39860	HepG2	PTBP1
chr17	55344939	55344989	+	intron-Distal	3.38015	9.74936	HepG2	SUGP2
chr17	55479758	55479807	+	intron-Distal	3.88910	3.64994	HepG2	FUS
chr17	55507954	55508059	+	intron-Distal	3.14598	3.31127	HepG2	MATR3
chr17	55344273	55344339	+	intron-Distal	3.44130	10.67504	HepG2	SUGP2
chr17	55405654	55405776	+	intron-Distal	3.60261	3.41960	K562	GTF2F1
chr17	55346556	55346603	+	intron-Distal	3.80351	7.63365	HepG2	HNRNPM
chr17	55359554	55359606	+	intron-Distal	3.43487	8.79388	HepG2	HNRNPM
chr17	55345205	55345270	+	intron-Distal	4.45392	8.01961	HepG2	MATR3
chr17	55426222	55426338	+	intron-Distal	3.16679	5.71799	HepG2	SUGP2
chr17	55364859	55364915	+	intron-Distal	3.93253	5.84546	K562	RBFOX2
chr17	55520501	55520593	+	intron-Distal	3.10371	3.77382	HepG2	HNRNPM
chr17	55344406	55344503	+	intron-Distal	6.42417	19.83284	HepG2	MATR3
chr17	55621453	55621542	+	intron-Distal	3.58548	5.17677	K562	EIF4G2
chr17	55554487	55554540	+	intron-Distal	5.00948	4.67055	K562	EIF4G2
chr17	55753228	55753312	+	intron-Distal	3.99560	6.55430	HepG2	RBFOX2
chr17	55349471	55349530	+	intron-Distal	4.33815	18.33930	HepG2	RBFOX2
chr17	55727107	55727131	+	intron-Distal	5.28651	15.95511	HepG2	AGGF1
chr17	55513939	55514072	+	intron-Distal	5.10341	8.79863	HepG2	TAF15
chr17	55344488	55344520	+	intron-Distal	4.43453	8.81208	HepG2	SUGP2
chr17	55366199	55366265	+	intron-Distal	4.09875	4.03833	K562	HNRNPM
chr17	55727110	55727175	+	intron-Distal	7.12484	30.15131	K562	AGGF1
chr17	55517814	55517874	+	intron-Distal	5.11204	13.42605	K562	EIF4G2
chr17	55359606	55359647	+	intron-Distal	3.53809	6.58367	HepG2	HNRNPM
chr17	55696392	55696462	+	intron-Distal	3.47734	4.49647	HepG2	RBFOX2
chr17	55502186	55502247	+	intron-Distal	3.65305	4.60009	HepG2	SUGP2
chr17	55608336	55608412	+	intron-Distal	3.68077	6.02286	HepG2	PRPF4
chr17	55484965	55485013	+	intron-Distal	4.03396	5.37814	HepG2	HNRNPM
chr17	55554542	55554605	+	intron-Distal	3.71567	5.60238	HepG2	IGF2BP1
chr17	55519026	55519118	+	intron-Distal	4.47210	3.41738	HepG2	PTBP1
chr17	55342607	55342669	+	intron-Distal	3.34510	8.14929	HepG2	HNRNPM
chr17	55726595	55726612	+	intron-Distal	4.88531	9.72420	HepG2	HNRNPL
chr17	55444814	55444908	+	intron-Distal	4.64337	3.62366	HepG2	HNRNPM
chr17	55726661	55726678	+	intron-Distal	5.18089	10.08643	HepG2	HNRNPL
chr17	55626050	55626102	+	intron-Distal	3.88195	3.07858	HepG2	HNRNPUL1
chr17	55533066	55533140	+	intron-Distal	3.58158	7.14479	HepG2	SLTM
chr17	55513772	55513828	+	intron-Distal	3.05570	3.46849	HepG2	TAF15
chr17	55726817	55726880	+	intron-Distal	4.21138	13.43867	HepG2	AGGF1
chr17	55425185	55425292	+	intron-Distal	3.43375	8.21258	HepG2	SUGP2
chr17	55366034	55366100	+	intron-Distal	3.59908	6.20839	HepG2	HNRNPM
chr17	55346819	55346918	+	intron-Distal	5.14598	5.37222	HepG2	MATR3
chr17	55502330	55502409	+	intron-Distal	3.19829	4.61989	HepG2	SUGP2
chr17	55396546	55396587	+	intron-Distal	3.30541	3.11000	HepG2	HNRNPM
chr17	55344874	55344915	+	intron-Distal	3.75350	8.37901	HepG2	SUGP2
chr17	55347324	55347371	+	intron-Distal	5.49462	21.92774	HepG2	HNRNPM
chr17	55397533	55397583	+	intron-Distal	4.12716	3.62366	HepG2	HNRNPM
chr17	55484376	55484446	+	intron-Distal,intron-Proximal	3.25457	6.97151	HepG2	HNRNPM
chr17	55554528	55554606	+	intron-Distal	5.12595	9.32999	HepG2	DKC1
chr17	55639502	55639597	+	intron-Distal	3.69728	5.59440	HepG2	HNRNPK
chr17	55334222	55334267	+	intron-Distal,intron-Proximal	4.62363	4.09264	K562	AQR
chr17	55390970	55391047	+	intron-Distal	3.06165	3.22951	HepG2	HNRNPU
chr17	55726833	55726956	+	intron-Distal	3.84208	3.71159	HepG2	YBX3
chr17	55533072	55533135	+	intron-Distal	3.92853	8.52328	HepG2	HLTF
chr17	55456857	55456907	+	intron-Distal	4.55354	5.83842	HepG2	SUGP2
chr17	55344611	55344691	+	intron-Distal	3.13586	10.36965	HepG2	MATR3
chr17	55420510	55420556	+	intron-Distal	4.40376	4.86548	HepG2	SUGP2
chr17	55344618	55344658	+	intron-Distal	3.28958	5.21690	HepG2	HNRNPM
chr17	55343205	55343285	+	intron-Distal	3.83480	9.33123	HepG2	SUGP2
chr17	55539242	55539303	+	intron-Distal	4.93114	4.90095	K562	PTBP1
chr17	55392783	55392864	+	intron-Distal	3.24068	7.24875	HepG2	FAM120A
chr17	55344573	55344611	+	intron-Distal	4.97828	7.87294	HepG2	MATR3
chr17	55385181	55385245	+	intron-Distal	4.29480	7.82201	HepG2	QKI
chr17	55727069	55727188	+	intron-Distal	5.31494	8.00387	K562	GTF2F1
chr17	55344404	55344477	+	intron-Distal	3.62140	13.33830	HepG2	SUGP2
