DDX21

General Information

Gene Name       : DDX21
Gene ID             : ENSG00000165732.12
Essential Gene : Yes

Functions

Localization(RBPImage: DDX21)

Domains (AlphaFold: DDX21)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DDX21ENSG00000165732.12140.57123.69132.13ENCSR000AEF
HepG2DDX21ENSG00000165732.1257.73107.2682.50ENCSR985KAT
K562DDX21ENSG00000165732.12228.73245.25236.99ENCSR000AEO

Assays

5 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 284ENCSR040QLVDDX21K562ReleasedENCAB315FWLENCSR266XXD  
knockdown followed by RNA-seq DDX21-BGKLV11-K562ENCSR961WVLDDX21K562ReleasedENCSR129RWD   shRNAKD% = 90.9,86.2
knockdown followed by RNA-seq DDX21-BGHLV14-HepG2ENCSR485ZTCDDX21HepG2ReleasedENCSR003EKR   shRNAKD% = 90.6,92.5
knockdown followed by RNA-seq DDX21-BGKcLV02-K562ENCSR384LKCDDX21K562ReleasedENCSR163JUC   CRISPRKD% = 94.5,96.4
knockdown followed by RNA-seq DDX21-BGHcLV03-HepG2ENCSR231RKUDDX21HepG2ReleasedENCSR105NML   CRISPRKD% = NO band, need add more protein,






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
DDX21284K562ENCSR040QLVENCSR266XXDENCAB315FWLRN090PW1ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
DDX21ENCAB315FWLRN090PW1Released, ENCODE3Released, ENCODE3BGHLV14-9, Released, ENCODE3BGKLV11-9, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
DDX21K562shRNAENCSR961WVLENCSR129RWDDDX21-LV11-9,DDX21-LV11-10Nontarget-LV11-1,nontarget-LV11-290.9,86.2ReleasedENCODE3
DDX21HepG2shRNABGHLV12-11,BGHLV12-12BGHLV12-1,BGHLV12-2NotSatisfiedENCODE3
DDX21HepG2shRNAENCSR485ZTCENCSR003EKRDDX21_BGHLV14-9,DDX21_BGHLV14-10NT_BGHLV14-1_1,NT_BGHLV14-2_190.6,92.5ReleasedENCODE3
DDX21K562CRISPRENCSR384LKCENCSR163JUCDDX21_BGKcLV02-11,DDX21_BGKcLV02-12NT_BGKcLV02-1,NT_BGKcLV02-294.5,96.4ReleasedENCODE3
DDX21HepG2CRISPRENCSR231RKUENCSR105NMLDDX21_BGHcLV03-9,DDX21_BGHcLV03-10NT_BGHcLV03-1,NT_BGHcLV03-2NO band, need add more protein,ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    DDX21: Click to RBP Image Database
  • Nuclei
  • Nucleolus
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    DDX21Product_ID: RN090PW
    Lot_ID: 1
    Source: MBLI
    Target Name: DDX21-human    		 HepG2_MBLI_RN090PW_001_DDX21.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using DDX21 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-DDX21 antibody (lanes under 'DDX21').
    		 DDX21_Secondary_Western.png<br>Caption: Western blot following shRNA against DDX21 in K562 and HepG2 whole cell lysate using DDX21 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against DDX21. Lanes 5-8 follow the same pattern, but in HepG2. DDX21 protein appears as the green band, Tubulin serves as a control and appears in red.
    		 K5622_MBLI_RN090PW_001_DDX21.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using DDX21 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-DDX21 antibody (lanes under 'DDX21').
    		 DDX21-K562-CRISPR.png<br>Caption: Western blot following CRISPR against DDX21 in K562 whole cell lysate using DDX21 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against DDX21. DDX21 protein appears as the green band, Tubulin serves as a control and appears in red.
    DDX21_Secondary_Western.png<br>Caption: Western blot following shRNA against DDX21 in K562 and HepG2 whole cell lysate using DDX21 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against DDX21. Lanes 5-8 follow the same pattern, but in HepG2. DDX21 protein appears as the green band, Tubulin serves as a control and appears in red.








    RNA Targets
    • DDX21 protein binds to 75 RNA regions.  





    Proteins bound to RNA
    • DDX21 RNA is bound by 35 proteins.  






    DDX21 protein has 75 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 75 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    DDX21chr2133015323133015339-6.9243316.99075K562ANKRD30BLintron-Distal
    DDX21chrX118921314118921328-3.1156711.47606K562RPL39intron-Distal
    DDX21chr1145442544145442552+3.548807.56405K562TXNIP3'-UTR
    DDX21chr1260544106054420-5.4147033.38886K562ANO2intron-Distal
    DDX21chr16383334163833366+4.002245.80101K562ALG65'-UTR,intron-Proximal
    DDX21chr202618015226180159-6.188854.21048K562MIR663Aintron-Distal
    DDX21chr11122929668122929682-3.5236343.57308K562HSPA85'-UTR,intron-Distal,intron-Proximal
    DDX21chrM1446114491-3.5647830.52884K562MT-ND6CDS
    DDX21chr167282159272821655-3.221124.87310K562ZFHX3CDS,intron-Distal
    DDX21chr202618997126190023-4.80920400.00000K562MIR663Aintron-Distal,intron-Proximal
    DDX21chr11126146220126146261+5.502245.04377K562FOXRED1intron-Proximal
    DDX21chr202618979326189813-4.2006417.28416K562MIR663Aintron-Distal,intron-Proximal
    DDX21chrX149108512149108558+5.730086.58718K562LINC00894intron-Distal
    DDX21chr191326234013262371+4.341284.44897K562IER2intron-Distal
    DDX21chr9136217720136217754+3.32413400.00000K562RPL7Aintron-Distal
    DDX21chr202618981326189820-4.1378717.28416K562MIR663Aintron-Distal,intron-Proximal
    DDX21chr84865053548650552-3.158364.77687K562CEBPDCDS
    DDX21chr29756004697560098-5.7620345.86519K562FAM178Bintron-Distal
    DDX21chr111709627517096286-3.8318510.92696K562RPS13intron-Distal
    DDX21chr2133015227133015271-5.891057.57526K562ANKRD30BLintron-Distal
    DDX21chr9136217754136217770+3.4039776.17843K562RPL7Aintron-Distal,intron-Proximal
    DDX21chr10135272288135272330+3.361604.56997K562RP11-108K14.4intron-Distal
    DDX21chr1173835451173835467-3.8963726.23838K562GAS5intron-Distal
    DDX21chr223888220038882289-3.246597.34544K562DDX17CDS,intron-Distal
    DDX21chr202618982326189872-3.112388.27102K562MIR663Aintron-Distal,intron-Proximal
    DDX21chr116262209162622118-3.2072729.58404K562SNHG1intron-Distal,intron-Proximal
    DDX21chr5111497278111497315+3.1364460.01482K562EPB41L4A-AS1intron-Distal,intron-Proximal
    DDX21chr11122929630122929641-3.1018359.76601K562HSPA85'-UTR,intron-Distal,intron-Proximal
    DDX21chr48381700583817075-3.3391325.94165K562THAP9-AS1, SEC31Aintron-Distal,intron-Proximal
    DDX21chr896296089629687+4.891057.57526K562TNKSintron-Distal
    DDX21chr9126030039126030090-5.778515.98811K562STRBPintron-Distal
    DDX21chr3141153238141153272+6.495344.21048K562ZBTB38intron-Distal
    DDX21chr7151845169151845215-5.4506312.19429K562KMT2C3'-UTR,CDS,intron-Distal
    DDX21chr16447747447776+5.580304.79914K562NME45'-UTR,intron-Distal
    DDX21chr1228285904228285939+3.029647.65351K562ARF13'-UTR,intron-Distal
    DDX21chr93395277233952826-3.794727.43058K562UBAP2intron-Distal
    DDX21chr1266196956619718+3.3491130.62026K562NCAPD2intron-Distal,intron-Proximal
    DDX21chr5134259875134259915+3.083695.65103K562PCBD2intron-Distal
    DDX21chr9125642499125642540-3.0308713.84802K562RC3H2intron-Distal,intron-Proximal
    DDX21chr2133015307133015323-6.9243316.99075K562ANKRD30BLintron-Distal
    DDX21chr119345485193454885+3.5150157.41138K562KIAA1731intron-Distal
    DDX21chr1985509338550995+3.361606.73203K562HNRNPM3'-UTR,CDS
    DDX21chr11122930079122930123-3.23813400.00000K562HSPA85'-UTR,intron-Distal,intron-Proximal
    DDX21chr11122929615122929618-3.6824969.02976K562HSPA85'-UTR,intron-Distal,intron-Proximal
    DDX21chr194670120346701256-3.4024114.22852K562AC006262.5intron-Distal
    DDX21chr202618995426189971-4.7694061.87805K562MIR663Aintron-Distal,intron-Proximal
    DDX21chr139278810992788132+5.645124.21048K562GPC5intron-Distal
    DDX21chr3197901360197901413+5.535805.98811K562FAM157Aintron-Distal
    DDX21chrX118921328118921362-3.1387535.48620K562RPL39intron-Distal
    DDX21chr11122929644122929665-3.35204400.00000K562HSPA85'-UTR,intron-Distal
    DDX21chr29755996297560046-4.1236555.41190K562FAM178Bintron-Distal
    DDX21chr1109289380109289410+4.124804.90972K562STXBP3CDS,intron-Proximal
    DDX21chr172077274320772826+3.715218.51201K562RP11-344E13.3intron-Distal
    DDX21chr165090335750903391-3.573379.61186K562CTD-2034I21.1intron-Distal
    DDX21chr111709625517096275-4.0147270.58401K562RPS13intron-Distal
    DDX21chr54083275840832829-3.0601024.60871K562RPL37intron-Distal
    DDX21chr111709732317097363-3.3909687.51971K562RPS13intron-Distal
    DDX21chr84865052748650535-3.158364.77687K562CEBPDCDS
    DDX21chr153877669338776746+4.598575.19527K562FAM98BCDS,intron-Proximal
    DDX21chr178023070680230756-3.726876.35536K562CSNK1Dintron-Distal
    DDX21chr61626644016266483+4.1299072.20744K562GMPRintron-Distal
    DDX21chr31036263210362684-3.604554.24353K562SEC135'-UTR,intron-Distal
    DDX21chr1260543956054410-5.4147033.38886K562ANO2intron-Distal
    DDX21chr8142425874142425931+5.391055.39192K562PTP4A3intron-Distal
    DDX21chr111709736317097397-3.2282654.88256K562RPS13intron-Distal
    DDX21chr61626639916266414+5.0001239.01475K562GMPRintron-Distal
    DDX21chr61626641416266440+4.6491183.98397K562GMPRintron-Distal
    DDX21chr111709623517096255-3.6767962.60093K562RPS13intron-Distal
    DDX21chr1173835444173835451-4.1909727.09850K562GAS5intron-Distal
    DDX21chr168955574889555807-3.614426.19671K562ANKRD11intron-Distal
    DDX21chr68635282886352887-3.891056.33361K562SYNCRIP5'-UTR,intron-Distal
    DDX21chr1985507718550844+3.6538310.53885K562HNRNPM3'-UTR,CDS
    DDX21chr77236841672368472+4.522563.71434K562POM121intron-Distal
    DDX21chr1914092531409294+3.451894.56997K562DAZAP1intron-Distal
    DDX21chr11122930040122930079-3.20382400.00000K562HSPA85'-UTR,intron-Distal,intron-Proximal




