FUCA2

General Information

Gene Name       : FUCA2
Gene ID             : ENSG00000001036.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FUCA2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FUCA2ENSG00000001036.1317.8315.1116.47ENCSR000AEF
HepG2FUCA2ENSG00000001036.1383.46137.49110.47ENCSR985KAT
K562FUCA2ENSG00000001036.1348.8953.3651.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FUCA2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • FUCA2 RNA is bound by 11 proteins.  







eCLIP assay for FUCA2 is not avaliable on ENCORE database.





11 proteins are bound to FUCA2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr6143816761143816953-3'-UTR,CDS,intron-Distal3.8710922.10152HepG2LARP4
chr6143816816143816842-3'-UTR,intron-Distal3.036309.60276K562YBX3
chr6143823068143823111-3'-UTR,CDS,intron-Distal,intron-Proximal3.968043.30795HepG2SND1
chr6143818527143818540-3'-UTR,CDS,intron-Distal5.5393456.25799K562YBX3
chr6143823140143823196-3'-UTR,CDS,intron-Distal3.648245.80891HepG2LARP4
chr6143816810143816889-3'-UTR,CDS,intron-Distal3.122715.66400HepG2DDX55
chr6143818524143818527-3'-UTR,CDS,intron-Distal,intron-Proximal5.4642553.10822K562YBX3
chr6143818551143818591-3'-UTR,CDS,intron-Distal4.321234.57227K562SND1
chr6143818540143818544-3'-UTR,CDS,intron-Distal5.4351251.53234K562YBX3
chr6143816666143816690-3'-UTR,intron-Distal3.402706.22789HepG2PCBP2
chr6143818525143818529-3'-UTR,CDS,intron-Distal,intron-Proximal3.054093.35914HepG2YBX3
chr6143818549143818590-3'-UTR,CDS,intron-Distal3.537056.89080HepG2LARP4
chr6143818544143818547-3'-UTR,CDS,intron-Distal3.040354.77932K562YBX3
chr6143832746143832803-5'-UTR,CDS,intron-Distal,intron-Proximal4.9077611.35836K562DDX3X
chr6143832728143832823-5'-UTR,CDS,intron-Distal,intron-Proximal4.80523400.00000HepG2DDX3X
chr6143832654143832746-CDS,intron-Distal5.3821114.74628K562DDX3X
chr6143823184143823213-CDS,intron-Distal3.907913.15232HepG2LIN28B
chr6143816962143816966-CDS,intron-Distal6.3888451.45108K562YBX3
chr6143832512143832573-CDS,intron-Distal4.023226.34676HepG2PRPF8
chr6143816981143816984-CDS,intron-Distal5.1489636.00951K562YBX3
chr6143816950143816962-CDS,intron-Distal3.896406.85451K562YBX3
chr6143828408143828450-CDS,intron-Distal3.542475.56131HepG2SND1
chr6143823581143823614-CDS,intron-Distal3.662965.32768K562YBX3
chr6143816975143816984-CDS,intron-Distal3.222344.19628HepG2YBX3
chr6143816966143816981-CDS,intron-Distal5.2160237.76792K562YBX3
chr6143832669143832728-CDS,intron-Distal4.20884400.00000HepG2DDX3X
chr6143825186143825329-CDS,intron-Distal3.123274.03899K562SND1
chr6143823644143823691-CDS,intron-Distal4.915184.94988HepG2SND1
chr6143825055143825142-CDS,intron-Distal3.428653.93930HepG2SND1
chr6143832620143832671-CDS,intron-Distal3.1009110.30206HepG2RPS3
chr6143825130143825134-CDS,intron-Distal3.057853.67697K562YBX3
chr6143823596143823703-CDS,intron-Distal,intron-Proximal3.369857.75945HepG2LIN28B
chr6143832547143832582-CDS,intron-Distal3.3276614.05133HepG2DDX3X
chr6143823519143823560-CDS,intron-Distal3.830224.12428HepG2SND1
chr6143823519143823563-CDS,intron-Distal4.397164.60263HepG2LIN28B
chr6143832621143832669-CDS,intron-Distal3.7213036.21088HepG2DDX3X
chr6143825288143825378-CDS,intron-Distal3.159809.49363HepG2RPS3
chr6143824523143824633-intron-Distal3.519573.62418K562PTBP1
chr6143824522143824758-intron-Distal4.024276.57428HepG2PTBP1
chr6143821336143821381-intron-Distal3.977533.54208HepG2SUGP2
chr6143819889143819952-intron-Distal3.920213.79098HepG2SUGP2
chr6143832470143832514-intron-Distal4.184883.89565K562PRPF8
chr6143821334143821409-intron-Distal4.693544.67693K562PTBP1
chr6143819840143819889-intron-Distal3.685053.04224HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FUCA2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FUCA2 is not available on ENCORE database.

