SRFBP1

General Information

Gene Name       : SRFBP1
Gene ID             : ENSG00000151304.5
Essential Gene : Yes

Functions

Localization(RBPImage: SRFBP1)

Domains (AlphaFold: SRFBP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SRFBP1ENSG00000151304.511.759.7310.74ENCSR000AEF
HepG2SRFBP1ENSG00000151304.53.788.636.21ENCSR985KAT
K562SRFBP1ENSG00000151304.59.4110.9810.20ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq SRFBP1-BGKLV21-K562ENCSR813NZPSRFBP1K562ReleasedENCSR572FFX   shRNAKD% = 54.6,50.8
knockdown followed by RNA-seq SRFBP1-BGHLV37-HepG2ENCSR153GKSSRFBP1HepG2ReleasedENCSR997HCQ   shRNAKD% = 67.1,68.9






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
SRFBP1ENCAB974FYTA303-044A1Released, ENCODE3Released, ENCODE3BGHLV37-57, Released, ENCODE3BGKLV21-59, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SRFBP1K562shRNAENCSR813NZPENCSR572FFXSRFBP1_BGKLV21_59_17586,SRFBP1_BGKLV21_60_17587non-target_BGKLV21_1,non-target_BGKLV21_254.6,50.8ReleasedENCODE3
SRFBP1HepG2shRNABGHLV18-59,BGHLV18-60BGHLV18-1,BGHLV18-2NotSatisfiedENCODE3
SRFBP1HepG2shRNABGHLV23-43,BGHLV23-44BGHLV23-1,BGHLV23-2NotSatisfiedENCODE3
SRFBP1HepG2shRNAENCSR153GKSENCSR997HCQSRFBP1_BGHLV37-57,SRFBP1_BGHLV37-58NT_BGHLV37-1,NT_BGHLV37-267.1,68.9ReleasedENCODE3
SRFBP1HepG2shRNABGHLV37-59,BGHLV37-60BGHLV37-1,BGHLV37-238.6,32.4NotSatisfiedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    SRFBP1: Click to RBP Image Database
  • Nuclei
  • Nucleolus
  • Cytoplasm
  • Compartment/Organelle
  • Golgi












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    SRFBP1Product_ID: A303-044A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: SRFBP1-human    		 HepG2_Bethyl_A303-044A_1_SRFBP1.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using SRFBP1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-SRFBP1 antibody (lanes under 'SRFBP1').
    		 SRFBP1-HEPG2.png<br>Caption: Western blot following shRNA against SRFBP1 in HepG2 whole cell lysate using SRFBP1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against SRFBP1.SRFBP1 protein appears as the green band, GAPDH serves as a control and appears in red.
    		 K562_Bethyl_A303-044A_1_SRFBP1.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using SRFBP specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-SRFBP antibody (lanes under 'SRFBP').
    		 SRFBP1-K562.png<br>Caption: Western blot following shRNA against SRFBP1 in k562 whole cell lysate using SRFBP1 specific antibody. Lane 1 is a ladder, lane 2 is k562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against SRFBP1. SRFBP1 protein appears as the green band, while GAPDH serves as a control and appears in red.








    RNA Targets

    • eCLIP assay for SRFBP1 is not avaliable on ENCORE database.



    Proteins bound to RNA
    • SRFBP1 RNA is bound by 8 proteins.  







    eCLIP assay for SRFBP1 is not avaliable on ENCORE database.





    8 proteins are bound to SRFBP1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr5121362704121362775+CDS,intron-Distal4.144583.71613K562UCHL5
    chr5121356222121356357+CDS3.160224.83973K562ZNF622
    chr5121356263121356347+CDS3.570804.06757K562UCHL5
    chr5121356493121356561+CDS,intron-Proximal4.577074.13847K562AQR
    chr5121362681121362743+CDS,intron-Distal4.261623.02457HepG2BCLAF1
    chr5121343310121343365+intron-Distal5.438876.34931HepG2XPO5
    chr5121329627121329743+intron-Distal3.724583.45805K562KHSRP
    chr5121335289121335405+intron-Distal3.982083.06150K562KHSRP
    chr5121311089121311206+intron-Distal,intron-Proximal4.287885.25174K562KHSRP
    chr5121365979121366047+intron-Distal3.463275.35486K562UPF1
    chr5121340770121340868+intron-Distal4.220303.92684K562KHSRP
    chr5121343213121343368+intron-Distal3.487403.68481HepG2HNRNPM
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for SRFBP1 is not avaliable on ENCORE database.



