TRA2A

TRA2A protein has 2,518 RNA targets:

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RBP	Chr	Start	End	Strand	log2(fold change)	-log(p-value)	Cell Line	Matched Gene	Matched Area
TRA2A	chr19	10791938	10792011	+	4.06353	14.64610	HepG2	ILF3	3'-UTR,CDS,intron-Proximal
TRA2A	chr7	44524609	44524861	-	5.19043	10.04362	K562	NUDCD3	CDS,intron-Distal,intron-Proximal
TRA2A	chr17	48821143	48821171	+	4.20164	13.49854	K562	LUC7L3	3'-UTR,CDS
TRA2A	chr1	93307321	93307334	+	3.91208	22.71783	HepG2	RPL5	CDS,intron-Proximal
TRA2A	chr14	24606728	24606775	+	3.56353	3.81194	K562	PSME1	5'-UTR,CDS,intron-Proximal
TRA2A	chr1	29475228	29475373	-	5.62997	8.86368	HepG2	SRSF4	3'-UTR,CDS,intron-Distal
TRA2A	chr12	104332145	104332157	+	4.55013	68.52540	HepG2	HSP90B1	CDS
TRA2A	chr2	233421133	233421241	+	3.64527	3.62913	HepG2	EIF4E2	CDS,intron-Proximal
TRA2A	chr2	232329136	232329183	-	4.30141	19.34700	K562	NCL	5'-UTR,intron-Distal,intron-Proximal
TRA2A	chr5	71491971	71492115	+	4.40164	12.93035	K562	MAP1B	CDS
TRA2A	chr7	134635149	134635219	+	3.77003	4.42173	HepG2	CALD1	3'-UTR,CDS
TRA2A	chr6	44218122	44218196	+	6.98449	400.00000	HepG2	HSP90AB1	CDS
TRA2A	chr4	73968168	73968256	-	6.06463	8.56700	HepG2	ANKRD17	3'-UTR,CDS,intron-Distal,intron-Proximal
TRA2A	chr12	95869880	95869945	+	4.14274	3.06106	HepG2	METAP2	CDS,intron-Distal,intron-Proximal
TRA2A	chr5	33445444	33445477	+	3.34114	8.53964	K562	TARS	3'-UTR,5'-UTR,CDS
TRA2A	chr1	109617613	109617688	-	4.93802	6.46081	K562	TAF13	CDS,intron-Distal,intron-Proximal
TRA2A	chr14	23532646	23532787	-	3.88194	14.74560	HepG2	ACIN1	CDS,intron-Distal,intron-Proximal
TRA2A	chr2	232325197	232325235	-	5.25451	31.14416	K562	NCL	CDS,intron-Distal
TRA2A	chr16	89350332	89350402	-	3.77426	9.90330	K562	ANKRD11	3'-UTR,CDS,intron-Distal
TRA2A	chrX	132826498	132826523	-	4.23526	12.75058	HepG2	GPC3	CDS,intron-Distal,intron-Proximal
TRA2A	chr15	63986168	63986263	-	3.60639	5.34040	K562	HERC1	CDS,intron-Distal
TRA2A	chr2	232328013	232328026	-	4.44543	16.21102	K562	NCL	5'-UTR,CDS,intron-Distal
TRA2A	chr1	90492929	90493089	+	4.54026	15.95327	K562	ZNF326	3'-UTR,CDS
TRA2A	chr3	154033882	154033953	-	3.06189	3.68901	K562	DHX36	5'-UTR,CDS,intron-Distal,intron-Proximal
TRA2A	chr6	4042724	4042803	+	4.02774	3.87318	HepG2	PRPF4B	CDS,intron-Proximal
TRA2A	chr12	123001815	123001884	-	3.54217	11.31638	K562	RSRC2	3'-UTR,5'-UTR,CDS,intron-Distal
TRA2A	chr2	232577223	232577226	+	4.02377	15.04844	HepG2	PTMA	3'-UTR,CDS
TRA2A	chr2	99953972	99954036	+	4.56169	10.44501	K562	EIF5B	5'-UTR,CDS
TRA2A	chr2	232576603	232576655	+	4.49004	24.70270	HepG2	PTMA	3'-UTR,CDS
TRA2A	chr5	137500398	137500458	-	3.57810	3.81194	K562	BRD8	3'-UTR,CDS,intron-Distal,intron-Proximal
TRA2A	chr20	30382300	30382346	+	3.03517	3.21681	K562	TPX2	CDS
TRA2A	chr5	32395257	32395350	-	5.77268	11.32317	HepG2	ZFR	CDS,intron-Distal,intron-Proximal
TRA2A	chr15	85085399	85085524	-	4.73303	4.39935	HepG2	UBE2Q2P1	intron-Distal,intron-Proximal
TRA2A	chr1	46073082	46073180	+	4.97222	4.69573	HepG2	NASP	3'-UTR,CDS,intron-Distal
TRA2A	chr3	9477479	9477591	+	3.44040	7.66549	K562	SETD5	3'-UTR,CDS,intron-Proximal
TRA2A	chr11	118888710	118888750	-	3.06960	9.75995	HepG2	RPS25	CDS,intron-Distal
TRA2A	chr2	11338665	11338714	-	4.02774	6.56585	HepG2	ROCK2	CDS,intron-Distal,intron-Proximal
TRA2A	chr8	17761194	17761242	-	3.04707	4.91414	HepG2	FGL1	intron-Distal
TRA2A	chr6	18249869	18249945	-	5.01123	4.99268	HepG2	DEK	CDS,intron-Distal,intron-Proximal
TRA2A	chr15	40488838	40488890	+	4.54866	3.22063	K562	BUB1B	3'-UTR,CDS
TRA2A	chr2	172546679	172546771	+	3.81126	5.28818	HepG2	DYNC1I2	CDS
TRA2A	chr2	187367237	187367272	+	4.42246	3.84574	HepG2	ZC3H15	CDS,intron-Distal
TRA2A	chr21	34918546	34918684	+	3.65030	5.88700	HepG2	SON	CDS
TRA2A	chr3	47163182	47163263	-	4.09239	3.75533	K562	SETD2	CDS,intron-Distal
TRA2A	chr7	127975940	127975986	-	4.53730	4.83264	K562	RBM28	CDS,intron-Distal
TRA2A	chr17	48821121	48821173	+	3.69662	10.25533	HepG2	LUC7L3	3'-UTR,CDS,intron-Proximal
TRA2A	chr3	167750307	167750481	-	4.38840	9.07767	K562	GOLIM4	CDS,intron-Distal,intron-Proximal
TRA2A	chr11	47753661	47753758	-	3.12285	3.45202	K562	FNBP4	intron-Distal,intron-Proximal
TRA2A	chr1	171501796	171501899	+	4.70493	16.76734	K562	PRRC2C	CDS
TRA2A	chr16	89351852	89351903	-	3.83054	6.63718	K562	ANKRD11	3'-UTR,CDS,intron-Distal
TRA2A	chr11	108594007	108594145	+	4.09239	3.75533	K562	DDX10	CDS
TRA2A	chr5	71491066	71491142	+	5.11330	7.44299	K562	MAP1B	3'-UTR,CDS
TRA2A	chr20	17617342	17617372	-	3.31126	6.10074	HepG2	RRBP1	CDS,intron-Distal
TRA2A	chr17	48797116	48797185	+	3.35906	9.79661	K562	LUC7L3	5'-UTR,CDS
TRA2A	chr10	129906915	129907033	-	3.44460	7.55017	K562	MKI67	CDS,intron-Distal
TRA2A	chr2	187368807	187368962	+	3.36653	9.81412	HepG2	ZC3H15	3'-UTR,CDS,intron-Proximal
TRA2A	chr3	37363247	37363301	+	4.61724	9.07767	K562	GOLGA4	CDS,intron-Distal
TRA2A	chr10	70525643	70525662	+	5.52904	9.19288	K562	CCAR1	3'-UTR,CDS,intron-Proximal
TRA2A	chr6	32946085	32946136	+	3.21706	3.68901	K562	BRD2	3'-UTR,CDS
TRA2A	chr17	39974733	39974785	+	3.46326	5.34657	HepG2	FKBP10	3'-UTR,CDS,intron-Proximal
TRA2A	chr10	76781827	76781959	+	4.97015	7.44299	K562	KAT6B	CDS
TRA2A	chr14	56114742	56114838	+	3.79505	3.33003	HepG2	KTN1	CDS,intron-Proximal
TRA2A	chr21	40883608	40883693	+	4.99242	8.63026	K562	SH3BGR	CDS,intron-Distal
TRA2A	chr21	34143712	34143841	-	4.07618	9.03933	K562	PAXBP1	CDS,intron-Distal
TRA2A	chr3	37367341	37367409	+	4.81276	15.95327	K562	GOLGA4	CDS,intron-Distal
TRA2A	chr8	124383148	124383213	-	4.39268	13.28227	K562	ATAD2	5'-UTR,CDS,intron-Distal
TRA2A	chr9	138839734	138839752	-	3.15727	3.31144	K562	UBAC1	CDS,intron-Distal,intron-Proximal
TRA2A	chr14	102551036	102551066	-	3.79304	16.45291	K562	HSP90AA1	5'-UTR,CDS,intron-Distal
TRA2A	chr21	33982147	33982166	-	3.20237	3.31144	K562	C21orf59, AP000275.65	CDS,intron-Distal,intron-Proximal
TRA2A	chr17	27002083	27002156	+	3.15338	4.80353	K562	SUPT6H	CDS
TRA2A	chr22	22658305	22658381	+	5.33282	9.47372	K562	LL22NC03-80A10.6, BMS1P20	intron-Proximal
TRA2A	chr15	59191670	59191721	-	3.92610	3.22063	K562	SLTM	CDS,intron-Distal,intron-Proximal
TRA2A	chr9	100777676	100777689	+	5.35533	31.14191	K562	ANP32B	CDS
TRA2A	chr1	205689628	205689726	-	3.07810	6.77762	HepG2	NUCKS1	CDS,intron-Distal,intron-Proximal
TRA2A	chr2	63221025	63221092	+	3.51652	5.77763	HepG2	EHBP1	CDS
TRA2A	chr6	30546277	30546369	+	5.14527	5.88588	HepG2	ABCF1	CDS,intron-Distal,intron-Proximal
TRA2A	chr11	62287036	62287083	-	3.78754	6.62350	K562	AHNAK	CDS,intron-Distal
TRA2A	chr1	24995750	24995814	+	3.00686	3.29841	K562	SRRM1	CDS
TRA2A	chr1	35653572	35653578	-	4.71858	18.71245	K562	SFPQ	CDS,intron-Distal,intron-Proximal
TRA2A	chr7	100482398	100482452	+	5.62926	9.18880	K562	SRRT	CDS