chr17	55729654	55729712	+	intron-Distal	4.09444	3.85108	HepG2	GTF2F1
chr17	55532997	55533127	+	intron-Distal	4.26649	5.33662	K562	SLTM
chr17	55568388	55568452	+	intron-Distal	4.08298	3.63454	HepG2	SUGP2
chr17	55427670	55427736	+	intron-Distal	4.83468	5.02084	HepG2	HNRNPM
chr17	55492500	55492626	+	intron-Distal	3.16761	8.36677	HepG2	SFPQ
chr17	55508304	55508340	+	intron-Distal	3.38121	4.35402	HepG2	SUGP2
chr17	55540999	55541178	+	intron-Distal	3.76912	5.89669	K562	HNRNPK
chr17	55626034	55626101	+	intron-Distal	3.74049	4.60998	HepG2	PCBP2
chr17	55705007	55705058	+	intron-Distal	3.83583	4.62831	HepG2	PCBP2
chr17	55517572	55517652	+	intron-Distal	3.68369	10.20546	HepG2	HNRNPM
chr17	55565307	55565354	+	intron-Distal	4.12098	3.96879	HepG2	MATR3
chr17	55752582	55752644	+	intron-Distal,intron-Proximal	3.44321	8.81681	HepG2	EFTUD2
chr17	55364915	55364977	+	intron-Distal	3.87246	4.57350	K562	RBFOX2
chr17	55385400	55385498	+	intron-Distal	3.21697	3.38183	K562	NONO
chr17	55753120	55753166	+	intron-Distal	4.32036	4.96433	HepG2	TIAL1
chr17	55508799	55508877	+	intron-Distal	3.65638	8.49452	HepG2	SUGP2
chr17	55705063	55705139	+	intron-Distal	4.81315	12.97823	HepG2	PCBP2
chr17	55726687	55726726	+	intron-Distal	6.62949	14.71445	HepG2	HNRNPL
chr17	55726798	55726878	+	intron-Distal	5.61227	17.81424	HepG2	XPO5
chr17	55484863	55484893	+	intron-Distal	3.67089	4.61500	HepG2	HNRNPM
chr17	55726426	55726487	+	intron-Distal	5.23284	19.54323	HepG2	HNRNPL
chr17	55379413	55379497	+	intron-Distal	3.22985	6.60828	HepG2	QKI
chr17	55394103	55394164	+	intron-Distal	3.80882	5.00859	HepG2	RBFOX2
chr17	55609305	55609399	+	intron-Distal	4.71613	4.53722	K562	SLTM
chr17	55334548	55334609	+	intron-Distal,intron-Proximal	3.66526	3.71919	HepG2	TIAL1
chr17	55364923	55365000	+	intron-Distal	4.21294	4.79560	HepG2	STAU2
chr17	55726487	55726550	+	intron-Distal	3.89485	12.72563	HepG2	AGGF1
chr17	55445860	55445913	+	intron-Distal	3.44234	4.48459	HepG2	XPO5
chr17	55346959	55347014	+	intron-Distal	4.05707	3.53723	HepG2	PTBP1
chr17	55376664	55376722	+	intron-Distal	3.05354	4.54788	HepG2	SUGP2
chr17	55367369	55367427	+	intron-Distal	3.53694	7.27933	HepG2	HNRNPM
chr17	55344094	55344131	+	intron-Distal	3.09052	6.11961	HepG2	SUGP2
chr17	55541054	55541133	+	intron-Distal	4.54983	11.12527	HepG2	HNRNPK
chr17	55529832	55529888	+	intron-Distal	4.02111	4.99837	HepG2	XPO5
chr17	55341558	55341582	+	intron-Distal	4.16568	14.95421	HepG2	HNRNPM
chr17	55425312	55425417	+	intron-Distal	3.60497	4.28420	HepG2	HNRNPM
chr17	55561621	55561668	+	intron-Distal	4.57975	5.37222	HepG2	MATR3
chr17	55560435	55560487	+	intron-Distal	5.46651	9.38442	HepG2	QKI
chr17	55726330	55726372	+	intron-Distal	5.38068	20.97899	HepG2	HNRNPL
chr17	55369832	55369892	+	intron-Distal	4.07412	3.29554	HepG2	GTF2F1
chr17	55621415	55621544	+	intron-Distal	4.95719	7.88729	K562	TARDBP
chr17	55429280	55429384	+	intron-Distal	3.52966	4.16402	K562	TARDBP
chr17	55403648	55403734	+	intron-Distal	4.16316	4.58989	K562	NONO
chr17	55388160	55388204	+	intron-Distal	3.23836	3.39857	HepG2	HNRNPM
chr17	55349383	55349449	+	intron-Distal	3.84093	3.07008	K562	NONO
chr17	55421389	55421442	+	intron-Distal	3.18450	5.59399	HepG2	SUGP2
chr17	55492495	55492574	+	intron-Distal	3.18601	3.92145	HepG2	TAF15
chr17	55395549	55395610	+	intron-Distal	3.24685	5.32645	HepG2	RBFOX2
chr17	55726459	55726526	+	intron-Distal	4.53031	4.14518	HepG2	GTF2F1
chr17	55344814	55344874	+	intron-Distal	3.37577	14.42521	HepG2	SUGP2
chr17	55369480	55369588	+	intron-Distal	3.47496	6.23791	HepG2	PRPF4
chr17	55502722	55502770	+	intron-Distal	3.23256	5.43403	HepG2	QKI
chr17	55347234	55347343	+	intron-Distal	4.26934	7.20180	K562	TARDBP
chr17	55734668	55734732	+	intron-Distal	3.45055	6.46712	HepG2	RBFOX2
chr17	55367290	55367337	+	intron-Distal	3.90863	5.62053	HepG2	HNRNPM
chr17	55727131	55727224	+	intron-Distal	5.73935	20.61233	HepG2	AGGF1
chr17	55726880	55726969	+	intron-Distal	4.26078	4.01795	HepG2	LARP4
chr17	55430664	55430729	+	intron-Distal	4.97147	7.51573	HepG2	HNRNPM
chr17	55754444	55754547	+	intron-Distal,intron-Proximal	3.10732	12.04035	HepG2	XPO5
chr17	55726445	55726486	+	intron-Distal	5.28364	25.64927	K562	AGGF1
chr17	55423216	55423285	+	intron-Distal	4.43638	4.20763	HepG2	U2AF2
chr17	55343315	55343370	+	intron-Distal	3.63850	7.20487	HepG2	SUGP2
chr17	55634291	55634378	+	intron-Distal	3.50679	4.75223	HepG2	RBFOX2
chr17	55569573	55569653	+	intron-Distal	3.60286	3.64140	HepG2	SFPQ