    Diffrential Expression
    • 12,629 differentially expressed genes after Knockdown/Knockout SRFBP1 protein.  





    • 56 RBPs can affect the levels of SRFBP1.  







    12,629 differentially expressed genes after Knockdown/Knockout SRFBP1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 12,629 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    DPM1ENSG00000000419.82888.624102417.466200.256803.887903.32420HepG2SRFBP1
    SCYL3ENSG00000000457.9358.05960195.434400.873408.172107.43700HepG2SRFBP1
    C1orf112ENSG00000000460.12210.10120535.01320-1.3485022.6022021.52960HepG2SRFBP1
    FUCA2ENSG00000001036.93781.788804880.53800-0.368009.264608.49600HepG2SRFBP1
    GCLCENSG00000001084.66368.207402151.452801.56550139.59630137.43010HepG2SRFBP1
    STPG1ENSG00000001460.13317.67130162.663700.965508.424907.68070HepG2SRFBP1
    NIPAL3ENSG00000001461.12856.27260477.336900.8430015.0188014.09870HepG2SRFBP1
    LAS1LENSG00000001497.12858.564101257.25120-0.550309.511508.73450HepG2SRFBP1
    ENPP4ENSG00000001561.627.9791010.026401.480402.041801.59100HepG2SRFBP1
    SEMA3FENSG00000001617.7535.12420992.39590-0.8910019.3125018.30180HepG2SRFBP1
    ANKIB1ENSG00000001629.53161.500501759.285100.8455034.6094033.35810HepG2SRFBP1
    CYP51A1ENSG00000001630.113425.896805565.63330-0.700103.619303.06980HepG2SRFBP1
    MYH16ENSG00000002079.896.1490018.550002.3738010.610909.80140HepG2SRFBP1
    BADENSG00000002330.9305.34130233.174700.388901.934201.49270HepG2SRFBP1
    LAP3ENSG00000002549.81573.853902851.75450-0.8575033.4355032.19740HepG2SRFBP1
    CD99ENSG00000002586.132635.409603067.79590-0.219203.257402.72770HepG2SRFBP1
    MAD1L1ENSG00000002822.11506.63010659.03670-0.379402.639302.14550HepG2SRFBP1
    SNX11ENSG00000002919.10890.97030502.371600.8265014.5090013.60060HepG2SRFBP1
    M6PRENSG00000003056.33554.454703070.051200.211302.815102.31040HepG2SRFBP1
    CYP26B1ENSG00000003137.454.3383011.387502.254406.083005.41930HepG2SRFBP1
    DBNDD1ENSG00000003249.93073.871901325.051201.2139020.1606019.13280HepG2SRFBP1
    ALS2ENSG00000003393.102858.154501670.242200.7749028.0048026.84590HepG2SRFBP1
    CASP10ENSG00000003400.101458.656501166.922000.321804.321403.73540HepG2SRFBP1
    CFLARENSG00000003402.154761.239702903.590800.7134029.6723028.48320HepG2SRFBP1
    TFPIENSG00000003436.1020701.9757013841.710400.5806029.1268027.94860HepG2SRFBP1
    ARF5ENSG00000004059.61974.356801475.170400.420407.493206.77920HepG2SRFBP1
    SARM1ENSG00000004139.9135.6484033.965201.9976011.4235010.59350HepG2SRFBP1
    POLDIP2ENSG00000004142.71945.426503073.14730-0.6596021.0079019.96380HepG2SRFBP1
    PLXND1ENSG00000004399.82176.497003816.21880-0.8101035.9846034.71470HepG2SRFBP1
    AK2ENSG00000004455.122676.722404271.41780-0.6742025.5200024.39890HepG2SRFBP1
    FKBP4ENSG00000004478.52501.301102897.45730-0.212103.016702.50060HepG2SRFBP1