TRA2A	chr9	131456312	131456322	+	5.04423	27.74012	K562	SET	CDS,intron-Proximal
TRA2A	chr2	170667458	170667530	+	3.99383	7.71865	HepG2	SSB	CDS
TRA2A	chr2	232324973	232325004	-	4.17656	14.76924	K562	NCL	CDS,intron-Distal
TRA2A	chr19	49377415	49377458	+	3.48735	8.25058	K562	PPP1R15A	CDS
TRA2A	chr21	34142230	34142254	-	3.84114	3.22063	K562	PAXBP1	CDS,intron-Distal,intron-Proximal
TRA2A	chrX	118971924	118972000	-	5.69320	11.46752	K562	UPF3B	CDS,intron-Distal
TRA2A	chr9	131456239	131456294	+	4.57774	53.86857	K562	SET	CDS
TRA2A	chr12	123003383	123003406	-	3.04286	4.24665	K562	RSRC2	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal
TRA2A	chr14	24606727	24606773	+	4.44500	12.52852	HepG2	PSME1	5'-UTR,CDS,intron-Proximal
TRA2A	chr10	43292026	43292098	+	3.45271	5.65663	K562	BMS1	CDS
TRA2A	chr1	70710393	70710492	+	3.91393	12.47292	K562	SRSF11	CDS
TRA2A	chr12	103249015	103249113	-	3.40437	5.56602	HepG2	PAH	CDS,intron-Distal,intron-Proximal
TRA2A	chrX	154005070	154005122	+	4.81973	7.85054	HepG2	DKC1	CDS,intron-Proximal
TRA2A	chr14	73569913	73570042	+	4.06353	8.51323	K562	RBM25	3'-UTR,CDS
TRA2A	chr12	56583211	56583292	-	3.28490	3.31144	K562	RP11-977G19.5, SMARCC2	5'-UTR,CDS,intron-Distal,intron-Proximal
TRA2A	chr1	16255216	16255249	+	3.74481	3.22063	K562	SPEN	CDS
TRA2A	chr1	150198939	150199006	-	4.37938	12.30725	K562	ANP32E	3'-UTR,CDS,intron-Distal,intron-Proximal
TRA2A	chr6	4042731	4042799	+	4.51166	3.48757	K562	PRPF4B	CDS
TRA2A	chr15	91523509	91523561	-	3.82441	4.06415	K562	PRC1	CDS,intron-Distal,intron-Proximal
TRA2A	chr12	56997303	56997408	-	3.69403	3.60082	HepG2	BAZ2A	CDS,intron-Distal,intron-Proximal

44 proteins are bound to TRA2A RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	23561335	23561374	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.63011	11.76397	HepG2	BCLAF1
chr7	23544657	23544705	-	3'-UTR,intron-Distal,intron-Proximal	3.72729	10.63132	K562	ZC3H11A
chr7	23545072	23545121	-	3'-UTR,intron-Distal,intron-Proximal	4.35620	14.46121	K562	APOBEC3C
chr7	23556081	23556158	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.36492	5.01301	K562	U2AF2
chr7	23561367	23561383	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.16635	8.30608	K562	YBX3
chr7	23561357	23561398	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.28190	5.39266	HepG2	GRWD1
chr7	23561326	23561387	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.85050	4.51003	HepG2	PPIG
chr7	23556114	23556148	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.77586	6.62597	HepG2	GRWD1
chr7	23561339	23561367	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.66358	13.87134	K562	YBX3
chr7	23545157	23545198	-	3'-UTR,CDS,intron-Distal	3.92694	4.82292	K562	U2AF2
chr7	23556100	23556149	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.69700	4.35148	K562	U2AF1
chr7	23545062	23545119	-	3'-UTR,intron-Distal,intron-Proximal	3.21265	31.32533	K562	PABPC4
chr7	23545164	23545203	-	3'-UTR,CDS,intron-Distal	3.32389	4.65237	HepG2	U2AF2
chr7	23545053	23545121	-	3'-UTR,intron-Distal,intron-Proximal	3.17720	28.93126	K562	ZC3H11A
chr7	23544696	23544766	-	3'-UTR,intron-Distal,intron-Proximal	4.19852	3.64914	K562	APOBEC3C
chr7	23561336	23561386	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.91600	3.86058	K562	GRWD1
chr7	23556012	23556123	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.01839	14.58878	K562	UCHL5
chr7	23561796	23561879	-	5'-UTR,intron-Distal,intron-Proximal	3.95805	15.61418	K562	ZNF622
chr7	23570778	23570984	-	5'-UTR,intron-Distal,intron-Proximal	3.61733	19.82246	K562	NONO
chr7	23561957	23562041	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.71891	18.88233	HepG2	BCLAF1
chr7	23561921	23562039	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.98048	5.58552	K562	CPSF6
chr7	23561709	23561785	-	5'-UTR,intron-Distal,intron-Proximal	5.21607	30.99460	HepG2	BCLAF1
chr7	23561641	23561779	-	5'-UTR,intron-Distal,intron-Proximal	4.09455	3.60944	K562	TARDBP
chr7	23561962	23562045	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.19107	13.52620	HepG2	TRA2A
chr7	23561412	23561467	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.08581	7.13383	K562	U2AF1
chr7	23561740	23561873	-	5'-UTR,intron-Distal,intron-Proximal	4.12030	6.25005	HepG2	ZNF800
chr7	23561778	23561875	-	5'-UTR,intron-Distal,intron-Proximal	4.88223	17.20430	HepG2	TRA2A
chr7	23571514	23571548	-	5'-UTR,intron-Distal	4.16315	6.37184	K562	RBM15
chr7	23561706	23561773	-	5'-UTR,intron-Distal,intron-Proximal	3.28874	5.07370	K562	CPSF6
chr7	23571503	23571552	-	5'-UTR,intron-Distal	4.97299	41.89640	HepG2	NCBP2
chr7	23561697	23561762	-	5'-UTR,intron-Distal,intron-Proximal	4.30828	25.39992	K562	AGGF1
chr7	23561729	23561778	-	5'-UTR,intron-Distal,intron-Proximal	4.23748	6.37218	HepG2	TRA2A
chr7	23571376	23571468	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.31399	8.02669	K562	SRSF1
chr7	23571504	23571552	-	5'-UTR,intron-Distal	3.57848	3.66170	HepG2	DDX3X
chr7	23561411	23561479	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.02317	18.97662	K562	AQR
chr7	23571552	23571599	-	5'-UTR,intron-Distal,intron-Proximal	4.31888	25.41674	K562	DDX3X
chr7	23561896	23561949	-	5'-UTR,intron-Distal,intron-Proximal	3.41538	5.90136	HepG2	AGGF1
chr7	23561998	23562060	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.68509	6.48906	K562	U2AF2
chr7	23561700	23561760	-	5'-UTR,intron-Distal,intron-Proximal	3.07606	3.29983	HepG2	PRPF8
chr7	23571516	23571553	-	5'-UTR,intron-Distal	3.67019	3.03347	K562	NCBP2
chr7	23571552	23571599	-	5'-UTR,intron-Distal,intron-Proximal	6.05319	61.40869	HepG2	NCBP2
chr7	23571513	23571555	-	5'-UTR,intron-Distal	3.03471	5.46896	HepG2	NKRF
chr7	23561422	23561509	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.87549	29.73945	K562	SF3B4
chr7	23561803	23561847	-	5'-UTR,intron-Distal	3.25974	6.08644	HepG2	BUD13
chr7	23561982	23562047	-	5'-UTR,CDS,intron-Distal	3.08889	4.92646	HepG2	BUD13
chr7	23571531	23571551	-	5'-UTR,intron-Distal	3.60616	3.52118	K562	XRCC6
chr7	23561721	23561803	-	5'-UTR,intron-Distal,intron-Proximal	3.81606	10.14158	HepG2	BUD13
chr7	23561698	23561784	-	5'-UTR,intron-Distal,intron-Proximal	5.41725	23.53093	HepG2	AGGF1
chr7	23561742	23561796	-	5'-UTR,intron-Distal,intron-Proximal	3.95270	12.57116	K562	ZNF622
chr7	23561435	23561483	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.05208	4.63153	HepG2	AQR
chr7	23561799	23561928	-	5'-UTR,intron-Distal,intron-Proximal	4.14780	9.79611	K562	SAFB2
chr7	23571349	23571459	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.85373	22.85072	K562	EFTUD2
chr7	23571548	23571597	-	5'-UTR,intron-Distal,intron-Proximal	4.80663	15.93951	K562	RBM15
chr7	23571571	23571599	-	5'-UTR,intron-Distal,intron-Proximal	5.68633	5.94871	K562	NCBP2
