KHDRBS1

General Information

Gene Name       : KHDRBS1
Gene ID             : ENSG00000121774.17
Essential Gene : No

Functions

Localization(RBPImage: KHDRBS1)

Domains (AlphaFold: KHDRBS1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KHDRBS1ENSG00000121774.17107.14110.73108.94ENCSR000AEF
HepG2KHDRBS1ENSG00000121774.1769.1090.3579.72ENCSR985KAT
K562KHDRBS1ENSG00000121774.17144.09136.22140.16ENCSR000AEO

Assays

3 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 353ENCSR628IDKKHDRBS1K562ReleasedENCAB974QUZENCSR197NFH  
knockdown followed by RNA-seq KHDRBS1-BGKLV24-K562ENCSR023HWIKHDRBS1K562ReleasedENCSR667PLJ   shRNAKD% = 53.1,55.1
knockdown followed by RNA-seq KHDRBS1-BGHLV22-HepG2ENCSR784FTXKHDRBS1HepG2ReleasedENCSR279HMU   shRNAKD% = 62.0,58.9






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
KHDRBS1353K562ENCSR628IDKENCSR197NFHENCAB974QUZA302-110A1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
KHDRBS1ENCAB974QUZA302-110A1Released, ENCODE3BGHLV22-31, Released, ENCODE3BGKLV24-39, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
KHDRBS1K562shRNAENCSR023HWIENCSR667PLJKHDRBS1_BGKLV24_39_17620,KHDRBS1_BGKLV24_40_17621non-target_BGKLV24_1_17594,non-target_BGKLV24_2_1759553.1,55.1ReleasedENCODE3
KHDRBS1HepG2shRNAENCSR784FTXENCSR279HMUKHDRBS1-BGHLV22-31,KHDRBS1-BGHLV22-32non-target-BGHLV22-1_17746,non-target-BGHLV22-2_1774762.0,58.9ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    KHDRBS1: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Cytoplasm
  • Cytoskeleton
  • Microtubule
  • Mitotic-Apparatus (Spindle; Centrosomes)












  • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    KHDRBS1Product_ID: A302-110A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: KHDRBS1-human
    KHDRBS1_Secondary_Western.png<br>Caption: Western blot following shRNA against KHDRBS1 in K562 and HepG2 whole cell lysate using KHDRBS1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against KHDRBS1. Lanes 5-8 follow the same pattern, but in HepG2. KHDRBS1 protein appears as the green band, Tubulin serves as a control and appears in red.
    k562_bethyl_A302-110A_1_SAM68.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using KHDRBS1/SAM68 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-SAM68 antibody (lanes under 'SAM68').
    KHDRBS1_Secondary_Western.png<br>Caption: Western blot following shRNA against KHDRBS1 in K562 and HepG2 whole cell lysate using KHDRBS1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against KHDRBS1. Lanes 5-8 follow the same pattern, but in HepG2. KHDRBS1 protein appears as the green band, Tubulin serves as a control and appears in red.








    RNA Targets

    • KHDRBS1 protein binds to 1,225 RNA regions.  





    Proteins bound to RNA

    • KHDRBS1 RNA is bound by 41 proteins.  






