ST3GAL1

General Information

Gene Name       : ST3GAL1
Gene ID             : ENSG00000008513.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ST3GAL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ST3GAL1ENSG00000008513.1511.9815.4213.70ENCSR000AEF
HepG2ST3GAL1ENSG00000008513.1530.0629.3829.72ENCSR985KAT
K562ST3GAL1ENSG00000008513.153.514.814.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ST3GAL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ST3GAL1 RNA is bound by 12 proteins.  







eCLIP assay for ST3GAL1 is not avaliable on ENCORE database.





12 proteins are bound to ST3GAL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8134471863134471965-3'-UTR,intron-Distal3.9518513.06995HepG2UPF1
chr8134467191134467273-3'-UTR,intron-Distal3.452144.27354HepG2UPF1
chr8134471739134471801-3'-UTR,intron-Distal4.328034.49605HepG2UPF1
chr8134471883134472003-3'-UTR,intron-Distal3.739536.67001HepG2RBM15
chr8134468514134468592-3'-UTR,intron-Distal4.390645.09917HepG2LIN28B
chr8134471867134471950-3'-UTR,intron-Distal4.390104.92727HepG2AKAP1
chr8134467427134467598-3'-UTR,intron-Distal4.590836.37885HepG2IGF2BP1
chr8134471216134471295-3'-UTR,intron-Distal4.060015.36498HepG2UPF1
chr8134468184134468265-3'-UTR,intron-Distal4.252894.07810K562UPF1
chr8134583993134584172-5'-UTR,intron-Distal,intron-Proximal3.131894.47655HepG2NCBP2
chr8134476973134477039-CDS,intron-Distal,intron-Proximal3.1715811.16708HepG2PRPF8
chr8134531288134531385-intron-Distal4.282378.48623HepG2PCBP2
chr8134583322134583434-intron-Distal4.533845.15063HepG2CSTF2T
chr8134476728134476809-intron-Distal5.5079310.04496HepG2QKI
chr8134537273134537333-intron-Distal4.914145.24754K562LSM11
chr8134537250134537345-intron-Distal4.340554.50258HepG2LSM11
chr8134476894134477021-intron-Distal,intron-Proximal3.812114.49024K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ST3GAL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ST3GAL1 is not available on ENCORE database.

  • 138 RBPs can affect the levels of ST3GAL1.  








The Knockdown/knockout RNA-Seq assay for ST3GAL1 is not available on ENCORE database.





138 RBPs can affect the gene expression of ST3GAL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ST3GAL1ENSG00000008513.10766.041401308.85520-0.7728010.864408.93100HepG2AATF
ST3GAL1ENSG00000008513.10854.360801213.42810-0.506208.544907.59650HepG2ACO1
ST3GAL1ENSG00000008513.101597.678101015.150100.654207.745206.18270HepG2ADAR
ST3GAL1ENSG00000008513.10446.959503158.80260-2.8212090.8123088.51320HepG2AKAP1
ST3GAL1ENSG00000008513.101026.766401802.20780-0.811709.780307.96020HepG2AKAP8
ST3GAL1ENSG00000008513.10984.617901219.08060-0.308203.325302.49410HepG2AKAP8L
ST3GAL1ENSG00000008513.101402.337201844.49760-0.395405.980005.03280HepG2AUH
ST3GAL1ENSG00000008513.10473.79830937.92370-0.9852010.957809.03620HepG2BCCIP
ST3GAL1ENSG00000008513.10583.67720925.52000-0.665107.018606.11520HepG2BOP1
ST3GAL1ENSG00000008513.101022.963301299.24560-0.344903.117702.30280HepG2CALR
ST3GAL1ENSG00000008513.101070.820601720.48220-0.684105.923104.47010HepG2CCAR1
