LAMTOR4

General Information

Gene Name       : LAMTOR4
Gene ID             : ENSG00000188186.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: LAMTOR4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LAMTOR4ENSG00000188186.1015.2349.9732.60ENCSR000AEF
HepG2LAMTOR4ENSG00000188186.1084.8235.3760.09ENCSR985KAT
K562LAMTOR4ENSG00000188186.10104.6676.9290.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LAMTOR4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LAMTOR4 RNA is bound by 19 proteins.  







eCLIP assay for LAMTOR4 is not avaliable on ENCORE database.





19 proteins are bound to LAMTOR4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr79975157699751635+3'-UTR,CDS,intron-Distal4.8040748.14713K562PABPC4
chr79975143699751499+3'-UTR,CDS,intron-Distal,intron-Proximal4.339459.80019K562AQR
chr79975153799751576+3'-UTR,CDS,intron-Distal5.1010315.98596K562PABPC4
chr79975157599751633+3'-UTR,CDS,intron-Distal4.463896.67531K562APOBEC3C
chr79975149399751630+3'-UTR,CDS,intron-Distal5.227998.45066HepG2DDX55
chr79975168599751734+3'-UTR,intron-Distal3.800936.15559K562PABPC4
chr79975149899751633+3'-UTR,CDS,intron-Distal3.452543.59074K562LSM11
chr79975149099751522+3'-UTR,CDS,intron-Distal3.072954.39112K562DDX3X
chr79975155499751610+3'-UTR,CDS,intron-Distal3.513984.34553K562DDX6
chr79975148799751553+3'-UTR,CDS,intron-Distal,intron-Proximal5.2170118.30124K562DDX55
chr79975155399751626+3'-UTR,CDS,intron-Distal3.7201111.80607K562DDX55
chr79975153799751651+3'-UTR,CDS,intron-Distal5.2161524.33767HepG2LARP4
chr79975173499751798+3'-UTR,intron-Distal5.8612351.12881K562PABPC4
chr79975174799751790+3'-UTR,intron-Distal4.898846.66940HepG2LARP4
chr79975148999751537+3'-UTR,CDS,intron-Distal,intron-Proximal6.5690717.39935K562PABPC4
chr79975149499751537+3'-UTR,CDS,intron-Distal3.693626.89080HepG2LARP4
chr79975153799751636+3'-UTR,CDS,intron-Distal3.277795.37958HepG2LSM11
chr79974657299746596+5'-UTR3.776213.14867K562DDX55
chr79974712199747174+CDS,intron-Distal,intron-Proximal4.5691522.55250K562DDX3X
chr79975114099751186+CDS,intron-Proximal5.0737311.65116K562AQR
chr79975118699751251+CDS,intron-Distal,intron-Proximal5.360597.23718K562AQR
chr79974704699747132+CDS,intron-Distal,intron-Proximal3.9573111.96691HepG2PRPF4
chr79975102299751141+CDS,intron-Proximal3.477489.28297K562DDX55
chr79974711699747177+CDS,intron-Distal,intron-Proximal3.329895.86838K562FTO
chr79974712199747180+CDS,intron-Distal,intron-Proximal3.5945713.62538K562PABPC4
chr79974712199747175+CDS,intron-Distal,intron-Proximal4.631698.81606K562DDX55
chr79975101699751069+CDS,intron-Proximal3.212096.28230HepG2PPIG
chr79975111499751140+CDS6.7708812.00747K562PABPC4
chr79975112599751141+CDS,intron-Proximal4.174604.66602K562DDX3X
chr79975112299751139+CDS3.138083.68829K562YBX3
chr79975105799751114+CDS4.540258.50867K562PABPC4
chr79975106999751145+CDS,intron-Proximal4.7290611.38699HepG2PPIG
chr79974711699747156+CDS,intron-Distal,intron-Proximal4.342236.83552HepG2DDX3X
chr79975095999751029+CDS,intron-Proximal4.361687.39218K562SF3B4
chr79974718699747239+CDS,intron-Distal,intron-Proximal4.105797.13970HepG2PRPF8
chr79975098699751034+CDS,intron-Proximal4.035845.26367K562AQR
chr79974711299747166+CDS,intron-Distal,intron-Proximal3.274133.46866HepG2U2AF2
chr79974718799747203+CDS,intron-Distal,intron-Proximal3.191948.12394K562DDX3X
chr79974687799746958+intron-Distal4.952833.19125K562GTF2F1
chr79974693899747046+intron-Distal,intron-Proximal5.5318624.30902HepG2PRPF4
chr79974704399747089+intron-Distal,intron-Proximal4.535144.65580K562GTF2F1
chr79974677199746871+intron-Distal,intron-Proximal5.3952310.15972HepG2GTF2F1
chr79974674199746825+intron-Distal,intron-Proximal5.6044525.60461HepG2PRPF4
chr79974666599746720+intron-Distal,intron-Proximal4.3872810.86121HepG2PRPF4
chr79974689199746938+intron-Distal4.4606311.65407HepG2PRPF4
chr79974676599746873+intron-Distal,intron-Proximal6.4055321.03377HepG2FAM120A
chr79974720299747243+intron-Distal,intron-Proximal4.764279.46915K562AQR
chr79974690099746950+intron-Distal3.158334.46248HepG2FAM120A
chr79974695899747034+intron-Distal,intron-Proximal5.221134.65580K562GTF2F1
chr79974695099747037+intron-Distal,intron-Proximal3.620748.80245HepG2FAM120A
chr79974682599746884+intron-Distal4.3516313.49785HepG2PRPF4
chr79974675599746880+intron-Distal,intron-Proximal4.781396.44863HepG2CSTF2T
chr79974674899746876+intron-Distal,intron-Proximal4.5156110.61789HepG2RBFOX2
chr79974697199747025+intron-Distal,intron-Proximal4.709926.68679HepG2GTF2F1
chr79974676199746877+intron-Distal,intron-Proximal5.558916.14086K562GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LAMTOR4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LAMTOR4 is not available on ENCORE database.