    RBM6ENSG00000004534.105675.923405112.196200.150801.849101.41430HepG2SRFBP1
    CAMKK1ENSG00000004660.1054.0025096.73460-0.841001.932301.49100HepG2SRFBP1
    CCDC132ENSG00000004766.11718.25420573.061800.325702.554402.06630HepG2SRFBP1
    ARHGAP33ENSG00000004777.1449.97140301.40100-2.5925035.7103034.44380HepG2SRFBP1
    NDUFAB1ENSG00000004779.52281.356402871.79350-0.332106.064505.40180HepG2SRFBP1
    CDC27ENSG00000004897.73340.123404538.48970-0.4423012.0198011.17090HepG2SRFBP1
    HCCSENSG00000004961.10914.50250577.311700.6635011.1297010.30650HepG2SRFBP1
    DVL2ENSG00000004975.7984.826401327.26350-0.430506.349705.67510HepG2SRFBP1
    PRSS22ENSG00000005001.541.317002.481904.057108.194807.45820HepG2SRFBP1
    UPF1ENSG00000005007.83084.479303556.62330-0.205503.153302.63050HepG2SRFBP1
    SLC25A5ENSG00000005022.54637.919809116.79680-0.9750066.6334065.01580HepG2SRFBP1
    POLR2JENSG00000005075.11660.75320827.08370-0.323903.008202.49270HepG2SRFBP1
    DHX33ENSG00000005100.81602.702202272.88450-0.5040011.3968010.56750HepG2SRFBP1
    THSD7AENSG00000005108.11289.0603014.337504.3334057.7610056.23670HepG2SRFBP1
    LIG3ENSG00000005156.7406.924601374.97470-1.7566073.6245071.94350HepG2SRFBP1
    ACSM3ENSG00000005187.7267.779201216.35120-2.1834093.5985091.74300HepG2SRFBP1
    AC004381.6ENSG00000005189.15156.63200436.48000-1.4785021.5316020.47880HepG2SRFBP1
    CIAPIN1ENSG00000005194.102562.098001969.480900.379407.355706.64570HepG2SRFBP1
    FAM214BENSG00000005238.15657.78960240.417701.4520030.3814029.18390HepG2SRFBP1
    MSL3ENSG00000005302.13588.65140342.442600.781509.940409.15070HepG2SRFBP1
    CREBBPENSG00000005339.82216.291102815.25740-0.345106.591805.90950HepG2SRFBP1
    WDR54ENSG00000005448.12100.87140343.50790-1.7678023.5999022.51030HepG2SRFBP1
    CROTENSG00000005469.71237.49050398.388401.6351059.0630057.51740HepG2SRFBP1
    ABCB4ENSG00000005471.11545.67480896.02510-0.7155011.5861010.75060HepG2SRFBP1
    KMT2EENSG00000005483.152906.742502308.383100.332406.185805.51860HepG2SRFBP1
    RHBDD2ENSG00000005486.12969.13820828.574000.226001.725601.30110HepG2SRFBP1
    SOX8ENSG00000005513.9117.4301020.520802.5165013.7462012.85580HepG2SRFBP1
    ZNF195ENSG00000005801.121087.81290821.029500.405804.975104.35840HepG2SRFBP1
    MYCBP2ENSG00000005810.132826.203102129.429200.408308.749107.99540HepG2SRFBP1
    FBXL3ENSG00000005812.61180.40390705.443500.7426015.9340014.99210HepG2SRFBP1
    ITGALENSG00000005844.1355.06930111.74980-1.021003.688603.13570HepG2SRFBP1
    PDK2ENSG00000005882.7279.99010924.83490-1.7238052.2868050.82630HepG2SRFBP1
    ITGA3ENSG00000005884.13299.96580193.833100.629902.389201.91210HepG2SRFBP1
    ZFXENSG00000005889.11807.722901416.49680-0.8104020.1037019.07680HepG2SRFBP1
    LAMP2ENSG00000005893.114076.835205700.90460-0.4837015.3687014.43960HepG2SRFBP1