    KHDRBS1 protein has 1,225 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 1,225 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    KHDRBS1chr15221910252219162+4.010474.02219K562OSBPL9intron-Distal
    KHDRBS1chr33730347437303552+3.141633.22514K562GOLGA4intron-Distal
    KHDRBS1chrX135956675135956703-4.4362710.58851K562RBMX3'-UTR,intron-Distal
    KHDRBS1chr3176867228176867321-3.013015.72269K562TBL1XR1intron-Distal
    KHDRBS1chr116917991569180012+4.457885.98361K562MYEOVintron-Distal
    KHDRBS1chr1155449589155449650-4.194254.45640K562ASH1LCDS,intron-Distal
    KHDRBS1chr8106346245106346335+3.265503.42334K562ZFPM2, RP11-127H5.1intron-Distal
    KHDRBS1chr19366310693663209+3.789953.69885K562CCDC18intron-Distal
    KHDRBS1chr7119544392119544439-3.963918.32075K562RP11-328J2.1intron-Distal
    KHDRBS1chr222215749922157558-3.026926.69458K562MAPK1intron-Distal
    KHDRBS1chr8130368209130368290-3.575115.87403K562CCDC26intron-Distal
    KHDRBS1chr3152041129152041184+3.347956.85959K562MBNL1intron-Distal
    KHDRBS1chr47411894074119016-3.322713.51693K562ANKRD17intron-Distal
    KHDRBS1chr89386840493868463-4.377665.15185K562RP11-100L22.2intron-Distal
    KHDRBS1chr119346734493467372-3.675715.49252K562TAF1Dintron-Distal
    KHDRBS1chr89126406291264079+3.603975.25672K562LINC00534intron-Distal
    KHDRBS1chr1246333634246333708-3.061743.51693K562SMYD3intron-Distal
    KHDRBS1chr3195804120195804149-3.981177.11970K562TFRCintron-Distal
    KHDRBS1chr1154687395468806-3.497476.44180K562AC104389.28, HBG2, HBE1intron-Distal
    KHDRBS1chr5154157414154157474+3.136243.90716K562LARP1intron-Distal
    KHDRBS1chr366222066622258+4.2042718.21255K562AC069277.2intron-Distal
    KHDRBS1chr7102026657102026713+3.049643.42334K562PRKRIP1intron-Distal
    KHDRBS1chr1241792582241792655-3.617054.64200K562OPN3, CHML3'-UTR,intron-Distal
    KHDRBS1chr1224613183224613248-4.215575.09407K562WDR26intron-Distal
    KHDRBS1chr6148065418148065471+3.226393.51693K562RP11-307P5.1intron-Distal
    KHDRBS1chr15121794651218004-3.782633.37923K562FAF1intron-Distal
    KHDRBS1chr211277331127739+3.802953.08967K562SNTG2intron-Distal
    KHDRBS1chr6148066058148066115+3.970183.49896K562RP11-307P5.1intron-Distal
    KHDRBS1chr13685002836850084-4.434113.78322K562STK40intron-Distal
    KHDRBS1chr7120805212120805256+3.352724.43137K562CPED1intron-Distal
    KHDRBS1chr21792866917928727-3.061355.10412K562SMC6intron-Distal
    KHDRBS1chr2175006548175006654-3.127164.48052K562OLA13'-UTR,CDS,intron-Distal,intron-Proximal
    KHDRBS1chr8130573839130573884-3.865955.89340K562CCDC26intron-Distal
    KHDRBS1chr221944795619448007-3.802953.37923K562UFD1Lintron-Distal
    KHDRBS1chr629664622966533-3.993094.02219K562SERPINB6intron-Distal
    KHDRBS1chr51274264012742745+3.062243.70419K562CT49intron-Distal
    KHDRBS1chr206154524861545351-4.391725.09407K562DIDO1intron-Distal
    KHDRBS1chr124634621046346290-4.164964.32294K562SCAF11intron-Distal
    KHDRBS1chr2145185553145185602-3.646986.09250K562ZEB2intron-Distal,intron-Proximal
    KHDRBS1chr89132644391326530+3.172204.27527K562LINC00534intron-Distal
    KHDRBS1chr15228121752281288-3.086044.67421K562NRD1intron-Distal
    KHDRBS1chr212359191823591979+3.047214.27580K562AP000705.7intron-Distal
    KHDRBS1chr71242765812427710-3.315724.23187K562VWDEintron-Distal
    KHDRBS1chr9134140394134140502-3.740183.37923K562FAM78Aintron-Distal
    KHDRBS1chr224818614948186225+4.151415.09407K562RP11-191L9.4intron-Distal
    KHDRBS1chr118699122086991351+3.791413.49896K562TMEM135intron-Distal
    KHDRBS1chr1167986476167986570+3.653175.49252K562DCAF6intron-Distal
    KHDRBS1chr61785414417854275-3.595433.08967K562KIF13Aintron-Distal
    KHDRBS1chr212360413023604212+3.483683.82074K562AP000705.7intron-Distal
    KHDRBS1chr23745585737455983-4.883456.81978K562CEBPZCDS,intron-Distal
    KHDRBS1chr77721315677213229+3.876373.49896K562PTPN12intron-Distal
    KHDRBS1chr1167516691167516789-3.060243.81669K562CREG1intron-Distal
    KHDRBS1chr1138970093897094+3.568213.08967K562STIM1intron-Distal
    KHDRBS1chr7119488687119488712-4.188414.73693K562RP11-328J2.1intron-Distal
    KHDRBS1chr47704504077045149-3.087335.48998K562NUP54intron-Distal
    KHDRBS1chr51038427210384361+4.4541111.79444K562MARCH6intron-Distal
    KHDRBS1chr1235594158235594258+3.858043.91018K562TBCEintron-Distal,intron-Proximal
    KHDRBS1chr7119407139119407191-3.539925.85304K562RP11-328J2.1intron-Distal
    KHDRBS1chr4144939113144939166-3.399274.88138K562GYPBintron-Distal
    KHDRBS1chr2171946632171946689-3.811493.82060K562TLK1intron-Distal
    KHDRBS1chr127459683074596916-3.901153.69885K562RP11-81H3.2intron-Distal
    KHDRBS1chr1100894796100894894+3.943593.87596K562CDC14Aintron-Distal
    KHDRBS1chr176809794568097989-4.082433.39089K562AC002539.1intron-Distal
    KHDRBS1chr1154416295441710-3.576098.55376K562AC104389.28, HBG2, HBE1intron-Distal
    KHDRBS1chr9100269184100269317+4.829996.14290K562TMOD1intron-Distal
    KHDRBS1chr122339294723393045-4.249494.66738K562RP11-153K16.2intron-Distal
    KHDRBS1chr153731985037319978-4.000743.91018K562MEIS2intron-Distal
    KHDRBS1chr7153105351153105450-3.6735212.71010K562AC073236.3intron-Distal
    KHDRBS1chr15253330752533390+3.896133.78322K562BTF3L4intron-Distal
    KHDRBS1chr176804229768042351-4.353385.56749K562AC002539.1intron-Distal
    KHDRBS1chr143295426132954326+3.334804.30020K562AKAP6intron-Distal
    KHDRBS1chr15224405652244117+3.646983.06411K562OSBPL9intron-Distal
    KHDRBS1chr31287851312878629-3.110126.07272K562RPL32intron-Distal
    KHDRBS1chr1054785525478680+3.646983.08967K562NET1intron-Distal
    KHDRBS1chr12208147322081516-4.647426.79920K562USP48intron-Distal
    KHDRBS1chr158200791082008026-3.807943.60701K562RP11-499F3.2intron-Distal
    KHDRBS1chr629653412965438-3.282634.43137K562SERPINB6intron-Distal
    KHDRBS1chr221935990419359967-3.033014.72062K562HIRA, C22orf39intron-Distal
    KHDRBS1chr221935885719358912-4.037333.49896K562C22orf39, HIRAintron-Distal
    KHDRBS1chr171594861115948809-4.206634.93143K562NCOR1intron-Distal
    KHDRBS1chr366222586622281+4.5007412.64118K562AC069277.2intron-Distal
    KHDRBS1chr7119405362119405401-3.365956.44180K562RP11-328J2.1intron-Distal
    KHDRBS1chr203109169631091910-4.135344.45640K562C20orf112intron-Distal
    KHDRBS1chr45649607556496091-3.872483.29026K562NMUintron-Distal
    KHDRBS1chr211586019915860267-3.529544.69565K562SAMSN1intron-Distal
    KHDRBS1chr55328077753280827-4.215574.28339K562ARL15intron-Distal
    KHDRBS1chr93715663137156709+3.5898010.89715K562ZCCHC7intron-Distal
    KHDRBS1chr62710911327109204-4.632854.43126K562HIST1H2BKintron-Distal
    KHDRBS1chr174419221644192334-3.767753.46942K562KANSL1intron-Distal
    KHDRBS1chr212361864723618706+3.121663.20717K562AP000705.7intron-Distal
    KHDRBS1chr118568224985682315-3.591845.27813K562PICALMintron-Distal
    KHDRBS1chr103322350933223769-4.206634.66738K562ITGB1intron-Distal
    KHDRBS1chr78678737986787444+3.963914.10879K562DMTF1intron-Distal
    KHDRBS1chr8130518762130518813-4.319925.73269K562CCDC26intron-Distal
    KHDRBS1chr5139857640139857729+4.269633.87596K562ANKHD1, ANKHD1-EIF4EBP3intron-Distal
    KHDRBS1chr7104626762104626852-3.008564.72062K562LINC01004intron-Distal
    KHDRBS1chr629697782969933-3.184203.70419K562SERPINB6intron-Distal
    KHDRBS1chr8103339709103339790-3.982004.28339K562UBR5intron-Distal
    KHDRBS1chr188268978826958-4.711317.46541K562REREintron-Distal
    KHDRBS1chr395031929503288+4.952088.48155K562SETD5intron-Distal