chr7	23570878	23570956	-	5'-UTR,intron-Distal,intron-Proximal	4.12451	19.93764	HepG2	EFTUD2
chr7	23571368	23571460	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.98237	37.30490	HepG2	EFTUD2
chr7	23561704	23561764	-	5'-UTR,intron-Distal,intron-Proximal	3.76261	11.78397	K562	EFTUD2
chr7	23571558	23571571	-	5'-UTR,intron-Distal	5.68633	5.94871	K562	NCBP2
chr7	23561773	23561883	-	5'-UTR,intron-Distal,intron-Proximal	3.99147	12.31158	K562	CPSF6
chr7	23561901	23562046	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.25655	10.88964	K562	TRA2A
chr7	23571347	23571448	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.63237	37.33746	HepG2	PRPF8
chr7	23571469	23571508	-	5'-UTR,intron-Distal	3.36120	18.11740	K562	DDX3X
chr7	23561802	23561843	-	5'-UTR,intron-Distal	3.39150	9.97515	K562	AGGF1
chr7	23571552	23571599	-	5'-UTR,intron-Distal,intron-Proximal	5.29568	8.90399	HepG2	DDX3X
chr7	23561821	23561884	-	5'-UTR,intron-Distal,intron-Proximal	4.31005	23.18255	HepG2	BCLAF1
chr7	23571500	23571541	-	5'-UTR,intron-Distal	6.91057	89.29227	HepG2	XPO5
chr7	23571510	23571555	-	5'-UTR,intron-Distal	4.52917	14.41453	K562	GEMIN5
chr7	23571543	23571589	-	5'-UTR,intron-Distal	6.83387	85.17774	HepG2	XPO5
chr7	23571353	23571416	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.52871	11.38445	K562	PRPF8
chr7	23570843	23570953	-	5'-UTR,intron-Distal,intron-Proximal	3.57977	10.36827	K562	U2AF1
chr7	23561725	23561876	-	5'-UTR,intron-Distal,intron-Proximal	5.69136	22.32507	K562	TRA2A
chr7	23561843	23561882	-	5'-UTR,intron-Distal,intron-Proximal	3.25932	11.34572	K562	AGGF1
chr7	23571508	23571552	-	5'-UTR,intron-Distal	4.42590	40.98259	K562	DDX3X
chr7	23547047	23547111	-	CDS,intron-Distal	4.18782	9.72888	HepG2	GRWD1
chr7	23552512	23552539	-	CDS,intron-Distal,intron-Proximal	3.29764	3.34848	HepG2	PPIG
chr7	23552582	23552620	-	CDS,intron-Distal,intron-Proximal	4.57662	5.17013	K562	RBM15
chr7	23545755	23545845	-	CDS,intron-Distal,intron-Proximal	4.06626	26.23535	K562	DDX24
chr7	23545821	23545846	-	CDS,intron-Distal,intron-Proximal	4.29377	11.64153	HepG2	BCLAF1
chr7	23552573	23552646	-	CDS,intron-Distal,intron-Proximal	4.22103	9.94686	HepG2	GRWD1
chr7	23552563	23552626	-	CDS,intron-Distal,intron-Proximal	4.42708	15.55920	HepG2	BCLAF1
chr7	23545767	23545837	-	CDS,intron-Distal,intron-Proximal	3.12490	9.15761	K562	UCHL5
chr7	23552660	23552702	-	CDS,intron-Distal,intron-Proximal	3.18667	8.77286	K562	UCHL5
chr7	23555981	23556012	-	CDS,intron-Distal,intron-Proximal	3.70601	8.45049	K562	UCHL5
chr7	23555982	23556011	-	CDS,intron-Distal,intron-Proximal	3.26410	6.59473	HepG2	GRWD1
chr7	23545753	23545845	-	CDS,intron-Distal,intron-Proximal	3.51285	11.18518	K562	GPKOW
chr7	23545374	23545396	-	CDS,intron-Distal	3.50434	5.69345	HepG2	BCLAF1
chr7	23545762	23545850	-	CDS,intron-Distal,intron-Proximal	3.70089	9.71090	HepG2	PPIG
chr7	23545762	23545821	-	CDS,intron-Distal	4.83681	23.15230	HepG2	BCLAF1
chr7	23545393	23545435	-	CDS,intron-Distal,intron-Proximal	3.32097	3.64063	K562	U2AF1
chr7	23545777	23545848	-	CDS,intron-Distal,intron-Proximal	3.81450	3.32907	K562	SRSF7
chr7	23547052	23547102	-	CDS,intron-Distal	4.03461	12.38345	HepG2	BCLAF1
chr7	23552483	23552530	-	CDS,intron-Distal,intron-Proximal	3.52136	5.37697	K562	EFTUD2
chr7	23545797	23545884	-	CDS,intron-Distal,intron-Proximal	3.42057	7.68851	HepG2	AQR
chr7	23545903	23545932	-	intron-Distal,intron-Proximal	3.99320	4.69223	K562	SF3B4
chr7	23571278	23571351	-	intron-Distal,intron-Proximal	3.09190	3.60060	K562	XRN2
chr7	23545318	23545363	-	intron-Distal,intron-Proximal	3.71744	5.75231	K562	AQR
chr7	23565250	23565283	-	intron-Distal	5.12366	14.59270	K562	LIN28B
chr7	23551626	23551658	-	intron-Distal	4.50703	3.24603	K562	KHSRP
chr7	23551572	23551614	-	intron-Distal	5.31850	5.62025	K562	KHSRP
chr7	23565236	23565246	-	intron-Distal	3.97553	7.24705	K562	LIN28B
chr7	23555877	23555913	-	intron-Distal,intron-Proximal	3.41962	3.18246	K562	PRPF8
chr7	23570553	23570661	-	intron-Distal	3.67018	17.89238	HepG2	PTBP1
chr7	23568859	23568880	-	intron-Distal	3.11797	4.89571	K562	KHDRBS1
chr7	23561167	23561199	-	intron-Distal	4.99691	4.85612	K562	PRPF8
chr7	23570559	23570611	-	intron-Distal	4.15075	12.98238	K562	PTBP1
chr7	23551658	23551691	-	intron-Distal	3.35503	4.74253	K562	KHSRP
chr7	23551534	23551567	-	intron-Distal	3.75807	5.62143	K562	KHSRP
chr7	23565283	23565296	-	intron-Distal	4.24514	5.61746	K562	LIN28B
chr7	23561707	23561749	-	intron-Distal,intron-Proximal	3.75849	6.28932	HepG2	AQR
chr7	23555901	23555961	-	intron-Distal,intron-Proximal	4.24759	5.63763	K562	AQR
chr7	23561532	23561618	-	intron-Distal,intron-Proximal	3.46583	5.94773	HepG2	QKI
chr7	23561565	23561598	-	intron-Distal	3.56387	22.30909	K562	AGGF1
chr7	23547267	23547329	-	intron-Distal	4.46622	4.10688	K562	KHSRP
chr7	23561536	23561565	-	intron-Distal,intron-Proximal	3.01151	11.03961	K562	AGGF1
chr7	23571003	23571102	-	intron-Distal	3.15773	3.83977	K562	XRN2
chr7	23571109	23571145	-	intron-Distal	3.42106	5.61209	HepG2	HNRNPK
chr7	23560034	23560088	-	intron-Distal	3.76757	3.00956	K562	HNRNPA1
chr7	23569096	23569180	-	intron-Distal	3.69217	3.03357	HepG2	HNRNPC
chr7	23556166	23556195	-	intron-Distal,intron-Proximal	4.74501	19.11673	K562	SF3B4
chr7	23561598	23561679	-	intron-Distal,intron-Proximal	3.04950	17.51163	K562	AGGF1
chr7	23571281	23571368	-	intron-Distal,intron-Proximal	5.38773	84.61352	HepG2	EFTUD2
chr7	23571246	23571349	-	intron-Distal,intron-Proximal	3.52257	27.52947	K562	EFTUD2
chr7	23545672	23545753	-	intron-Distal,intron-Proximal	3.42243	4.96160	K562	KHSRP
chr7	23571249	23571334	-	intron-Distal,intron-Proximal	3.27084	9.68288	K562	NONO
chr7	23571239	23571275	-	intron-Distal	4.20220	11.04858	HepG2	EFTUD2
chr7	23568098	23568221	-	intron-Distal	3.13801	3.67621	HepG2	HNRNPU
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

The TRA2A protein binds to its own RNA.

RBP	Chr	Start	End	Strand	log2(fold change)	-log(p-value)	Cell Line	Matched Gene	Matched Area
TRA2A	chr7	23561962	23562045	-	6.19107	13.52620	HepG2	TRA2A	5'-UTR,CDS,intron-Distal,intron-Proximal
TRA2A	chr7	23561778	23561875	-	4.88223	17.20430	HepG2	TRA2A	5'-UTR,intron-Distal,intron-Proximal
TRA2A	chr7	23561729	23561778	-	4.23748	6.37218	HepG2	TRA2A	5'-UTR,intron-Distal,intron-Proximal
TRA2A	chr7	23561901	23562046	-	4.25655	10.88964	K562	TRA2A	5'-UTR,CDS,intron-Distal,intron-Proximal
TRA2A	chr7	23561725	23561876	-	5.69136	22.32507	K562	TRA2A	5'-UTR,intron-Distal,intron-Proximal

3,309 differentially expressed genes after Knockdown/Knockout TRA2A protein :

Only display 100 entries as example. Please click "View All" button to see all 3,309 entries.     