    ITGA2BENSG00000005961.1327.3076053.32210-0.965402.021801.57310HepG2SRFBP1
    ASB4ENSG00000005981.8540.39910236.648301.1912018.4552017.46410HepG2SRFBP1
    GDE1ENSG00000006007.71750.957402684.07130-0.6163017.8454016.86620HepG2SRFBP1
    CRLF1ENSG00000006016.62841.121309140.19600-1.6858035.0416033.78510HepG2SRFBP1
    OSBPL7ENSG00000006025.7507.26340384.759200.398702.799702.29590HepG2SRFBP1
    TMEM98ENSG00000006042.71255.175402689.50330-1.0995050.9283049.48580HepG2SRFBP1
    MAP3K14ENSG00000006062.9236.28250164.505300.522302.599502.10790HepG2SRFBP1
    SYNRGENSG00000006114.111825.250901286.973300.5040010.539109.73150HepG2SRFBP1
    AP2B1ENSG00000006125.127268.347706466.388500.168602.689802.19260HepG2SRFBP1
    CX3CL1ENSG00000006210.6842.045803626.70490-2.10670179.41950177.03060HepG2SRFBP1
    SPATA20ENSG00000006282.151166.434202947.91000-1.3376074.2440072.55810HepG2SRFBP1
    TNFRSF12AENSG00000006327.93570.28230694.308702.36230211.57640208.98820HepG2SRFBP1
    MAP3K9ENSG00000006432.112194.33850732.006001.5838083.7259081.95810HepG2SRFBP1
    RALAENSG00000006451.31564.153301139.829100.456507.537506.82170HepG2SRFBP1
    BAIAP2L1ENSG00000006453.94082.506801157.665101.81810147.93240145.70850HepG2SRFBP1
    JHDM1DENSG00000006459.65130.364803050.404100.7500034.3360033.08730HepG2SRFBP1
    ALDH3B1ENSG00000006534.1154.27880261.05520-2.2659025.7796024.65230HepG2SRFBP1
    PHTF2ENSG00000006576.12874.86500570.622900.616409.297508.52820HepG2SRFBP1
    FARP2ENSG00000006607.92078.667201695.456100.293904.254803.67240HepG2SRFBP1
    GGCTENSG00000006625.13424.35240934.38080-1.1387027.3734026.22020HepG2SRFBP1
    DBF4ENSG00000006634.3355.45090803.70580-1.1770024.6946023.58720HepG2SRFBP1
    IFRD1ENSG00000006652.93393.516701224.517801.4705094.0517092.19020HepG2SRFBP1
    GTF2IRD1ENSG00000006704.61553.28600931.584900.7375017.7091016.73130HepG2SRFBP1
    VPS41ENSG00000006715.111019.308001236.35530-0.278503.022902.50650HepG2SRFBP1
    ARHGAP44ENSG00000006740.12239.18740153.512300.639703.704203.15040HepG2SRFBP1
    ELAC2ENSG00000006744.141333.402201659.83960-0.315904.463703.87110HepG2SRFBP1
    ARSDENSG00000006756.11902.03580517.541000.8014014.2144013.31360HepG2SRFBP1
    ADIPOR2ENSG00000006831.95183.951604483.290900.209403.405502.86730HepG2SRFBP1
    PROM1ENSG00000007062.71176.88840931.511200.337203.974803.40620HepG2SRFBP1
    PAFAH1B1ENSG00000007168.84262.274402920.307100.5454017.9989017.01680HepG2SRFBP1
    KIAA0100ENSG00000007202.102592.748206015.21720-1.2141088.4548086.64800HepG2SRFBP1
    GAS7ENSG00000007237.1471.56840147.80260-1.046304.174503.59610HepG2SRFBP1
    TRAPPC6AENSG00000007255.6156.83030221.24550-0.496402.308601.83750HepG2SRFBP1
    SCN4AENSG00000007314.75.6907019.15970-1.751401.901901.46320HepG2SRFBP1