    35 proteins are bound to DDX21 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr107074349770743543+3'-UTR3.444655.90347K562IGF2BP1
    chr107074278270742829+3'-UTR5.100238.24461K562IGF2BP1
    chr107074471070744756+3'-UTR4.5145722.86474K562TIA1
    chr107074279470742881+3'-UTR3.814063.07706HepG2TIAL1
    chr107074470070744753+3'-UTR4.188854.23960HepG2TIAL1
    chr107074423770744277+3'-UTR4.707986.81022K562IGF2BP1
    chr107074283470742906+3'-UTR4.092638.41305K562TIA1
    chr107074472570744750+3'-UTR6.61874400.00000K562PABPC4
    chr107074453570744611+3'-UTR5.2377818.64858K562IGF2BP1
    chr107074470270744750+3'-UTR3.263198.62271HepG2DDX55
    chr107074470470744725+3'-UTR6.35227400.00000K562PABPC4
    chr107074460970744672+3'-UTR3.1417120.06920K562PUM2
    chr107074339970743455+3'-UTR3.150459.73042K562ZC3H11A
    chr107074470570744792+3'-UTR3.639998.23127K562KHSRP
    chr107074346870743507+3'-UTR3.8106412.87392K562PABPC4
    chr107074417070744237+3'-UTR3.7169410.39078K562IGF2BP1
    chr107074283870742886+3'-UTR3.613714.53184K562IGF2BP1
    chr107074417470744213+3'-UTR4.2919110.06644K562TIA1
    chr107074470270744753+3'-UTR3.6379411.71478K562DDX6
    chr107074303770743050+3'-UTR3.245828.09458K562YBX3
    chr107074470470744749+3'-UTR4.1923213.91240K562ZC3H11A
    chr107074277770742820+3'-UTR3.053978.72722K562PUM2
    chr107074463170744682+3'-UTR3.940086.71479HepG2FUBP3
    chr107074470470744750+3'-UTR4.1117111.07966K562APOBEC3C
    chr107074367370743759+3'-UTR7.3020631.06342HepG2SUB1
    chr107074470570744751+3'-UTR4.611243.65261HepG2TIA1
    chr107074290670742952+3'-UTR3.1800311.42878HepG2SUB1
    chr107074375970743820+3'-UTR5.0026828.75311HepG2SUB1
    chr107074476970744800+3'-UTR5.7188413.89399K562PUM2
    chr107074306670743096+3'-UTR3.3865711.77309K562YBX3
    chr107074414070744170+3'-UTR3.701946.35062K562IGF2BP1
    chr107074294970742980+3'-UTR3.211193.25727K562METAP2
    chr107074328670743367+3'-UTR3.0747134.08669K562PUM2
    chr107074470470744769+3'-UTR3.8003436.51660K562PUM2
    chr107074468770744750+3'-UTR3.314478.77682K562DDX55
    chr107074314870743212+3'-UTR3.8519312.75694HepG2SUB1
    chr107071592570715992+5'-UTR,CDS4.4583043.35622K562DDX3X
    chr107071593370715994+5'-UTR,CDS4.8629517.24176K562FMR1
    chr107071593170716008+5'-UTR,CDS4.7853321.75955K562FXR2
    chr107073740270737430+CDS3.086343.34231K562RBM15
    chr107072881270728875+CDS3.234373.47996HepG2GRWD1
    chr107072873170728753+CDS,intron-Proximal4.565425.04143K562GRWD1
    chr107071956670719712+CDS3.895519.35921HepG2GRWD1
    chr107072513370725148+CDS3.955853.79347HepG2GRWD1
    chr107073862470738644+CDS3.0576511.11248K562YBX3
    chr107073164670731682+CDS,intron-Proximal3.231149.39295K562YBX3
    chr107072693670726957+CDS3.365923.77614HepG2G3BP1
    chr107073731570737364+CDS3.022223.28855HepG2GRWD1
    chr107072189470721914+CDS,intron-Proximal4.0544113.36061K562PUM1
    chr107072304670723089+CDS,intron-Proximal4.2061117.71485HepG2BCLAF1
    chr107071956470719672+CDS4.6843717.32470HepG2BCLAF1
    chr107072876070728787+CDS3.5452810.33108K562UCHL5
    chr107071975070719804+CDS4.834809.74753HepG2BCLAF1
    chr107073859870738624+CDS3.4021412.34918K562YBX3
    chr107071982270719911+CDS4.603743.80886HepG2TRA2A
    chr107072873170728795+CDS,intron-Proximal4.0296513.38279HepG2BCLAF1
    chr107073742970737443+CDS3.361167.38488K562YBX3
    chr107071961270719640+CDS3.8039116.44414K562UCHL5
    chr107072189270721913+CDS3.900565.48341K562GRWD1
    chr107072304670723060+CDS,intron-Proximal3.151555.00109HepG2GRWD1
    chr107072304670723095+CDS,intron-Proximal3.8823616.41674K562PUM1
    chr107072317370723209+CDS3.635435.15500HepG2BCLAF1
    chr107072688670726960+CDS,intron-Proximal3.750387.67656HepG2GRWD1
    chr107072880370728876+CDS3.380177.55983K562BUD13
    chr107073005970730095+CDS3.392889.89473K562UCHL5
    chr107072677970726839+CDS3.148504.02727K562TARDBP
    chr107072189770721913+CDS3.632707.65986K562ZNF800
    chr107074238370742438+CDS3.8580423.26171K562UCHL5
    chr107072884570728863+CDS3.129409.38398K562YBX3
    chr107071988870719924+CDS3.4058313.83189K562UCHL5
    chr107073179670731808+CDS3.127919.06656K562YBX3
    chr107071982370719889+CDS3.064514.16775K562TRA2A
    chr107071599270716069+CDS,intron-Proximal3.9586041.57971K562DDX3X
    chr107072188170721894+CDS3.587919.36208K562UCHL5
    chr107073006570730096+CDS3.770316.18214HepG2GRWD1
    chr107073173170731771+CDS4.376634.83675HepG2G3BP1
    chr107072187070721894+CDS3.687824.02291HepG2GRWD1
    chr107071967270719750+CDS4.6685120.88881HepG2BCLAF1
    chr107074127170741315+CDS,intron-Proximal4.145824.49024K562AQR
    chr107072189470721913+CDS3.4155916.13645K562UCHL5
    chr107071987570719995+CDS5.6664132.43569HepG2BCLAF1
    chr107071990570719991+CDS3.885567.44807HepG2GRWD1
    chr107072875670728812+CDS3.998565.28199HepG2GRWD1
    chr107072688570726918+CDS3.316063.34231K562RBM15
    chr107072311370723200+CDS3.103363.36482K562FXR1
    chr107072311970723191+CDS3.053595.85714K562MTPAP
    chr107072187570721913+CDS4.8268419.99415HepG2BCLAF1
    chr107073872970738779+CDS,intron-Proximal3.629329.25254HepG2PRPF8
    chr107071958270719633+CDS3.3710014.02072K562ZNF622
    chr107073739270737436+CDS3.399347.66618K562FXR2
    chr107073326170733357+CDS,intron-Proximal3.5997113.94127K562SF3B4
    chr107072184270721870+CDS4.170274.21087HepG2GRWD1
    chr107071982470719875+CDS5.636099.32793HepG2BCLAF1
    chr107071599270716064+CDS3.539087.44851HepG2GRWD1
    chr107074244370742499+CDS3.041933.92673HepG2G3BP1
    chr107071992470719999+CDS3.2586529.95597K562UCHL5
    chr107072693470726959+CDS3.391547.70981K562GRWD1
    chr107071599870716035+CDS5.4337120.28602K562UCHL5
    chr107071987870719987+CDS3.1401729.65795K562ZNF622
    chr107072304670723072+CDS,intron-Proximal3.414215.48645K562GRWD1
    chr107071956770719580+CDS4.1479114.10437K562UCHL5
    chr107071958570719679+CDS4.694034.69573HepG2TRA2A
    chr107071603570716057+CDS4.8313517.04031K562UCHL5
    chr107073728470737347+CDS,intron-Proximal3.461518.46496HepG2BUD13
    chr107072871470728754+CDS,intron-Proximal3.191237.07421HepG2BUD13
    chr107072185770721915+CDS,intron-Proximal3.0802711.33573K562DDX24
    chr107072304570723068+CDS,intron-Proximal3.190275.76475K562ZNF800
    chr107074246170742518+CDS3.7878025.55688K562UCHL5
    chr107071996670719994+CDS3.321915.55412K562IGF2BP1
    chr107072677270726823+CDS,intron-Proximal3.784715.31167HepG2GRWD1
    chr107072000070720031+CDS,intron-Proximal3.8803613.98297K562AQR
    chr107073729270737338+CDS3.500873.48848HepG2FXR2
    chr107072310470723130+CDS3.7586913.54289K562YBX3
    chr107074243870742461+CDS3.6212021.85397K562UCHL5
    chr107072883470728863+CDS3.715666.39464HepG2BCLAF1
    chr107072875670728773+CDS3.116217.60260K562ZNF622
    chr107072306670723104+CDS3.5065018.70360K562YBX3
    chr107072689470726960+CDS,intron-Proximal3.3477012.03080HepG2BCLAF1
    chr107072186870721894+CDS3.687759.44978K562PUM1
    chr107072304670723078+CDS,intron-Proximal3.0298818.15309K562UCHL5
    chr107072171370721822+intron-Distal,intron-Proximal3.524145.39758K562KHSRP
    chr107072747270727498+intron-Distal3.297594.13620K562KHSRP
    chr107073878570738854+intron-Distal,intron-Proximal3.542986.73756K562PRPF8
    chr107072532870725369+intron-Distal,intron-Proximal4.847433.85435K562PRPF8
    chr107072741970727472+intron-Distal4.022558.11138K562KHSRP
    chr107073182470732001+intron-Distal,intron-Proximal3.2031412.43452K562PRPF8
    chr107072003170720077+intron-Proximal4.5635917.38112K562AQR
    chr107072194670721983+intron-Proximal4.596444.58968K562PRPF8
    chr107073013470730194+intron-Proximal4.724535.09266K562RBM22
    chr107073450970734567+intron-Proximal4.635685.70555K562PRPF8
    chr107073873670738768+intron-Proximal5.172064.86944K562AQR
    chr107073720570737258+intron-Proximal3.737275.38829K562KHSRP
    chr107072696370727000+intron-Proximal4.888895.65342K562AQR
    chr107071607070716112+intron-Proximal4.268386.99120K562AQR
    chr107072889170728932+intron-Proximal5.049856.22530K562AQR
    chr107073010770730149+intron-Proximal3.727156.42898K562AQR
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein DDX21 and its RNA.



