BAD

General Information

Gene Name       : BAD
Gene ID             : ENSG00000002330.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BAD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BADENSG00000002330.130.674.562.61ENCSR000AEF
HepG2BADENSG00000002330.1314.172.518.34ENCSR985KAT
K562BADENSG00000002330.139.243.146.19ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BAD is not avaliable on ENCORE database.



Proteins bound to RNA
  • BAD RNA is bound by 4 proteins.  







eCLIP assay for BAD is not avaliable on ENCORE database.





4 proteins are bound to BAD RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116403732764037465-3'-UTR,intron-Distal,intron-Proximal4.453947.89119K562UPF1
chr116403773664037784-3'-UTR,CDS,intron-Distal,intron-Proximal4.463538.74631K562PABPC4
chr116405175264051851-5'-UTR,CDS,intron-Distal,intron-Proximal4.263673.47325K562DDX3X
chr116405169164051732-CDS,intron-Distal4.055273.19539K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BAD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BAD is not available on ENCORE database.

  • 87 RBPs can affect the levels of BAD.  








The Knockdown/knockout RNA-Seq assay for BAD is not available on ENCORE database.





87 RBPs can affect the gene expression of BAD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BADENSG00000002330.9302.09610157.283100.941505.046004.35410HepG2AKAP1
BADENSG00000002330.9241.85720125.454600.946904.675903.39440HepG2CCAR1
BADENSG00000002330.9218.61390132.401700.723404.793903.73600HepG2DDX19B
BADENSG00000002330.9429.43040150.631701.5113015.3741014.01990HepG2DDX3X
BADENSG00000002330.9223.65260136.960400.707403.808703.03800HepG2DKC1
BADENSG00000002330.999.6541042.105401.242805.318104.45750HepG2DNAJC2
BADENSG00000002330.954.3049095.43470-0.813402.158701.40400HepG2EIF4G1
BADENSG00000002330.9171.6039091.418200.908404.320603.31820HepG2EIF4G2
BADENSG00000002330.975.70200189.67260-1.325104.137803.18460HepG2FUBP3
BADENSG00000002330.9109.1429033.507201.703607.246404.95340HepG2HNRNPA0
BADENSG00000002330.9129.7663047.400701.452807.321306.37220HepG2HNRNPU
BADENSG00000002330.9101.5188037.751701.427005.357103.62630HepG2KHDRBS1
BADENSG00000002330.9303.96970132.593501.196808.005606.58370HepG2LARP4
BADENSG00000002330.9296.63900139.579501.087506.677705.73030HepG2MATR3
BADENSG00000002330.9340.20910142.852201.251809.725708.57950HepG2NCBP2
BADENSG00000002330.9147.1053095.910700.617002.280701.58810HepG2NOL12
BADENSG00000002330.966.7006018.504401.849704.873003.00290HepG2NOLC1
BADENSG00000002330.9232.3307082.611701.491706.181704.50860HepG2NONO
BADENSG00000002330.978.0854036.182001.109702.723401.84320HepG2PABPC1
BADENSG00000002330.9116.2365042.278501.459007.273506.11930HepG2PPIL4
BADENSG00000002330.939.5802081.96610-1.050202.215501.51610HepG2PRPF4
BADENSG00000002330.9167.6822091.558900.872904.087403.37840HepG2PUF60
BADENSG00000002330.9185.2602097.198300.930405.929405.12800HepG2PUM1
BADENSG00000002330.9128.5646068.607300.906002.787401.79230HepG2RBM27
BADENSG00000002330.9237.15630149.730500.663403.277302.69860HepG2NELFE
BADENSG00000002330.9127.8122048.522801.397204.518303.75280HepG2RPS19
BADENSG00000002330.9182.6223063.270001.529208.443307.09730HepG2RPS2
BADENSG00000002330.9129.6533039.779501.704507.811306.48590HepG2RPS3A
BADENSG00000002330.9118.7011064.589400.877902.663401.60890HepG2RPS5
BADENSG00000002330.9103.1076042.215201.288205.381104.53560HepG2SAFB2
BADENSG00000002330.9322.30100124.790601.368802.575101.92400HepG2SF3A3
BADENSG00000002330.9129.7757049.234901.398207.364006.39240HepG2SMN1
BADENSG00000002330.9114.6273047.953501.257102.173601.33590HepG2SMNDC1
BADENSG00000002330.947.3064090.05460-0.928802.168901.48070HepG2SNRNP70
BADENSG00000002330.9305.34130233.174700.388901.934201.49270HepG2SRFBP1
BADENSG00000002330.9169.5200090.406500.906904.879604.08650HepG2SRSF5
BADENSG00000002330.999.7153034.619101.526106.353704.62920HepG2STIP1
BADENSG00000002330.9174.30660102.812500.761503.888803.17410HepG2SUCLG1
BADENSG00000002330.933.22440131.40370-1.9837011.5635010.54100HepG2TAF15
BADENSG00000002330.977.75280120.75780-0.635102.171601.42920HepG2TIA1
BADENSG00000002330.9176.6949046.469201.9268013.9093012.78230HepG2TRIM56
BADENSG00000002330.9178.1685094.693100.911803.368202.44570HepG2UBE2L3
BADENSG00000002330.9184.42500110.669700.736703.826903.02570HepG2UPF1
BADENSG00000002330.992.5929035.633101.377604.858903.39350HepG2XPO5
BADENSG00000002330.9131.8429080.877400.704902.792202.11720HepG2ZC3H8