ST3GAL1ENSG00000008513.103518.926402483.094200.502905.431504.36850HepG2CIRBP
ST3GAL1ENSG00000008513.101036.170801213.10600-0.227402.351501.73020HepG2CKAP4
ST3GAL1ENSG00000008513.10629.040301266.40850-1.009508.752707.41880HepG2CNOT7
ST3GAL1ENSG00000008513.101069.007301348.94680-0.335603.116801.94380HepG2CPSF7
ST3GAL1ENSG00000008513.10923.410101340.04600-0.537203.658302.00970HepG2CSTF2T
ST3GAL1ENSG00000008513.101073.205201522.56000-0.504607.769106.79410HepG2CELF1
ST3GAL1ENSG00000008513.101448.325501122.220300.367904.404003.38160HepG2DDX19B
ST3GAL1ENSG00000008513.101100.658501444.22730-0.391903.551602.79080HepG2DDX21
ST3GAL1ENSG00000008513.102155.264001413.152300.608809.546107.88340HepG2DDX24
ST3GAL1ENSG00000008513.10451.68740698.48600-0.628905.058903.23440HepG2DDX28
ST3GAL1ENSG00000008513.10888.124303025.73150-1.7685047.0775044.79900HepG2DDX3X
ST3GAL1ENSG00000008513.10772.132201164.97600-0.593407.278305.23620HepG2DDX52
ST3GAL1ENSG00000008513.101505.67890964.863400.641903.468602.37650HepG2DDX59
ST3GAL1ENSG00000008513.101853.468002599.54840-0.488004.093203.35330HepG2DDX6
ST3GAL1ENSG00000008513.102536.879201160.906801.1277045.8660043.97780HepG2DKC1
ST3GAL1ENSG00000008513.10855.155901022.19800-0.257402.060001.44340HepG2DNAJC21
ST3GAL1ENSG00000008513.10689.469101013.19230-0.555409.766708.63120HepG2DNAJC2
ST3GAL1ENSG00000008513.10775.268301158.58040-0.579605.620204.03470HepG2EFTUD2
ST3GAL1ENSG00000008513.10962.698502498.62930-1.3760029.1471027.36210HepG2EIF2S1
ST3GAL1ENSG00000008513.10999.513901242.64820-0.314102.713701.55760HepG2EIF2S2
ST3GAL1ENSG00000008513.10762.771201128.21420-0.564704.640703.49310HepG2EIF3D
ST3GAL1ENSG00000008513.101515.110802761.09550-0.8658011.169509.91400HepG2EIF4A3
ST3GAL1ENSG00000008513.10982.008302688.66450-1.4531022.6384020.81590HepG2EIF4B
ST3GAL1ENSG00000008513.102119.802701419.106300.578806.592904.99360HepG2ESF1
ST3GAL1ENSG00000008513.101190.165602117.66200-0.8313024.8532023.36270HepG2ETF1
ST3GAL1ENSG00000008513.10565.372901008.44450-0.8349013.5419011.01840HepG2FAM120A
ST3GAL1ENSG00000008513.101053.795301376.22620-0.385103.602202.32240HepG2FASTKD2
ST3GAL1ENSG00000008513.101094.480401654.41630-0.596105.455604.40710HepG2FIP1L1
ST3GAL1ENSG00000008513.10754.097201609.60860-1.0939012.1454010.04260HepG2FUS
ST3GAL1ENSG00000008513.101076.407002786.38530-1.3722030.7586028.76500HepG2FXR1
ST3GAL1ENSG00000008513.101203.028002584.48860-1.1032018.5520016.90460HepG2G3BP1
ST3GAL1ENSG00000008513.10707.786201167.33850-0.721807.959606.22580HepG2GNB2L1
ST3GAL1ENSG00000008513.101805.19120963.136700.9062011.8910010.64360HepG2GPKOW
ST3GAL1ENSG00000008513.10654.956701172.41920-0.840006.932105.17880HepG2GRSF1
ST3GAL1ENSG00000008513.10861.937301517.24960-0.815806.480104.27160HepG2GTF2F1
ST3GAL1ENSG00000008513.101562.381901031.991100.598207.461206.47680HepG2HNRNPA1
ST3GAL1ENSG00000008513.10738.718101046.16030-0.502003.257601.73660HepG2HNRNPAB
ST3GAL1ENSG00000008513.10640.973501147.90620-0.8407011.4660010.13620HepG2HNRNPC
ST3GAL1ENSG00000008513.101582.52180938.155800.7542017.2280015.63560HepG2HNRNPF