chr17	55395546	55395627	+	intron-Distal	3.97996	3.48722	HepG2	PRPF4
chr17	55484724	55484794	+	intron-Distal	3.25529	6.25664	HepG2	SFPQ
chr17	55726483	55726544	+	intron-Distal	4.88101	7.67538	K562	HNRNPL
chr17	55726568	55726661	+	intron-Distal	3.27129	4.69076	HepG2	CDC40
chr17	55629272	55629377	+	intron-Distal	4.63382	5.62745	HepG2	HNRNPK
chr17	55541371	55541473	+	intron-Distal	4.46148	4.85626	K562	TARDBP
chr17	55413525	55413644	+	intron-Distal	4.34199	4.89093	HepG2	TAF15
chr17	55726586	55726595	+	intron-Distal	5.03718	13.16551	HepG2	HNRNPL
chr17	55562053	55562178	+	intron-Distal	3.44758	5.28181	HepG2	MATR3
chr17	55519935	55519984	+	intron-Distal	3.83827	3.33307	HepG2	STAU2
chr17	55508149	55508240	+	intron-Distal	3.97109	3.31153	K562	GTF2F1
chr17	55366057	55366140	+	intron-Distal	3.55844	5.30350	K562	HNRNPM
chr17	55754866	55754915	+	intron-Distal	4.81550	4.22343	HepG2	XPO5
chr17	55726851	55726990	+	intron-Distal	5.38862	10.00399	K562	GTF2F1
chr17	55726612	55726633	+	intron-Distal	5.47204	11.15582	HepG2	HNRNPL
chr17	55726559	55726640	+	intron-Distal	4.61047	19.34166	HepG2	AGGF1
chr17	55626053	55626132	+	intron-Distal	3.93847	6.63019	HepG2	GTF2F1
chr17	55422053	55422160	+	intron-Distal	3.30920	7.87354	HepG2	HNRNPL
chr17	55511194	55511224	+	intron-Distal	3.27138	3.12686	HepG2	SFPQ
chr17	55726633	55726661	+	intron-Distal	5.24964	9.81913	HepG2	HNRNPL
chr17	55387396	55387454	+	intron-Distal	4.40306	8.95632	HepG2	HNRNPM
chr17	55425060	55425122	+	intron-Distal	3.83540	5.95721	HepG2	MATR3
chr17	55365636	55365688	+	intron-Distal	4.27707	3.78162	K562	HNRNPM
chr17	55419622	55419755	+	intron-Distal	3.15923	5.28375	HepG2	HNRNPM
chr17	55562041	55562211	+	intron-Distal	3.97316	3.62737	K562	HNRNPK
chr17	55484838	55484895	+	intron-Distal	3.25880	3.59523	HepG2	SUGP2
chr17	55364841	55364917	+	intron-Distal	4.48574	19.72375	HepG2	RBFOX2
chr17	55726730	55726769	+	intron-Distal	3.81678	6.22772	HepG2	AGGF1
chr17	55725981	55726037	+	intron-Distal	4.45072	5.10284	K562	HNRNPL
chr17	55517503	55517633	+	intron-Distal	4.54251	4.51377	K562	HNRNPM
chr17	55437559	55437611	+	intron-Distal	4.97738	5.68226	HepG2	HNRNPM
chr17	55420709	55420738	+	intron-Distal	3.98584	3.79098	HepG2	SUGP2
chr17	55502075	55502149	+	intron-Distal	4.26986	7.94355	HepG2	HNRNPM
chr17	55392682	55392753	+	intron-Distal	3.51258	3.64140	HepG2	SFPQ
chr17	55395966	55396047	+	intron-Distal	3.79347	3.15816	HepG2	PRPF4
chr17	55386875	55386934	+	intron-Distal	3.20733	3.54181	HepG2	SFPQ
chr17	55508132	55508218	+	intron-Distal	4.56472	11.37442	HepG2	SUGP2
chr17	55415466	55415514	+	intron-Distal	3.87920	3.84404	HepG2	HNRNPC
chr17	55368275	55368326	+	intron-Distal	4.27042	4.31871	HepG2	HNRNPM
chr17	55413995	55414088	+	intron-Distal	3.95736	3.89652	HepG2	SFPQ
chr17	55540798	55540929	+	intron-Distal	3.67151	9.80262	HepG2	HNRNPK
chr17	55437420	55437461	+	intron-Distal	4.89745	5.16513	HepG2	HNRNPM
chr17	55435396	55435461	+	intron-Distal	4.27154	8.95632	HepG2	HNRNPM
chr17	55726858	55727001	+	intron-Distal	9.46818	151.02033	K562	AGGF1
chr17	55533075	55533139	+	intron-Distal	3.54017	8.17399	HepG2	RBM22
chr17	55387262	55387293	+	intron-Distal	3.94118	3.34098	HepG2	HNRNPM
chr17	55727048	55727107	+	intron-Distal	6.74731	21.76883	HepG2	AGGF1
chr17	55395837	55395912	+	intron-Distal	3.73644	3.35727	HepG2	FUS
chr17	55341522	55341591	+	intron-Distal	5.22634	7.88580	K562	HNRNPM
chr17	55560487	55560573	+	intron-Distal	4.86900	5.89032	HepG2	QKI
chr17	55724320	55724396	+	intron-Distal	3.56006	4.58716	HepG2	QKI
chr17	55364794	55364851	+	intron-Distal	3.02013	3.72558	HepG2	SFPQ
chr17	55726880	55726988	+	intron-Distal	5.56055	43.09321	HepG2	AGGF1
chr17	55609329	55609391	+	intron-Distal	4.06005	5.10133	HepG2	SLTM
chr17	55755668	55755730	+	intron-Distal	4.04762	9.27038	HepG2	QKI
chr17	55479136	55479177	+	intron-Distal	3.46903	3.85482	HepG2	CDC40
chr17	55754613	55754718	+	intron-Distal	5.45773	8.88784	K562	PTBP1
chr17	55704519	55704582	+	intron-Proximal	3.23946	3.37120	HepG2	SF3B4
chr17	55334773	55334806	+	intron-Proximal	3.35462	14.60562	HepG2	U2AF2
chr17	55334508	55334542	+	intron-Proximal	5.19963	7.23718	K562	AQR
chr17	55478837	55478865	+	intron-Proximal	3.66395	4.22917	HepG2	PPIG
chr17	55334499	55334508	+	intron-Proximal	4.84602	4.86944	K562	AQR
chr17	55335732	55335779	+	intron-Proximal	3.61376	4.72143	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for MSI2 is not avaliable on ENCORE database.