    41 proteins are bound to KHDRBS1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr13250934632509407+3'-UTR,intron-Distal4.3180911.98121HepG2SUB1
    chr13250851332508527+3'-UTR,intron-Distal5.1607840.08301K562CPEB4
    chr13250923032509318+3'-UTR,intron-Distal3.3928526.85322K562PABPC4
    chr13250931332509381+3'-UTR,intron-Distal4.4149186.55043K562PUM2
    chr13250849432508541+3'-UTR,intron-Distal5.5564312.48455K562TIA1
    chr13250852732508581+3'-UTR,intron-Distal4.6770440.33300K562CPEB4
    chr13250899432509063+3'-UTR,intron-Distal3.4862320.03301HepG2SUB1
    chr13250845932508494+3'-UTR,intron-Distal4.9033816.57635K562TIA1
    chr13250837532508423+3'-UTR,intron-Distal,intron-Proximal3.8377515.29957K562TIA1
    chr13250847032508527+3'-UTR,intron-Distal3.446923.67652K562APOBEC3C
    chr13250855832508585+3'-UTR,intron-Distal4.521104.97297K562TIA1
    chr13250853932508602+3'-UTR,intron-Distal4.4188375.15024K562PABPC4
    chr13250927932509313+3'-UTR,intron-Distal3.7993324.27769K562PUM2
    chr13250845132508536+3'-UTR,intron-Distal4.1852521.56620HepG2FUBP3
    chr13250825632508324+3'-UTR,intron-Proximal5.4640130.41010HepG2SUB1
    chr13250828732508337+3'-UTR,intron-Proximal3.354374.41952K562IGF2BP1
    chr13250846932508513+3'-UTR,intron-Distal3.8009416.71940K562CPEB4
    chr13250862232508684+3'-UTR,intron-Distal4.2313229.88589HepG2SUB1
    chr13247948832479556+5'-UTR5.7638114.02395K562SERBP1
    chr13247947332479566+5'-UTR3.032709.69943K562DDX3X
    chr13249595532496022+CDS3.042329.64262HepG2BCLAF1
    chr13250347532503550+CDS3.148486.10740K562SND1
    chr13250258032502645+CDS,intron-Proximal4.008488.85114K562RPS3
    chr13247997732479995+CDS,intron-Proximal4.450888.29266K562AQR
    chr13249878832498816+CDS,intron-Proximal3.777484.22242HepG2G3BP1
    chr13249890732498975+CDS,intron-Proximal3.478618.82495K562EFTUD2
    chr13250419932504211+CDS4.6160425.89965K562LIN28B
    chr13250420032504256+CDS,intron-Proximal4.1916810.26986HepG2PRPF8
    chr13250254632502638+CDS3.265727.01051K562PUM1
    chr13250415932504199+CDS3.478939.61407K562LIN28B
    chr13250512632505138+CDS4.645734.36355HepG2LIN28B
    chr13250251932502643+CDS3.1882510.12792HepG2GRWD1
    chr13249891632498933+CDS3.314974.37145K562GRWD1
    chr13250513332505174+CDS3.343326.15187K562ZNF800
    chr13250515532505175+CDS,intron-Proximal3.130934.39623HepG2PPIG
    chr13249718132497241+CDS,intron-Distal3.180236.18987HepG2GRWD1
    chr13250513032505175+CDS,intron-Proximal3.356354.40248K562PUM1
    chr13250514132505174+CDS6.9451674.08545K562LIN28B
    chr13250343532503476+CDS,intron-Proximal4.927836.85036HepG2RPS3
    chr13250348332503536+CDS3.357615.73981HepG2GRWD1
    chr13250513832505169+CDS5.584924.60263HepG2LIN28B
    chr13250251732502558+CDS4.951148.76639K562LIN28B
    chr13250343332503478+CDS,intron-Proximal4.475957.70120K562RPS3
    chr13250421932504236+CDS,intron-Proximal4.3193610.81562K562AQR
    chr13250415232504169+CDS,intron-Proximal3.282483.49777K562ZNF800
    chr13250358732503635+CDS3.132704.38893K562ZNF800
    chr13249596532496024+CDS,intron-Proximal3.276325.27398HepG2G3BP1
    chr13249596032496015+CDS3.131326.97506K562LIN28B
    chr13249879032498837+CDS3.679766.58996HepG2GRWD1
    chr13250247332502554+CDS,intron-Proximal3.7033715.99542K562BUD13
    chr13249882132498874+CDS4.201465.48759K562ZNF800
    chr13250257132502644+CDS4.7913214.38255HepG2RPS3
    chr13250507232505124+CDS,intron-Proximal3.476997.98670K562SF3B4
    chr13250348332503540+CDS4.211866.25801HepG2G3BP1
    chr13249712432497140+CDS,intron-Distal,intron-Proximal3.524978.79436K562YBX3
    chr13249893132498974+CDS,intron-Proximal4.197374.49024K562AQR
    chr13250814432508170+CDS3.701417.65019K562LIN28B
    chr13250511332505125+CDS,intron-Proximal6.0717740.08460K562LIN28B
    chr13250512932505239+CDS,intron-Proximal5.1137615.51998HepG2PRPF8
    chr13250512532505141+CDS7.1532788.19758K562LIN28B
    chr13247979532479879+CDS3.8341812.92533HepG2RPS3
    chr13250812632508144+CDS,intron-Proximal4.0286611.28365K562LIN28B
    chr13247987632479980+CDS,intron-Proximal3.600117.45446HepG2G3BP1
    chr13249886632498918+CDS4.7712913.02133K562RPS3
    chr13249881632498930+CDS3.269549.56470HepG2G3BP1
    chr13249891132498987+CDS,intron-Proximal3.8521613.12426K562PRPF8
    chr13247982132479909+CDS3.8302816.98780K562RPS3
    chr13250344232503463+CDS4.331374.01763HepG2GRWD1
    chr13250258132502640+CDS3.539734.70379HepG2HLTF
    chr13249596932496018+CDS3.321795.63601K562ZNF800
    chr13249715232497209+CDS,intron-Distal3.311349.17413K562ZNF800
    chr13250255132502643+CDS3.035475.43170HepG2G3BP1
    chr13250341732503474+CDS,intron-Proximal4.052628.31368K562AQR
    chr13249712432497175+CDS,intron-Distal,intron-Proximal3.095646.40070HepG2G3BP1
    chr13249873932498834+CDS,intron-Proximal4.5019733.06084K562SF3B4
    chr13249892232498974+CDS,intron-Proximal3.538159.27256K562BUD13
    chr13250342932503480+CDS,intron-Proximal3.9743110.97171HepG2BUD13
    chr13250506932505131+CDS,intron-Proximal4.305048.03271HepG2SF3A3
    chr13250416932504217+CDS3.073045.76475K562ZNF800
    chr13250506332505175+CDS,intron-Proximal3.276764.23709HepG2AQR
    chr13247989332479935+CDS3.376949.29824K562YBX3
    chr13249892032498929+CDS3.080313.39306HepG2GRWD1
    chr13247967632479784+CDS4.2913223.33437HepG2RPS3
    chr13249593432495960+CDS3.837139.36842K562LIN28B
    chr13247997032480020+CDS,intron-Proximal3.839615.43815HepG2PRPF8
    chr13250509332505129+CDS,intron-Proximal3.121406.62672K562AQR
    chr13249884632498916+CDS3.7555113.48557K562GRWD1
    chr13250257832502640+CDS4.326225.75613K562ZNF800
    chr13250812832508204+CDS3.2509512.18137K562DDX6
    chr13250358632503627+CDS4.336917.16955K562UCHL5
    chr13250245132502544+CDS,intron-Proximal3.7204814.18436K562SF3B4
    chr13249882832498912+CDS3.047863.04625HepG2UCHL5
    chr13249884132498932+CDS3.2028912.53083HepG2BCLAF1
    chr13249884132498892+CDS3.254703.41934K562NOLC1
    chr13250421132504221+CDS,intron-Proximal5.4833825.56443K562LIN28B
    chr13249127632491384+intron-Distal4.5666320.19078K562PCBP1
    chr13248862132488772+intron-Distal3.330003.35103HepG2QKI
    chr13248992432489971+intron-Distal3.375674.14989HepG2ILF3
    chr13250403032504095+intron-Distal,intron-Proximal4.328093.83958HepG2QKI
    chr13249724832497285+intron-Distal,intron-Proximal4.9116415.57922K562AQR
    chr13249131332491405+intron-Distal6.3816413.60442HepG2DDX59
    chr13250271432502780+intron-Distal,intron-Proximal4.234657.94395K562PRPF8
    chr13248867932488733+intron-Distal3.259063.59765K562ILF3
    chr13249126632491402+intron-Distal4.497563.44758HepG2CSTF2T
    chr13249126632491398+intron-Distal5.2920210.88287HepG2HNRNPK
    chr13248034132480391+intron-Distal4.688685.42395HepG2HNRNPM
    chr13249130032491405+intron-Distal6.3426783.12132HepG2PCBP2
    chr13249131232491419+intron-Distal3.9267621.55757K562ILF3
    chr13249048732490532+intron-Distal3.711883.24590HepG2ILF3
    chr13249155932491596+intron-Distal3.282713.59765K562ILF3
    chr13249132832491404+intron-Distal4.479488.18682HepG2ILF3
    chr13250399832504069+intron-Distal,intron-Proximal3.372958.44889K562KHSRP
    chr13248579132485892+intron-Distal3.518753.59765K562ILF3
    chr13250087732500956+intron-Distal4.397453.07980HepG2HNRNPM
    chr13248127432481437+intron-Distal3.123976.55259K562KHSRP
    chr13248004032480088+intron-Distal,intron-Proximal5.1999214.66604HepG2RBM22
    chr13249125932491300+intron-Distal3.722228.84115HepG2PCBP2
    chr13249575132495814+intron-Distal,intron-Proximal3.954684.10688K562KHSRP
    chr13250430432504365+intron-Distal,intron-Proximal3.261549.38447K562EFTUD2
    chr13249132132491390+intron-Distal3.009194.64577K562HNRNPK
    chr13249897332499049+intron-Distal,intron-Proximal3.240765.78064K562KHSRP
    chr13250083832500915+intron-Distal4.301164.28571K562HNRNPM
    chr13250426732504371+intron-Distal,intron-Proximal3.5336420.36796K562AQR
    chr13250411932504150+intron-Proximal4.626945.16342K562SF3B4
    chr13251091432510963+intron-Proximal4.8679114.26770K562SF3B4
    chr13251089332511014+intron-Proximal3.936246.70028K562SMNDC1
    chr13247999532480020+intron-Proximal6.0710410.48996K562AQR
    chr13250423632504267+intron-Proximal4.8395518.73357K562AQR
    chr13249898732499035+intron-Proximal4.969396.08021K562PRPF8
    chr13250363732503682+intron-Proximal4.667368.01338K562AQR
    chr13250503132505063+intron-Proximal3.823163.25538K562KHSRP
    chr13250265432502690+intron-Proximal3.401114.63311K562AQR
    chr13249602432496068+intron-Proximal3.384435.32296K562PRPF8
    chr13251088432510914+intron-Proximal5.300559.04180K562SF3B4
    chr13250424632504304+intron-Proximal3.758338.80518K562EFTUD2
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein KHDRBS1 and its RNA.