    Diffrential Expression
    • 8,193 differentially expressed genes after Knockdown/Knockout DDX21 protein.  





    • 154 RBPs can affect the levels of DDX21.  







    8,193 differentially expressed genes after Knockdown/Knockout DDX21 protein :

    Only display 100 entries as example. Please click "View All" button to see all 8,193 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    SCYL3ENSG00000000457.9198.02930117.108700.757803.437402.68790HepG2DDX21
    C1orf112ENSG00000000460.12151.04220346.35510-1.197309.314408.14750HepG2DDX21
    NFYAENSG00000001167.10661.49160854.84460-0.369902.676802.00850HepG2DDX21
    STPG1ENSG00000001460.13121.7378067.011300.861203.005402.30110HepG2DDX21
    LAS1LENSG00000001497.12557.59840699.78640-0.327701.971801.38650HepG2DDX21
    CYP51A1ENSG00000001630.114326.648203006.887200.524907.391606.33660HepG2DDX21
    LAP3ENSG00000002549.81093.284502013.75150-0.8812016.2596014.77890HepG2DDX21
    CD99ENSG00000002586.132616.572201839.079800.508606.439105.45240HepG2DDX21
    ALS2ENSG00000003393.101431.429801040.598000.459904.554403.70830HepG2DDX21
    CFLARENSG00000003402.151925.080701613.805400.254401.878101.30730HepG2DDX21
    TFPIENSG00000003436.101978.030107531.56590-1.9289088.6494085.82460HepG2DDX21
    RBM5ENSG00000003756.123024.708002289.426200.401704.391403.55630HepG2DDX21
    SLC7A2ENSG00000003989.122350.683605554.48240-1.2406037.8279035.76870HepG2DDX21
    ARF5ENSG00000004059.6928.38140699.828900.407603.228202.49920HepG2DDX21
    POLDIP2ENSG00000004142.7977.400901583.27640-0.695909.773508.58160HepG2DDX21
    PLXND1ENSG00000004399.8914.088901682.68480-0.880409.561208.38100HepG2DDX21
    AK2ENSG00000004455.122040.352803006.72480-0.559407.900506.81400HepG2DDX21
    FKBP4ENSG00000004478.5794.326501465.72170-0.8838014.6257013.20920HepG2DDX21
    KDM1AENSG00000004487.111792.449702946.56410-0.717107.773806.69460HepG2DDX21
    RBM6ENSG00000004534.102372.383003235.55210-0.447705.338204.42800HepG2DDX21
    ARHGAP33ENSG00000004777.1459.94270174.84830-1.544409.344308.17630HepG2DDX21
    NDUFAB1ENSG00000004779.5762.528201072.47030-0.492104.048403.24200HepG2DDX21
    ST7ENSG00000004866.14242.59140321.95230-0.408301.876101.30580HepG2DDX21
    PRSS22ENSG00000005001.533.435000.553105.917708.312607.20400HepG2DDX21
    SKAP2ENSG00000005020.8998.66870429.063401.2187014.9567013.52690HepG2DDX21
    SLC25A5ENSG00000005022.53200.426403962.25910-0.308102.948702.25060HepG2DDX21
    DHX33ENSG00000005100.8946.534801172.91900-0.309402.237101.61980HepG2DDX21
    ACSM3ENSG00000005187.71316.59840855.143600.622505.798504.85620HepG2DDX21
    CIAPIN1ENSG00000005194.101128.67690878.694300.361102.713502.04100HepG2DDX21
    PON1ENSG00000005421.449.8048011.054702.171504.970104.08840HepG2DDX21
    WDR54ENSG00000005448.12128.78220255.39340-0.987803.223802.49570HepG2DDX21
    CROTENSG00000005469.7587.37940195.591101.5864023.9422022.22660HepG2DDX21
    ABCB4ENSG00000005471.11338.22630736.82180-1.1233016.0603014.58470HepG2DDX21
    RHBDD2ENSG00000005486.12523.81860345.428100.600604.583103.73490HepG2DDX21
    ZNF195ENSG00000005801.12534.55300365.370400.548902.216901.60290HepG2DDX21
    FBXL3ENSG00000005812.6252.07580371.29800-0.558702.888902.19710HepG2DDX21
    ITGA3ENSG00000005884.13176.1649058.367401.593602.259101.63790HepG2DDX21
    LAMP2ENSG00000005893.112783.807303710.72680-0.414604.904004.02810HepG2DDX21
    ITGA2BENSG00000005961.135.4826034.89150-2.670005.020704.13530HepG2DDX21
    ASB4ENSG00000005981.822.4069078.00410-1.799606.203605.23530HepG2DDX21
    GDE1ENSG00000006007.72526.698601437.616400.8135014.5843013.16980HepG2DDX21
    CRLF1ENSG00000006016.61500.197402941.74000-0.971503.075802.36330HepG2DDX21
    OSBPL7ENSG00000006025.7354.07150174.220501.023008.696207.56360HepG2DDX21
    TMEM98ENSG00000006042.7407.725201344.76480-1.7217044.7637042.52520HepG2DDX21
    MAP3K14ENSG00000006062.9130.6616075.369100.793702.800602.11920HepG2DDX21
    CX3CL1ENSG00000006210.62818.480401817.790400.632609.683008.49520HepG2DDX21
    SPATA20ENSG00000006282.151455.95000980.060900.570906.666705.66370HepG2DDX21
    TNFRSF12AENSG00000006327.9704.29110400.558400.814108.920107.77380HepG2DDX21
    RALAENSG00000006451.3921.86170547.197000.752408.750107.61500HepG2DDX21
    JHDM1DENSG00000006459.6375.714001708.50570-2.1850073.8792071.24280HepG2DDX21
    ALDH3B1ENSG00000006534.11286.75180139.000201.044607.582106.51580HepG2DDX21
    ARHGAP44ENSG00000006740.1228.7798070.67780-1.296203.569502.80690HepG2DDX21
    PNPLA4ENSG00000006757.7311.32600210.647400.563502.999602.29590HepG2DDX21
    ADIPOR2ENSG00000006831.91979.822602835.61510-0.518306.787305.77340HepG2DDX21
    MARK4ENSG00000007047.10332.58780546.44930-0.716403.950703.15320HepG2DDX21
    PAFAH1B1ENSG00000007168.81476.732201937.72880-0.392003.850103.06300HepG2DDX21
    PAX6ENSG00000007372.163.4142016.23720-2.249702.092801.49370HepG2DDX21
    RHBDF1ENSG00000007384.11257.88810164.073400.652303.386202.64100HepG2DDX21
    BAIAP3ENSG00000007516.958.2251098.50980-0.758602.075601.47860HepG2DDX21
    TEAD3ENSG00000007866.14916.62490690.433400.408703.231102.50170HepG2DDX21
    E2F2ENSG00000007968.665.21540212.31950-1.7030011.5449010.27020HepG2DDX21
    CDKL5ENSG00000008086.6164.5883083.248500.983304.577703.73000HepG2DDX21
    CYB561ENSG00000008283.1117.8356044.42370-1.316602.486101.84000HepG2DDX21
    SPAG9ENSG00000008294.162485.305003101.41860-0.319502.998702.29520HepG2DDX21
    AASSENSG00000008311.10608.39240437.258700.476403.359302.61660HepG2DDX21
    PLEKHG6ENSG00000008323.11494.09760245.190901.0108010.327209.10950HepG2DDX21
    ST3GAL1ENSG00000008513.101100.658501444.22730-0.391903.551602.79080HepG2DDX21
    IL32ENSG00000008517.123751.307201716.254901.1280029.3268027.46990HepG2DDX21
    MAPK8IP2ENSG00000008735.10124.5346040.614201.616407.779206.69930HepG2DDX21
    MED24ENSG00000008838.131196.533201634.38320-0.449903.054802.34450HepG2DDX21