Diffrential Expression

7,239 differentially expressed genes after Knockdown/Knockout MSI2 protein.

93 RBPs can affect the levels of MSI2.

7,239 differentially expressed genes after Knockdown/Knockout MSI2 protein :

Only display 100 entries as example. Please click "View All" button to see all 7,239 entries.

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SCYL3	ENSG00000000457.9	215.01070	116.58060	0.88300	4.86440	3.81240	HepG2	MSI2
FUCA2	ENSG00000001036.9	3309.80190	2570.56090	0.36460	4.57650	3.55660	HepG2	MSI2
MYH16	ENSG00000002079.8	32.15400	8.00500	2.00590	2.67110	1.87630	HepG2	MSI2
LAP3	ENSG00000002549.8	1379.30890	1686.46390	-0.29010	2.48430	1.71610	HepG2	MSI2
CD99	ENSG00000002586.13	4719.97590	3256.91510	0.53520	8.19720	6.87290	HepG2	MSI2
LASP1	ENSG00000002834.13	9042.68080	7536.04450	0.26280	2.60270	1.81810	HepG2	MSI2
M6PR	ENSG00000003056.3	2592.70210	1779.99140	0.54250	7.92000	6.61620	HepG2	MSI2
ALS2	ENSG00000003393.10	1485.85420	1097.64260	0.43680	4.43810	3.42870	HepG2	MSI2
CFLAR	ENSG00000003402.15	2111.09900	1760.33730	0.26200	2.27570	1.53970	HepG2	MSI2
TFPI	ENSG00000003436.10	13811.06320	11234.80390	0.29770	3.15840	2.29670	HepG2	MSI2
SLC7A2	ENSG00000003989.12	4248.84180	5332.47710	-0.32770	4.09130	3.11520	HepG2	MSI2
POLDIP2	ENSG00000004142.7	1385.63420	1826.50290	-0.39850	4.56810	3.54890	HepG2	MSI2
FKBP4	ENSG00000004478.5	816.52930	1612.20590	-0.98150	19.16860	17.28520	HepG2	MSI2
KDM1A	ENSG00000004487.11	1889.67260	3100.61200	-0.71440	13.03750	11.41920	HepG2	MSI2
RBM6	ENSG00000004534.10	2589.86540	3717.57560	-0.52150	8.14420	6.82190	HepG2	MSI2
ARHGAP33	ENSG00000004777.14	238.65310	401.31520	-0.74980	2.16280	1.44290	HepG2	MSI2
DVL2	ENSG00000004975.7	576.41440	940.79160	-0.70680	8.49810	7.15020	HepG2	MSI2
PRSS22	ENSG00000005001.5	12.64250	0.94370	3.74380	2.13410	1.41900	HepG2	MSI2
UPF1	ENSG00000005007.8	1632.62950	1945.34650	-0.25280	2.19690	1.47080	HepG2	MSI2
SLC25A5	ENSG00000005022.5	2771.44260	3436.39770	-0.31030	3.40340	2.50890	HepG2	MSI2
DHX33	ENSG00000005100.8	945.80040	1236.55040	-0.38670	2.79640	1.98420	HepG2	MSI2
ACSM3	ENSG00000005187.7	708.81590	920.09770	-0.37640	2.77470	1.96560	HepG2	MSI2
SPPL2B	ENSG00000005206.12	709.25790	536.39560	0.40290	2.19860	1.47200	HepG2	MSI2
CREBBP	ENSG00000005339.8	2080.42800	2559.49100	-0.29900	2.79030	1.97920	HepG2	MSI2
GCFC2	ENSG00000005436.9	328.97860	469.21740	-0.51230	3.17810	2.31390	HepG2	MSI2
WDR54	ENSG00000005448.12	60.74030	147.57460	-1.28070	3.84880	2.89830	HepG2	MSI2
CROT	ENSG00000005469.7	266.58430	156.06990	0.77230	4.70290	3.66960	HepG2	MSI2
RHBDD2	ENSG00000005486.12	1028.69690	610.05350	0.75370	9.00420	7.62430	HepG2	MSI2
ITGAL	ENSG00000005844.13	18.50460	96.90800	-2.38870	10.90150	9.40520	HepG2	MSI2
ITGA3	ENSG00000005884.13	3159.52340	87.47150	5.17470	185.69240	181.62150	HepG2	MSI2
ZFX	ENSG00000005889.11	531.25490	921.26810	-0.79420	10.07030	8.62360	HepG2	MSI2
ASB4	ENSG00000005981.8	257.88380	66.15680	1.96270	17.27010	15.45810	HepG2	MSI2
GDE1	ENSG00000006007.7	4118.31030	1603.87560	1.36040	46.16560	43.59300	HepG2	MSI2
CRLF1	ENSG00000006016.6	6093.82710	4318.02920	0.49690	3.44170	2.54080	HepG2	MSI2
OSBPL7	ENSG00000006025.7	421.22580	234.39570	0.84550	6.50010	5.31090	HepG2	MSI2
TMEM98	ENSG00000006042.7	1038.16400	1433.21110	-0.46520	5.03900	3.97220	HepG2	MSI2
AP2B1	ENSG00000006125.12	3041.11030	3772.64640	-0.31100	3.50280	2.59350	HepG2	MSI2
SPATA20	ENSG00000006282.15	1736.30740	1246.48610	0.47810	5.34410	4.24930	HepG2	MSI2
TNFRSF12A	ENSG00000006327.9	1047.28220	495.01900	1.08100	12.53180	10.93720	HepG2	MSI2
MAP3K9	ENSG00000006432.11	798.84600	601.07280	0.41030	2.79470	1.98300	HepG2	MSI2
BAIAP2L1	ENSG00000006453.9	982.06420	733.97510	0.42000	3.65550	2.72760	HepG2	MSI2
PHTF2	ENSG00000006576.12	620.67350	370.42210	0.74460	7.73590	6.44750	HepG2	MSI2
USH1C	ENSG00000006611.11	15.48240	0.94370	4.03610	2.77830	1.96870	HepG2	MSI2
COX10	ENSG00000006695.6	271.35410	408.78670	-0.59120	3.90810	2.95110	HepG2	MSI2
MARK4	ENSG00000007047.10	586.02650	1043.24470	-0.83200	6.50760	5.31810	HepG2	MSI2
PROM1	ENSG00000007062.7	1090.52960	448.68370	1.28120	25.44140	23.35950	HepG2	MSI2
PAFAH1B1	ENSG00000007168.8	1971.93170	1504.75270	0.39000	3.98720	3.02040	HepG2	MSI2
KIAA0100	ENSG00000007202.10	4348.21750	3600.11780	0.27230	2.61580	1.82970	HepG2	MSI2