    Diffrential Expression

    • 2,612 differentially expressed genes after Knockdown/Knockout KHDRBS1 protein.  





    • 114 RBPs can affect the levels of KHDRBS1.  







    2,612 differentially expressed genes after Knockdown/Knockout KHDRBS1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 2,612 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    SEMA3FENSG00000001617.7593.56520384.217900.627402.906201.67930HepG2KHDRBS1
    CYP51A1ENSG00000001630.114153.730102994.236700.472103.636402.23660HepG2KHDRBS1
    BADENSG00000002330.9101.5188037.751701.427005.357103.62630HepG2KHDRBS1
    LAP3ENSG00000002549.81927.117002611.46590-0.438403.087101.81270HepG2KHDRBS1
    SLC7A2ENSG00000003989.127631.8556011239.36470-0.558505.141303.44780HepG2KHDRBS1
    CAMKK1ENSG00000004660.1079.4159040.541700.969902.556501.42140HepG2KHDRBS1
    ARHGAP33ENSG00000004777.14171.3873062.812001.448008.118905.97590HepG2KHDRBS1
    PDK4ENSG00000004799.70.8639013.88760-4.006703.286301.96020HepG2KHDRBS1
    SPPL2BENSG00000005206.12364.31950222.163900.713502.546601.41510HepG2KHDRBS1
    ITGALENSG00000005844.1363.6381027.762601.196602.562101.42580HepG2KHDRBS1
    ASB4ENSG00000005981.847.0940094.20990-1.000303.054501.78770HepG2KHDRBS1
    TMEM132AENSG00000006118.10741.22270432.594400.776803.706102.29590HepG2KHDRBS1
    SPATA20ENSG00000006282.151075.67640636.495600.756906.737604.77410HepG2KHDRBS1
    MAP3K9ENSG00000006432.11536.19550866.93800-0.693205.462103.71080HepG2KHDRBS1
    JHDM1DENSG00000006459.62421.348703694.14140-0.609405.628903.84610HepG2KHDRBS1
    CCDC124ENSG00000007080.6218.90070110.950200.980305.152803.45660HepG2KHDRBS1
    TRAPPC6AENSG00000007255.6253.55900146.547600.790904.006302.52050HepG2KHDRBS1
    PAX6ENSG00000007372.1628.8441080.51040-1.480903.721002.30410HepG2KHDRBS1
    TSR3ENSG00000007520.3213.78640138.738000.623702.525101.40000HepG2KHDRBS1
    PIGQENSG00000007541.10158.3431067.794001.223705.932904.08830HepG2KHDRBS1
    JARID2ENSG00000008083.9372.15790619.01530-0.734105.399203.65930HepG2KHDRBS1
    IL32ENSG00000008517.123520.559202726.203500.368802.403001.30830HepG2KHDRBS1
    PKD1ENSG00000008710.131249.87950528.489701.241705.735903.92720HepG2KHDRBS1
    MLXIPLENSG00000009950.111725.466701060.218100.702506.588004.65420HepG2KHDRBS1
    UQCRC1ENSG00000010256.63118.765904367.41320-0.485802.900701.67510HepG2KHDRBS1
    CD9ENSG00000010278.7397.26870605.29070-0.607503.865402.41720HepG2KHDRBS1
    IFFO1ENSG00000010295.15378.51760235.750500.683003.888102.43360HepG2KHDRBS1
    STAB1ENSG00000010327.625.416805.019602.340003.242401.92950HepG2KHDRBS1
    HIVEP2ENSG00000010818.41744.996902526.96320-0.534204.302102.75860HepG2KHDRBS1
    WIZENSG00000011451.13415.01730212.534700.965407.183205.18040HepG2KHDRBS1
    RABGAP1ENSG00000011454.12809.953001093.88800-0.433602.658901.49500HepG2KHDRBS1
    BRCA1ENSG00000012048.15302.78450145.824101.054007.017805.02970HepG2KHDRBS1
    KDM5DENSG00000012817.111434.320201942.72250-0.437702.962701.72250HepG2KHDRBS1
    GPRC5AENSG00000013588.548.93540209.47250-2.097803.548002.16740HepG2KHDRBS1
    MTMR11ENSG00000014914.1571.76030189.56590-1.401408.415106.21710HepG2KHDRBS1
    DPEP1ENSG00000015413.5244.1472063.933101.9330015.8541012.86600HepG2KHDRBS1
    MATR3ENSG00000015479.136138.365108077.45130-0.396002.816001.61330HepG2KHDRBS1
    NPC1L1ENSG00000015520.10824.82900437.538800.914606.810204.84160HepG2KHDRBS1
    XYLT2ENSG00000015532.5736.84630453.417600.700404.839203.20730HepG2KHDRBS1
    SRCIN1ENSG00000017373.11308.42210172.478200.838404.882303.24170HepG2KHDRBS1
    SLC38A5ENSG00000017483.10641.20470906.26700-0.499203.179601.88470HepG2KHDRBS1
    WWTR1ENSG00000018408.103019.876404180.35490-0.469103.587402.19730HepG2KHDRBS1
    ATP1A2ENSG00000018625.1050.600206.115603.048507.959905.84930HepG2KHDRBS1
    CYP24A1ENSG00000019186.5965.08620469.665001.0389011.272908.76190HepG2KHDRBS1
    CD74ENSG00000019582.101251.88460925.964300.435002.742701.55770HepG2KHDRBS1
    NCDNENSG00000020129.11186.57870118.634500.653202.479001.36810HepG2KHDRBS1
    SAMD4AENSG00000020577.92071.041303573.62260-0.787002.932701.69800HepG2KHDRBS1
    SERPINB1ENSG00000021355.81225.673201636.03190-0.416602.645601.48600HepG2KHDRBS1
    CPS1ENSG00000021826.10508.00080766.86440-0.594104.056102.56170HepG2KHDRBS1
    C8BENSG00000021852.8635.14130313.542201.018309.441207.08570HepG2KHDRBS1
    RNH1ENSG00000023191.12896.81000481.146500.898203.934202.46610HepG2KHDRBS1
    NDUFS1ENSG00000023228.92681.011703517.12710-0.391602.627301.47390HepG2KHDRBS1
    ABCC2ENSG00000023839.68970.5814011526.50220-0.361702.433101.33200HepG2KHDRBS1
    PHF20ENSG00000025293.11944.354801249.63840-0.404102.401101.30700HepG2KHDRBS1
    TYMPENSG00000025708.848.1282017.786201.436003.019301.76460HepG2KHDRBS1
    NCAPH2ENSG00000025770.14360.88580225.226000.680102.783901.59050HepG2KHDRBS1
    RTEL1-TNFRSF6BENSG00000026036.16229.40350103.391401.149703.349402.01130HepG2KHDRBS1
    RNASET2ENSG00000026297.115547.807808183.74800-0.560803.745402.32310HepG2KHDRBS1
    B4GALT7ENSG00000027847.9210.18870126.343800.734203.206901.90310HepG2KHDRBS1
    BCLAF1ENSG00000029363.112885.541004098.68790-0.506304.128202.62150HepG2KHDRBS1
    UBA6ENSG00000033178.81164.283401810.43000-0.636905.564003.79230HepG2KHDRBS1
    SLC4A7ENSG00000033867.121851.333402476.06980-0.419502.844201.63190HepG2KHDRBS1
    UHRF1ENSG00000034063.9243.32410118.287201.040505.772803.95670HepG2KHDRBS1
    SH3YL1ENSG00000035115.17849.340901131.36760-0.413702.464301.35740HepG2KHDRBS1
    TBC1D23ENSG00000036054.81021.506901391.61030-0.446102.909901.68240HepG2KHDRBS1
    USP2ENSG00000036672.11225.84680131.961600.775103.643502.24230HepG2KHDRBS1
    VCANENSG00000038427.111341.223303244.88510-1.274608.818906.54060HepG2KHDRBS1
    CDH1ENSG00000039068.141010.63520732.320500.464602.899401.67440HepG2KHDRBS1
    RAI14ENSG00000039560.9736.023301118.17850-0.603304.603103.01170HepG2KHDRBS1
    AIFM2ENSG00000042286.10337.24410486.38410-0.528302.841101.62930HepG2KHDRBS1
    PHKA2ENSG00000044446.73554.110705713.52380-0.684905.018703.34850HepG2KHDRBS1
    DSG2ENSG00000046604.84071.397305533.74670-0.442703.330801.99720HepG2KHDRBS1
    COL9A2ENSG00000049089.91764.19910970.479900.862107.249305.22940HepG2KHDRBS1
    KITLGENSG00000049130.9177.05960297.36240-0.748004.019702.53230HepG2KHDRBS1
    RFC2ENSG00000049541.6196.30900126.506900.633802.449601.34600HepG2KHDRBS1
    BCAR1ENSG00000050820.121386.93650709.576400.966803.051401.78690HepG2KHDRBS1
    RAD51ENSG00000051180.12124.2082062.686600.986403.619102.22390HepG2KHDRBS1
    POLQENSG00000051341.9236.83840121.487300.963005.273403.55540HepG2KHDRBS1