ST3GAL1ENSG00000008513.101185.577102617.71140-1.1427024.7931022.91180HepG2HNRNPK
ST3GAL1ENSG00000008513.101051.587901491.15960-0.5039010.067708.85720HepG2HNRNPL
ST3GAL1ENSG00000008513.10662.579101141.24510-0.7844012.1307010.38850HepG2HNRNPM
ST3GAL1ENSG00000008513.10833.323001140.31640-0.452506.577705.67750HepG2HNRNPU
ST3GAL1ENSG00000008513.101969.49090923.807901.092107.963906.79400HepG2IGF2BP1
ST3GAL1ENSG00000008513.101278.557302626.97220-1.0389018.3551016.79490HepG2IGF2BP2
ST3GAL1ENSG00000008513.10794.817902465.71890-1.6333011.090509.23970HepG2IGF2BP3
ST3GAL1ENSG00000008513.101497.665301164.794300.362506.112905.06590HepG2ILF2
ST3GAL1ENSG00000008513.101483.951302642.47970-0.832408.941007.04500HepG2KHSRP
ST3GAL1ENSG00000008513.101361.464401109.189100.295603.939502.72660HepG2KIF1C
ST3GAL1ENSG00000008513.10741.465101143.68920-0.625207.144505.36930HepG2LARP7
ST3GAL1ENSG00000008513.10802.638601200.80400-0.581206.179804.39710HepG2LIN28B
ST3GAL1ENSG00000008513.101381.209502787.36060-1.0130016.9477015.39520HepG2MAGOH
ST3GAL1ENSG00000008513.10830.571202802.87070-1.7547040.9663038.77270HepG2MATR3
ST3GAL1ENSG00000008513.10714.902801180.74170-0.723904.933303.55200HepG2METAP2
ST3GAL1ENSG00000008513.10874.528201338.60940-0.614208.272106.94080HepG2MSI2
ST3GAL1ENSG00000008513.101009.926002868.82060-1.5062033.8176031.81130HepG2NCBP2
ST3GAL1ENSG00000008513.10794.916701034.11590-0.379502.890001.44070HepG2NIP7
ST3GAL1ENSG00000008513.101152.017901623.26500-0.494706.810305.62030HepG2NOL12
ST3GAL1ENSG00000008513.102331.05180815.015001.5160040.1247037.83410HepG2NSUN2
ST3GAL1ENSG00000008513.101172.111602554.53420-1.1240020.0371018.14060HepG2PABPC4
ST3GAL1ENSG00000008513.10793.092001128.70950-0.509107.443606.16480HepG2PARN
ST3GAL1ENSG00000008513.101758.490202546.41360-0.5341012.6368011.48960HepG2PCBP1
ST3GAL1ENSG00000008513.10845.605601017.07000-0.266402.190701.52700HepG2PPIL4
ST3GAL1ENSG00000008513.101597.339001361.824900.230002.283301.57250HepG2PRPF4
ST3GAL1ENSG00000008513.10458.41620711.22040-0.633605.221904.14770HepG2PRPF8
ST3GAL1ENSG00000008513.10975.905702591.00930-1.4087069.2480067.38370HepG2PTBP1
ST3GAL1ENSG00000008513.102338.172301549.579600.593404.185703.47020HepG2PUF60
ST3GAL1ENSG00000008513.101055.244901644.98370-0.6405016.4159015.21830HepG2PUM1
ST3GAL1ENSG00000008513.10888.239201643.75940-0.8880018.1910016.56810HepG2PUM2
ST3GAL1ENSG00000008513.10909.966401235.94670-0.441706.785905.89450HepG2PUS1
ST3GAL1ENSG00000008513.101244.165102806.25860-1.1735040.6057038.71920HepG2QKI
ST3GAL1ENSG00000008513.101407.761701769.98780-0.330303.525302.95990HepG2RBM22
ST3GAL1ENSG00000008513.10704.803802546.81030-1.8534071.7568068.80520HepG2RBM25
ST3GAL1ENSG00000008513.101382.964502883.59590-1.0601043.5466041.97670HepG2NELFE
ST3GAL1ENSG00000008513.101325.931801010.739900.391502.949102.24700HepG2RPLP0
ST3GAL1ENSG00000008513.10435.163101097.85640-1.3351028.7479027.11740HepG2RPS19
ST3GAL1ENSG00000008513.10520.986901271.89310-1.2877023.7877021.65310HepG2RPS2