SLC13A2	ENSG00000007216.10	11.72600	0.00000	99999.99990	3.03120	2.18520	HepG2	MSI2
GAS7	ENSG00000007237.14	19.23880	91.84850	-2.25520	9.33010	7.92760	HepG2	MSI2
ST7L	ENSG00000007341.14	314.23040	226.66780	0.47110	2.13720	1.42170	HepG2	MSI2
RHBDF1	ENSG00000007384.11	444.67450	299.65680	0.56930	2.83990	2.02140	HepG2	MSI2
DNAJC11	ENSG00000007923.11	1197.27670	1613.99470	-0.43090	4.61190	3.58810	HepG2	MSI2
MYLIP	ENSG00000007944.10	179.64730	105.30480	0.77050	3.44650	2.54460	HepG2	MSI2
E2F2	ENSG00000007968.6	125.78410	208.60780	-0.72980	3.36890	2.47920	HepG2	MSI2
ADAM22	ENSG00000008277.10	191.65410	272.17870	-0.50600	2.08900	1.38150	HepG2	MSI2
SYPL1	ENSG00000008282.3	1415.39360	1036.20650	0.44980	4.93320	3.87410	HepG2	MSI2
CYB561	ENSG00000008283.11	20.42800	61.73170	-1.59550	3.77160	2.83070	HepG2	MSI2
SPAG9	ENSG00000008294.16	2354.40400	3254.06570	-0.46690	6.73480	5.52720	HepG2	MSI2
AASS	ENSG00000008311.10	381.66230	583.60150	-0.61270	4.90790	3.85050	HepG2	MSI2
CRY1	ENSG00000008405.7	518.98190	378.03540	0.45710	2.95830	2.12280	HepG2	MSI2
NFIX	ENSG00000008441.12	320.09580	806.59080	-1.33330	23.30930	21.27970	HepG2	MSI2
ST3GAL1	ENSG00000008513.10	874.52820	1338.60940	-0.61420	8.27210	6.94080	HepG2	MSI2
IL32	ENSG00000008517.12	3923.26120	2583.37720	0.60270	5.08700	4.01480	HepG2	MSI2
PKD1	ENSG00000008710.13	870.37800	1062.04010	-0.28710	2.04630	1.34540	HepG2	MSI2
MAPK8IP2	ENSG00000008735.10	181.84020	102.05010	0.83330	3.68870	2.75670	HepG2	MSI2
MED24	ENSG00000008838.13	1562.79650	1939.35690	-0.31140	3.07570	2.22470	HepG2	MSI2
RHOBTB2	ENSG00000008853.12	866.46670	365.06700	1.24690	20.55480	18.62380	HepG2	MSI2
HEATR5B	ENSG00000008869.7	946.88310	670.39050	0.49810	5.07570	4.00540	HepG2	MSI2
UBE3C	ENSG00000009335.13	1575.90210	1155.18070	0.44800	5.33640	4.24190	HepG2	MSI2
MLXIPL	ENSG00000009950.11	2890.17700	4413.93500	-0.61090	11.00460	9.50310	HepG2	MSI2
BAZ1B	ENSG00000009954.6	2700.45930	3316.77140	-0.29660	2.68210	1.88600	HepG2	MSI2
SPRTN	ENSG00000010072.11	287.93690	151.49820	0.92640	6.68240	5.47870	HepG2	MSI2
ZNF207	ENSG00000010244.12	3072.18650	3813.39810	-0.31180	3.19680	2.32920	HepG2	MSI2
UQCRC1	ENSG00000010256.6	1986.26700	2672.85060	-0.42830	2.10230	1.39270	HepG2	MSI2
NCAPD2	ENSG00000010292.8	2867.72870	4047.77540	-0.49720	7.57110	6.29540	HepG2	MSI2
IDS	ENSG00000010404.13	1720.16340	895.34720	0.94190	17.96730	16.12300	HepG2	MSI2
HFE	ENSG00000010704.14	75.85640	125.41470	-0.72540	2.46730	1.70160	HepG2	MSI2
SCMH1	ENSG00000010803.12	1044.74410	1603.61690	-0.61820	8.22870	6.90090	HepG2	MSI2
FYN	ENSG00000010810.13	765.13170	563.88090	0.44020	3.60360	2.68190	HepG2	MSI2
HIVEP2	ENSG00000010818.4	798.21190	1333.32080	-0.74020	11.42880	9.90130	HepG2	MSI2
CLCN6	ENSG00000011021.17	1502.51610	2084.73260	-0.47250	3.61920	2.69440	HepG2	MSI2
ABHD5	ENSG00000011198.3	136.04330	75.72390	0.84510	2.84060	2.02180	HepG2	MSI2
AKAP8L	ENSG00000011243.13	1122.22370	1510.71020	-0.42890	4.14380	3.16400	HepG2	MSI2
MBTD1	ENSG00000011258.11	683.23880	1193.52690	-0.80480	11.76230	10.21190	HepG2	MSI2
TTC19	ENSG00000011295.11	349.22430	477.90500	-0.45260	2.78800	1.97720	HepG2	MSI2
PTBP1	ENSG00000011304.12	3994.06710	6016.77020	-0.59110	11.49270	9.96210	HepG2	MSI2
SYT7	ENSG00000011347.5	156.56490	360.42880	-1.20300	11.88060	10.32290	HepG2	MSI2
PLAUR	ENSG00000011422.7	165.07980	61.79580	1.41750	7.03140	5.80060	HepG2	MSI2
ANLN	ENSG00000011426.6	1290.64550	2928.33980	-1.18200	24.97530	22.90440	HepG2	MSI2
PPP5C	ENSG00000011485.10	881.95070	1153.51530	-0.38730	3.46500	2.55980	HepG2	MSI2
MAP4K3	ENSG00000011566.10	2322.44530	2930.88880	-0.33570	3.39250	2.49950	HepG2	MSI2
TMEM159	ENSG00000011638.6	187.98800	96.68130	0.95920	4.90830	3.85060	HepG2	MSI2
CD22	ENSG00000012124.10	4.12270	23.85250	-2.53250	2.22000	1.49100	HepG2	MSI2
MBTPS2	ENSG00000012174.7	403.46350	721.38230	-0.83830	9.58490	8.16620	HepG2	MSI2
EXTL3	ENSG00000012232.4	1209.24460	686.21960	0.81730	12.19310	10.61500	HepG2	MSI2
NR1H4	ENSG00000012504.9	470.53070	739.03940	-0.65140	2.04520	1.34460	HepG2	MSI2
ELOVL5	ENSG00000012660.9	4191.98840	2712.15310	0.62810	11.55080	10.01650	HepG2	MSI2
MAN2B2	ENSG00000013288.4	1145.32550	708.18480	0.69350	8.72660	7.36620	HepG2	MSI2
CLDN11	ENSG00000013297.6	61.47290	134.16880	-1.12600	4.77090	3.72900	HepG2	MSI2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