  • 56 RBPs can affect the levels of LAMTOR4.  








The Knockdown/knockout RNA-Seq assay for LAMTOR4 is not available on ENCORE database.





56 RBPs can affect the gene expression of LAMTOR4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LAMTOR4ENSG00000188186.6213.38390320.63600-0.587504.256703.53350HepG2ACO1
LAMTOR4ENSG00000188186.61050.68370629.819800.738206.302605.53690HepG2AKAP1
LAMTOR4ENSG00000188186.6688.81350495.083100.476303.090002.27460HepG2CIRBP
LAMTOR4ENSG00000188186.6443.50180264.201600.747203.807502.90380HepG2CNOT7
LAMTOR4ENSG00000188186.6592.67070476.419000.314902.812802.06520HepG2DAZAP1
LAMTOR4ENSG00000188186.6317.66300470.08280-0.565404.436703.41860HepG2EIF4G1
LAMTOR4ENSG00000188186.6497.13930681.64150-0.455404.568703.83110HepG2ETF1
LAMTOR4ENSG00000188186.6189.95220273.44620-0.525602.500601.75200HepG2FUBP3
LAMTOR4ENSG00000188186.6718.34470515.288500.479203.017102.32340HepG2G3BP1
LAMTOR4ENSG00000188186.6366.72510522.05830-0.509503.181502.43420HepG2HNRNPK
LAMTOR4ENSG00000188186.6747.02910558.878000.418502.283301.70650HepG2MATR3
LAMTOR4ENSG00000188186.6375.15850509.27480-0.440902.426201.74640HepG2PABPC4
LAMTOR4ENSG00000188186.6138.71460252.33270-0.863202.939302.10830HepG2PRPF8
LAMTOR4ENSG00000188186.6380.41790504.28200-0.406602.252601.74920HepG2PTBP1
LAMTOR4ENSG00000188186.6404.75380546.04480-0.432002.645702.03260HepG2QKI
LAMTOR4ENSG00000188186.6425.51610561.17640-0.399202.207701.71350HepG2NELFE
LAMTOR4ENSG00000188186.6348.43300522.73390-0.585203.945603.22630HepG2RECQL
LAMTOR4ENSG00000188186.6360.92110264.082200.450602.374301.73390HepG2RPLP0
LAMTOR4ENSG00000188186.6381.80830524.93420-0.459302.178501.64470HepG2SF3B4
LAMTOR4ENSG00000188186.6496.51370643.46170-0.374003.334302.80030HepG2SRFBP1
LAMTOR4ENSG00000188186.6331.35150445.31460-0.426502.743202.11900HepG2SRSF5
LAMTOR4ENSG00000188186.6233.72360445.82060-0.931707.770006.92970HepG2SRSF9
LAMTOR4ENSG00000188186.6329.44660452.54660-0.458002.899702.04620HepG2TIA1
LAMTOR4ENSG00000188186.6344.95550202.704500.766905.890205.21210HepG2TIAL1
LAMTOR4ENSG00000188186.6277.43350204.556200.439502.395001.86270HepG2TRIM56
LAMTOR4ENSG00000188186.6476.59140298.207000.676302.607801.63440HepG2UPF2
LAMTOR4ENSG00000188186.6904.59550534.042600.7602013.0914011.95390K562AGGF1
LAMTOR4ENSG00000188186.6843.77900586.880400.523705.111503.67740K562AKAP8
LAMTOR4ENSG00000188186.61085.24340555.707500.9655015.5975013.83090K562AKAP8L
LAMTOR4ENSG00000188186.6752.59550597.587500.332602.434901.46000K562DDX3X
LAMTOR4ENSG00000188186.6448.33500581.18770-0.374402.861702.19930K562DDX47
LAMTOR4ENSG00000188186.6770.42140542.744500.505302.921501.60340K562EEF2
LAMTOR4ENSG00000188186.6165.74270314.78990-0.925404.074402.82660K562EIF3A
LAMTOR4ENSG00000188186.6485.46340322.079300.591804.332203.25550K562FIP1L1
LAMTOR4ENSG00000188186.6265.18240444.21590-0.744305.251703.60640K562FKBP4
LAMTOR4ENSG00000188186.633.27490210.34630-2.6603021.3337018.81100K562G3BP2
LAMTOR4ENSG00000188186.61600.928301064.437800.588707.388306.13850K562GRSF1
LAMTOR4ENSG00000188186.6362.20540511.64510-0.498303.323502.67710K562HNRNPC
LAMTOR4ENSG00000188186.6428.09700264.930400.692204.462403.26000K562HNRNPM
LAMTOR4ENSG00000188186.6789.49860473.887200.736302.727701.71000K562IGF2BP2
LAMTOR4ENSG00000188186.6885.52630589.702900.586404.982903.81220K562KIF1C
LAMTOR4ENSG00000188186.6321.43410495.47520-0.624304.769302.87340K562LARP7
LAMTOR4ENSG00000188186.6860.06720660.622000.380502.362701.53210K562MBNL1
LAMTOR4ENSG00000188186.6644.99950463.051800.478002.596701.74720K562NAA15
LAMTOR4ENSG00000188186.6699.49100516.897600.436302.549201.32160K562NONO
LAMTOR4ENSG00000188186.6590.59560365.646200.691606.085004.78820K562PPIG
LAMTOR4ENSG00000188186.6616.72730483.723500.350402.391101.76630K562PTBP1
LAMTOR4ENSG00000188186.61195.54860551.024401.1174018.9060017.52010K562PUS1
LAMTOR4ENSG00000188186.6340.41330235.405300.532003.401301.39210K562QKI
LAMTOR4ENSG00000188186.6878.39010536.960600.7099010.226409.11190K562RBM15
LAMTOR4ENSG00000188186.6733.649301009.55090-0.460604.274302.27170K562RBM17
LAMTOR4ENSG00000188186.6293.28870218.752300.422902.183001.42410K562SF3B4
LAMTOR4ENSG00000188186.6458.82960610.80540-0.412803.704302.64030K562SRPK2
LAMTOR4ENSG00000188186.6661.39240474.229100.479803.225002.46650K562SRSF1
LAMTOR4ENSG00000188186.6694.62450447.920300.632905.849004.21860K562SRSF5
LAMTOR4ENSG00000188186.6233.86220327.10380-0.484103.011601.66760K562SSB
LAMTOR4ENSG00000188186.681.62940206.48220-1.338904.869802.70980K562TAF15
LAMTOR4ENSG00000188186.6834.56590479.910200.798207.689706.44140K562TARDBP
LAMTOR4ENSG00000188186.6678.20520462.938300.550804.708903.59800K562TIA1
LAMTOR4ENSG00000188186.6717.29130454.376200.658606.166504.38140K562TRA2A
LAMTOR4ENSG00000188186.6101.20460210.60120-1.057206.946905.68220K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LAMTOR4 is not available on ENCORE database.