ST3GAL1ENSG00000008513.10515.10780703.52560-0.449702.759301.97300HepG2RRP9
ST3GAL1ENSG00000008513.10814.721401197.93460-0.556204.003802.44140HepG2SART3
ST3GAL1ENSG00000008513.10809.049801101.78400-0.445503.478302.42040HepG2SERBP1
ST3GAL1ENSG00000008513.10801.007801899.03820-1.2454017.1639015.41410HepG2SF3A3
ST3GAL1ENSG00000008513.101148.401202697.68580-1.2321055.9819054.00680HepG2SF3B4
ST3GAL1ENSG00000008513.102321.544701485.880200.6437020.6618019.08820HepG2SLBP
ST3GAL1ENSG00000008513.10769.696201184.23570-0.6216013.0234011.78800HepG2SMN1
ST3GAL1ENSG00000008513.10906.101401500.16100-0.727406.138304.66940HepG2SMNDC1
ST3GAL1ENSG00000008513.10689.149501012.26500-0.554702.994302.18030HepG2SNRNP70
ST3GAL1ENSG00000008513.101465.158301999.16110-0.448308.704107.95190HepG2SRFBP1
ST3GAL1ENSG00000008513.101367.07660878.292800.638205.493103.34450HepG2SRP68
ST3GAL1ENSG00000008513.101399.574802815.75470-1.0085042.6824041.31200HepG2SRSF1
ST3GAL1ENSG00000008513.10851.264501530.02790-0.8459021.1291019.61720HepG2SRSF5
ST3GAL1ENSG00000008513.101171.85040921.733900.346303.559202.78410HepG2SRSF7
ST3GAL1ENSG00000008513.101842.504502290.72760-0.314105.040704.33690HepG2SRSF9
ST3GAL1ENSG00000008513.103296.534601735.789000.9253040.0073038.59680HepG2SSB
ST3GAL1ENSG00000008513.10549.803101104.70420-1.0067010.222708.04260HepG2STAU1
ST3GAL1ENSG00000008513.10610.286401106.79270-0.858808.292706.27800HepG2STIP1
ST3GAL1ENSG00000008513.10943.796301740.02580-0.8826027.8051026.16810HepG2SUCLG1
ST3GAL1ENSG00000008513.102070.237502530.78490-0.289803.710503.07720HepG2TAF15
ST3GAL1ENSG00000008513.101135.16090895.952200.341302.372301.69340HepG2TARDBP
ST3GAL1ENSG00000008513.10460.01590615.26310-0.419502.814901.81020HepG2TFIP11
ST3GAL1ENSG00000008513.101628.797902325.57950-0.513807.651706.27650HepG2TIA1
ST3GAL1ENSG00000008513.10833.897801108.00480-0.410004.027303.44770HepG2TIAL1
ST3GAL1ENSG00000008513.101112.816101513.93320-0.444104.679503.50990HepG2TUFM
ST3GAL1ENSG00000008513.101149.018401415.03660-0.300402.132701.57380HepG2U2AF1
ST3GAL1ENSG00000008513.101024.258501602.51360-0.645805.709604.47910HepG2UBE2L3
ST3GAL1ENSG00000008513.10320.49580542.24750-0.758606.627405.43990HepG2UCHL5
ST3GAL1ENSG00000008513.101139.935001684.15930-0.5631012.0956010.82310HepG2UPF1
ST3GAL1ENSG00000008513.10521.98860840.45310-0.687104.725003.39580HepG2UPF2
ST3GAL1ENSG00000008513.10815.231901625.98550-0.9960030.3515028.68660HepG2UTP3
ST3GAL1ENSG00000008513.10607.982801616.98440-1.4112019.1728016.72720HepG2XRCC6
ST3GAL1ENSG00000008513.101463.80060903.662300.695806.948705.81230HepG2XRN2
ST3GAL1ENSG00000008513.101161.466501343.96160-0.210502.150901.54740HepG2ZC3H8
ST3GAL1ENSG00000008513.101288.972101852.24900-0.5231013.0115012.04720HepG2ZNF622
ST3GAL1ENSG00000008513.10206.54020311.30120-0.591903.229901.88990K562APOBEC3C
ST3GAL1ENSG00000008513.10581.00090278.108801.062807.032805.28340K562CNOT7
ST3GAL1ENSG00000008513.10354.56010215.298600.719604.996503.94830K562CPSF6
ST3GAL1ENSG00000008513.1091.99900179.83150-0.967003.959402.34640K562DDX27
