CIAPIN1

General Information

Gene Name       : CIAPIN1
Gene ID             : ENSG00000005194.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CIAPIN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CIAPIN1ENSG00000005194.1437.2336.4936.86ENCSR000AEF
HepG2CIAPIN1ENSG00000005194.1442.3751.9047.13ENCSR985KAT
K562CIAPIN1ENSG00000005194.1462.0258.7760.40ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CIAPIN1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CIAPIN1 RNA is bound by 8 proteins.  







eCLIP assay for CIAPIN1 is not avaliable on ENCORE database.





8 proteins are bound to CIAPIN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165746268557462786-3'-UTR,intron-Distal,intron-Proximal3.850123.34655HepG2AKAP1
chr165746790857467959-3'-UTR,CDS,intron-Distal,intron-Proximal5.549619.75034HepG2PRPF8
chr165746259957462634-3'-UTR,intron-Distal4.095897.46470K562YBX3
chr165746799057468125-3'-UTR,CDS,intron-Distal,intron-Proximal3.384184.31813HepG2G3BP1
chr165746644157466507-3'-UTR,CDS,intron-Distal,intron-Proximal5.429358.03507K562AQR
chr165746263457462666-3'-UTR,intron-Distal3.608737.65255K562YBX3
chr165746503457465167-3'-UTR,CDS,intron-Distal,intron-Proximal3.176894.68592HepG2PPIG
chr165746259657462677-3'-UTR,intron-Distal3.928493.64119HepG2UPF1
chr165746270157462801-3'-UTR,intron-Distal,intron-Proximal4.206898.34773K562YBX3
chr165746415357464300-3'-UTR,CDS,intron-Distal,intron-Proximal4.378834.59919HepG2AQR
chr165746504657465145-3'-UTR,CDS,intron-Distal,intron-Proximal3.883453.12746HepG2GRWD1
chr165747303057473126-5'-UTR,CDS,intron-Distal,intron-Proximal3.405173.54718K562PRPF8
chr165747469057474745-CDS,intron-Distal3.239636.35478K562YBX3
chr165747474557474785-CDS,intron-Distal,intron-Proximal4.200854.96452K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CIAPIN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CIAPIN1 is not available on ENCORE database.

  • 75 RBPs can affect the levels of CIAPIN1.  








The Knockdown/knockout RNA-Seq assay for CIAPIN1 is not available on ENCORE database.