    RHOBTB2ENSG00000008853.12722.64230258.600901.4825024.4576022.72530HepG2DDX21
    HEATR5BENSG00000008869.71101.85450701.383700.651607.490706.43080HepG2DDX21
    RPS20ENSG00000008988.54404.993105314.21750-0.270702.435301.79500HepG2DDX21
    CSDE1ENSG00000009307.117882.345109477.03360-0.265802.540001.88710HepG2DDX21
    UBE3CENSG00000009335.131601.806401191.430200.426904.117903.30580HepG2DDX21
    REV3LENSG00000009413.111706.053301124.207500.601707.636306.56530HepG2DDX21
    MASP2ENSG00000009724.12197.74160133.189900.570002.315701.68760HepG2DDX21
    IYDENSG00000009765.1043.426002.833603.937705.992805.03810HepG2DDX21
    FAM76AENSG00000009780.11150.2149097.484900.623702.100201.50020HepG2DDX21
    MLXIPLENSG00000009950.113288.462502267.796400.536004.708303.84960HepG2DDX21
    ETV7ENSG00000010030.97.613900.0000099999.999902.011301.42180HepG2DDX21
    SPRTNENSG00000010072.11219.23120119.109500.880104.732203.87150HepG2DDX21
    DYRK4ENSG00000010219.9102.29550153.38610-0.584402.023201.43240HepG2DDX21
    UQCRC1ENSG00000010256.61899.100702884.43100-0.603008.873207.72940HepG2DDX21
    CD9ENSG00000010278.791.14150226.45530-1.313009.227608.06420HepG2DDX21
    NCAPD2ENSG00000010292.81529.741503185.84020-1.0584011.3674010.10370HepG2DDX21
    IFFO1ENSG00000010295.15351.34370226.940000.630503.941303.14570HepG2DDX21
    GIPRENSG00000010310.47.6768058.58530-2.932008.969707.82080HepG2DDX21
    SEMA3GENSG00000010319.2411.24440629.10860-0.613305.254604.34900HepG2DDX21
    SLC6A13ENSG00000010379.1130.890105.182502.575303.943503.14730HepG2DDX21
    CD4ENSG00000010610.550.77310122.28470-1.268105.409204.49400HepG2DDX21
    LRRC23ENSG00000010626.10149.9421090.301600.731502.665601.99860HepG2DDX21
    FYNENSG00000010810.13503.66890728.59430-0.532604.464503.62430HepG2DDX21
    HIVEP2ENSG00000010818.4382.428601055.21210-1.4643030.3075028.42300HepG2DDX21
    TCEB3ENSG00000011007.8669.70800846.32440-0.337702.265001.64300HepG2DDX21
    NME2ENSG00000011052.1740.41040157.98980-1.967009.052907.89970HepG2DDX21
    TSPAN9ENSG00000011105.7669.62410981.64530-0.551905.375504.46150HepG2DDX21
    ABHD5ENSG00000011198.3119.6545060.169700.991703.647002.87660HepG2DDX21
    MBTD1ENSG00000011258.11814.952901336.56310-0.713709.593608.41000HepG2DDX21
    UTP18ENSG00000011260.9609.57350835.71830-0.455202.999802.29590HepG2DDX21
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    154 RBPs can affect the gene expression of DDX21 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    DDX21ENSG00000165732.83719.592802935.079600.341603.325002.15700HepG2AATF
    DDX21ENSG00000165732.84100.999905948.66830-0.536602.885001.92380HepG2ABCF1
    DDX21ENSG00000165732.82874.646603636.02390-0.339002.905401.88470HepG2ADAR
    DDX21ENSG00000165732.87856.081805684.891400.466604.159003.52500HepG2AKAP1
    DDX21ENSG00000165732.83349.788504253.34850-0.344506.492905.36550HepG2AKAP8L
    DDX21ENSG00000165732.84955.742807496.98470-0.5972021.1887019.61570HepG2AUH
    DDX21ENSG00000165732.82965.667204261.80080-0.523104.322603.14860HepG2BCCIP
    DDX21ENSG00000165732.81959.952803703.43030-0.9180013.7282011.94900HepG2BCLAF1
    DDX21ENSG00000165732.83180.980304458.73920-0.487202.744301.51680HepG2BUD13
    DDX21ENSG00000165732.82959.250907857.17060-1.408806.285004.78980HepG2CCAR1
    DDX21ENSG00000165732.83374.810604468.98210-0.405103.806502.90910HepG2CIRBP
    DDX21ENSG00000165732.83235.159705471.79580-0.758206.169905.02900HepG2CNOT7
    DDX21ENSG00000165732.83654.281806822.11550-0.9006018.8991017.29730HepG2CPSF6
    DDX21ENSG00000165732.86249.959505024.256200.314805.340804.50040HepG2CELF1
    DDX21ENSG00000165732.84312.198905402.65570-0.325208.978007.76250HepG2DAZAP1
    DDX21ENSG00000165732.83067.975203733.90860-0.283403.725002.39110HepG2DDX1
    DDX21ENSG00000165732.8624.138703240.05010-2.3761045.2069042.96190HepG2DDX21
    DDX21ENSG00000165732.83227.805105445.95770-0.7546010.577109.42730HepG2DDX3X
    DDX21ENSG00000165732.84142.185005147.40600-0.313502.747901.73880HepG2DDX5
    DDX21ENSG00000165732.82483.809403531.32940-0.507706.822305.33710HepG2DHX30
    DDX21ENSG00000165732.82166.443804050.09110-0.9026037.7585036.01280HepG2DKC1
    DDX21ENSG00000165732.83059.541803661.31920-0.259003.329702.56330HepG2DNAJC21
    DDX21ENSG00000165732.81012.377003628.94450-1.84180164.49750160.82930HepG2DNAJC2
    DDX21ENSG00000165732.82452.955303703.94350-0.594507.409005.98150HepG2EEF2
    DDX21ENSG00000165732.82092.660404497.27710-1.1037018.8689017.41880HepG2EIF2S1
    DDX21ENSG00000165732.83684.635303006.913800.293102.327401.49200HepG2EIF3D
    DDX21ENSG00000165732.82774.619304970.31590-0.8410011.3188010.05570HepG2EIF4A3
    DDX21ENSG00000165732.87306.665405329.752700.4550011.9108010.41170HepG2EIF4G1
    DDX21ENSG00000165732.83460.543205105.61560-0.561107.915006.56910HepG2EIF4G2
    DDX21ENSG00000165732.87430.980008607.71620-0.212103.250602.60740HepG2ETF1
    DDX21ENSG00000165732.81911.724802687.16300-0.491207.494105.54940HepG2FAM120A
    DDX21ENSG00000165732.83765.777206833.85740-0.859804.514803.22550HepG2FTO
    DDX21ENSG00000165732.82584.649704064.72490-0.653205.480303.94590HepG2FUS
    DDX21ENSG00000165732.83957.030005013.94470-0.341502.825002.12510HepG2FXR1
    DDX21ENSG00000165732.83145.309404651.64010-0.564505.916704.96010HepG2G3BP1
    DDX21ENSG00000165732.83608.066304937.69660-0.452604.663403.49320HepG2G3BP2
    DDX21ENSG00000165732.81908.989602677.30900-0.488004.870903.68030HepG2GEMIN5
    DDX21ENSG00000165732.82469.575403696.55740-0.581906.238904.68580HepG2GNB2L1
    DDX21ENSG00000165732.84104.521007733.33540-0.9139015.2670013.88200HepG2GPKOW
    DDX21ENSG00000165732.81663.486303696.39520-1.1519026.4675024.83950HepG2HNRNPA1
    DDX21ENSG00000165732.82162.178004111.54160-0.9272020.9722019.25160HepG2HNRNPC
    DDX21ENSG00000165732.84323.473607023.75130-0.7001013.0299011.62750HepG2HNRNPF