ST3GAL1ENSG00000008513.10159.25300311.80570-0.969308.960907.87090K562DDX47
ST3GAL1ENSG00000008513.10610.07250224.608001.4415026.8092024.96560K562EIF2S2
ST3GAL1ENSG00000008513.1058.15310116.84420-1.006702.417601.48330K562EIF3A
ST3GAL1ENSG00000008513.1092.89190198.19400-1.093305.896704.30440K562EIF3D
ST3GAL1ENSG00000008513.10103.46170160.42040-0.632802.567101.79990K562EIF3G
ST3GAL1ENSG00000008513.10260.05700169.125700.620603.522402.07070K562EXOSC5
ST3GAL1ENSG00000008513.10157.08790230.26230-0.551702.387601.60010K562FIP1L1
ST3GAL1ENSG00000008513.10540.10580219.050701.3019014.1829012.17530K562FMR1
ST3GAL1ENSG00000008513.10297.17630185.660700.678603.696702.62590K562FTO
ST3GAL1ENSG00000008513.10168.69780228.10210-0.435201.872001.35500K562FXR1
ST3GAL1ENSG00000008513.10410.20820205.561500.996708.889107.45660K562GPKOW
ST3GAL1ENSG00000008513.10188.15300299.32300-0.669803.607702.74910K562GRSF1
ST3GAL1ENSG00000008513.10132.45500201.49790-0.605302.473801.90560K562HNRNPC
ST3GAL1ENSG00000008513.1065.20620189.41170-1.538408.899207.05330K562HNRNPM
ST3GAL1ENSG00000008513.10204.12670312.16190-0.612803.258102.39580K562HSPD1
ST3GAL1ENSG00000008513.10161.46180249.02360-0.625102.751201.72790K562IGF2BP2
ST3GAL1ENSG00000008513.10339.13700175.512500.950205.618004.22650K562KRR1
ST3GAL1ENSG00000008513.10164.16490261.01420-0.669003.994502.87140K562MATR3
ST3GAL1ENSG00000008513.10144.88650256.62020-0.824705.509704.39230K562MTPAP
ST3GAL1ENSG00000008513.10444.57780267.182200.734503.908202.41930K562PABPC1
ST3GAL1ENSG00000008513.10122.68280180.17970-0.554501.944801.30930K562PRPF8
ST3GAL1ENSG00000008513.10625.89370401.163400.641605.988104.55770K562PUM2
ST3GAL1ENSG00000008513.1079.67030183.49540-1.203606.213804.98240K562RPS19
ST3GAL1ENSG00000008513.10178.91530249.15830-0.477802.135701.50500K562SRSF1
ST3GAL1ENSG00000008513.10110.91160163.89130-0.563302.153501.44520K562U2AF2
ST3GAL1ENSG00000008513.10653.91400434.089100.591004.839602.99210K562UBE2L3
ST3GAL1ENSG00000008513.10479.09400302.329400.664106.449405.40530K562UPF1
ST3GAL1ENSG00000008513.10402.35490214.551300.907006.671004.83850K562UTP3
ST3GAL1ENSG00000008513.10164.18830269.00990-0.712304.487003.42760K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ST3GAL1 is not available on ENCORE database.





5 RBPs can affect the splicing of ST3GAL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSST3GAL1ENSG00000008513.10chr8-1344771731344773361344771731344772001344781361344783330.100000.001020.06929longerHepG2SF3B4
RIST3GAL1ENSG00000008513.10chr8-1344879611344888431344879611344883171344885201344888430.214000.001120.05199includedHepG2SFPQ
RIST3GAL1ENSG00000008513.10chr8-134487961134488843134487961134488317134488520134488843-0.259000.000530.01519excludedHepG2SRSF1
RIST3GAL1ENSG00000008513.10chr8-134487961134488843134487961134488317134488520134488843-0.298000.000070.00113excludedHepG2U2AF1
RIST3GAL1ENSG00000008513.10chr8-134487961134488843134487961134488317134488520134488843-0.254000.004260.03966excludedHepG2RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ST3GAL1 is not avaliable on ENCORE database.