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    56 RBPs can affect the gene expression of SRFBP1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    SRFBP1ENSG00000151304.5386.21670255.192500.597702.923802.37860HepG2AKAP1
    SRFBP1ENSG00000151304.5127.94630193.20670-0.594602.923302.24410HepG2CKAP4
    SRFBP1ENSG00000151304.5159.11350248.73710-0.644603.046702.32940HepG2CPSF6
    SRFBP1ENSG00000151304.5132.48540209.94210-0.664202.110601.56450HepG2DDX6
    SRFBP1ENSG00000151304.5109.38820168.00370-0.619002.883202.21990HepG2DNAJC2
    SRFBP1ENSG00000151304.594.32940201.90040-1.097904.818004.04710HepG2EIF2S1
    SRFBP1ENSG00000151304.5123.67610208.82360-0.755702.601501.95640HepG2G3BP1
    SRFBP1ENSG00000151304.5102.28020171.12210-0.742502.829602.17630HepG2HNRNPA1
    SRFBP1ENSG00000151304.5107.05340190.34250-0.830303.622102.83670HepG2HNRNPC
    SRFBP1ENSG00000151304.5171.85740250.41080-0.543102.595701.90050HepG2HNRNPF
    SRFBP1ENSG00000151304.5127.40510208.11710-0.708004.132503.32150HepG2HNRNPL
    SRFBP1ENSG00000151304.5125.10290189.08400-0.595902.812402.20040HepG2HNRNPU
    SRFBP1ENSG00000151304.5171.10710246.58760-0.527202.093401.45730HepG2IGF2BP1
    SRFBP1ENSG00000151304.5126.21140196.82630-0.641103.269302.61350HepG2PUS1
    SRFBP1ENSG00000151304.5376.53210282.589800.414002.275001.79250HepG2RBM22
    SRFBP1ENSG00000151304.5327.11660225.427600.537002.141101.54670HepG2SF3A3
    SRFBP1ENSG00000151304.559.98930319.18150-2.4116033.5835032.34250HepG2SRFBP1
    SRFBP1ENSG00000151304.5305.26620212.646600.521502.919602.43740HepG2SRSF1
    SRFBP1ENSG00000151304.5162.43820246.00490-0.598803.038402.31430HepG2SRSF7
    SRFBP1ENSG00000151304.5179.04210277.13680-0.630303.942203.35360HepG2SSB
    SRFBP1ENSG00000151304.5155.29810262.31620-0.756304.047803.19060HepG2TARDBP
    SRFBP1ENSG00000151304.5112.54940183.72770-0.707002.538202.05530HepG2TIAL1
    SRFBP1ENSG00000151304.5112.77300185.37300-0.717003.879503.23450HepG2TRIM56
    SRFBP1ENSG00000151304.5359.70880172.456901.060507.772506.72340HepG2U2AF1
    SRFBP1ENSG00000151304.588.09410169.50250-0.944203.077702.01950HepG2UPF2
    SRFBP1ENSG00000151304.5356.52400193.015400.885207.811906.88740HepG2UTP3
    SRFBP1ENSG00000151304.5105.08070182.19610-0.794002.872402.13330HepG2XRN2
    SRFBP1ENSG00000151304.5135.27140219.87390-0.700804.283103.64190HepG2ZNF622
    SRFBP1ENSG00000151304.5451.96830282.982800.675402.707101.53970K562AARS
    SRFBP1ENSG00000151304.5339.44910252.817200.425002.288901.76480K562AGGF1
    SRFBP1ENSG00000151304.5346.11950263.064600.395801.856701.31680K562AKAP8L
    SRFBP1ENSG00000151304.5808.13430599.062900.431802.310301.76690K562AQR
    SRFBP1ENSG00000151304.5373.81700276.012100.437502.629001.73980K562ATP5C1
    SRFBP1ENSG00000151304.51007.50780604.636400.7366013.2829011.96600K562DDX47
    SRFBP1ENSG00000151304.5388.25660283.096100.455602.971002.05780K562DKC1