    DDX21ENSG00000165732.82376.042904921.51100-1.0505074.4355071.74420HepG2HNRNPL
    DDX21ENSG00000165732.83561.994307380.07020-1.0509023.4831021.93890HepG2HNRNPLL
    DDX21ENSG00000165732.82683.782004084.35960-0.6058019.0856017.60620HepG2HNRNPU
    DDX21ENSG00000165732.83630.969706916.46400-0.9297017.3396015.70230HepG2IGF2BP1
    DDX21ENSG00000165732.83309.230804172.04070-0.334309.178407.92140HepG2ILF2
    DDX21ENSG00000165732.83920.337105334.11650-0.444302.773901.45330HepG2ILF3
    DDX21ENSG00000165732.83427.943804755.70740-0.472303.456502.31920HepG2KHSRP
    DDX21ENSG00000165732.85424.958608290.04580-0.611802.251401.51010HepG2LARP4
    DDX21ENSG00000165732.83590.579705015.69120-0.482204.872304.00960HepG2MAGOH
    DDX21ENSG00000165732.86373.692905043.909100.337501.870101.34620HepG2MATR3
    DDX21ENSG00000165732.83153.924604863.97320-0.625003.958902.99510HepG2MSI2
    DDX21ENSG00000165732.83803.531407526.85240-0.9847011.362709.39480HepG2MTPAP
    DDX21ENSG00000165732.83669.332805162.83980-0.492604.773603.95500HepG2NCBP2
    DDX21ENSG00000165732.84478.414505357.24370-0.258503.230402.40870HepG2NOL12
    DDX21ENSG00000165732.84865.676406543.89020-0.427505.105704.10230HepG2NSUN2
    DDX21ENSG00000165732.84604.706904042.835100.187602.337101.55190HepG2PARN
    DDX21ENSG00000165732.85275.022004373.454500.270304.520603.77700HepG2PCBP1
    DDX21ENSG00000165732.86997.648104906.646400.512002.962701.38810HepG2PNPT1
    DDX21ENSG00000165732.82872.098803642.92500-0.343005.203704.22150HepG2PPIL4
    DDX21ENSG00000165732.83547.963904450.06430-0.326806.046905.30090HepG2PTBP1
    DDX21ENSG00000165732.83431.324405113.86160-0.575609.888608.85820HepG2PUF60
    DDX21ENSG00000165732.87982.188905428.477000.5561026.9758025.51080HepG2PUM1
    DDX21ENSG00000165732.86535.970505424.582000.268803.082302.37350HepG2PUM2
    DDX21ENSG00000165732.82038.647104311.81500-1.0807052.2653050.30060HepG2PUS1
    DDX21ENSG00000165732.87370.099203713.859600.988708.813907.60210HepG2RAVER1
    DDX21ENSG00000165732.88179.582707194.421500.185002.031601.56940HepG2RBM22
    DDX21ENSG00000165732.87190.901605284.316900.444402.920601.33590HepG2RBM47
    DDX21ENSG00000165732.83622.008804952.56840-0.4514011.3681010.41410HepG2NELFE
    DDX21ENSG00000165732.83717.314104612.50990-0.311304.119703.38700HepG2RECQL
    DDX21ENSG00000165732.85014.575907565.19210-0.593208.290207.20680HepG2RPLP0
    DDX21ENSG00000165732.82177.222003647.33210-0.744406.217504.84040HepG2RPS10
    DDX21ENSG00000165732.82816.894105493.00700-0.9635012.0090010.39470HepG2RPS3A
    DDX21ENSG00000165732.84088.054903198.236000.354002.937202.12990HepG2RRP9
    DDX21ENSG00000165732.83203.966103637.31150-0.183002.569501.94430HepG2SAFB2
    DDX21ENSG00000165732.85266.714804633.251300.184802.345301.79510HepG2SF3B4
    DDX21ENSG00000165732.84064.747404903.16420-0.270506.111405.13320HepG2SLBP
    DDX21ENSG00000165732.84684.792204241.734400.143202.151901.57300HepG2SMN1
    DDX21ENSG00000165732.86394.055808125.77000-0.345809.520008.74260HepG2SRFBP1
    DDX21ENSG00000165732.85821.323504836.046000.267405.026304.43820HepG2SRSF1
    DDX21ENSG00000165732.86267.080205049.058100.311705.130504.31920HepG2SRSF5
    DDX21ENSG00000165732.83883.582206900.34750-0.8293018.8365017.31470HepG2SRSF7
    DDX21ENSG00000165732.85806.994003934.324700.5616019.3690018.15130HepG2SRSF9
    DDX21ENSG00000165732.82546.017107054.97990-1.47040119.85760117.84500HepG2SSB
    DDX21ENSG00000165732.85068.591903470.569900.546303.445902.09400HepG2SUB1
    DDX21ENSG00000165732.87403.692805742.285900.3665010.355109.28130HepG2SUCLG1
    DDX21ENSG00000165732.82769.511004058.18310-0.551203.123002.13000HepG2SUPT6H
    DDX21ENSG00000165732.82473.185704171.39350-0.754209.197108.08360HepG2SUPV3L1
    DDX21ENSG00000165732.86832.250404346.645400.6524018.7975017.52530HepG2TAF15
    DDX21ENSG00000165732.83868.355107193.45330-0.8950019.5292017.92510HepG2TARDBP
    DDX21ENSG00000165732.83368.204305692.16140-0.757002.871901.78630HepG2TBRG4
    DDX21ENSG00000165732.81239.838803968.77340-1.6785079.8490077.85850HepG2TIAL1
    DDX21ENSG00000165732.83329.110804004.19250-0.266404.420803.74170HepG2TRIM56
    DDX21ENSG00000165732.87110.139505287.898600.427103.692202.71910HepG2UBE2L3
    DDX21ENSG00000165732.83118.187704597.28770-0.5601017.7710016.30310HepG2UPF1
    DDX21ENSG00000165732.81561.776703820.28030-1.2905017.6844015.16860HepG2UPF2
    DDX21ENSG00000165732.84122.782804725.28900-0.196802.357301.37920HepG2UTP18
    DDX21ENSG00000165732.85574.162504438.484300.328605.353604.56580HepG2UTP3
    DDX21ENSG00000165732.83559.249504920.01610-0.467103.176901.99300HepG2XPO5
    DDX21ENSG00000165732.85053.478003651.258100.468803.093101.75440HepG2XRCC5
    DDX21ENSG00000165732.86364.426204083.832200.640005.327803.88120HepG2XRCC6
    DDX21ENSG00000165732.81633.458904106.27300-1.3299030.9276028.67800HepG2XRN2
    DDX21ENSG00000165732.83240.481405099.20000-0.6541029.4719027.71840HepG2ZC3H8
    DDX21ENSG00000165732.84164.981105056.12140-0.279705.454804.75310HepG2ZNF622
    DDX21ENSG00000165732.815941.4349011299.974000.496403.594102.22990K562AARS
    DDX21ENSG00000165732.816365.5104018351.19500-0.165202.553602.00370K562AGGF1
    DDX21ENSG00000165732.816178.3259020164.50950-0.317803.442802.31880K562AKAP8
    DDX21ENSG00000165732.814752.9630019095.08300-0.372204.556703.71130K562AKAP8L
    DDX21ENSG00000165732.817408.3506021965.25050-0.335402.902502.30310K562AQR
    DDX21ENSG00000165732.816872.4962020035.02270-0.247903.573102.52290K562ATP5C1
    DDX21ENSG00000165732.811989.9358014303.05250-0.254502.722301.42400K562BCCIP
    DDX21ENSG00000165732.810585.0008013822.78170-0.385008.285006.59060K562BCLAF1
    DDX21ENSG00000165732.811825.1239017027.05620-0.526006.781205.39710K562BOP1
    DDX21ENSG00000165732.84325.706506760.28830-0.644109.797607.46100K562CCAR1
    DDX21ENSG00000165732.814062.4337021931.22810-0.6411016.1135013.36880K562CCDC124