  • 92 RBPs can affect the levels of FUCA2.  








The Knockdown/knockout RNA-Seq assay for FUCA2 is not available on ENCORE database.





92 RBPs can affect the gene expression of FUCA2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FUCA2ENSG00000001036.92287.339703144.49210-0.459203.641602.56560HepG2ABCF1
FUCA2ENSG00000001036.93271.159102706.049300.273504.714003.96080HepG2ACO1
FUCA2ENSG00000001036.92237.907603163.03420-0.499205.529304.18630HepG2ADAR
FUCA2ENSG00000001036.98357.775104223.654600.9845015.8988014.73120HepG2AKAP1
FUCA2ENSG00000001036.93613.448004502.91240-0.317505.503404.59180HepG2AUH
FUCA2ENSG00000001036.93697.722103028.070400.288102.496901.92510HepG2BOP1
FUCA2ENSG00000001036.94159.668003141.546500.404903.879602.98880HepG2CALR
FUCA2ENSG00000001036.92296.841804688.59270-1.0295045.2178043.27670HepG2CELF1
FUCA2ENSG00000001036.92077.485402502.68680-0.268604.310403.29720HepG2DDX19B
FUCA2ENSG00000001036.92684.049103248.19090-0.275202.490201.39540HepG2DDX1
FUCA2ENSG00000001036.93129.819902593.837000.270902.531401.66030HepG2DDX24
FUCA2ENSG00000001036.94442.762503475.334300.354202.508601.91850HepG2DDX6
FUCA2ENSG00000001036.92055.208202588.94400-0.333105.276604.39570HepG2DKC1
FUCA2ENSG00000001036.92190.815503156.86280-0.5270016.7364015.26450HepG2DNAJC2
FUCA2ENSG00000001036.92715.664103341.25640-0.299102.123601.59610HepG2EIF2S1
FUCA2ENSG00000001036.91653.707701158.936200.512803.741401.68220HepG2EIF3H
FUCA2ENSG00000001036.94895.506403594.997800.445403.011002.29620HepG2EIF4B
FUCA2ENSG00000001036.93907.773904973.68560-0.348007.434006.18220HepG2EIF4G1
FUCA2ENSG00000001036.96214.665104764.530100.383202.442301.67480HepG2EIF4G2
FUCA2ENSG00000001036.93291.644705169.92840-0.6513022.1904020.76620HepG2ETF1
FUCA2ENSG00000001036.94196.632903136.119300.420202.538201.46610HepG2FUS
FUCA2ENSG00000001036.92884.741603668.60600-0.346802.854001.94730HepG2G3BP2
FUCA2ENSG00000001036.91516.380501953.50130-0.365403.033902.09350HepG2GEMIN5
FUCA2ENSG00000001036.91917.078303151.20460-0.717008.817607.71840HepG2GPKOW
FUCA2ENSG00000001036.92196.146201530.912800.520503.355602.12490HepG2GRSF1
FUCA2ENSG00000001036.92647.355303215.56190-0.280502.614901.98450HepG2HNRNPA1
FUCA2ENSG00000001036.91878.552301365.194800.460403.162001.66320HepG2HNRNPAB
FUCA2ENSG00000001036.92593.785903576.69780-0.463605.837504.85870HepG2HNRNPC
FUCA2ENSG00000001036.92225.335103698.19840-0.7328024.1958022.37020HepG2HNRNPF
FUCA2ENSG00000001036.93031.394103553.05240-0.229103.129602.48750HepG2HNRNPU
FUCA2ENSG00000001036.92352.429401737.596800.437003.096601.78600HepG2HSPD1
FUCA2ENSG00000001036.92270.668803641.68100-0.6815014.2459012.73640HepG2IGF2BP1
FUCA2ENSG00000001036.95522.532203296.427500.744303.009301.98300HepG2IGF2BP3