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Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LASP1	ENSG00000002834.13	3870.45520	6003.58570	-0.63330	5.23340	3.25400	HepG2	TRA2A
ACSM3	ENSG00000005187.7	1355.01190	966.12610	0.48790	2.78920	1.31390	HepG2	TRA2A
FAM214B	ENSG00000005238.15	50.12600	138.13610	-1.46250	5.89240	3.79270	HepG2	TRA2A
FBXL3	ENSG00000005812.6	257.70550	475.98840	-0.88520	5.62580	3.57070	HepG2	TRA2A
ASB4	ENSG00000005981.8	271.73360	75.19830	1.85330	13.73340	10.78150	HepG2	TRA2A
TNFRSF12A	ENSG00000006327.9	566.60110	378.36840	0.58240	3.06450	1.51850	HepG2	TRA2A
RALA	ENSG00000006451.3	903.06400	635.52700	0.50680	2.78770	1.31290	HepG2	TRA2A
UBR7	ENSG00000012963.9	440.08440	668.75870	-0.60370	3.38090	1.76590	HepG2	TRA2A
CLDN11	ENSG00000013297.6	322.95680	191.24020	0.75590	3.59180	1.92310	HepG2	TRA2A
DPEP1	ENSG00000015413.5	291.77810	116.09590	1.32950	3.67230	1.98940	HepG2	TRA2A
ATP1A2	ENSG00000018625.10	39.16570	6.61560	2.56550	4.54380	2.69150	HepG2	TRA2A
CYP24A1	ENSG00000019186.5	661.18490	334.91460	0.98120	3.90550	2.17110	HepG2	TRA2A
CD74	ENSG00000019582.10	2125.74500	1400.62860	0.60180	3.34850	1.74280	HepG2	TRA2A
CPS1	ENSG00000021826.10	988.23880	1420.81020	-0.52380	3.22040	1.63600	HepG2	TRA2A
GCLM	ENSG00000023909.5	559.14120	362.75890	0.62410	3.38090	1.76590	HepG2	TRA2A
TOMM34	ENSG00000025772.7	1273.23150	907.94630	0.48770	2.84010	1.35180	HepG2	TRA2A
VCAN	ENSG00000038427.11	5239.37950	2925.48660	0.84060	8.69290	6.23990	HepG2	TRA2A
PHKA2	ENSG00000044446.7	2086.24280	3582.92300	-0.78020	7.40320	5.08550	HepG2	TRA2A
COL9A2	ENSG00000049089.9	1173.51310	708.05500	0.72880	4.13130	2.36000	HepG2	TRA2A
NFE2L3	ENSG00000050344.8	939.26630	431.41570	1.12240	8.67650	6.22880	HepG2	TRA2A
PIK3CB	ENSG00000051382.4	567.84080	1137.86980	-1.00280	5.26960	3.28660	HepG2	TRA2A
GINM1	ENSG00000055211.8	1014.17690	677.21190	0.58250	3.56870	1.90600	HepG2	TRA2A
ITIH1	ENSG00000055957.6	172.03020	369.98940	-1.10480	7.05800	4.78460	HepG2	TRA2A
IL17RB	ENSG00000056736.5	1618.95410	2638.76720	-0.70480	5.95130	3.84210	HepG2	TRA2A
BCAT1	ENSG00000060982.10	2152.94120	998.48670	1.10840	12.79140	9.96860	HepG2	TRA2A
CASP8	ENSG00000064012.17	1362.44370	816.54650	0.73850	5.74490	3.66810	HepG2	TRA2A
NGFR	ENSG00000064300.4	304.24000	80.00200	1.92700	3.17470	1.60380	HepG2	TRA2A
FAM107B	ENSG00000065809.9	1181.79850	807.73890	0.54890	3.43060	1.80250	HepG2	TRA2A
MTHFD2	ENSG00000065911.7	3981.37410	1563.64620	1.34830	19.69540	16.40770	HepG2	TRA2A
PKM	ENSG00000067225.13	17188.72780	23988.73320	-0.48090	3.35890	1.74940	HepG2	TRA2A
IARS2	ENSG00000067704.8	2782.09880	3967.54000	-0.51210	3.50710	1.86700	HepG2	TRA2A
CBFB	ENSG00000067955.9	719.98900	1036.62600	-0.52580	2.97110	1.44990	HepG2	TRA2A
PDK3	ENSG00000067992.8	110.22120	194.37870	-0.81850	2.86720	1.37250	HepG2	TRA2A
ACSL4	ENSG00000068366.15	5887.27700	15162.49000	-1.36480	7.53410	5.20470	HepG2	TRA2A
TGFBR3	ENSG00000069702.6	11349.52840	8414.54270	0.43160	2.78170	1.30860	HepG2	TRA2A
HES2	ENSG00000069812.7	0.49560	13.20560	-4.73590	2.85490	1.36310	HepG2	TRA2A
JMJD6	ENSG00000070495.10	442.79920	685.84850	-0.63120	3.62530	1.95180	HepG2	TRA2A
ASNS	ENSG00000070669.12	1390.59270	297.72600	2.22350	38.90460	35.01480	HepG2	TRA2A
RPL31	ENSG00000071082.6	7708.36600	10633.87200	-0.46420	3.13980	1.57780	HepG2	TRA2A
TRIB2	ENSG00000071575.7	174.45500	81.02110	1.10640	4.23560	2.44390	HepG2	TRA2A
ALDH3A2	ENSG00000072210.14	2507.73140	3478.29060	-0.47200	3.07530	1.52860	HepG2	TRA2A
RHOBTB1	ENSG00000072422.12	1815.43920	1253.45470	0.53430	3.47940	1.84500	HepG2	TRA2A
P4HA2	ENSG00000072682.14	1529.50180	2337.77470	-0.61210	4.46770	2.63360	HepG2	TRA2A
SCARB1	ENSG00000073060.11	4243.83120	6348.40900	-0.58100	4.55460	2.69970	HepG2	TRA2A
NTN4	ENSG00000074527.7	490.91150	215.60610	1.18700	9.21260	6.73780	HepG2	TRA2A
ENO1	ENSG00000074800.9	34740.76850	55730.52030	-0.68180	6.25710	4.10780	HepG2	TRA2A
TUBE1	ENSG00000074935.9	316.54610	199.76880	0.66400	2.84940	1.36000	HepG2	TRA2A
GPR137B	ENSG00000077585.9	103.14090	47.25430	1.12600	3.20430	1.62640	HepG2	TRA2A
NAALAD2	ENSG00000077616.6	796.20070	382.39660	1.05800	5.64900	3.58970	HepG2	TRA2A
PIAS2	ENSG00000078043.11	453.93350	747.37730	-0.71940	4.65110	2.77840	HepG2	TRA2A
PIK3C3	ENSG00000078142.7	925.20670	1320.37780	-0.51310	3.04930	1.50590	HepG2	TRA2A
EDN1	ENSG00000078401.6	340.82850	147.91720	1.20420	7.86620	5.50370	HepG2	TRA2A
TP53INP2	ENSG00000078804.8	1542.76740	2636.92410	-0.77330	6.94450	4.69160	HepG2	TRA2A
TNS1	ENSG00000079308.12	1410.55410	3506.47780	-1.31380	18.88630	15.63340	HepG2	TRA2A
CEACAM1	ENSG00000079385.17	3748.35020	5554.83610	-0.56750	3.75640	2.05580	HepG2	TRA2A
FDFT1	ENSG00000079459.8	4409.47090	6845.23860	-0.63450	5.27130	3.28660	HepG2	TRA2A
SCGN	ENSG00000079689.9	344.03880	200.25550	0.78060	3.97460	2.22780	HepG2	TRA2A
LRRC16A	ENSG00000079691.15	272.28220	166.74350	0.70740	2.97740	1.45130	HepG2	TRA2A
PGM1	ENSG00000079739.11	1303.01960	2257.50070	-0.79290	7.12960	4.84550	HepG2	TRA2A
PTPRH	ENSG00000080031.5	787.59870	1239.89890	-0.65470	4.62180	2.75460	HepG2	TRA2A
KIAA0020	ENSG00000080608.9	836.83310	575.75890	0.53940	2.97430	1.44990	HepG2	TRA2A
AFP	ENSG00000081051.3	89124.15290	141334.91780	-0.66520	5.73680	3.66440	HepG2	TRA2A
STRADB	ENSG00000082146.8	638.73880	1174.29960	-0.87850	7.58830	5.25090	HepG2	TRA2A
NFE2L1	ENSG00000082641.11	5420.20850	8171.83290	-0.59230	4.73300	2.83740	HepG2	TRA2A
SMAP2	ENSG00000084070.7	752.57650	1141.98870	-0.60160	3.92540	2.18590	HepG2	TRA2A
HAL	ENSG00000084110.6	180.80270	892.58740	-2.30360	34.14300	30.47510	HepG2	TRA2A
COL16A1	ENSG00000084636.13	598.01190	307.84710	0.95790	4.83450	2.91790	HepG2	TRA2A
PREP	ENSG00000085377.9	599.70410	857.98350	-0.51670	2.78040	1.30780	HepG2	TRA2A
HSD17B2	ENSG00000086696.6	290.58140	669.65540	-1.20450	10.74940	8.10680	HepG2	TRA2A
FTL	ENSG00000087086.9	30468.10220	47165.15550	-0.63040	4.48460	2.64790	HepG2	TRA2A
MMP2	ENSG00000087245.8	410.05430	188.35370	1.12230	4.17660	2.39640	HepG2	TRA2A
LPCAT2	ENSG00000087253.7	978.95410	568.42880	0.78420	5.93750	3.83310	HepG2	TRA2A
DNMT3B	ENSG00000088305.14	405.87930	263.78120	0.62160	2.97860	1.45190	HepG2	TRA2A