75 RBPs can affect the gene expression of CIAPIN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CIAPIN1ENSG00000005194.101254.81570873.033800.523303.805002.70940HepG2ABCF1
CIAPIN1ENSG00000005194.101421.29580987.602900.525109.936808.92960HepG2ACO1
CIAPIN1ENSG00000005194.102912.503601603.135100.8613010.953609.96350HepG2AKAP1
CIAPIN1ENSG00000005194.10658.15040992.11610-0.592109.047507.75900HepG2AKAP8L
CIAPIN1ENSG00000005194.101785.256401326.474800.428403.524602.63960HepG2ASCC1
CIAPIN1ENSG00000005194.10834.998201249.38290-0.581404.664903.44770HepG2BCCIP
CIAPIN1ENSG00000005194.10815.759001085.59000-0.412302.714401.82290HepG2BCLAF1
CIAPIN1ENSG00000005194.10867.04880626.151000.469503.727903.04400HepG2BOP1
CIAPIN1ENSG00000005194.101235.37020987.235700.323404.217903.43000HepG2CKAP4
CIAPIN1ENSG00000005194.101842.822301441.170500.354603.427002.72780HepG2CELF1
CIAPIN1ENSG00000005194.101126.90210913.321100.303103.647602.70790HepG2DDX19B
CIAPIN1ENSG00000005194.101128.67690878.694300.361102.713502.04100HepG2DDX21
CIAPIN1ENSG00000005194.102446.821701535.714700.671907.918306.91070HepG2DDX3X
CIAPIN1ENSG00000005194.10773.64150944.82890-0.288402.433801.79190HepG2DKC1
CIAPIN1ENSG00000005194.10659.23360842.30990-0.353602.181601.58950HepG2DNAJC2
CIAPIN1ENSG00000005194.10889.487301268.19160-0.511704.191103.46950HepG2EIF2S1
CIAPIN1ENSG00000005194.10906.401201364.52330-0.590203.997903.17820HepG2EIF4B
CIAPIN1ENSG00000005194.101063.066501464.42830-0.462104.114603.13250HepG2EIF4G2
CIAPIN1ENSG00000005194.10642.91670833.91950-0.375302.694101.91780HepG2FUBP3
CIAPIN1ENSG00000005194.10616.40530468.898400.394502.167501.38030HepG2GEMIN5
CIAPIN1ENSG00000005194.10612.45000943.07010-0.622805.871104.36910HepG2GNB2L1
CIAPIN1ENSG00000005194.101069.697401301.71240-0.283203.066902.31460HepG2HNRNPF
CIAPIN1ENSG00000005194.10370.41390621.81200-0.747306.386805.47510HepG2HNRNPLL
CIAPIN1ENSG00000005194.102372.756701422.409300.738108.389607.34090HepG2MATR3
CIAPIN1ENSG00000005194.10805.29520551.162700.546902.599501.57790HepG2METAP2
CIAPIN1ENSG00000005194.10436.63980634.24990-0.538602.373201.48350HepG2MTPAP
CIAPIN1ENSG00000005194.101215.228101536.41360-0.338303.327502.49280HepG2NOL12
CIAPIN1ENSG00000005194.10373.84910551.38260-0.560603.559402.71100HepG2NSUN2
CIAPIN1ENSG00000005194.10914.618001296.66790-0.503604.088303.22200HepG2PABPC4
CIAPIN1ENSG00000005194.10639.24710845.66870-0.403702.434001.73820HepG2PPIL4
CIAPIN1ENSG00000005194.10969.739301509.52660-0.6384010.603109.49430HepG2QKI
CIAPIN1ENSG00000005194.102432.320201743.760400.480008.447007.65680HepG2RBM22
CIAPIN1ENSG00000005194.101047.918601369.96280-0.386603.740902.96480HepG2RBM25
CIAPIN1ENSG00000005194.101175.409401444.60420-0.297503.450302.77140HepG2RECQL
CIAPIN1ENSG00000005194.10729.67650512.460400.509704.325203.57340HepG2RPS19
CIAPIN1ENSG00000005194.101328.546701027.552500.370502.642901.85910HepG2RPS2
CIAPIN1ENSG00000005194.10529.56040937.31920-0.823708.040406.78770HepG2RRP9
CIAPIN1ENSG00000005194.10646.03420844.38570-0.386302.458101.84500HepG2SAFB2
CIAPIN1ENSG00000005194.101231.02620784.069700.650705.199104.25670HepG2SF3A3
CIAPIN1ENSG00000005194.101004.926601406.45760-0.485008.475007.35190HepG2SLBP
CIAPIN1ENSG00000005194.102562.098001969.480900.379407.355706.64570HepG2SRFBP1
CIAPIN1ENSG00000005194.101972.894501514.631100.381205.998005.36770HepG2SRSF1
CIAPIN1ENSG00000005194.10890.977201232.20980-0.467807.430306.60490HepG2SRSF9
CIAPIN1ENSG00000005194.101064.754601361.33460-0.354503.847703.20540HepG2TAF15
CIAPIN1ENSG00000005194.10640.53270819.62030-0.355702.488001.53650HepG2TFIP11
CIAPIN1ENSG00000005194.101013.173701250.96050-0.304202.628301.81240HepG2TIA1
CIAPIN1ENSG00000005194.10750.59430929.51230-0.308401.794401.32030HepG2TRIM56
CIAPIN1ENSG00000005194.101082.30480753.912100.521504.056403.30130HepG2U2AF1
CIAPIN1ENSG00000005194.101304.69920671.332700.9585024.9474023.42300HepG2UTP3
CIAPIN1ENSG00000005194.10960.85370764.751700.329203.853103.23620HepG2ZNF622
CIAPIN1ENSG00000005194.10595.18980870.51490-0.548503.437801.98490HepG2ZRANB2
CIAPIN1ENSG00000005194.102435.224101991.460500.290102.978501.69030K562APOBEC3C
CIAPIN1ENSG00000005194.101557.196602242.26740-0.526006.285505.46030K562AQR
CIAPIN1ENSG00000005194.101044.539701387.65550-0.409805.189303.28210K562BCCIP
CIAPIN1ENSG00000005194.101576.749701230.780100.357304.825203.99900K562DDX47
CIAPIN1ENSG00000005194.101387.436001755.29860-0.339304.318003.44820K562EIF2S2
CIAPIN1ENSG00000005194.101163.73610931.676600.320802.892502.07950K562EIF3G
CIAPIN1ENSG00000005194.10408.08480618.96090-0.601004.302703.14030K562FTO
CIAPIN1ENSG00000005194.101582.08010900.133000.8135018.5367017.07890K562FXR1
CIAPIN1ENSG00000005194.10626.29640825.44400-0.398302.055001.45860K562G3BP2
CIAPIN1ENSG00000005194.10773.85530981.19720-0.342502.553101.97700K562HNRNPC
CIAPIN1ENSG00000005194.101367.057201112.227500.297502.360301.39260K562HNRNPL
CIAPIN1ENSG00000005194.101386.41920900.577000.622303.695202.60710K562HNRNPM
CIAPIN1ENSG00000005194.10468.60000660.47660-0.495203.268001.64570K562KHDRBS1
CIAPIN1ENSG00000005194.10395.72830585.08620-0.564102.144701.33460K562KRR1
CIAPIN1ENSG00000005194.101587.400401212.946600.388103.157402.25790K562MAGOH
CIAPIN1ENSG00000005194.101605.112201242.942900.368803.150702.26700K562PPIG
CIAPIN1ENSG00000005194.101766.211701178.474300.583608.586007.45810K562PTBP1
CIAPIN1ENSG00000005194.102160.670602566.30620-0.248202.289901.41510K562PUM2
CIAPIN1ENSG00000005194.101155.22700884.192600.385603.966603.27220K562RBM15
CIAPIN1ENSG00000005194.101436.995901155.328700.314702.735802.03220K562SRSF1
CIAPIN1ENSG00000005194.10731.98910961.03270-0.392803.974302.39880K562SSB
CIAPIN1ENSG00000005194.101481.68930984.371000.589908.629707.17730K562SYNCRIP
CIAPIN1ENSG00000005194.10886.656501219.06510-0.459303.647402.46400K562UCHL5
CIAPIN1ENSG00000005194.10803.183601022.12930-0.347802.714401.84600K562WDR3
CIAPIN1ENSG00000005194.10938.431701241.23850-0.403502.937501.68150K562XRN2
CIAPIN1ENSG00000005194.101617.511402526.16520-0.643209.847708.10370K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CIAPIN1 is not available on ENCORE database.