    PIK3CBENSG00000051382.41580.700602407.30030-0.606905.316703.59290HepG2KHDRBS1
    CYBAENSG00000051523.61013.23650485.902701.060108.025405.90750HepG2KHDRBS1
    PRSS8ENSG00000052344.11937.32350221.105502.0837036.5948032.52760HepG2KHDRBS1
    FSTL4ENSG00000053108.1283.4802043.193800.950502.586301.44410HepG2KHDRBS1
    OPN3ENSG00000054277.8322.47840606.83430-0.912107.744805.66430HepG2KHDRBS1
    SYNE2ENSG00000054654.11631.38930921.14640-0.544903.709502.29810HepG2KHDRBS1
    PUM2ENSG00000055917.112849.331304183.97090-0.554204.832303.20210HepG2KHDRBS1
    ITIH4ENSG00000055955.1165.0538028.921301.169402.891101.66730HepG2KHDRBS1
    USP13ENSG00000058056.41391.091902174.51170-0.644505.836404.00970HepG2KHDRBS1
    CROCCENSG00000058453.1268.5600026.691801.360902.575801.43640HepG2KHDRBS1
    ZC3H11AENSG00000058673.113831.172905066.10460-0.403102.831501.62250HepG2KHDRBS1
    FLYWCH1ENSG00000059122.12245.99480127.703100.945705.263503.54840HepG2KHDRBS1
    SLC2A3ENSG00000059804.113235.9870014961.51900-2.209007.797005.70440HepG2KHDRBS1
    OGFRENSG00000060491.121119.28960524.507201.093403.020201.76480HepG2KHDRBS1
    CREB3L3ENSG00000060566.9143.5144087.048500.721202.446301.34300HepG2KHDRBS1
    PTPRUENSG00000060656.151596.87280971.905700.716303.070301.79960HepG2KHDRBS1
    VMP1ENSG00000062716.65004.946707244.16090-0.533504.654303.05650HepG2KHDRBS1
    POLD1ENSG00000062822.8255.92380145.439100.815204.241702.71100HepG2KHDRBS1
    GPC1ENSG00000063660.4194.9564057.817501.7535011.774909.19200HepG2KHDRBS1
    NGFRENSG00000064300.468.02080165.20400-1.280206.626704.68490HepG2KHDRBS1
    RFXANKENSG00000064490.9285.48990194.560400.553102.428201.32850HepG2KHDRBS1
    TMEM161AENSG00000064545.10320.86400191.038100.748003.632402.23430HepG2KHDRBS1
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    114 RBPs can affect the gene expression of KHDRBS1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    KHDRBS1ENSG00000121774.132568.414302883.45290-0.166901.956701.42890HepG2ACO1
    KHDRBS1ENSG00000121774.132022.347102763.74760-0.450603.694102.50000HepG2AKAP8
    KHDRBS1ENSG00000121774.132929.367103714.62370-0.342602.718201.94000HepG2ASCC1
    KHDRBS1ENSG00000121774.133346.585705130.98630-0.6165019.8221018.29120HepG2AUH
    KHDRBS1ENSG00000121774.131953.354902679.09790-0.455803.418502.37780HepG2BCCIP
    KHDRBS1ENSG00000121774.131462.368902327.97960-0.670807.352205.96850HepG2BCLAF1
    KHDRBS1ENSG00000121774.132014.185403731.64990-0.8896018.3339016.99420HepG2BOP1
    KHDRBS1ENSG00000121774.132435.721903410.11550-0.485507.870506.66560HepG2CALR
    KHDRBS1ENSG00000121774.133460.498904491.46160-0.376202.418301.51300HepG2CCAR1
    KHDRBS1ENSG00000121774.132564.672703529.14910-0.460504.652803.66440HepG2CIRBP
    KHDRBS1ENSG00000121774.132535.080602882.84480-0.185502.560301.91600HepG2CKAP4
    KHDRBS1ENSG00000121774.131925.813702776.76910-0.527903.134502.31750HepG2CNOT7
    KHDRBS1ENSG00000121774.132736.691503425.81510-0.324002.731102.04890HepG2CPSF6
    KHDRBS1ENSG00000121774.133141.706604426.99740-0.4948017.9013016.31520HepG2DAZAP1
    KHDRBS1ENSG00000121774.132236.499602617.64770-0.227002.380901.31080HepG2DDX1
    KHDRBS1ENSG00000121774.131717.687002295.59750-0.418404.491303.64930HepG2DDX21
    KHDRBS1ENSG00000121774.132349.327204300.52840-0.8723013.8651012.57070HepG2DDX3X
    KHDRBS1ENSG00000121774.131775.695902634.08210-0.568905.108704.09780HepG2DDX55
    KHDRBS1ENSG00000121774.132616.988303246.33910-0.310902.571601.59060HepG2DDX5
    KHDRBS1ENSG00000121774.131887.454303694.25700-0.9688014.2763013.01300HepG2DDX6
    KHDRBS1ENSG00000121774.131944.760402475.62800-0.348203.314902.24620HepG2DHX30
    KHDRBS1ENSG00000121774.132020.986002566.77320-0.344904.891303.98000HepG2DNAJC21
    KHDRBS1ENSG00000121774.131965.374302544.01020-0.372308.185107.13760HepG2DNAJC2
    KHDRBS1ENSG00000121774.132013.966003551.36490-0.8183012.2757011.08410HepG2EIF2S1
    KHDRBS1ENSG00000121774.132545.830503924.66890-0.624406.498205.51820HepG2EIF4A3
    KHDRBS1ENSG00000121774.133778.024404367.11410-0.209002.445601.65070HepG2EIF4G1
    KHDRBS1ENSG00000121774.132991.430604183.48590-0.483906.024404.84530HepG2EIF4G2
    KHDRBS1ENSG00000121774.133952.702505891.07730-0.5757017.9289016.61920HepG2ETF1
    KHDRBS1ENSG00000121774.133075.407103886.66210-0.337802.401401.67940HepG2FIP1L1
    KHDRBS1ENSG00000121774.131838.197103431.77620-0.900704.661203.34910HepG2FTO
    KHDRBS1ENSG00000121774.132572.797802059.218800.321103.022802.20470HepG2FUBP3
    KHDRBS1ENSG00000121774.132398.216303673.32790-0.615106.760505.74070HepG2G3BP1
    KHDRBS1ENSG00000121774.131941.651502494.91060-0.361702.743701.73040HepG2GNB2L1
    KHDRBS1ENSG00000121774.132042.173803883.31090-0.9272014.5791013.22330HepG2GPKOW
    KHDRBS1ENSG00000121774.131718.358702591.36250-0.592708.717307.66510HepG2HNRNPA1
    KHDRBS1ENSG00000121774.133479.879004068.31870-0.225403.182702.18950HepG2HNRNPA2B1
    KHDRBS1ENSG00000121774.131965.788702882.37930-0.552207.549606.45020HepG2HNRNPC
    KHDRBS1ENSG00000121774.132650.127803223.36780-0.282504.507803.61780HepG2HNRNPF
    KHDRBS1ENSG00000121774.133546.366404032.79330-0.185403.313102.58080HepG2HNRNPL
    KHDRBS1ENSG00000121774.132479.798903705.92570-0.579607.267006.30220HepG2HNRNPLL
    KHDRBS1ENSG00000121774.132302.545202863.32510-0.314505.413604.58730HepG2HNRNPU
    KHDRBS1ENSG00000121774.132383.493103174.08070-0.413305.860404.84680HepG2IGF2BP1
    KHDRBS1ENSG00000121774.132263.404803733.85370-0.7222010.104608.90070HepG2IGF2BP2
    KHDRBS1ENSG00000121774.132134.601202924.79740-0.4544012.9853011.52790HepG2ILF2
    KHDRBS1ENSG00000121774.13636.784102644.77970-2.0543047.9784043.61010HepG2KHDRBS1
    KHDRBS1ENSG00000121774.132120.022702635.84910-0.314206.164904.66670HepG2KIF1C
    KHDRBS1ENSG00000121774.133675.673704741.22150-0.367302.443601.66660HepG2LARP4
    KHDRBS1ENSG00000121774.133256.984003961.22940-0.282401.913301.36250HepG2MAGOH
    KHDRBS1ENSG00000121774.132696.157603983.39660-0.563105.605904.73310HepG2MATR3
    KHDRBS1ENSG00000121774.132493.234103145.77690-0.335403.502302.59320HepG2MSI2
    KHDRBS1ENSG00000121774.132552.755603779.81920-0.566304.020802.84120HepG2MTPAP
    KHDRBS1ENSG00000121774.132476.987604077.22520-0.719009.282408.16250HepG2NCBP2
    KHDRBS1ENSG00000121774.133354.597304389.77720-0.388006.351605.19850HepG2NOL12
    KHDRBS1ENSG00000121774.132609.184103286.09720-0.332803.045102.26100HepG2NSUN2
    KHDRBS1ENSG00000121774.131848.367302537.62620-0.457202.209301.43160HepG2PABPC1
    KHDRBS1ENSG00000121774.132289.384903631.02250-0.665408.222106.99150HepG2PABPC4