ATRN	ENSG00000088812.13	4140.28270	5749.16350	-0.47360	3.23040	1.64460	HepG2	TRA2A
PLK1S1	ENSG00000088970.11	2772.36320	1812.68330	0.61290	4.61920	2.75340	HepG2	TRA2A
RPL6	ENSG00000089009.11	9511.51470	13118.24660	-0.46380	3.08650	1.53460	HepG2	TRA2A
OAS1	ENSG00000089127.8	76.84970	193.81790	-1.33460	6.54100	4.34740	HepG2	TRA2A
CHGB	ENSG00000089199.5	138.52110	56.50020	1.29370	4.31030	2.50100	HepG2	TRA2A
PEBP1	ENSG00000089220.4	5677.35510	8725.85340	-0.62010	5.22310	3.24720	HepG2	TRA2A
LYZ	ENSG00000090382.2	30336.34770	47028.79550	-0.63250	5.43010	3.41370	HepG2	TRA2A
ZNF268	ENSG00000090612.16	734.02870	459.25590	0.67640	4.19280	2.40770	HepG2	TRA2A
GOLGA3	ENSG00000090615.8	835.14090	1307.38420	-0.64660	4.52240	2.67400	HepG2	TRA2A
AARS	ENSG00000090861.11	3505.17030	2402.50720	0.54480	3.88350	2.15310	HepG2	TRA2A
NRCAM	ENSG00000091129.15	70.43900	15.52990	2.18120	6.22350	4.07670	HepG2	TRA2A
LAMB1	ENSG00000091136.9	11096.36280	8126.34250	0.44930	3.01700	1.48060	HepG2	TRA2A
FH	ENSG00000091483.6	698.37490	1052.89600	-0.59230	3.73310	2.03560	HepG2	TRA2A
SEL1L3	ENSG00000091490.6	17.04950	53.41010	-1.64740	3.30180	1.70660	HepG2	TRA2A
TF	ENSG00000091513.10	109124.97680	186616.62450	-0.77410	7.95000	5.58310	HepG2	TRA2A
APOH	ENSG00000091583.6	29524.06300	42770.89860	-0.53470	4.14250	2.36910	HepG2	TRA2A
PHGDH	ENSG00000092621.7	1827.23810	1198.91280	0.60780	4.41000	2.58220	HepG2	TRA2A
XYLB	ENSG00000093217.5	457.01290	796.36940	-0.80120	5.76820	3.68690	HepG2	TRA2A
NANS	ENSG00000095380.10	615.85200	960.97490	-0.64190	4.08270	2.31790	HepG2	TRA2A
FKBP5	ENSG00000096060.10	1340.63910	959.87470	0.48190	2.81180	1.33090	HepG2	TRA2A
DSP	ENSG00000096696.9	19662.25560	26468.74740	-0.42890	2.82280	1.33840	HepG2	TRA2A
PCSK5	ENSG00000099139.9	107.85950	37.21560	1.53510	5.37950	3.37620	HepG2	TRA2A
SCD	ENSG00000099194.5	37764.78840	77944.06600	-1.04540	7.60430	5.26280	HepG2	TRA2A
RAB18	ENSG00000099246.12	795.83260	1146.68430	-0.52690	3.13710	1.57650	HepG2	TRA2A
NRP1	ENSG00000099250.13	1796.65940	872.71920	1.04160	11.20080	8.52410	HepG2	TRA2A
HSD17B7P2	ENSG00000099251.10	140.98900	249.39860	-0.82290	3.65480	1.97370	HepG2	TRA2A
SNAP29	ENSG00000099940.7	333.71160	520.84150	-0.64220	3.43170	1.80290	HepG2	TRA2A
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

101 RBPs can affect the gene expression of TRA2A :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TRA2A	ENSG00000164548.6	1045.60700	1241.10110	-0.24730	2.57830	1.98810	HepG2	ACO1
TRA2A	ENSG00000164548.6	1326.64220	1008.41160	0.39560	2.40080	1.90180	HepG2	AKAP1
TRA2A	ENSG00000164548.6	1308.84970	1645.06460	-0.32980	4.43030	3.59740	HepG2	AUH
TRA2A	ENSG00000164548.6	1112.68760	792.70670	0.48910	3.96520	3.04950	HepG2	CIRBP
TRA2A	ENSG00000164548.6	1140.86690	1841.81420	-0.69100	5.13370	4.22260	HepG2	CPSF6
TRA2A	ENSG00000164548.6	923.21460	1237.21000	-0.42240	3.54110	2.29330	HepG2	CPSF7
TRA2A	ENSG00000164548.6	813.28490	1004.56310	-0.30470	2.56410	1.58820	HepG2	YBX3
TRA2A	ENSG00000164548.6	1481.97310	1910.02890	-0.36610	5.11020	4.28420	HepG2	CELF1
TRA2A	ENSG00000164548.6	1550.36180	2053.81350	-0.40570	8.46650	7.27860	HepG2	DAZAP1
TRA2A	ENSG00000164548.6	973.88290	1147.86000	-0.23710	2.47270	1.68020	HepG2	DDX19B
TRA2A	ENSG00000164548.6	1290.97510	1061.77660	0.28190	1.88520	1.31310	HepG2	DDX21
TRA2A	ENSG00000164548.6	1249.93900	965.95530	0.37170	2.41190	1.82360	HepG2	DDX3X
TRA2A	ENSG00000164548.6	606.48630	829.83850	-0.45240	2.75040	2.13410	HepG2	DDX6
TRA2A	ENSG00000164548.6	710.18980	986.44930	-0.47400	5.65390	4.67920	HepG2	DNAJC21
TRA2A	ENSG00000164548.6	821.07380	977.67530	-0.25180	2.49250	1.86740	HepG2	DNAJC2
TRA2A	ENSG00000164548.6	1238.70850	1002.35970	0.30530	2.38030	1.37790	HepG2	EIF3G
TRA2A	ENSG00000164548.6	1191.52770	881.50150	0.43470	2.92860	2.27080	HepG2	EIF4A3
TRA2A	ENSG00000164548.6	1392.55600	858.32310	0.69800	5.36230	4.42640	HepG2	EIF4B
TRA2A	ENSG00000164548.6	1220.03470	1940.93980	-0.66980	8.88500	7.46000	HepG2	EIF4G2
TRA2A	ENSG00000164548.6	2357.86000	1888.87950	0.31980	4.10630	3.39910	HepG2	ETF1
TRA2A	ENSG00000164548.6	792.41580	1212.81480	-0.61400	7.74670	6.35590	HepG2	EWSR1
TRA2A	ENSG00000164548.6	548.81920	741.84400	-0.43480	3.74740	2.36820	HepG2	FAM120A
TRA2A	ENSG00000164548.6	853.22040	560.85950	0.60520	6.05550	4.91260	HepG2	FUBP3
TRA2A	ENSG00000164548.6	1218.15060	889.48950	0.45350	3.45330	2.68550	HepG2	FXR1
TRA2A	ENSG00000164548.6	1199.01020	825.08390	0.53910	4.37590	3.54710	HepG2	G3BP1
TRA2A	ENSG00000164548.6	1233.49960	2088.01290	-0.75940	5.64590	4.75320	HepG2	GPKOW
TRA2A	ENSG00000164548.6	884.79580	1184.92170	-0.42140	4.97440	3.70370	HepG2	HDGF
TRA2A	ENSG00000164548.6	1219.21070	995.89900	0.29180	1.93560	1.38470	HepG2	HNRNPA1
TRA2A	ENSG00000164548.6	1085.52360	1520.47650	-0.48610	7.86760	6.73690	HepG2	HNRNPF
TRA2A	ENSG00000164548.6	1236.19840	1870.88610	-0.59780	16.01470	14.51090	HepG2	HNRNPL
TRA2A	ENSG00000164548.6	1353.78100	1992.61350	-0.55770	3.62360	2.91310	HepG2	HNRNPLL
TRA2A	ENSG00000164548.6	836.98450	1100.41040	-0.39480	5.16840	4.35990	HepG2	HNRNPU
TRA2A	ENSG00000164548.6	1084.81380	1497.24050	-0.46490	5.54120	4.55430	HepG2	IGF2BP1
TRA2A	ENSG00000164548.6	1078.88290	838.66260	0.36330	2.39990	1.76610	HepG2	IGF2BP2
TRA2A	ENSG00000164548.6	874.74750	1134.54810	-0.37520	5.27620	3.87770	HepG2	KIF1C
TRA2A	ENSG00000164548.6	1350.01450	894.76570	0.59330	4.97830	4.15310	HepG2	MATR3
TRA2A	ENSG00000164548.6	1324.94380	915.83030	0.53270	4.39370	3.60350	HepG2	NCBP2
TRA2A	ENSG00000164548.6	1446.01740	2036.55380	-0.49400	7.66760	6.41470	HepG2	NOL12
TRA2A	ENSG00000164548.6	900.97410	740.48990	0.28290	2.58660	1.99430	HepG2	PCBP1
TRA2A	ENSG00000164548.6	804.53190	981.48180	-0.28680	2.43890	1.74240	HepG2	PPIL4
TRA2A	ENSG00000164548.6	741.03690	1029.88420	-0.47490	2.66780	1.87470	HepG2	PRPF8
TRA2A	ENSG00000164548.6	1150.37450	753.51510	0.61030	10.54670	9.61250	HepG2	PTBP1
TRA2A	ENSG00000164548.6	667.52640	1944.05120	-1.54220	45.18020	43.15760	HepG2	PUF60
TRA2A	ENSG00000164548.6	1481.38890	2063.67540	-0.47830	11.97670	10.92560	HepG2	PUM1
TRA2A	ENSG00000164548.6	1517.58970	2062.18090	-0.44240	5.96150	4.99080	HepG2	PUM2
