ST7L

General Information

Gene Name       : ST7L
Gene ID             : ENSG00000007341.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ST7L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ST7LENSG00000007341.186.475.295.88ENCSR000AEF
HepG2ST7LENSG00000007341.188.4012.6710.54ENCSR985KAT
K562ST7LENSG00000007341.1818.9117.9018.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ST7L is not avaliable on ENCORE database.



Proteins bound to RNA
  • ST7L RNA is bound by 9 proteins.  







eCLIP assay for ST7L is not avaliable on ENCORE database.





9 proteins are bound to ST7L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1113068522113068613-3'-UTR,intron-Distal,intron-Proximal4.391963.28485K562CPSF6
chr1113153437113153583-5'-UTR,CDS,intron-Distal,intron-Proximal4.228305.04143K562GRWD1
chr1113153466113153591-5'-UTR,CDS,intron-Distal,intron-Proximal3.562385.10069HepG2GRWD1
chr1113161613113161738-5'-UTR,CDS,intron-Distal,intron-Proximal3.837903.39325K562SRSF1
chr1113134146113134226-CDS,intron-Distal,intron-Proximal4.611845.23259HepG2BCLAF1
chr1113124658113124737-CDS,intron-Distal,intron-Proximal3.484863.16095HepG2U2AF2
chr1113068739113068796-intron-Distal4.308214.57682HepG2SF3B4
chr1113153803113153872-intron-Distal3.665687.64049K562KHSRP
chr1113153711113153803-intron-Distal,intron-Proximal4.210988.11138K562KHSRP
chr1113153257113153411-intron-Distal,intron-Proximal4.391704.35475K562RBFOX2
chr1113160293113160355-intron-Distal3.178653.20028K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ST7L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ST7L is not available on ENCORE database.

  • 12 RBPs can affect the levels of ST7L.  








The Knockdown/knockout RNA-Seq assay for ST7L is not available on ENCORE database.





12 RBPs can affect the gene expression of ST7L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ST7LENSG00000007341.14354.94800242.947300.546902.670402.05460HepG2DDX3X
ST7LENSG00000007341.14314.23040226.667800.471102.137201.42170HepG2MSI2
ST7LENSG00000007341.14335.45890245.195300.452102.673502.08480HepG2UTP3
ST7LENSG00000007341.14888.75580687.782700.369702.806201.82520K562CELF1
ST7LENSG00000007341.14753.63760578.720800.380903.488702.76880K562DDX47
ST7LENSG00000007341.14472.96280330.566600.516703.326302.67960K562HNRNPC
ST7LENSG00000007341.14807.32820596.170100.437303.069801.87700K562MSI2
ST7LENSG00000007341.14508.49790374.793600.440003.439002.54180K562MTPAP
ST7LENSG00000007341.14542.44970389.929400.476202.692901.87350K562PCBP3
ST7LENSG00000007341.14835.44710610.252800.453003.288102.39940K562PUF60
ST7LENSG00000007341.14177.56770260.98390-0.555603.038902.14260K562SF3B4
ST7LENSG00000007341.14339.97650251.262200.436102.402101.65420K562U2AF2
ST7LENSG00000007341.14500.87410377.821000.406602.571501.72480K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ST7L is not available on ENCORE database.





7 RBPs can affect the splicing of ST7L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEST7LENSG00000007341.14chr1-113159434113159517113153462113153625113161530113161766-0.217000.000160.00452excludedK562SRSF1
SEST7LENSG00000007341.14chr1-1131594341131595171131534621131536251131615301131617660.174000.000070.00143includedHepG2U2AF2
SEST7LENSG00000007341.14chr1-113159434113159517113153462113153625113161530113161766-0.079000.000560.01058excludedK562PUS1
SEST7LENSG00000007341.14chr1-1131594341131595171131534621131536251131615301131617660.177000.000650.07342includedHepG2HNRNPUL1
SEST7LENSG00000007341.14chr1-113159434113159517113153462113153625113161530113161766-0.416000.000080.00314excludedHepG2SRSF1
SEST7LENSG00000007341.14chr1-113159434113159517113153462113153625113161530113161766-0.086000.001820.05322excludedK562UTP18
SEST7LENSG00000007341.14chr1-113159434113159517113153462113153625113161530113161766-0.187000.000040.00282excludedK562HNRNPU
MXEST7LENSG00000007341.14chr1-1131209661131210391131246131131247281131196071131197101131249961131250940.417000.004520.087231includedHepG2XRN2
MXEST7LENSG00000007341.14chr1-113126593113126748113140592113140708113124996113125094113143415113143470-0.368000.001510.025422includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ST7L is not avaliable on ENCORE database.