FUCA2ENSG00000001036.93544.244302921.349300.278702.453701.39060HepG2LARP7
FUCA2ENSG00000001036.94947.841103747.468200.400803.236802.55880HepG2MATR3
FUCA2ENSG00000001036.93309.801902570.560900.364604.576503.55660HepG2MSI2
FUCA2ENSG00000001036.92936.280403393.00840-0.208602.474201.89310HepG2PCBP1
FUCA2ENSG00000001036.92241.466702968.88240-0.405502.247401.30930HepG2PCBP2
FUCA2ENSG00000001036.91277.788801814.46020-0.505907.377105.43760HepG2PKM
FUCA2ENSG00000001036.92676.479803169.04240-0.243702.811502.06900HepG2PPIL4
FUCA2ENSG00000001036.91740.852002413.72270-0.471509.287707.99080HepG2PRPF4
FUCA2ENSG00000001036.92556.152103452.34960-0.433607.285706.48100HepG2PTBP1
FUCA2ENSG00000001036.91992.938802756.28000-0.4678011.3754010.27180HepG2PUS1
FUCA2ENSG00000001036.92629.689503739.32780-0.507908.292207.29840HepG2QKI
FUCA2ENSG00000001036.94800.936402865.296300.744505.285404.32800HepG2RAVER1
FUCA2ENSG00000001036.93103.091403842.26930-0.308302.601602.07400HepG2NELFE
FUCA2ENSG00000001036.92880.394803578.30570-0.313003.860703.14910HepG2RECQL
FUCA2ENSG00000001036.92555.514203983.69690-0.6405010.321909.14610HepG2RPLP0
FUCA2ENSG00000001036.91942.552702814.12720-0.534703.442002.38860HepG2RPS10
FUCA2ENSG00000001036.91805.984502135.04280-0.241501.933601.41180HepG2RPS19
FUCA2ENSG00000001036.91590.203703248.85260-1.0307021.0365019.00270HepG2RPS2
FUCA2ENSG00000001036.92985.171302369.279600.333302.362301.62950HepG2RRP9
FUCA2ENSG00000001036.92384.264503164.16220-0.408309.713508.62020HepG2SAFB2
FUCA2ENSG00000001036.94089.765903071.261100.413102.755002.08210HepG2SF3A3
FUCA2ENSG00000001036.93677.732504575.58710-0.315107.848706.75830HepG2SLBP
FUCA2ENSG00000001036.94388.764003689.968000.250105.390004.54310HepG2SMN1
FUCA2ENSG00000001036.93781.788804880.53800-0.368009.264608.49600HepG2SRFBP1
FUCA2ENSG00000001036.93027.823503751.90050-0.309304.021003.47750HepG2SRSF1
FUCA2ENSG00000001036.93475.038804711.74850-0.4392011.063809.92630HepG2SRSF5
FUCA2ENSG00000001036.91874.675403633.31880-0.9546040.2051038.20090HepG2SRSF7
FUCA2ENSG00000001036.92326.471804237.47370-0.8651038.5760037.17920HepG2SSB
FUCA2ENSG00000001036.94590.846905358.68060-0.223104.461803.70760HepG2SUCLG1
FUCA2ENSG00000001036.94521.969803372.022900.423207.681706.82410HepG2TAF15
FUCA2ENSG00000001036.92646.295303098.78150-0.227702.104701.37340HepG2TIA1
FUCA2ENSG00000001036.91560.788403452.53030-1.1454039.3082037.82640HepG2TIAL1
FUCA2ENSG00000001036.93922.773204662.08020-0.249102.503101.67570HepG2TUFM
FUCA2ENSG00000001036.93330.726602716.662700.293902.483201.88600HepG2U2AF1
FUCA2ENSG00000001036.92252.193104934.60820-1.1316022.5736020.24430HepG2UBE2L3
FUCA2ENSG00000001036.93468.775802723.730200.348707.143706.10840HepG2UPF1