    DDX21ENSG00000165732.812135.0406014764.71690-0.283002.647801.39850K562CIRBP
    DDX21ENSG00000165732.818884.2866028453.96060-0.591403.781902.50520K562CNOT7
    DDX21ENSG00000165732.818827.9342024263.86520-0.365907.309905.48270K562CPEB4
    DDX21ENSG00000165732.89225.6913018104.85470-0.9726033.0342030.36340K562CPSF6
    DDX21ENSG00000165732.88565.3610010486.64220-0.292004.762103.32160K562CSTF2
    DDX21ENSG00000165732.83139.6083016652.52350-2.40710116.85080112.74680K562DDX21
    DDX21ENSG00000165732.86328.245809350.69260-0.5633010.595108.41670K562DDX3X
    DDX21ENSG00000165732.831460.4024025109.316900.325207.623406.61450K562DDX47
    DDX21ENSG00000165732.88041.951009480.27790-0.237402.693501.41100K562DDX6
    DDX21ENSG00000165732.87397.0984010270.55290-0.4735013.2151010.52680K562EIF2S1
    DDX21ENSG00000165732.813228.1927020430.51890-0.627108.156807.02070K562EIF2S2
    DDX21ENSG00000165732.815027.2706011982.245400.326602.020601.33170K562EIF3G
    DDX21ENSG00000165732.86940.149408797.40330-0.342105.420503.72500K562EIF4B
    DDX21ENSG00000165732.824500.3659028804.85520-0.233502.256901.40520K562EIF4G2
    DDX21ENSG00000165732.812406.9002021891.92550-0.8193010.743708.95030K562FIP1L1
    DDX21ENSG00000165732.811036.9340018420.85610-0.7390014.2820012.25990K562FMR1
    DDX21ENSG00000165732.88772.3992015613.16170-0.8317014.8799012.60290K562FTO
    DDX21ENSG00000165732.88119.3346010592.76320-0.383605.481603.52990K562FUS
    DDX21ENSG00000165732.816895.4660010159.351300.7337029.3191027.48380K562FXR1
    DDX21ENSG00000165732.814337.6978010793.778000.409502.903202.17660K562G3BP2
    DDX21ENSG00000165732.810886.4337017285.84760-0.6671013.5001011.72970K562GPKOW
    DDX21ENSG00000165732.815275.9812027228.16220-0.833808.743207.37990K562GRSF1
    DDX21ENSG00000165732.85858.9245012370.05830-1.078109.927408.85300K562HNRNPC
    DDX21ENSG00000165732.87811.6156011044.00320-0.499603.409602.13390K562HNRNPF
    DDX21ENSG00000165732.819260.6522013759.407200.485105.783203.93060K562HNRNPK
    DDX21ENSG00000165732.817719.5100022691.39910-0.356804.710603.28850K562HNRNPL
    DDX21ENSG00000165732.823029.0739029682.35060-0.366103.159702.31250K562HSPD1
    DDX21ENSG00000165732.810498.0161013774.44980-0.391903.118402.00570K562IGF2BP2
    DDX21ENSG00000165732.89842.8047014011.16200-0.509407.478605.40190K562IGF2BP3
    DDX21ENSG00000165732.817344.6711020265.24170-0.224502.381001.62400K562KIF1C
    DDX21ENSG00000165732.810164.1341014759.52060-0.538204.714403.45660K562KRR1
    DDX21ENSG00000165732.816248.3332019398.34750-0.255602.937101.82170K562MAK16
    DDX21ENSG00000165732.811571.6175016872.84580-0.544109.715307.99710K562METAP2
    DDX21ENSG00000165732.812184.1768017715.31630-0.5400022.2424020.26510K562MTPAP
    DDX21ENSG00000165732.815602.7343019683.73440-0.3352016.9611015.32330K562NSUN2
    DDX21ENSG00000165732.812650.1179021659.87200-0.775903.369602.24500K562PABPN1
    DDX21ENSG00000165732.89727.4247016377.01620-0.7515011.7991010.08460K562PCBP3
    DDX21ENSG00000165732.88804.3324012075.11470-0.455802.715701.31180K562PHF6
    DDX21ENSG00000165732.812354.6100016517.47310-0.418904.047102.11180K562PKM
    DDX21ENSG00000165732.88424.0715012561.68740-0.5764012.2904010.65560K562POLR2G
    DDX21ENSG00000165732.816420.3271024850.07460-0.597805.504704.28380K562PPIG
    DDX21ENSG00000165732.87269.3448011090.36470-0.609404.036202.91600K562PSIP1
    DDX21ENSG00000165732.826352.8905032754.73600-0.313703.384102.32070K562PUM2
    DDX21ENSG00000165732.815568.1783018938.28040-0.282702.837502.28900K562PUS1
    DDX21ENSG00000165732.814349.5892018451.50860-0.362706.873005.96620K562RBM15
    DDX21ENSG00000165732.89388.7573011800.25550-0.329804.564702.53340K562RPS10
    DDX21ENSG00000165732.89462.5243011617.12250-0.296002.598901.63030K562RPS3
    DDX21ENSG00000165732.814351.1843011192.900200.358504.628103.22030K562SAFB
    DDX21ENSG00000165732.816790.2654025916.63500-0.626304.449502.41970K562SBDS
    DDX21ENSG00000165732.817329.5061019422.18720-0.164502.053701.34390K562SF3A3
    DDX21ENSG00000165732.813108.7576016438.84670-0.326602.607501.66400K562SF3B1
    DDX21ENSG00000165732.814920.0288024166.55470-0.695802.636301.37790K562SFPQ
    DDX21ENSG00000165732.86017.978507446.40990-0.307302.833501.55600K562SLBP
    DDX21ENSG00000165732.87021.773509589.28650-0.449602.717601.70540K562SRFBP1
    DDX21ENSG00000165732.815261.5116019898.39280-0.3828014.9884013.05670K562SRPK2
    DDX21ENSG00000165732.89230.2417011214.99150-0.281003.229702.07550K562SRSF4
    DDX21ENSG00000165732.810087.0497013022.60120-0.368504.013202.70730K562SRSF5
    DDX21ENSG00000165732.811253.3452014861.90650-0.401306.619704.80000K562SRSF7
    DDX21ENSG00000165732.814908.9232027215.03190-0.868204.066502.19210K562SUPT6H
    DDX21ENSG00000165732.87820.2015011501.84150-0.556603.444002.29720K562SUPV3L1
    DDX21ENSG00000165732.819109.9421012599.758500.6008014.4317012.55840K562SYNCRIP
    DDX21ENSG00000165732.88816.4736013956.20100-0.6626010.571409.03930K562TARDBP
    DDX21ENSG00000165732.810711.5574013462.22480-0.329704.395603.32630K562TIA1
    DDX21ENSG00000165732.85012.6688010667.47820-1.089609.551207.71890K562TIAL1
    DDX21ENSG00000165732.811004.0883013209.48170-0.263502.484601.46270K562TRA2A
    DDX21ENSG00000165732.818874.4340025615.15200-0.440603.846502.12880K562TRIP6
    DDX21ENSG00000165732.817084.4834022042.60330-0.367606.071704.15580K562TROVE2
    DDX21ENSG00000165732.88420.4754012171.70470-0.531603.931102.69470K562UCHL5
    DDX21ENSG00000165732.813634.5532020871.04720-0.6142028.9315026.91290K562UPF1
    DDX21ENSG00000165732.811746.8317017858.75100-0.6044012.5622010.64390K562WDR3
    DDX21ENSG00000165732.818136.5979026019.70460-0.520706.785204.75730K562WRN
    DDX21ENSG00000165732.816134.5049024747.07860-0.617106.785605.33850K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    92 alternative splicing events after Knockdown/Knockout DDX21 protein :