17 RBPs can affect the splicing of CIAPIN1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECIAPIN1ENSG00000005194.10chr16-5747468357474895574730935747320757481253574813310.175000.002260.04024includedK562SRSF1
SECIAPIN1ENSG00000005194.10chr16-574650625746517857464169574642515746639857466472-0.190000.000040.00258excludedK562AKAP8L
SECIAPIN1ENSG00000005194.10chr16-574663985746651957465062574651785746795557468124-0.082000.001630.01842excludedK562AQR
SECIAPIN1ENSG00000005194.10chr16-574747615747487157473093574732075748125357481289-0.239000.000010.00250excludedK562SUPV3L1
SECIAPIN1ENSG00000005194.10chr16-574650625746517857464169574642515746639857466472-0.263000.000000.00000excludedK562PUS1
SECIAPIN1ENSG00000005194.10chr16-574650625746517857464169574642515746639857466472-0.127000.004930.08047excludedK562U2AF1
SECIAPIN1ENSG00000005194.10chr16-574650625746517857464169574642515746639857466472-0.094000.000660.02748excludedK562HNRNPU
SECIAPIN1ENSG00000005194.10chr16-574650625746517857464169574642515746639857466472-0.132000.001840.04339excludedK562RBM15
SECIAPIN1ENSG00000005194.10chr16-574650625746517857464169574642515746639857466472-0.221000.000000.00014excludedK562AGGF1
A3SSCIAPIN1ENSG00000005194.10chr16-5746416957464371574641695746425157465062574651780.131000.000000.00000longerK562AQR
MXECIAPIN1ENSG00000005194.10chr16-57465062574651785746639857466472574641695746425157467955574681240.159000.000040.009861includedK562LARP4
MXECIAPIN1ENSG00000005194.10chr16-57465062574651785746639857466472574641695746425157467955574681240.098000.009030.082081includedK562DROSHA
MXECIAPIN1ENSG00000005194.10chr16-57465062574651785746639857466472574641695746425157467955574681240.128000.005240.066271includedK562U2AF1
MXECIAPIN1ENSG00000005194.10chr16-57466398574664725746795557468037574650625746517857474864574748950.068000.004050.089341includedK562XRN2
MXECIAPIN1ENSG00000005194.10chr16-57465062574651785746639857466472574641695746425157467955574681240.106000.015560.076841includedHepG2U2AF2
MXECIAPIN1ENSG00000005194.10chr16-57465062574651785746639857466472574641695746425157467955574681240.154000.000100.007521includedK562SBDS
MXECIAPIN1ENSG00000005194.10chr16-57465062574651785746639857466472574641695746425157467955574681240.250000.000000.000331includedK562CPSF6
MXECIAPIN1ENSG00000005194.10chr16-57466398574664725746795557468037574650625746517857474864574748950.059000.002870.050501includedK562PRPF8
MXECIAPIN1ENSG00000005194.10chr16-57465062574651785746639857466472574641695746425157467955574681240.119000.002310.039731includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CIAPIN1 is not avaliable on ENCORE database.