FUCA2ENSG00000001036.93486.520502629.668000.406808.962407.98480HepG2UTP3
FUCA2ENSG00000001036.92373.875603042.43980-0.358002.784602.05770HepG2XRN2
FUCA2ENSG00000001036.93822.513902995.594300.351609.213108.36420HepG2ZNF622
FUCA2ENSG00000001036.92124.844601853.653500.196902.018001.51880K562AGGF1
FUCA2ENSG00000001036.92467.774301928.795600.355403.360702.63970K562AKAP8L
FUCA2ENSG00000001036.92280.329903238.90110-0.506304.458103.74610K562AQR
FUCA2ENSG00000001036.92458.931302023.742800.280903.181002.19730K562ATP5C1
FUCA2ENSG00000001036.93109.313404657.32460-0.5829011.422409.52540K562CELF1
FUCA2ENSG00000001036.91303.498801730.88250-0.409102.908401.97380K562EFTUD2
FUCA2ENSG00000001036.91165.063101697.81330-0.543306.445605.20050K562EIF4A3
FUCA2ENSG00000001036.92110.644801765.649900.257402.834302.22320K562FXR1
FUCA2ENSG00000001036.91180.027901576.00780-0.417502.616301.84240K562GPKOW
FUCA2ENSG00000001036.94156.696003428.380200.277802.776402.01930K562GRSF1
FUCA2ENSG00000001036.91471.349001790.34440-0.283102.269101.72100K562HNRNPC
FUCA2ENSG00000001036.92225.791001722.352200.369802.718101.79600K562HNRNPM
FUCA2ENSG00000001036.93572.749502838.802500.331702.990102.16440K562HSPD1
FUCA2ENSG00000001036.91796.403502231.40160-0.312802.807301.96130K562MAGOH
FUCA2ENSG00000001036.92184.550101607.316600.442602.830501.93660K562NAA15
FUCA2ENSG00000001036.91514.512901985.54450-0.390703.599702.48710K562PCBP2
FUCA2ENSG00000001036.91580.483101969.33290-0.317302.168301.43180K562PCBP3
FUCA2ENSG00000001036.91277.022101605.17570-0.329902.526501.66900K562PSIP1
FUCA2ENSG00000001036.93659.307704307.61150-0.235302.524901.60630K562PUM2
FUCA2ENSG00000001036.92961.340401912.942600.630408.293207.40110K562PUS1
FUCA2ENSG00000001036.92499.992601863.786000.423606.303805.43380K562RBM15
FUCA2ENSG00000001036.91520.764502079.19070-0.451204.588003.47490K562RBM22
FUCA2ENSG00000001036.92528.400502166.022300.223102.368901.60850K562SF3A3
FUCA2ENSG00000001036.91464.260401901.23320-0.376804.351403.27180K562SF3B4
FUCA2ENSG00000001036.91068.927601388.09460-0.376903.060701.96920K562SRFBP1
FUCA2ENSG00000001036.91266.177502125.15830-0.7471012.0837010.60280K562SRSF1
FUCA2ENSG00000001036.9928.525601249.04700-0.427804.028502.72470K562SRSF4
FUCA2ENSG00000001036.91514.381702006.82420-0.406203.863502.58540K562SRSF5
FUCA2ENSG00000001036.91820.834901515.102800.265102.351501.59420K562SYNCRIP
FUCA2ENSG00000001036.91552.775102074.82750-0.418104.022703.00870K562TIA1
FUCA2ENSG00000001036.91052.087901543.94300-0.553405.183903.86180K562TIAL1
FUCA2ENSG00000001036.91507.218002035.55350-0.433504.414702.97890K562TRA2A
FUCA2ENSG00000001036.92250.541301830.333000.298103.086402.23770K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FUCA2 is not available on ENCORE database.