TRA2A	ENSG00000164548.6	1115.35400	815.99250	0.45080	5.01440	4.21100	HepG2	QKI
TRA2A	ENSG00000164548.6	1411.53960	1691.02880	-0.26060	2.41610	1.60850	HepG2	RBM15
TRA2A	ENSG00000164548.6	1034.46370	740.59700	0.48200	2.38110	1.75040	HepG2	RBM25
TRA2A	ENSG00000164548.6	1386.81880	838.55760	0.72570	14.77250	13.70850	HepG2	NELFE
TRA2A	ENSG00000164548.6	1244.02900	781.06120	0.67140	10.16490	9.09820	HepG2	RECQL
TRA2A	ENSG00000164548.6	1164.35640	1637.84800	-0.49230	5.20760	4.30910	HepG2	RPLP0
TRA2A	ENSG00000164548.6	726.91770	1018.80920	-0.48700	2.80580	2.01460	HepG2	RRP9
TRA2A	ENSG00000164548.6	676.39400	979.97650	-0.53490	8.20130	7.18010	HepG2	SAFB2
TRA2A	ENSG00000164548.6	1172.57970	784.43670	0.57990	9.41230	8.42170	HepG2	SF3B4
TRA2A	ENSG00000164548.6	1084.94020	1863.99940	-0.78080	24.78150	23.09080	HepG2	SLBP
TRA2A	ENSG00000164548.6	875.59050	1215.14050	-0.47280	2.20550	1.36040	HepG2	SMNDC1
TRA2A	ENSG00000164548.6	1211.63000	818.81060	0.56520	5.12430	4.53190	HepG2	SRSF1
TRA2A	ENSG00000164548.6	1478.06640	1919.44250	-0.37700	5.92890	5.06300	HepG2	SRSF5
TRA2A	ENSG00000164548.6	812.23880	1493.80000	-0.87900	22.43880	20.81420	HepG2	SRSF7
TRA2A	ENSG00000164548.6	1985.91350	1548.04520	0.35930	3.13020	2.59250	HepG2	SSB
TRA2A	ENSG00000164548.6	1564.04490	2182.95620	-0.48100	11.16030	10.05450	HepG2	SUCLG1
TRA2A	ENSG00000164548.6	703.03270	1024.39010	-0.54310	4.97260	3.73170	HepG2	SUPT6H
TRA2A	ENSG00000164548.6	973.69300	1328.60990	-0.44840	2.37740	1.74410	HepG2	SUPV3L1
TRA2A	ENSG00000164548.6	1025.96610	736.05800	0.47900	5.71900	4.96320	HepG2	TAF15
TRA2A	ENSG00000164548.6	1279.78510	1941.72260	-0.60140	4.03280	3.17720	HepG2	TARDBP
TRA2A	ENSG00000164548.6	664.33860	890.59360	-0.42280	2.35860	1.43250	HepG2	TFIP11
TRA2A	ENSG00000164548.6	860.37540	1078.80760	-0.32640	3.55780	2.93590	HepG2	TRIM56
TRA2A	ENSG00000164548.6	1374.62900	1899.22180	-0.46640	5.73820	4.42220	HepG2	TUFM
TRA2A	ENSG00000164548.6	1261.30360	2010.27410	-0.67250	7.04320	5.68010	HepG2	UBE2L3
TRA2A	ENSG00000164548.6	1349.46730	1075.77160	0.32690	4.35740	3.54480	HepG2	ZC3H8
TRA2A	ENSG00000164548.6	1356.87750	1604.11160	-0.24150	3.16150	2.58930	HepG2	ZNF622
TRA2A	ENSG00000164548.6	3972.80820	2254.18960	0.81750	32.40560	30.55170	K562	AGGF1
TRA2A	ENSG00000164548.6	3300.99640	2477.03600	0.41420	2.68120	1.71840	K562	AKAP8
TRA2A	ENSG00000164548.6	3845.00020	2345.59200	0.71290	12.80430	11.25330	K562	AKAP8L
TRA2A	ENSG00000164548.6	4386.74530	3034.53960	0.53160	7.43920	6.55260	K562	AQR
TRA2A	ENSG00000164548.6	3176.41520	2461.10100	0.36800	5.64190	4.28370	K562	ATP5C1
TRA2A	ENSG00000164548.6	1290.49950	1566.74210	-0.27980	3.08260	2.07320	K562	BCLAF1
TRA2A	ENSG00000164548.6	2338.46270	2764.02540	-0.24120	2.65300	1.57060	K562	CPEB4
TRA2A	ENSG00000164548.6	1606.81960	2285.96470	-0.50860	7.11280	5.84720	K562	CPSF6
TRA2A	ENSG00000164548.6	4243.46510	3670.81200	0.20900	2.23820	1.36120	K562	CELF1
TRA2A	ENSG00000164548.6	3379.15960	2523.99040	0.42090	7.76700	6.16570	K562	DKC1
TRA2A	ENSG00000164548.6	1135.74650	883.75310	0.36180	2.66080	1.34470	K562	DNAJC21
TRA2A	ENSG00000164548.6	1008.73540	1350.80370	-0.42130	2.81170	1.89070	K562	EFTUD2
TRA2A	ENSG00000164548.6	1149.03200	835.95080	0.45880	2.24290	1.34910	K562	EIF3A
TRA2A	ENSG00000164548.6	3435.43890	2985.66980	0.20230	2.51790	1.61820	K562	EIF4G2
TRA2A	ENSG00000164548.6	1457.50620	1853.95960	-0.34710	4.37270	3.63610	K562	FXR1
TRA2A	ENSG00000164548.6	2623.27900	1885.88880	0.47600	6.14540	3.90650	K562	G3BP1
TRA2A	ENSG00000164548.6	946.59510	1354.24830	-0.51670	4.29790	2.49300	K562	GEMIN5
TRA2A	ENSG00000164548.6	1607.33450	2182.55400	-0.44130	4.91880	3.86310	K562	GPKOW
TRA2A	ENSG00000164548.6	1137.85410	1482.48140	-0.38170	3.53650	2.87210	K562	HNRNPC
TRA2A	ENSG00000164548.6	1255.01880	858.62090	0.54750	4.93590	2.95870	K562	ILF3
TRA2A	ENSG00000164548.6	4564.98170	2489.24000	0.87480	10.49670	8.59560	K562	KIF1C
TRA2A	ENSG00000164548.6	1598.20440	2073.09180	-0.37530	3.85620	2.85580	K562	MAGOH
TRA2A	ENSG00000164548.6	3937.44480	2788.58030	0.49760	7.31920	5.70330	K562	MBNL1
TRA2A	ENSG00000164548.6	4113.36940	1954.59450	1.07340	7.15180	5.48330	K562	NAA15
TRA2A	ENSG00000164548.6	2358.08620	1791.54930	0.39630	3.13290	2.24720	K562	PCBP3
TRA2A	ENSG00000164548.6	1880.90720	1447.30170	0.37800	3.84710	2.11780	K562	PHF6
TRA2A	ENSG00000164548.6	1786.10920	1374.19990	0.37810	4.25110	3.25490	K562	POLR2G
TRA2A	ENSG00000164548.6	2096.22890	2561.45790	-0.28920	2.28980	1.54380	K562	PPIG
TRA2A	ENSG00000164548.6	1687.01190	1329.17800	0.34380	2.85790	1.93640	K562	PSIP1
TRA2A	ENSG00000164548.6	1630.54340	2014.13270	-0.30480	2.89730	2.22050	K562	PTBP1
TRA2A	ENSG00000164548.6	2062.64310	3257.62940	-0.65930	10.09370	8.51340	K562	PUF60
TRA2A	ENSG00000164548.6	4109.56610	3464.72860	0.24610	2.77960	1.70910	K562	PUM1
TRA2A	ENSG00000164548.6	5299.35550	2326.14440	1.18780	29.84170	28.03350	K562	PUS1
TRA2A	ENSG00000164548.6	4376.79650	2266.50980	0.94930	32.80950	30.67570	K562	RBM15
TRA2A	ENSG00000164548.6	1585.38090	1931.35510	-0.28480	2.16810	1.42860	K562	RBM22
TRA2A	ENSG00000164548.6	1642.80610	2032.43240	-0.30700	2.27350	1.30680	K562	NELFE
TRA2A	ENSG00000164548.6	1469.49030	2465.92920	-0.74680	5.27290	3.82900	K562	RPS3
TRA2A	ENSG00000164548.6	1651.91150	1124.96290	0.55420	3.55990	1.76720	K562	SERBP1
TRA2A	ENSG00000164548.6	1090.96250	1974.51280	-0.85590	17.27880	15.52770	K562	SRSF1
TRA2A	ENSG00000164548.6	1454.12980	2381.03490	-0.71140	4.69230	3.25850	K562	SRSF4
TRA2A	ENSG00000164548.6	1877.66220	1378.33000	0.44590	5.69990	4.51270	K562	SYNCRIP
TRA2A	ENSG00000164548.6	1331.64660	1998.35460	-0.58560	6.85880	5.69840	K562	TARDBP
TRA2A	ENSG00000164548.6	1336.57750	1891.53750	-0.50100	5.82550	4.10070	K562	TRA2A
TRA2A	ENSG00000164548.6	1574.49490	2134.79630	-0.43920	5.85270	4.68500	K562	U2AF2
TRA2A	ENSG00000164548.6	1804.43520	2217.24640	-0.29720	4.52720	3.63190	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

251 alternative splicing events after Knockdown/Knockout TRA2A protein :

Only display 100 entries as example. Please click "View All" button to see all 251 entries.     