93 RBPs can affect the gene expression of MSI2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MSI2	ENSG00000153944.6	3106.11150	3674.20800	-0.24230	3.97630	3.27200	HepG2	ACO1
MSI2	ENSG00000153944.6	2415.52310	4453.63350	-0.88260	12.20640	11.16740	HepG2	AKAP1
MSI2	ENSG00000153944.6	2420.80110	3251.64090	-0.42570	2.78100	1.84100	HepG2	BCCIP
MSI2	ENSG00000153944.6	2606.42190	3416.64720	-0.39050	5.44750	4.41250	HepG2	CALR
MSI2	ENSG00000153944.6	3252.57480	4899.29850	-0.59100	5.25550	3.89150	HepG2	CCAR1
MSI2	ENSG00000153944.6	2790.62300	3673.65110	-0.39660	10.56500	9.43800	HepG2	CKAP4
MSI2	ENSG00000153944.6	2755.58250	4890.85230	-0.82770	7.10470	5.88250	HepG2	CNOT7
MSI2	ENSG00000153944.6	1839.90800	3285.11840	-0.83630	4.99090	4.09120	HepG2	CPSF6
MSI2	ENSG00000153944.6	2556.63100	3398.22710	-0.41050	10.22560	8.82170	HepG2	DDX19B
MSI2	ENSG00000153944.6	2700.71800	3309.92240	-0.29350	2.37530	1.43670	HepG2	DDX5
MSI2	ENSG00000153944.6	2477.77470	3515.28390	-0.50460	9.68630	8.57730	HepG2	DKC1
MSI2	ENSG00000153944.6	1957.73240	3441.68190	-0.81390	25.14590	23.26030	HepG2	DNAJC21
MSI2	ENSG00000153944.6	2277.02850	3411.11490	-0.58310	21.03750	19.39450	HepG2	DNAJC2
MSI2	ENSG00000153944.6	2473.13880	3254.36430	-0.39600	2.66870	1.76020	HepG2	EEF2
MSI2	ENSG00000153944.6	3308.49940	2642.01250	0.32440	2.59550	1.71690	HepG2	EIF3D
MSI2	ENSG00000153944.6	2970.64750	3893.08930	-0.39010	2.85340	2.20510	HepG2	EIF4A3
MSI2	ENSG00000153944.6	6683.89830	3790.77230	0.81810	8.81710	7.62520	HepG2	EIF4B
MSI2	ENSG00000153944.6	4202.51600	4839.06210	-0.20350	2.74800	1.91360	HepG2	EIF4G1
MSI2	ENSG00000153944.6	5314.82310	5995.06730	-0.17380	2.00610	1.47630	HepG2	ETF1
MSI2	ENSG00000153944.6	2860.07970	3590.57220	-0.32820	3.48440	2.54430	HepG2	EWSR1
MSI2	ENSG00000153944.6	3758.25800	3007.29040	0.32150	3.22720	2.00290	HepG2	FASTKD2
MSI2	ENSG00000153944.6	3226.01960	4588.89340	-0.50840	4.69000	2.54170	HepG2	FMR1
MSI2	ENSG00000153944.6	2513.83470	2096.14320	0.26210	2.17620	1.47130	HepG2	FUBP3
MSI2	ENSG00000153944.6	4739.03850	3928.44510	0.27050	1.89040	1.31350	HepG2	FXR1
MSI2	ENSG00000153944.6	1921.59550	3724.30080	-0.95470	5.67510	4.78040	HepG2	GPKOW
MSI2	ENSG00000153944.6	2628.51210	3474.65210	-0.40260	4.17610	3.40470	HepG2	HNRNPA1
MSI2	ENSG00000153944.6	2361.38650	3864.84980	-0.71080	12.76990	11.37920	HepG2	HNRNPC
MSI2	ENSG00000153944.6	2385.84270	3554.13600	-0.57500	2.97480	2.32550	HepG2	HNRNPLL
MSI2	ENSG00000153944.6	2997.90980	3839.30200	-0.35690	7.24120	6.29660	HepG2	HNRNPU
MSI2	ENSG00000153944.6	2432.07600	3153.23100	-0.37460	5.01690	4.06950	HepG2	IGF2BP1
MSI2	ENSG00000153944.6	2463.88090	3703.91140	-0.58810	7.02360	5.99570	HepG2	IGF2BP2
MSI2	ENSG00000153944.6	3199.93430	3921.72990	-0.29340	6.58960	5.50550	HepG2	ILF2
MSI2	ENSG00000153944.6	3220.23610	4767.56430	-0.56610	4.13280	2.48440	HepG2	ILF3
MSI2	ENSG00000153944.6	3483.39420	4657.61080	-0.41910	3.01710	1.76310	HepG2	KHDRBS1
MSI2	ENSG00000153944.6	2892.11050	3358.83710	-0.21580	3.57290	2.41330	HepG2	KIF1C
MSI2	ENSG00000153944.6	2767.41240	3929.81870	-0.50590	5.18560	4.29400	HepG2	MAGOH
MSI2	ENSG00000153944.6	2396.10130	3951.73520	-0.72180	8.77120	7.69890	HepG2	MATR3
MSI2	ENSG00000153944.6	1198.39340	3282.87990	-1.45390	40.72900	38.25460	HepG2	MSI2
MSI2	ENSG00000153944.6	2526.52970	3623.96300	-0.52040	2.43610	1.53140	HepG2	MTPAP
MSI2	ENSG00000153944.6	3315.73250	4863.71860	-0.55270	11.65500	10.13290	HepG2	NOL12
MSI2	ENSG00000153944.6	3124.42100	3800.32470	-0.28250	4.51660	3.46400	HepG2	PARN
MSI2	ENSG00000153944.6	2703.31430	3564.93570	-0.39910	6.93670	6.04630	HepG2	PCBP1
MSI2	ENSG00000153944.6	2899.39320	4184.26420	-0.52920	4.70900	2.33560	HepG2	PPIG
MSI2	ENSG00000153944.6	1850.08030	3424.36080	-0.88820	28.65300	26.49020	HepG2	PPIL4
MSI2	ENSG00000153944.6	4063.56960	3219.79720	0.33570	6.01040	4.91700	HepG2	PRPF4
MSI2	ENSG00000153944.6	2774.01610	3627.66220	-0.38710	6.29820	5.53850	HepG2	PTBP1
MSI2	ENSG00000153944.6	2323.58420	4642.86120	-0.99870	26.23570	24.65170	HepG2	PUF60
MSI2	ENSG00000153944.6	3746.54810	4925.00920	-0.39460	5.95940	4.98900	HepG2	PUM2
MSI2	ENSG00000153944.6	2334.70720	3742.45450	-0.68070	25.42480	23.90610	HepG2	PUS1
MSI2	ENSG00000153944.6	5580.86240	3928.40690	0.50640	10.81360	9.69710	HepG2	QKI
MSI2	ENSG00000153944.6	6323.95470	4060.46710	0.63910	4.06200	3.21600	HepG2	RAVER1