12 RBPs can affect the splicing of FUCA2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFUCA2ENSG00000001036.9chr6-143823491143823702143823068143823259143828373143828561-0.122000.000000.00000excludedK562SRSF1
SEFUCA2ENSG00000001036.9chr6-143825049143825222143823491143823702143828373143828561-0.088000.000230.00622excludedK562SF3B4
SEFUCA2ENSG00000001036.9chr6-1438250491438252221438230681438232591438283731438285610.670000.000000.00007includedHepG2U2AF2
SEFUCA2ENSG00000001036.9chr6-143825049143825389143823068143823259143828373143828561-0.072000.000010.00274excludedHepG2SRSF7
SEFUCA2ENSG00000001036.9chr6-1438250491438253891438230681438232591438283731438285610.061000.000650.07342includedHepG2HNRNPUL1
SEFUCA2ENSG00000001036.9chr6-143825303143825389143825049143825222143828373143828561-0.097000.000000.00000excludedHepG2SRSF1
SEFUCA2ENSG00000001036.9chr6-143825049143825389143823068143823259143828373143828561-0.066000.000000.00001excludedHepG2SF3A3
SEFUCA2ENSG00000001036.9chr6-143823491143823702143823068143823259143828373143828561-0.071000.000010.00056excludedK562TARDBP
SEFUCA2ENSG00000001036.9chr6-143823491143823702143823068143823259143828373143828561-0.052000.000090.02854excludedK562SAFB
A3SSFUCA2ENSG00000001036.9chr6-143825049143825389143825049143825222143828373143828561-0.056000.000000.00000shorterHepG2SRSF1
MXEFUCA2ENSG00000001036.9chr6-1438234911438237021438250491438252221438230681438232591438283731438285610.052000.000000.000001includedHepG2SRSF1
MXEFUCA2ENSG00000001036.9chr6-1438234911438237021438250491438253891438230681438232591438283731438285610.089000.000020.001011includedK562DROSHA
MXEFUCA2ENSG00000001036.9chr6-143823068143823259143825049143825389143818525143818634143828373143828561-0.098000.007530.089162includedK562SRSF1
MXEFUCA2ENSG00000001036.9chr6-143823491143823702143825049143825389143823068143823259143828373143828561-0.094000.001160.036572includedHepG2XRN2
MXEFUCA2ENSG00000001036.9chr6-1438234911438236971438250491438253891438230681438232591438283731438285610.057000.000270.013841includedK562SBDS
MXEFUCA2ENSG00000001036.9chr6-1438234911438237021438250491438253891438230681438232591438283731438285610.057000.000260.013691includedK562SBDS
MXEFUCA2ENSG00000001036.9chr6-1438234911438236971438250491438253891438230681438232591438283731438285610.073000.001160.089081includedK562NPM1
MXEFUCA2ENSG00000001036.9chr6-1438234911438237021438250491438253891438230681438232591438283731438285610.074000.001150.089081includedK562NPM1
MXEFUCA2ENSG00000001036.9chr6-1438234911438237021438250491438253891438230681438232591438283731438285610.104000.000000.000221includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FUCA2 is not avaliable on ENCORE database.