    KHDRBS1ENSG00000121774.132581.459803221.21880-0.319403.771302.88150HepG2PRPF4
    KHDRBS1ENSG00000121774.131456.017702032.13520-0.481004.186403.21710HepG2PRPF8
    KHDRBS1ENSG00000121774.132909.168403495.86210-0.265003.680103.06870HepG2PTBP1
    KHDRBS1ENSG00000121774.132492.244404190.30070-0.7496015.5863014.32530HepG2PUF60
    KHDRBS1ENSG00000121774.133855.251904448.04170-0.206302.509101.93860HepG2PUM1
    KHDRBS1ENSG00000121774.132329.023802936.98660-0.334606.412405.54410HepG2PUS1
    KHDRBS1ENSG00000121774.132945.923703786.01840-0.362005.278104.45620HepG2QKI
    KHDRBS1ENSG00000121774.133390.788904923.84670-0.5382013.0970012.13730HepG2RBM22
    KHDRBS1ENSG00000121774.132593.703103436.08780-0.405805.102704.21300HepG2RBM25
    KHDRBS1ENSG00000121774.134194.292103623.556600.210902.934802.30170HepG2RECQL
    KHDRBS1ENSG00000121774.131724.151003472.60190-1.0101023.6587022.07210HepG2RPLP0
    KHDRBS1ENSG00000121774.131907.387902646.65230-0.472602.771101.82650HepG2RPS10
    KHDRBS1ENSG00000121774.131618.359202187.10940-0.434505.145804.33780HepG2RPS19
    KHDRBS1ENSG00000121774.131847.352902787.25090-0.593404.768503.71970HepG2RPS3A
    KHDRBS1ENSG00000121774.132162.482802549.93670-0.237803.462302.75570HepG2SAFB2
    KHDRBS1ENSG00000121774.131717.024502195.07910-0.354402.931301.96110HepG2SERBP1
    KHDRBS1ENSG00000121774.132878.180403668.06660-0.349903.500202.71550HepG2SF3B1
    KHDRBS1ENSG00000121774.133414.929204017.54230-0.234504.592503.72410HepG2SLBP
    KHDRBS1ENSG00000121774.132684.046702973.68930-0.147801.963101.40640HepG2SMN1
    KHDRBS1ENSG00000121774.132647.456704081.39160-0.624504.617103.59730HepG2SNRNP70
    KHDRBS1ENSG00000121774.134071.796105561.29680-0.4498013.7884012.89720HepG2SRFBP1
    KHDRBS1ENSG00000121774.133110.457704137.13470-0.411509.578008.50630HepG2SRSF5
    KHDRBS1ENSG00000121774.132467.683003166.90890-0.359906.942405.92000HepG2SRSF7
    KHDRBS1ENSG00000121774.132402.443303090.67680-0.363407.276806.45780HepG2SRSF9
    KHDRBS1ENSG00000121774.133673.969204828.51050-0.394209.565708.72430HepG2SSB
    KHDRBS1ENSG00000121774.134309.376204705.21330-0.126801.827101.30240HepG2SUCLG1
    KHDRBS1ENSG00000121774.132132.313702624.60350-0.299702.771201.82940HepG2SUPT6H
    KHDRBS1ENSG00000121774.131589.521102622.23270-0.722208.187907.12440HepG2SUPV3L1
    KHDRBS1ENSG00000121774.132195.764803612.44150-0.7183011.8506010.50960HepG2TARDBP
    KHDRBS1ENSG00000121774.131244.811801757.61780-0.497703.950502.78410HepG2TFIP11
    KHDRBS1ENSG00000121774.131523.716402782.37680-0.8687022.1544020.99140HepG2TIAL1
    KHDRBS1ENSG00000121774.131972.241202807.11890-0.5093012.1734011.11200HepG2TRIM56
    KHDRBS1ENSG00000121774.133351.667204093.50540-0.288503.161902.22270HepG2TUFM
    KHDRBS1ENSG00000121774.132418.090603324.88180-0.459404.873204.05230HepG2U2AF1
    KHDRBS1ENSG00000121774.132210.625703901.90620-0.819702.391501.48330HepG2U2AF2
    KHDRBS1ENSG00000121774.133113.849704332.75260-0.476604.835403.71070HepG2UBE2L3
    KHDRBS1ENSG00000121774.131067.473401549.06400-0.537204.999403.97280HepG2UCHL5
    KHDRBS1ENSG00000121774.132284.248202923.40570-0.355907.016705.98870HepG2UPF1
    KHDRBS1ENSG00000121774.132741.954203179.07670-0.213402.009501.42280HepG2ZC3H8
    KHDRBS1ENSG00000121774.132675.537403215.19100-0.265105.212704.52200HepG2ZNF622
    KHDRBS1ENSG00000121774.1310601.059407471.626900.5046017.0882015.80100K562AGGF1
    KHDRBS1ENSG00000121774.134628.239205996.25460-0.373605.047103.99150K562CPSF6
    KHDRBS1ENSG00000121774.137184.697808688.79360-0.274204.962904.12640K562DDX47
    KHDRBS1ENSG00000121774.139729.989208366.141600.217802.926902.02320K562DKC1
    KHDRBS1ENSG00000121774.133787.858604948.15850-0.385506.811805.57480K562EIF3G
    KHDRBS1ENSG00000121774.135251.047706648.39400-0.340403.523602.55690K562FIP1L1
    KHDRBS1ENSG00000121774.135029.471406100.88070-0.278602.319501.53450K562FMR1
    KHDRBS1ENSG00000121774.133951.052705170.97460-0.388203.499802.46330K562FTO
    KHDRBS1ENSG00000121774.134490.821605725.01620-0.350303.912302.97370K562GPKOW
    KHDRBS1ENSG00000121774.136850.417308694.84400-0.344002.109501.44370K562GRSF1
    KHDRBS1ENSG00000121774.133995.994005148.37090-0.365604.506703.76310K562HNRNPC
    KHDRBS1ENSG00000121774.13930.235002976.50800-1.6780046.1433042.09610K562KHDRBS1
    KHDRBS1ENSG00000121774.135540.853506674.56740-0.268602.613801.71850K562MATR3
    KHDRBS1ENSG00000121774.1311061.718209242.998600.259002.631501.74820K562MBNL1
    KHDRBS1ENSG00000121774.134461.866105588.22560-0.324703.571002.56970K562METAP2
    KHDRBS1ENSG00000121774.135842.603506613.79500-0.178902.688801.89090K562MTPAP
    KHDRBS1ENSG00000121774.136715.096407348.46470-0.130002.443101.73790K562NSUN2
    KHDRBS1ENSG00000121774.134903.981905950.89100-0.279202.650701.69310K562PCBP2
    KHDRBS1ENSG00000121774.134535.626006071.88720-0.420803.934002.94250K562PCBP3
    KHDRBS1ENSG00000121774.133489.926404657.22970-0.416306.215705.01950K562POLR2G
    KHDRBS1ENSG00000121774.133728.362704615.99340-0.308102.972602.03020K562PSIP1
    KHDRBS1ENSG00000121774.1312921.633007710.416600.7448014.3350013.14120K562PUS1
    KHDRBS1ENSG00000121774.139400.622607512.466300.323405.230104.43750K562RBM15
    KHDRBS1ENSG00000121774.135011.705906231.50540-0.314302.783701.94120K562RBM22
    KHDRBS1ENSG00000121774.134141.778404873.20810-0.234604.136102.21210K562RPS10
    KHDRBS1ENSG00000121774.133284.539104321.21960-0.395703.099002.23280K562RPS19
    KHDRBS1ENSG00000121774.133687.410005198.99780-0.495605.773904.25850K562RPS3
    KHDRBS1ENSG00000121774.135609.684407251.14180-0.370307.357506.07630K562SF3A3
    KHDRBS1ENSG00000121774.136232.371107428.95870-0.253405.820804.52950K562SRPK2
    KHDRBS1ENSG00000121774.135112.265506369.40030-0.317203.779002.95790K562SRSF1
    KHDRBS1ENSG00000121774.135520.407304671.481500.240802.526801.74400K562SYNCRIP
    KHDRBS1ENSG00000121774.133846.756404932.64270-0.358704.952803.87940K562U2AF2
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    52 alternative splicing events after Knockdown/Knockout KHDRBS1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 52 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEFBLENSG00000105202.3chr19-4033125640331427403310534033115540336930403370540.052000.000020.02575includedK562KHDRBS1
    SEZNF207ENSG00000010244.12chr17+3069368330693776306923483069250630694790306949620.173000.000000.00041includedK562KHDRBS1
    SEDDX17ENSG00000100201.14chr22-3888522738885463388838833888412038888060388881200.070000.000090.08854includedK562KHDRBS1
    SEZFAND1ENSG00000104231.6chr8-8262948382629523826272218262734982630416826304590.387000.000020.03244includedK562KHDRBS1