10 RBPs can affect the splicing of LAMTOR4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELAMTOR4ENSG00000188186.6chr7+9975033899750380997469799974720299751022997511400.076000.000110.08718includedHepG2TRA2A
SELAMTOR4ENSG00000188186.6chr7+997503389975038099747056997472029975102299751140-0.224000.008940.08347excludedHepG2U2AF2
SELAMTOR4ENSG00000188186.6chr7+9975027599750380997471219974720299751022997511400.061000.001290.09692includedHepG2SRSF7
SELAMTOR4ENSG00000188186.6chr7+997502759975038099747121997472029975102299751140-0.137000.000350.02090excludedHepG2SFPQ
SELAMTOR4ENSG00000188186.6chr7+997502759975038099747121997472029975102299751140-0.051000.000000.00000excludedHepG2MATR3
SELAMTOR4ENSG00000188186.6chr7+9975027599750380997471219974720299751022997511400.075000.003430.06092includedK562U2AF1
SELAMTOR4ENSG00000188186.6chr7+9975033899750380997470569974720299751022997511400.054000.000170.03465includedK562UPF1
A3SSLAMTOR4ENSG00000188186.6chr7+9974705699747202997471219974720299746535997465980.057000.001560.05399longerK562U2AF2
A5SSLAMTOR4ENSG00000188186.6chr7+9974712199747202997471219974718899751022997511400.061000.000780.03111longerK562PUS1
A5SSLAMTOR4ENSG00000188186.6chr7+9974708799747315997470879974720299751022997511400.055000.000000.00000longerK562AQR
A5SSLAMTOR4ENSG00000188186.6chr7+9974660099746767997466009974667699747121997473150.137000.000110.01672longerK562EFTUD2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LAMTOR4 is not avaliable on ENCORE database.