    SRFBP1ENSG00000151304.5375.26350536.84940-0.516604.423303.54080K562EIF2S2
    SRFBP1ENSG00000151304.5451.94460269.123900.747807.382506.45840K562FXR1
    SRFBP1ENSG00000151304.5561.53550715.47420-0.349502.069001.40870K562GRSF1
    SRFBP1ENSG00000151304.5176.86680309.73790-0.808405.157304.36520K562HNRNPC
    SRFBP1ENSG00000151304.5188.94390276.55320-0.549602.660901.54460K562HNRNPF
    SRFBP1ENSG00000151304.5385.68430546.40350-0.502503.783102.51990K562HNRNPL
    SRFBP1ENSG00000151304.5257.69130371.69600-0.528503.093302.16500K562METAP2
    SRFBP1ENSG00000151304.5366.35910219.221100.740803.141802.19160K562NAA15
    SRFBP1ENSG00000151304.5325.69330454.73180-0.481504.085203.19790K562NSUN2
    SRFBP1ENSG00000151304.5193.54650304.90030-0.655703.351801.72010K562NUSAP1
    SRFBP1ENSG00000151304.5186.72350302.36720-0.695403.983302.22460K562PHF6
    SRFBP1ENSG00000151304.5411.00030553.20150-0.428702.639301.84150K562PPIG
    SRFBP1ENSG00000151304.5493.61130303.458900.701805.259204.22500K562PRPF8
    SRFBP1ENSG00000151304.5144.53350277.70050-0.942105.689604.31760K562PSIP1
    SRFBP1ENSG00000151304.5470.43040353.223800.413302.457401.82560K562PTBP1
    SRFBP1ENSG00000151304.51067.97650838.478700.348902.692301.88650K562PUF60
    SRFBP1ENSG00000151304.5404.00090260.910400.630703.690203.07600K562PUS1
    SRFBP1ENSG00000151304.5334.83410254.199200.397401.970801.45520K562RBM15
    SRFBP1ENSG00000151304.5476.89290309.172100.625204.003903.01780K562RPS19
    SRFBP1ENSG00000151304.557.75480240.13510-2.0558016.9834013.97720K562SRFBP1
    SRFBP1ENSG00000151304.5171.92630253.50140-0.560202.448201.46720K562SRSF4
    SRFBP1ENSG00000151304.5463.85620276.603500.745806.852605.54850K562SYNCRIP
    SRFBP1ENSG00000151304.5216.76210338.07040-0.641202.850802.01820K562TIA1
    SRFBP1ENSG00000151304.5151.68470267.10840-0.816304.366903.17260K562TIAL1
    SRFBP1ENSG00000151304.5174.96990283.70370-0.697303.931702.76170K562TRIM56
    SRFBP1ENSG00000151304.5410.50110287.686000.512802.749601.66030K562U2AF1
    SRFBP1ENSG00000151304.5334.52280482.16050-0.527403.968603.12140K562UPF1
    SRFBP1ENSG00000151304.5288.50160412.57160-0.516103.404602.43600K562WDR3
    SRFBP1ENSG00000151304.5559.85460429.011800.383903.204702.29980K562WDR43
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for SRFBP1 is not available on ENCORE database.





    2 RBPs can affect the splicing of SRFBP1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SESRFBP1ENSG00000151304.5chr5+121358064121358102121355782121356497121362636121364314-0.163000.000040.00069excludedK562AQR
    SESRFBP1ENSG00000151304.5chr5+121358064121358102121355782121356497121362636121364314-0.161000.005030.06243excludedK562PUS1

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for SRFBP1 is not avaliable on ENCORE database.