    SEU2AF1ENSG00000160201.7chr21-4452147544521542445205624452062944524424445245120.134000.000010.01679includedK562KHDRBS1
    SEDKC1ENSG00000130826.11chrX+1539952711539953361539944901539946751539955301539956570.065000.000090.08854includedK562KHDRBS1
    SETXNL4AENSG00000141759.10chr18-7773759777737701777328747773385677748239777485930.133000.000020.02754includedK562KHDRBS1
    SEKIAA1191ENSG00000122203.10chr5-1757776151757777351757752521757753591757868131757869210.147000.000040.04762includedK562KHDRBS1
    SESBDSP1ENSG00000225648.1chr7+7230133072301393723000857230036272302181723023780.246000.000110.09900includedK562KHDRBS1
    SENUTM2A-AS1ENSG00000223482.3chr10-8909065289090853890863868908642989096542890966460.214000.000010.02306includedK562KHDRBS1
    SEHIST1H2ACENSG00000180573.8chr6+2612792526127989261244302612486126138281261393440.189000.000000.00000includedK562KHDRBS1
    SESMCHD1ENSG00000101596.10chr18+2799278279938127964042796519280252528050150.079000.000020.02368includedK562KHDRBS1
    SEUCHL5ENSG00000116750.9chr1-1929894361929895111929848881929855251929902261929903250.202000.000000.00258includedK562KHDRBS1
    SERPS24ENSG00000138326.14chr10+7979996179799983797969517979706279800372798004550.107000.000000.00035includedK562KHDRBS1
    SEATP5JENSG00000154723.8chr21-2710729927107534271019412710211227107625271079570.424000.000030.03629includedK562KHDRBS1
    SESNRNP70ENSG00000104852.10chr19+4960537049606844496046464960472849607890496079920.052000.000000.00685includedK562KHDRBS1
    SEABHD14A-ACY1ENSG00000114786.11chr3+520192225201928752018062520181745201937652019481-0.096000.000010.01376excludedK562KHDRBS1
    SESENP6ENSG00000112701.13chr6+763324667633257476331247763313417633361576333676-0.362000.000090.08854excludedK562KHDRBS1
    SEPLD3ENSG00000105223.14chr19+408714594087183740854596408546754087232540872417-0.283000.000000.00071excludedK562KHDRBS1
    SETBC1D23ENSG00000036054.8chr3+100030676100030721100029246100029386100034942100035031-0.314000.000000.00258excludedK562KHDRBS1
    SEMMABENSG00000139428.7chr12-109999047109999134109998844109998909109999224109999322-0.252000.000090.08854excludedK562KHDRBS1
    SEMETTL13ENSG00000010165.15chr1+171759591171759756171756874171757070171761156171761375-0.190000.000030.04037excludedK562KHDRBS1
    SEGNASENSG00000087460.19chr20+574739955747404057470666574707395747858557478640-0.154000.000010.02315excludedK562KHDRBS1
    SEATG4BENSG00000168397.12chr2+242592721242592784242590678242590750242592926242593025-0.183000.000020.03244excludedK562KHDRBS1
    SEAPLP2ENSG00000084234.12chr11+130007150130007186130005457130005610130010292130010378-0.164000.000000.00935excludedK562KHDRBS1
    MXEXPNPEP1ENSG00000108039.13chr10-1116527691116528331116674481116675731116514791116515841116747681116748570.230000.000530.084761includedK562KHDRBS1
    MXEABHD14A-ACY1ENSG00000114786.11chr3+52018062520181745201922252019287520122745201239052019376520194810.092000.000000.002681includedK562KHDRBS1
    MXERPS25ENSG00000118181.6chr11-1188880711188882551188886671188887631188865501188866491188889911188894000.051000.000000.000001includedK562KHDRBS1
    MXEDDX5ENSG00000108654.7chr17-62500339625004366250079462500960625001006250023462502193625024070.099000.000010.005741includedK562KHDRBS1
    MXETXLNAENSG00000084652.11chr1+32646842326471783265012532650217326452863264537732653554326537250.242000.000390.070671includedK562KHDRBS1
    MXEJTBENSG00000143543.10chr1-1539483011539483811539491681539492511539467441539473111539494511539494890.130000.000300.067421includedK562KHDRBS1
    MXEAP2M1ENSG00000161203.9chr3+1838947381838948551838968221838969101838926421838927471838979561838980390.136000.000000.003621includedK562KHDRBS1
    MXEAP2M1ENSG00000161203.9chr3+1838947381838948551838966441838969101838926421838927471838979561838980390.132000.000010.005741includedK562KHDRBS1
    MXESTRADAENSG00000266173.1chr17-61791365617914686180399761804055617907656179088761805693618057730.323000.000070.024631includedK562KHDRBS1
    MXERPL8ENSG00000161016.11chr8-1460166611460166951460171571460172991460157391460158551460173761460175250.084000.000030.015391includedK562KHDRBS1
    MXEU2AF1ENSG00000160201.7chr21-44520562445206294452147544521542445158034451585344524424445245120.124000.000000.003621includedK562KHDRBS1
    MXERP11-216L13.17ENSG00000272896.1chr9+1396860771396862291396863981396864821396858301396858761396867021396868100.138000.000000.000281includedK562KHDRBS1
    MXERFC5ENSG00000111445.9chr12+1184554941184556201184557991184558581184545081184546971184568761184569410.231000.000390.070671includedK562KHDRBS1
    MXERDH11ENSG00000072042.8chr14-68157856681579616815915468159310681569286815713868159650681597690.131000.000210.051431includedK562KHDRBS1
    MXEMELKENSG00000165304.3chr9+36583623365837093658953236589649365816403658173636594624365947680.312000.000090.029321includedK562KHDRBS1
    MXEC19orf60ENSG00000006015.13chr19+18699804187004931870166318701743186996181869971018702917187031370.454000.000030.015391includedK562KHDRBS1
    MXEGYPAENSG00000170180.15chr4-1450398661450399051450416421450417411450380061450380921450617511450617880.114000.000530.084761includedK562KHDRBS1
    MXESELENBP1ENSG00000143416.16chr1-1513387501513389291513391971513393801513382431513383221513406741513407950.232000.000140.038671includedK562KHDRBS1
    MXESEC11AENSG00000140612.9chr15-85213955852140138522394385224063852127748521330085230855852310050.122000.000090.029911includedK562KHDRBS1
    MXEBCL2L12ENSG00000126453.5chr19+50172107501721945017347250173745501699415017005650176954501771730.202000.000390.070671includedK562KHDRBS1
    MXEATG4BENSG00000168397.12chr2+2425906782425907502425929262425930252425904242425905262425939602425940620.153000.000320.067421includedK562KHDRBS1
    MXEGSTP1ENSG00000084207.11chr11+67351604673516406735215567352243673510656735131567352608673527120.108000.000100.030821includedK562KHDRBS1
    MXEDEKENSG00000124795.10chr6-18258534182586361826407318264227182581831825829318264615182647720.060000.000450.077601includedK562KHDRBS1
    MXEALKBH5ENSG00000091542.8chr17+1809826818098349181101281811028418087552180883271811153218113268-0.160000.000210.051432includedK562KHDRBS1
    MXEMDM2ENSG00000135679.17chr12+6920733369207408692105916921072569202991692030726921410469214154-0.329000.000330.067422includedK562KHDRBS1
    MXEMED25ENSG00000104973.10chr19+5032242850322553503317055033180450321827503218735033222650332347-0.145000.000650.099672includedK562KHDRBS1
    MXEUCHL5ENSG00000116750.9chr1-192989436192989511192990226192990325192984888192985525192992055192992166-0.064000.000060.023422includedK562KHDRBS1