BADENSG00000002330.9249.16340121.716201.033508.704207.87370HepG2ZNF622
BADENSG00000002330.9127.6159069.845300.869502.991501.71290K562ABCF1
BADENSG00000002330.9208.86270100.288701.058307.223306.36970K562AGGF1
BADENSG00000002330.9193.33190104.360000.889404.965704.08020K562AKAP8L
BADENSG00000002330.9273.27900169.663200.687601.871301.37090K562AQR
BADENSG00000002330.9164.15470109.508300.583902.500201.63530K562ATP5C1
BADENSG00000002330.9156.8051051.961901.593304.255103.04700K562BCLAF1
BADENSG00000002330.996.8299043.802901.144304.081702.75220K562CCAR1
BADENSG00000002330.989.0681045.553400.967302.730601.95290K562CPSF6
BADENSG00000002330.9125.2684039.420901.667907.970706.04400K562CSTF2
BADENSG00000002330.9102.7479046.171201.153903.682301.49650K562DDX1
BADENSG00000002330.9189.20910102.984000.877504.321102.78600K562DDX21
BADENSG00000002330.989.8918045.545600.980803.275501.82060K562DDX27
BADENSG00000002330.9174.63660111.696300.644702.710001.67810K562DDX3X
BADENSG00000002330.9230.01190113.256401.022004.285703.49970K562DDX47
BADENSG00000002330.983.8967041.817601.004402.663901.77000K562EFTUD2
BADENSG00000002330.9147.0118081.938600.843203.299002.52490K562EIF2S2
BADENSG00000002330.991.9094044.757001.038002.744001.71240K562EIF3D
BADENSG00000002330.9127.1134059.875601.086004.159701.77040K562EIF3H
BADENSG00000002330.9325.35320164.817100.981007.309005.79500K562EIF4G2
BADENSG00000002330.9115.2953054.845001.071804.336002.70410K562EXOSC5
BADENSG00000002330.90.5617015.95940-4.828403.892703.02020K562G3BP2
BADENSG00000002330.9252.89200109.151501.212102.540401.81360K562GRSF1
BADENSG00000002330.9141.6719068.390801.050603.119801.80160K562HNRNPA2B1
BADENSG00000002330.9118.6325052.216701.183803.447502.79140K562HNRNPC
BADENSG00000002330.9212.70940152.307000.481802.077801.30440K562HNRNPU
BADENSG00000002330.9119.6549068.074200.813602.622201.84670K562HSPD1
BADENSG00000002330.9119.1167046.845901.346302.978801.90300K562IGF2BP2
BADENSG00000002330.988.6196044.216501.002903.145901.55810K562KHDRBS1
BADENSG00000002330.9366.31080189.891500.947805.131402.56420K562CCAR2
BADENSG00000002330.9166.65590110.734400.589702.361401.60780K562KIF1C
BADENSG00000002330.9163.80490106.014400.627602.343601.38150K562MAK16
BADENSG00000002330.9101.7266041.245201.302304.353202.62950K562NONO
BADENSG00000002330.9148.6762059.826201.313204.289502.98570K562PABPN1
BADENSG00000002330.9146.9596057.007901.366105.882104.61140K562PPIG
BADENSG00000002330.981.3318040.693700.998902.325901.63620K562PRPF8
BADENSG00000002330.9274.68610187.394100.551602.322201.44160K562PUM2
BADENSG00000002330.9190.84270103.460500.883204.479203.81180K562PUS1
BADENSG00000002330.981.7579045.818500.835302.318101.55320K562RBM22
BADENSG00000002330.9152.6136041.438901.880709.494007.96690K562RPS19
BADENSG00000002330.972.5241028.384501.353302.913901.88340K562RPS3
BADENSG00000002330.9105.5583049.970501.078802.998901.41440K562SBDS
BADENSG00000002330.9136.4758046.866301.541907.006305.89000K562SRSF1
BADENSG00000002330.968.3408027.399201.318503.018101.90690K562SRSF4
BADENSG00000002330.987.2573044.271200.978802.984101.88620K562SRSF5
BADENSG00000002330.9130.7579047.423601.463103.758902.92890K562TARDBP
BADENSG00000002330.999.7134045.747601.124003.970802.96560K562TIA1
BADENSG00000002330.990.5661044.911401.011802.968001.82890K562TRA2A
BADENSG00000002330.9249.87750174.248400.520002.787501.51120K562TROVE2
BADENSG00000002330.979.3422041.688200.928402.207301.30540K562UCHL5
BADENSG00000002330.9252.03160138.867200.859804.792903.87400K562UPF1
BADENSG00000002330.9107.7941042.467501.343704.745703.00330K562XRN2
BADENSG00000002330.9310.04930191.127300.697904.519203.37350K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BAD is not available on ENCORE database.





5 RBPs can affect the splicing of BAD :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBADENSG00000002330.9chr11-640443756404451564039084640392756405165364051848-0.154000.000320.02606excludedHepG2AKAP1
SEBADENSG00000002330.9chr11-640443756404451564039084640392756405165364051848-0.161000.000050.00707excludedHepG2DDX3X
SEBADENSG00000002330.9chr11-640443756404451564039084640392756405165364051848-0.173000.000010.00165excludedHepG2NCBP2
SEBADENSG00000002330.9chr11-640443756404451564039084640392756405165364051848-0.181000.000000.00030excludedHepG2MATR3
SEBADENSG00000002330.9chr11-640443756404451564039084640392756405165364051848-0.152000.000410.03852excludedHepG2DDX6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BAD is not avaliable on ENCORE database.