View All

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	APOC1	ENSG00000130208.5	chr19	+	45417928	45417990			45417503	45417746	45418128	45418206	0.10300	0.00000	0.00149	included	HepG2	TRA2A
SE	A1CF	ENSG00000148584.10	chr10	-	52623792	52623840			52619601	52619745	52645340	52645435	0.08100	0.00002	0.02630	included	HepG2	TRA2A
SE	EHBP1	ENSG00000115504.10	chr2	+	63215065	63215173			63206322	63206470	63217850	63217975	0.16100	0.00003	0.03089	included	HepG2	TRA2A
SE	VPS29	ENSG00000111237.14	chr12	-	110937261	110937351			110933816	110934008	110939853	110939916	0.21000	0.00004	0.04271	included	HepG2	TRA2A
SE	SCFD1	ENSG00000092108.16	chr14	+	31097414	31097485			31091524	31091605	31099682	31099771	0.11600	0.00007	0.05685	included	HepG2	TRA2A
SE	ESYT2	ENSG00000117868.11	chr7	-	158545471	158545534			158542339	158542414	158552176	158552272	0.21500	0.00004	0.04011	included	HepG2	TRA2A
SE	FAM208B	ENSG00000108021.15	chr10	+	5762222	5762360			5759621	5759713	5762506	5762631	0.32200	0.00009	0.07064	included	HepG2	TRA2A
SE	LAMTOR4	ENSG00000188186.6	chr7	+	99750338	99750380			99746979	99747202	99751022	99751140	0.07600	0.00011	0.08718	included	HepG2	TRA2A
SE	FDPS	ENSG00000160752.10	chr1	+	155279579	155279756			155278642	155278756	155279833	155279996	0.11000	0.00000	0.00018	included	HepG2	TRA2A
SE	ACADM	ENSG00000117054.9	chr1	+	76252384	76252550			76251717	76251959	76253181	76253260	0.09000	0.00012	0.08942	included	HepG2	TRA2A
SE	CD46	ENSG00000117335.14	chr1	+	207941123	207941168			207940357	207940540	207943665	207943707	0.07100	0.00000	0.00686	included	HepG2	TRA2A
SE	GPR126	ENSG00000112414.10	chr6	+	142704896	142704980			142703087	142703156	142711394	142711480	0.48400	0.00000	0.00000	included	HepG2	TRA2A
SE	GPR126	ENSG00000112414.10	chr6	+	142762044	142762090			142759348	142759501	142764473	142767403	0.12500	0.00005	0.04586	included	HepG2	TRA2A
SE	RPS6KA3	ENSG00000177189.8	chrX	-	20258686	20258723			20252875	20252932	20284681	20284760	0.07200	0.00000	0.00898	included	HepG2	TRA2A
SE	FN1	ENSG00000115414.14	chr2	-	216245533	216245803			216243852	216244040	216246934	216247048	0.07200	0.00005	0.04390	included	HepG2	TRA2A
SE	FN1	ENSG00000115414.14	chr2	-	216257653	216257926			216256354	216256537	216259250	216259442	0.10800	0.00000	0.00000	included	HepG2	TRA2A
SE	FZD6	ENSG00000164930.7	chr8	+	104340495	104340644			104336708	104337726	104341882	104342293	0.25600	0.00009	0.07447	included	HepG2	TRA2A
SE	ADD3	ENSG00000148700.9	chr10	+	111892062	111892158			111890120	111890244	111893083	111893969	0.36700	0.00000	0.00009	included	HepG2	TRA2A
SE	FUBP1	ENSG00000162613.12	chr1	-	78434705	78434768			78433848	78433887	78435608	78435699	0.05900	0.00007	0.06330	included	HepG2	TRA2A
SE	EP400	ENSG00000183495.9	chr12	+	132448076	132448187			132445129	132446499	132464241	132464329	0.77900	0.00000	0.00155	included	HepG2	TRA2A
SE	SPATS2L	ENSG00000196141.8	chr2	+	201303844	201304051			201283972	201284219	201305371	201305507	0.18200	0.00001	0.01218	included	HepG2	TRA2A
SE	DCTD	ENSG00000129187.10	chr4	-	183837571	183837692			183836613	183836728	183838440	183838630	0.25700	0.00001	0.01048	included	HepG2	TRA2A
SE	DST	ENSG00000151914.13	chr6	-	56333779	56333797			56330875	56330993	56334680	56334755	-0.18400	0.00001	0.01521	excluded	HepG2	TRA2A
SE	ALB	ENSG00000163631.12	chr4	+	74272345	74272478			74270017	74270123	74275071	74275204	-0.17200	0.00000	0.00493	excluded	HepG2	TRA2A
SE	CHDH	ENSG00000016391.6	chr3	-	53853215	53853358			53852964	53853067	53853558	53853701	-0.12000	0.00004	0.04011	excluded	HepG2	TRA2A
SE	CDCA7	ENSG00000144354.9	chr2	+	174228727	174228889			174228545	174228623	174229522	174229601	-0.21700	0.00003	0.03573	excluded	HepG2	TRA2A
SE	NASP	ENSG00000132780.12	chr1	+	46072992	46074009			46072153	46072263	46078840	46078920	-0.11300	0.00009	0.07131	excluded	HepG2	TRA2A
SE	FLNB	ENSG00000136068.10	chr3	+	58127584	58127656			58124008	58124256	58128376	58128479	-0.19800	0.00000	0.00648	excluded	HepG2	TRA2A
SE	TFPI	ENSG00000003436.10	chr2	-	188378342	188378373			188368374	188368497	188418926	188419219	-0.16600	0.00000	0.00003	excluded	HepG2	TRA2A
SE	UTRN	ENSG00000152818.14	chr6	+	145148483	145148522			145142017	145142154	145148746	145148812	-0.10800	0.00001	0.01208	excluded	HepG2	TRA2A
SE	HOXD1	ENSG00000128645.11	chr2	+	177054276	177054409			177053306	177054181	177054535	177055688	-0.32000	0.00002	0.02369	excluded	HepG2	TRA2A
SE	RBCK1	ENSG00000125826.15	chr20	+	391055	391281			390524	390669	398169	398263	-0.33500	0.00000	0.00000	excluded	HepG2	TRA2A
SE	PRPF40A	ENSG00000196504.11	chr2	-	153535569	153535623			153533964	153533989	153535865	153535986	-0.08900	0.00002	0.02369	excluded	HepG2	TRA2A
SE	PRMT2	ENSG00000160310.12	chr21	+	48056350	48056459			48055078	48055675	48056807	48056902	-0.14700	0.00005	0.04733	excluded	HepG2	TRA2A
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187936			124186457	124186547	124189139	124189638	-0.31300	0.00000	0.00232	excluded	HepG2	TRA2A
SE	EML4	ENSG00000143924.14	chr2	+	42488260	42488434			42483640	42483770	42490317	42490446	-0.09300	0.00000	0.00000	excluded	HepG2	TRA2A
SE	SRSF1	ENSG00000136450.8	chr17	-	56082774	56082961			56081948	56082402	56083161	56083334	-0.12400	0.00001	0.01218	excluded	HepG2	TRA2A
SE	PKP4	ENSG00000144283.17	chr2	+	159533250	159533379			159530394	159530512	159536940	159537941	0.24100	0.00001	0.02534	included	K562	TRA2A
SE	TRIM37	ENSG00000108395.9	chr17	-	57078958	57079075			57076741	57076820	57089688	57089807	0.20600	0.00003	0.04094	included	K562	TRA2A
SE	RAN	ENSG00000132341.7	chr12	+	131357128	131357162			131356620	131356671	131357380	131357465	0.19200	0.00004	0.05287	included	K562	TRA2A
SE	ALDOA	ENSG00000149925.12	chr16	+	30077196	30077248			30075744	30075826	30078554	30078687	0.16100	0.00000	0.00000	included	K562	TRA2A
SE	SREK1	ENSG00000153914.11	chr5	+	65451892	65454760			65449290	65449424	65455046	65455162	0.23600	0.00003	0.04094	included	K562	TRA2A
SE	ZNF397	ENSG00000186812.8	chr18	+	32821565	32821654			32821018	32821073	32822354	32822848	0.30600	0.00007	0.06162	included	K562	TRA2A
SE	MORF4L2	ENSG00000123562.12	chrX	-	102939608	102939657			102933426	102933579	102940098	102940188	0.13000	0.00001	0.01595	included	K562	TRA2A
SE	BCOR	ENSG00000183337.12	chrX	-	39930889	39930943			39930225	39930412	39931601	39934433	0.26700	0.00000	0.00016	included	K562	TRA2A
SE	SLC25A1	ENSG00000100075.5	chr22	-	19165454	19165554			19164632	19164717	19165645	19165753	0.38500	0.00001	0.01500	included	K562	TRA2A
SE	MAZ	ENSG00000103495.9	chr16	+	29820860	29821085			29819890	29820062	29821397	29822485	0.20100	0.00011	0.08271	included	K562	TRA2A
SE	UQCRH	ENSG00000173660.7	chr1	+	46775568	46775716			46774772	46774799	46775826	46775988	0.05700	0.00002	0.03242	included	K562	TRA2A
SE	DCAF8	ENSG00000132716.14	chr1	-	160253319	160253429			160252733	160252899	160254844	160254920	0.09600	0.00004	0.05397	included	K562	TRA2A
SE	PPP2R5C	ENSG00000078304.15	chr14	+	102276249	102276373			102252354	102252520	102323022	102323222	0.07400	0.00002	0.03016	included	K562	TRA2A