    13 RBPs can affect the splicing of KHDRBS1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495898324960233249878832498935-0.096000.000000.00000excludedK562SF3B4
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495898324960233249878832498935-0.052000.000000.00009excludedK562PRPF8
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495898324960233249878832498935-0.085000.000000.00021excludedK562FMR1
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495842324960233249878832498935-0.189000.000000.00000excludedK562AQR
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495898324960233249878832498935-0.068000.000000.00000excludedK562PUS1
    SEKHDRBS1ENSG00000121774.13chr1+324971033249724132495898324960233249878832499000-0.071000.000000.00001excludedK562U2AF1
    SEKHDRBS1ENSG00000121774.13chr1+324971033249724132495898324960233249878832498935-0.068000.000000.00022excludedHepG2SRSF1
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495898324960233249878832498935-0.102000.000000.00000excludedK562HNRNPU
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495898324960233249878832498935-0.060000.000200.02965excludedK562CPSF6
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495898324960233249878832498935-0.142000.000000.00000excludedK562SF3B1
    SEKHDRBS1ENSG00000121774.13chr1+324971243249724132495898324960233249878832498935-0.075000.000000.00000excludedK562HNRNPC
    A5SSKHDRBS1ENSG00000121774.13chr1+3250343532503720325034353250363732504152325042200.078000.000000.00000longerK562AQR
    A5SSKHDRBS1ENSG00000121774.13chr1+325082903250840032508290325083203251093132510991-0.416000.000000.00000shorterK562AQR
    A5SSKHDRBS1ENSG00000121774.13chr1+325034353250372032503435325034693250415232504220-0.254000.000100.02078shorterK562SUPV3L1
    MXEKHDRBS1ENSG00000121774.13chr1+3250251032502644325034353250372032498788324989353250415232504220-0.096000.000000.000002includedK562AQR
    MXEKHDRBS1ENSG00000121774.13chr1+32498788324989353250251032502644324958983249602332503435325036370.054000.000380.017861includedHepG2SF3A3

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    No autoregularoty alternative splicing events between protein KHDRBS1 and its RNA.