MSI2	ENSG00000153944.6	2940.88910	3974.61970	-0.43460	6.27210	5.04750	HepG2	RBM15
MSI2	ENSG00000153944.6	5764.52180	5010.77850	0.20210	2.34070	1.85370	HepG2	RBM22
MSI2	ENSG00000153944.6	4526.55480	3565.44830	0.34420	4.20970	3.39320	HepG2	RBM25
MSI2	ENSG00000153944.6	2380.19210	3449.62950	-0.53540	7.48380	6.44210	HepG2	RPLP0
MSI2	ENSG00000153944.6	2950.97910	4908.58220	-0.73410	7.29610	6.00930	HepG2	RPS3A
MSI2	ENSG00000153944.6	3056.66530	2440.29390	0.32480	2.56050	1.80070	HepG2	RRP9
MSI2	ENSG00000153944.6	2321.47290	3419.10260	-0.55860	17.77830	16.35000	HepG2	SAFB2
MSI2	ENSG00000153944.6	1894.59180	2580.29640	-0.44560	3.25260	2.22950	HepG2	SERBP1
MSI2	ENSG00000153944.6	2597.63940	3870.94500	-0.57550	4.70110	3.80850	HepG2	SF3A3
MSI2	ENSG00000153944.6	2541.00890	3518.10210	-0.46940	2.21370	1.57820	HepG2	SF3B1
MSI2	ENSG00000153944.6	2556.90640	3987.30940	-0.64100	28.91020	27.19360	HepG2	SMN1
MSI2	ENSG00000153944.6	4456.89520	3941.99320	0.17700	2.55490	2.09570	HepG2	SRSF1
MSI2	ENSG00000153944.6	3855.39700	4584.17170	-0.24980	3.88950	3.16890	HepG2	SRSF5
MSI2	ENSG00000153944.6	3721.84600	3207.15180	0.21460	3.30170	2.70940	HepG2	SRSF9
MSI2	ENSG00000153944.6	2432.33460	4913.83090	-1.01450	53.82170	52.26290	HepG2	SSB
MSI2	ENSG00000153944.6	4613.19270	5213.44680	-0.17650	2.70200	2.08570	HepG2	SUCLG1
MSI2	ENSG00000153944.6	2834.03020	4345.90120	-0.61680	5.49430	3.62600	HepG2	SUGP2
MSI2	ENSG00000153944.6	2113.23190	2739.00540	-0.37420	4.02660	2.90260	HepG2	SUPT6H
MSI2	ENSG00000153944.6	2027.87500	3182.67650	-0.65030	6.49930	5.52880	HepG2	SUPV3L1
MSI2	ENSG00000153944.6	5112.96890	3543.63720	0.52880	12.64850	11.58000	HepG2	TAF15
MSI2	ENSG00000153944.6	2068.96050	3730.81810	-0.85060	23.02730	21.84670	HepG2	TIAL1
MSI2	ENSG00000153944.6	2545.13780	3763.93400	-0.56450	14.82210	13.66470	HepG2	TRIM56
MSI2	ENSG00000153944.6	2510.28300	3314.36710	-0.40090	8.89730	7.92300	HepG2	UTP3
MSI2	ENSG00000153944.6	2987.99840	4396.48590	-0.55720	4.29610	2.92520	HepG2	XPO5
MSI2	ENSG00000153944.6	2038.51450	3132.98990	-0.62000	6.75090	5.63340	HepG2	XRN2
MSI2	ENSG00000153944.6	2421.29030	3177.58460	-0.39220	5.12220	4.25660	HepG2	ZC3H8
MSI2	ENSG00000153944.6	3231.25910	3775.57390	-0.22460	4.18040	3.54590	HepG2	ZNF622
MSI2	ENSG00000153944.6	3233.64100	2829.88890	0.19230	2.27590	1.75320	K562	AGGF1
MSI2	ENSG00000153944.6	1897.63780	2833.98440	-0.57860	7.74740	6.84730	K562	AQR
MSI2	ENSG00000153944.6	1263.25720	2108.39090	-0.73900	13.82180	12.04700	K562	CPSF6
MSI2	ENSG00000153944.6	1260.30830	1597.30820	-0.34190	2.38660	1.54030	K562	EFTUD2
MSI2	ENSG00000153944.6	1430.93030	2119.31420	-0.56660	7.09270	5.67610	K562	FIP1L1
MSI2	ENSG00000153944.6	1869.24370	1481.98270	0.33480	2.32780	1.30490	K562	FKBP4
MSI2	ENSG00000153944.6	1558.16510	1929.29030	-0.30820	3.69600	3.01160	K562	FXR1
MSI2	ENSG00000153944.6	2155.78730	2874.12510	-0.41490	4.84400	3.84570	K562	GRSF1
MSI2	ENSG00000153944.6	1254.75220	1706.57180	-0.44370	4.90760	4.13530	K562	HNRNPC
MSI2	ENSG00000153944.6	1382.28370	1743.14850	-0.33460	2.18940	1.36490	K562	HNRNPM
MSI2	ENSG00000153944.6	1527.95440	2331.63780	-0.60970	9.66210	7.82690	K562	MATR3
MSI2	ENSG00000153944.6	1318.15960	3915.92110	-1.57080	51.74210	47.92220	K562	MSI2
MSI2	ENSG00000153944.6	1199.52600	1573.32920	-0.39140	2.80120	1.49760	K562	NONO
MSI2	ENSG00000153944.6	1734.06680	2405.81540	-0.47240	5.06520	3.89900	K562	PPIG
MSI2	ENSG00000153944.6	996.77950	1554.35910	-0.64100	7.09370	5.89450	K562	PRPF8
MSI2	ENSG00000153944.6	1305.74660	2269.82160	-0.79770	16.24510	14.70280	K562	PTBP1
MSI2	ENSG00000153944.6	2899.38100	4008.40800	-0.46730	5.68660	4.52050	K562	PUF60
MSI2	ENSG00000153944.6	1779.89440	2176.77120	-0.29040	2.28750	1.52810	K562	RBM22
MSI2	ENSG00000153944.6	1079.69870	1396.20390	-0.37090	3.51740	2.40210	K562	RCC2
MSI2	ENSG00000153944.6	1172.12070	1583.44970	-0.43390	2.86730	2.03480	K562	RPS19
MSI2	ENSG00000153944.6	1618.41940	2013.38000	-0.31500	3.22190	2.29840	K562	SF3B4
MSI2	ENSG00000153944.6	1650.30080	2225.12370	-0.43120	5.35760	4.38050	K562	SRSF1
MSI2	ENSG00000153944.6	1610.77870	1938.39410	-0.26710	2.45710	1.69960	K562	U2AF2
MSI2	ENSG00000153944.6	2867.37880	2377.85960	0.27000	4.01290	3.16210	K562	UPF1
MSI2	ENSG00000153944.6	2599.50590	2115.83940	0.29690	5.08830	3.97090	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MSI2 is not available on ENCORE database.