SE	SLC7A11	ENSG00000151012.9	chr4	-	139103450	139103547			139101794	139101944	139104355	139104459	0.23600	0.00000	0.00161	included	K562	TRA2A
SE	FLVCR1	ENSG00000162769.8	chr1	+	213043395	213043510			213036972	213037211	213046019	213046160	0.43600	0.00005	0.05407	included	K562	TRA2A
SE	CENPK	ENSG00000123219.8	chr5	-	64846932	64847069			64838628	64838675	64847390	64847463	0.15700	0.00012	0.08415	included	K562	TRA2A
SE	SLC12A4	ENSG00000124067.12	chr16	-	67988006	67988122			67986144	67986328	67988545	67988676	0.08700	0.00011	0.08271	included	K562	TRA2A
SE	SRSF11	ENSG00000116754.9	chr1	+	70697541	70697658			70694104	70694238	70697950	70698058	0.11000	0.00005	0.05407	included	K562	TRA2A
SE	SETD5	ENSG00000168137.11	chr3	+	9510202	9510259			9506108	9506356	9512142	9512613	0.06000	0.00006	0.05407	included	K562	TRA2A
SE	ZNF655	ENSG00000197343.6	chr7	+	99159510	99159596			99158155	99158318	99169310	99169415	0.34000	0.00010	0.07725	included	K562	TRA2A
SE	ARID4B	ENSG00000054267.16	chr1	-	235344385	235344499			235341170	235341228	235344899	235345180	0.22300	0.00005	0.05407	included	K562	TRA2A
SE	PFDN1	ENSG00000113068.5	chr5	-	139680000	139680167			139661033	139661118	139682625	139682706	-0.05200	0.00012	0.08658	excluded	K562	TRA2A
SE	MPP1	ENSG00000130830.10	chrX	-	154018228	154018297			154014478	154014675	154033546	154033760	-0.07000	0.00001	0.01665	excluded	K562	TRA2A
SE	CHD6	ENSG00000124177.10	chr20	-	40179943	40179999			40161688	40162209	40246978	40247133	-0.35200	0.00000	0.00389	excluded	K562	TRA2A
SE	ANGPT1	ENSG00000154188.5	chr8	-	108296909	108297076			108276448	108276579	108306163	108306265	-0.16500	0.00002	0.03477	excluded	K562	TRA2A
SE	MLX	ENSG00000108788.7	chr17	+	40720487	40720577			40719636	40719673	40720854	40720961	-0.18700	0.00000	0.01086	excluded	K562	TRA2A
SE	PDZD11	ENSG00000120509.6	chrX	-	69509371	69509443			69509037	69509204	69509709	69509795	-0.16500	0.00006	0.05407	excluded	K562	TRA2A
SE	CDCA7	ENSG00000144354.9	chr2	+	174223982	174224219			174223439	174223565	174227953	174228190	-0.10000	0.00002	0.03016	excluded	K562	TRA2A
SE	TCF25	ENSG00000141002.14	chr16	+	89944868	89945035			89940051	89940267	89949758	89949920	-0.26000	0.00000	0.00389	excluded	K562	TRA2A
SE	RP11-155D18.12	ENSG00000254782.1	chr3	-	52005827	52005908			52005475	52005714	52007980	52008047	-0.41900	0.00000	0.00396	excluded	K562	TRA2A
SE	RNPS1	ENSG00000205937.7	chr16	-	2314573	2314761			2314176	2314332	2318055	2318413	-0.19100	0.00000	0.00006	excluded	K562	TRA2A
SE	RWDD3	ENSG00000122481.12	chr1	+	95705332	95705465			95699776	95699871	95709766	95710254	-0.47600	0.00005	0.05407	excluded	K562	TRA2A
SE	SLC25A10	ENSG00000183048.7	chr17	+	79680291	79680536			79679293	79679549	79681982	79682102	-0.63400	0.00002	0.03477	excluded	K562	TRA2A
SE	MSMO1	ENSG00000052802.8	chr4	+	166254491	166254777			166248774	166248916	166258940	166259089	-0.07900	0.00011	0.08271	excluded	K562	TRA2A
SE	MCM3AP-AS1	ENSG00000215424.5	chr21	+	47650240	47650441			47649144	47649180	47660747	47660933	-0.63100	0.00006	0.05407	excluded	K562	TRA2A
SE	GRAMD1A	ENSG00000089351.10	chr19	+	35514600	35514718			35514330	35514451	35516952	35517373	-0.09100	0.00011	0.08271	excluded	K562	TRA2A
SE	CAPN7	ENSG00000131375.5	chr3	+	15287032	15287178			15283684	15283760	15288238	15288301	-0.22400	0.00003	0.04094	excluded	K562	TRA2A
SE	HIATL1	ENSG00000148110.11	chr9	+	97203266	97203381			97200682	97200810	97207245	97207464	-0.25000	0.00001	0.01665	excluded	K562	TRA2A
SE	LY6E	ENSG00000160932.6	chr8	+	144101678	144101794			144099933	144100003	144102299	144102408	-0.11200	0.00002	0.03831	excluded	K562	TRA2A
SE	PREPL	ENSG00000138078.11	chr2	-	44586635	44587177			44573406	44573529	44588518	44588633	-0.19600	0.00006	0.05407	excluded	K562	TRA2A
SE	GANAB	ENSG00000089597.12	chr11	-	62401781	62401847			62400916	62400986	62402292	62402472	-0.08800	0.00005	0.05407	excluded	K562	TRA2A
SE	MCFD2	ENSG00000180398.7	chr2	-	47139681	47139797			47136161	47136316	47142861	47142919	-0.06500	0.00000	0.00044	excluded	K562	TRA2A
A3SS	RPL13	ENSG00000167526.9	chr16	+	89627634	89628159			89628003	89628159	89627347	89627471	0.21300	0.00000	0.00000	longer	K562	TRA2A
A3SS	DDX39A	ENSG00000123136.10	chr19	-	14520553	14520793			14520553	14520685	14521027	14521146	0.12000	0.00002	0.02156	longer	K562	TRA2A
A3SS	SLC18B1	ENSG00000146409.6	chr6	-	133093270	133093388			133093270	133093345	133094131	133094227	0.16100	0.00005	0.06678	longer	K562	TRA2A
A3SS	RSRC2	ENSG00000111011.13	chr12	-	123003385	123003598			123003385	123003576	123005931	123005975	0.10100	0.00006	0.07188	longer	K562	TRA2A
A3SS	D2HGDH	ENSG00000180902.12	chr2	+	242683036	242683230			242683053	242683230	242681849	242681989	-0.40400	0.00000	0.00462	shorter	K562	TRA2A
A3SS	TRIQK	ENSG00000205133.7	chr8	-	93897547	93898963			93897547	93898895	93904216	93904302	-0.37200	0.00001	0.02156	shorter	K562	TRA2A
A3SS	RPL3	ENSG00000100316.11	chr22	-	39714404	39714589			39714404	39714571	39715599	39715776	-0.06200	0.00000	0.00000	shorter	K562	TRA2A
A3SS	HCFC1	ENSG00000172534.9	chrX	-	153217964	153218541			153217964	153218409	153219057	153219221	-0.53000	0.00000	0.00189	shorter	K562	TRA2A
A3SS	RPL10	ENSG00000147403.12	chrX	+	153628815	153628967			153628898	153628967	153628143	153628282	-0.51300	0.00009	0.08421	shorter	K562	TRA2A
A3SS	PAM16	ENSG00000217930.3	chr16	-	4391368	4391584			4391368	4391505	4393207	4393292	-0.30900	0.00010	0.08608	shorter	K562	TRA2A
A3SS	MLX	ENSG00000108788.7	chr17	+	40720487	40720961			40720854	40720961	40719636	40719673	-0.27800	0.00001	0.00948	shorter	K562	TRA2A
A3SS	ADAMTSL4	ENSG00000143382.9	chr1	+	150522227	150522371			150522297	150522371	150521883	150521975	-0.19700	0.00000	0.00053	shorter	K562	TRA2A
RI	SOD2	ENSG00000112096.12	chr6	-	160100095	160103670			160100095	160100330	160103505	160103670	0.22600	0.00000	0.00000	included	HepG2	TRA2A
RI	CDC37	ENSG00000105401.2	chr19	-	10505903	10506219			10505903	10506019	10506110	10506219	0.05500	0.00026	0.09877	included	HepG2	TRA2A
RI	STX10	ENSG00000104915.10	chr19	-	13254875	13255485			13254875	13255300	13255390	13255485	0.10500	0.00010	0.05374	included	HepG2	TRA2A
RI	RBM25	ENSG00000119707.9	chr14	+	73577538	73578510			73577538	73577863	73578235	73578510	-0.10400	0.00021	0.08992	excluded	HepG2	TRA2A
RI	CDCA7	ENSG00000144354.9	chr2	+	174228545	174229717			174228545	174228623	174229522	174229717	-0.30900	0.00000	0.00005	excluded	HepG2	TRA2A
RI	ZFC3H1	ENSG00000133858.11	chr12	-	72004837	72005667			72004837	72004877	72005565	72005667	-0.27800	0.00022	0.08992	excluded	HepG2	TRA2A
RI	MXRA8	ENSG00000162576.12	chr1	-	1289572	1289889			1289572	1289612	1289733	1289889	-0.14500	0.00002	0.01549	excluded	HepG2	TRA2A
RI	CRLF1	ENSG00000006016.6	chr19	-	18704874	18705117			18704874	18704917	18705056	18705117	-0.09600	0.00000	0.00296	excluded	HepG2	TRA2A
RI	DDX41	ENSG00000183258.7	chr5	-	176943288	176943836			176943288	176943448	176943725	176943836	-0.21600	0.00002	0.01549	excluded	HepG2	TRA2A