    Only display 100 entries as example. Please click "View All" button to see all 92 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SESNRNP70ENSG00000104852.10chr19+4960537049606844496046464960472849607890496079920.066000.000000.00006includedK562DDX21
    SEYWHAZENSG00000164924.13chr8-1019641561019643561019608411019611281019654961019656160.150000.000020.02623includedK562DDX21
    SETSNAXENSG00000116918.9chr1+2316992102316993752316968732316970012317002732317022700.087000.000070.06169includedK562DDX21
    SEALDOAENSG00000149925.12chr16+3007719630077248300757443007582630078554300786790.111000.000020.02623includedK562DDX21
    SESNHG6ENSG00000245910.4chr8-6783484867834960678345586783462767837671678378310.064000.000060.05822includedK562DDX21
    SEBAG6ENSG00000204463.8chr6-3160727631607423316068043160700331607975316080830.144000.000000.00888includedK562DDX21
    SESMC6ENSG00000163029.11chr2-1793426817934331179270931792721817934892179350400.177000.000080.06911includedK562DDX21
    SEOGTENSG00000147162.9chrX+7077503970775235707743627077444270775803707759440.090000.000020.02623includedK562DDX21
    SEAUHENSG00000148090.7chr9-9412265294122722941183699411843794123909941241690.270000.000050.05313includedK562DDX21
    SERP11-669N7.2ENSG00000249196.2chr12+1295959641295960601295955371295956841295976091295978380.123000.000110.08395includedK562DDX21
    SEMAGEA12ENSG00000213401.4chrX-1519021771519022601519016941519018141519031031519031840.492000.000010.01867includedK562DDX21
    SEHNRNPDLENSG00000152795.13chr4-8334671583346820833457818334603683347189833473030.172000.000000.00000includedK562DDX21
    SEMFFENSG00000168958.15chr2+2282172292282172892282114402282121002282203922282204770.315000.000000.00080includedK562DDX21
    SEOTUD6BENSG00000155100.6chr8+9208881992088959920860589208613992090583920908960.097000.000040.04420includedK562DDX21
    SESLC50A1ENSG00000169241.13chr1+1551093031551094271551087741551088521551104541551105740.184000.000090.07761includedK562DDX21
    SEPIEZO1ENSG00000103335.15chr16-8879141688791488887902788879037988791823887919270.054000.000050.05337includedK562DDX21
    SEHMGN3ENSG00000118418.10chr6-7991177279911872799109617991144379911992799121060.117000.000010.01867includedK562DDX21
    SEPABPC4ENSG00000090621.9chr1-4002950740029594400292854002941340030094400302140.161000.000000.00241includedK562DDX21
    SESDR39U1ENSG00000100445.12chr14-2491138324911466249108792491100124911551249119820.222000.000130.08947includedK562DDX21
    SESRRM1ENSG00000133226.12chr1+2497356924973699249731572497328024975349249755200.198000.000000.00018includedK562DDX21
    SEHIST1H2ACENSG00000180573.8chr6+2612792526127989261244302612486126138281261393440.074000.000130.08947includedK562DDX21
    SEBCLAF1ENSG00000029363.11chr6-1365881661365883131365824021365826151365892991365894770.099000.000020.03232includedK562DDX21
    SERPS24ENSG00000138326.14chr10+7979996179799983797969517979706279800372798004550.118000.000000.00001includedK562DDX21
    SEAC079466.1ENSG00000266976.1chr19+291018882910306129097594290980112910334529106136-0.104000.000000.00646excludedK562DDX21
    SEECDENSG00000122882.6chr10-749234907492370874920191749203097492762374927822-0.188000.000080.07421excludedK562DDX21
    SEABHD14A-ACY1ENSG00000114786.11chr3+520192225201928752018062520181745201937652019481-0.093000.000120.08829excludedK562DDX21
    SERPL7L1ENSG00000146223.10chr6+428485984284882042847376428476894285118842851352-0.103000.000120.08761excludedK562DDX21
    SETRIM59ENSG00000213186.3chr3-160166513160166583160156636160156974160167504160167617-0.245000.000120.08897excludedK562DDX21
    SEMLLT4ENSG00000130396.16chr6+168272893168273057168271062168271178168276014168276175-0.100000.000010.01336excludedK562DDX21
    SEARAP1ENSG00000186635.10chr11-724037977240383072399499723995827240436972404515-0.256000.000010.01221excludedK562DDX21
    SEBCORENSG00000183337.12chrX-399308893993094339930225399304123993160139934433-0.160000.000100.08230excludedK562DDX21
    SESZRD1ENSG00000055070.12chr1+167178691671791916693577166938031671972516719977-0.149000.000040.04303excludedK562DDX21
    SEADAMTSL4ENSG00000143382.9chr1+150523706150523906150522297150522371150524680150524784-0.102000.000100.08032excludedK562DDX21
    SEPIGTENSG00000124155.12chr20+440474914404761944045156440453344404793444048035-0.072000.000050.05387excludedK562DDX21
    SEHNRNPCENSG00000092199.13chr14-217318252173198821731469217314952173745621737565-0.058000.000050.05313excludedK562DDX21
    SEFRG1ENSG00000109536.7chr4+190876191190876306190873316190873442190878552190878657-0.111000.000060.05544excludedK562DDX21
    SEDCTN3ENSG00000137100.11chr9-346160263461611034614706346147653461788134617968-0.165000.000030.03430excludedK562DDX21
    SEACSL3ENSG00000123983.9chr2+223765391223765498223752547223752606223773450223773754-0.094000.000100.08134excludedK562DDX21
    SECD46ENSG00000117335.14chr1+207941123207941168207940357207940540207943665207943707-0.109000.000020.02623excludedK562DDX21
    SEKCTD9ENSG00000104756.11chr8-253078952530799725303644253037662531571425315796-0.156000.000040.04153excludedK562DDX21
    SEEIF4A2ENSG00000156976.10chr3+186506098186506209186505591186505671186506913186507080-0.069000.000000.00003excludedK562DDX21
    SECSNK1DENSG00000141551.10chr17-802038518020391580202269802027078020675080207372-0.209000.000000.00336excludedK562DDX21
    SEEIF3EENSG00000104408.5chr8-109254114109254142109252186109252304109260841109260994-0.078000.000020.02908excludedK562DDX21
    SEPRKDCENSG00000253729.3chr8-486947224869481548691564486916544869493848695159-0.078000.000030.03733excludedK562DDX21
    SERPL17ENSG00000265681.2chr18-470181894701820347017901470179544701864447018769-0.096000.000000.00624excludedK562DDX21
    SECHKAENSG00000110721.7chr11-678491936784931567848870678489246786448567864597-0.177000.000090.07893excludedK562DDX21
    SESTEAP3ENSG00000115107.15chr2+119988195119988610119981406119981464120003064120003564-0.229000.000040.04654excludedK562DDX21
    SESLC29A2ENSG00000174669.7chr11-661339016613403566133596661337026613493466135019-0.107000.000090.07613excludedK562DDX21
    SEIDI1ENSG00000067064.6chr10-108993810901111089240108933310948031095110-0.139000.000030.03432excludedK562DDX21
    SECRBNENSG00000113851.9chr3-321418932143303209317320947732144593214609-0.103000.000010.01867excludedK562DDX21
    SESETD5ENSG00000168137.11chr3+947853394785729477411947759094821399482382-0.079000.000090.07931excludedK562DDX21
    SEPTSENSG00000150787.3chr11+112100930112100953112099316112099396112101348112101405-0.265000.000120.08829excludedK562DDX21
    SEEEF1DENSG00000104529.13chr8-144668388144668460144663398144663498144668898144669022-0.096000.000110.08429excludedK562DDX21
    SEGNB1ENSG00000078369.13chr1-178459017847361770628177067718222581822495-0.509000.000000.00474excludedK562DDX21
    RISRSF5ENSG00000100650.11chr14+7023589870237257702358987023596870237183702372570.137000.000000.00016includedK562DDX21
    RIUCKL1ENSG00000198276.9chr20-6257715762577620625771576257732862577513625776200.172000.000000.00366includedK562DDX21
    RIC1orf131ENSG00000143633.8chr1-2313595082313612692313595082313601602313612162313612690.068000.000240.07723includedK562DDX21
    RIPFKLENSG00000141959.12chr21+4573923345741758457392334574003045741611457417580.061000.000090.03404includedK562DDX21
    RIUSP16ENSG00000156256.10chr21+3041479230415920304147923041484930415743304159200.081000.000140.04862includedK562DDX21
    RIRHOT2ENSG00000140983.9chr16+7195527201757195527196067201227201750.071000.000300.08401includedK562DDX21
    RISRRM1ENSG00000133226.12chr1+2497315724975520249731572497328024975349249755200.221000.000000.00002includedK562DDX21
    RITIAL1ENSG00000151923.13chr10-1213361221213367151213361221213362621213365911213367150.144000.000010.00440includedK562DDX21
    RISRSF7ENSG00000115875.14chr2-3897572038976847389757203897579538976670389768470.059000.000090.03404includedK562DDX21
    RIQTRT1ENSG00000213339.4chr19+108126251081293010812625108126941081279110812930-0.150000.000010.00658excludedK562DDX21
    RIRPS9ENSG00000170889.9chr19+547104205471151554710420547105925471126554711515-0.127000.000040.01820excludedK562DDX21
    RIRPL10AENSG00000198755.6chr6+354367233543730635436723354370623543715735437306-0.156000.000010.00440excludedK562DDX21
    MXEAC079466.1ENSG00000266976.1chr19+29101875291020972910287929102968291011662910123829103345291061360.188000.000040.026051includedK562DDX21
    MXEAC079466.1ENSG00000266976.1chr19+29101875291020972910289229102968291011662910123829103345291061360.194000.000030.022491includedK562DDX21
    MXEABHD14A-ACY1ENSG00000114786.11chr3+52018062520181745201922252019287520122745201239052019376520194810.081000.000220.073731includedK562DDX21
    MXETNNT1ENSG00000105048.12chr19-55653224556532885565691155656933556525535565267055657801556578340.100000.000240.076301includedK562DDX21
    MXENUP54ENSG00000138750.10chr4-77055327770555157705733877057565770536757705387277065301770654450.167000.000020.019741includedK562DDX21
    MXEACADVLENSG00000072778.15chr17+712344071235167123922712399571232267123365712408471241490.100000.000120.048011includedK562DDX21
    MXEADAMTSL4ENSG00000143382.9chr1+1505222271505223711505237981505239061505218831505219751505246801505247840.153000.000210.073101includedK562DDX21
    MXEGALNT7ENSG00000109586.7chr4+1742189451742191281742192651742194481742169141742169941742231971742233150.257000.000290.089101includedK562DDX21
    MXEHMG20BENSG00000064961.14chr19+357438035745843575537357565835736893573798357625835763050.102000.000050.030401includedK562DDX21
    MXERPL10AENSG00000198755.6chr6+35436575354368043543715735437306354361963543621635437955354381280.094000.000030.022011includedK562DDX21
    MXEC2CD2ENSG00000157617.12chr21-4332710043327275433277684332789343325832433259464332956743329632-0.411000.000090.044752includedK562DDX21
    MXEEGFL7ENSG00000172889.11chr9+139565401139565466139566377139566540139564620139564782139566715139567130-0.116000.000100.048012includedK562DDX21
    MXETCF3ENSG00000071564.10chr19-16122051612432161528316155191609292161184816156841615820-0.115000.000110.048012includedK562DDX21
    MXENFIXENSG00000008441.12chr19+1318634813186485131894261318954913184719131848401319249313192669-0.239000.000180.066412includedK562DDX21
    MXESUGP2ENSG00000064607.12chr19-1911497619115455191191251911922619112421191124831912066319121151-0.067000.000080.040902includedK562DDX21
    MXESMPD4ENSG00000136699.15chr2-130914823130914969130921946130922018130914157130914248130925030130925163-0.158000.000000.005162includedK562DDX21
    MXEDAZAP1ENSG00000071626.12chr19+14223461422395142884014289941421146142125714299651429995-0.083000.000000.002022includedK562DDX21
    MXEMFFENSG00000168958.15chr2+228212058228212100228217229228217289228205007228205096228220392228220477-0.205000.000350.099962includedK562DDX21
    MXEMFFENSG00000168958.15chr2+228211941228212100228217229228217289228207460228207535228220392228220477-0.322000.000000.001112includedK562DDX21
    MXECD46ENSG00000117335.14chr1+207941123207941168207943665207943707207940357207940540207956636207956675-0.113000.000120.048012includedK562DDX21
    MXEMED15ENSG00000099917.13chr22+2092939920929519209368972093703420922807209229182093712620937254-0.115000.000020.022012includedK562DDX21
    MXEMED15ENSG00000099917.13chr22+2092939920929519209369452093703420922807209229182093712620937254-0.134000.000030.022012includedK562DDX21
    MXEMED15ENSG00000099917.13chr22+2092939920929519209369482093703420922807209229182093712620937254-0.133000.000030.022012includedK562DDX21
    MXEMED15ENSG00000099917.13chr22+2092939920929519209369842093703420922807209229182093712620937254-0.130000.000190.066732includedK562DDX21
    MXEEEF1DENSG00000104529.13chr8-144663223144663324144668388144668460144662789144662897144668898144669734-0.092000.000120.048012includedK562DDX21
    MXEEEF1DENSG00000104529.13chr8-144663398144663498144668388144668460144663223144663324144668898144669022-0.139000.000000.005392includedK562DDX21