30 RBPs can affect the splicing of MSI2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.17500	0.00000	0.00001	included	HepG2	G3BP1
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.25300	0.00000	0.00000	excluded	HepG2	U2AF1
SE	MSI2	ENSG00000153944.6	chr17	+	55335630	55335715			55334402	55334499	55339511	55339553	-0.07700	0.00261	0.04519	excluded	HepG2	U2AF1
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.26100	0.00000	0.00010	excluded	K562	AKAP8L
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.08000	0.00000	0.00157	included	HepG2	HNRNPM
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.17300	0.00027	0.06163	excluded	HepG2	ILF3
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.13500	0.00000	0.00001	included	HepG2	QKI
SE	MSI2	ENSG00000153944.6	chr17	+	55334826	55334908			55334402	55334499	55335630	55335715	-0.09800	0.00000	0.00000	excluded	HepG2	U2AF2
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.10800	0.00125	0.01706	excluded	HepG2	U2AF2
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.14400	0.00002	0.00268	included	HepG2	AKAP1
SE	MSI2	ENSG00000153944.6	chr17	+	55607036	55607085			55478739	55478832	55674228	55674311	-0.08700	0.00033	0.00476	excluded	K562	AQR
SE	MSI2	ENSG00000153944.6	chr17	+	55335630	55335715			55334402	55334499	55339511	55339553	-0.11100	0.00061	0.00801	excluded	K562	AQR
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.34500	0.00000	0.00017	included	K562	FXR1
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.31200	0.00001	0.00036	excluded	K562	PUS1
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.14000	0.00008	0.00866	included	HepG2	NCBP2
SE	MSI2	ENSG00000153944.6	chr17	+	55674228	55674311			55607036	55607085	55693330	55693445	0.08100	0.00035	0.02110	included	HepG2	SFPQ
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.11500	0.00001	0.00138	excluded	HepG2	FTO
SE	MSI2	ENSG00000153944.6	chr17	+	55607036	55607085			55478739	55478832	55674228	55674311	-0.16700	0.00011	0.00940	excluded	K562	EFTUD2
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.16000	0.00010	0.00675	included	HepG2	MATR3
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.10300	0.00000	0.00047	excluded	HepG2	LARP4
SE	MSI2	ENSG00000153944.6	chr17	+	55335630	55335715			55334402	55334499	55339511	55339553	-0.08200	0.00035	0.01312	excluded	HepG2	SF3A3
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.18800	0.00104	0.06633	excluded	K562	HNRNPUL1
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.22400	0.00006	0.00479	excluded	HepG2	PCBP1
SE	MSI2	ENSG00000153944.6	chr17	+	55607036	55607085			55478739	55478832	55674228	55674311	-0.08000	0.00005	0.00440	excluded	HepG2	SF3B4
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.23200	0.00051	0.02058	excluded	K562	UTP18
SE	MSI2	ENSG00000153944.6	chr17	+	55448309	55448352			55339511	55339553	55478739	55478832	0.07900	0.00170	0.03072	included	K562	U2AF2
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.37300	0.00000	0.00002	excluded	K562	RBM15
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.31900	0.00000	0.00000	excluded	K562	AGGF1
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.40500	0.00124	0.05249	excluded	K562	HNRNPK
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.25900	0.00000	0.00000	excluded	HepG2	HNRNPU
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.17100	0.00001	0.00111	excluded	HepG2	HNRNPC
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.09100	0.00004	0.08931	included	HepG2	DDX52
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	0.11300	0.00029	0.07580	included	HepG2	DROSHA
SE	MSI2	ENSG00000153944.6	chr17	+	55754347	55754420			55752332	55752487	55756909	55762046	-0.40400	0.00008	0.07056	excluded	K562	PABPC4
MXE	MSI2	ENSG00000153944.6	chr17	+	55607036	55607085	55674228	55674311	55478739	55478832	55693330	55693445	-0.14800	0.00810	0.09499	2included	K562	SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MSI2

General Information

Functions

Localization(RBPImage: MSI2)

Domains (AlphaFold: MSI2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MSI2 is not avaliable on ENCORE database.

65 proteins are bound to MSI2 RNA:

eCLIP assay for MSI2 is not avaliable on ENCORE database.

Diffrential Expression

7,239 differentially expressed genes after Knockdown/Knockout MSI2 protein :

93 RBPs can affect the gene expression of MSI2 :

The Knockdown/knockout RNA-Seq assay for MSI2 is not available on ENCORE database.

30 RBPs can affect the splicing of MSI2 :

The Knockdown/knockout RNA-Seq assay for MSI2 is not avaliable on ENCORE database.