    12 RBPs can affect the splicing of DDX21 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEDDX21ENSG00000165732.8chr10+707316467073180870729956707301067073330070733420-0.140000.000000.00000excludedK562AKAP8L
    SEDDX21ENSG00000165732.8chr10+707343567073449970733300707334207073728470737485-0.059000.000000.00001excludedK562AQR
    SEDDX21ENSG00000165732.8chr10+707412187074133770738621707387327074229870744829-0.058000.000000.00000excludedK562AQR
    SEDDX21ENSG00000165732.8chr10+707217987072191370719561707200057072304670723225-0.060000.000000.00000excludedK562AQR
    SEDDX21ENSG00000165732.8chr10+707316467073180870729956707301067073330070733420-0.239000.000000.00000excludedK562PUS1
    SEDDX21ENSG00000165732.8chr10+707316467073180870729956707301067073330070733420-0.052000.000100.00335excludedK562U2AF1
    SEDDX21ENSG00000165732.8chr10+707316467073180870729956707301067073330070733420-0.129000.000000.00000excludedK562UTP18
    SEDDX21ENSG00000165732.8chr10+707316467073180870729956707301067073330070733420-0.051000.000170.00464excludedK562U2AF2
    SEDDX21ENSG00000165732.8chr10+707316467073180870729956707301067073330070733420-0.140000.000000.00000excludedK562RBM15
    SEDDX21ENSG00000165732.8chr10+707316467073180870729956707301067073330070733420-0.162000.000000.00000excludedK562AGGF1
    SEDDX21ENSG00000165732.8chr10+707316467073180870729956707301067073330070733420-0.082000.000000.00011excludedK562PABPC4
    MXEDDX21ENSG00000165732.8chr10+70733300707334207073859770738732707299567073010670741292707413370.121000.000000.000001includedK562AGGF1
    MXEDDX21ENSG00000165732.8chr10+70738597707387327074129270741337707344257073449970742298707448290.056000.000000.000001includedK562AQR
    MXEDDX21ENSG00000165732.8chr10+70738562707387327074121870741337707299567073010670742298707448290.058000.000000.000001includedK562AQR
    MXEDDX21ENSG00000165732.8chr10+7073728470737444707385627073873270734425707344997074229870744829-0.097000.000000.000002includedK562AQR
    MXEDDX21ENSG00000165732.8chr10+7072995670730106707316467073180870728731707288777073330070733420-0.124000.001010.054432includedHepG2XPO5
    MXEDDX21ENSG00000165732.8chr10+7072183770721913707251327072525070719561707200057072677370726959-0.183000.000000.000072includedHepG2SFPQ
    MXEDDX21ENSG00000165732.8chr10+70734425707344997073728470737444707333007073342070738597707387320.155000.000480.015241includedK562HNRNPUL1
    MXEDDX21ENSG00000165732.8chr10+70733300707334207073442570734499707299567073010670737284707374440.260000.000000.000001includedK562HNRNPUL1
    MXEDDX21ENSG00000165732.8chr10+7072995670730106707333007073342070728731707288777073442570734499-0.158000.000070.003632includedK562HNRNPUL1

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    No autoregularoty alternative splicing events between protein DDX21 and its RNA.