LIN28B

General Information

Gene Name       : LIN28B
Gene ID             : ENSG00000187772.7
Essential Gene : No

Functions

Localization(RBPImage: LIN28B)

Domains (AlphaFold: LIN28B)


Antibody Validation

 View validation images for all LIN28B antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LIN28BENSG00000187772.70.000.010.01ENCSR000AEF
HepG2LIN28BENSG00000187772.718.2334.1726.20ENCSR985KAT
K562LIN28BENSG00000187772.732.5437.9535.25ENCSR000AEO

Assays

5 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 325ENCSR970NKPLIN28BK562ReleasedENCAB006PLVENCSR399CBP  
eCLIPeCLIP: 387ENCSR861GYELIN28BHepG2ReleasedENCAB006PLVENCSR746ZSV  
knockdown followed by RNA-seq LIN28B-BGKLV21-K562ENCSR598YQXLIN28BK562ReleasedENCSR572FFX   shRNAKD% = 79.9,79.4
knockdown followed by RNA-seq LIN28B-BGHLV18-HepG2ENCSR927SLPLIN28BHepG2ReleasedENCSR674KEK   shRNAKD% = 79.3,74.6
RNA Bind-n-SeqRBNS: LIN28BENCSR369RLALIN28Bcell-free sampleReleased






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
LIN28B325K562ENCSR970NKPENCSR399CBPENCAB006PLVA303-558A1ReleasedENCODE3
LIN28B387HepG2ENCSR861GYEENCSR746ZSVENCAB006PLVA303-588A1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
LIN28BENCAB006PLVA303-588A1Released, ENCODE3Released, ENCODE3BGHLV18-21, Released, ENCODE3BGKLV21-27, Released, ENCODE3
LIN28B1965S1Released, ENCODE3BGHLV18-21, Released, ENCODE3BGKLV21-27, Submitted, ENCORE2
LIN28B11965S1Released, ENCODE3Submitted, ENCORE2BGHLV18-21, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
LIN28BK562shRNAENCSR598YQXENCSR572FFXLIN28B_BGKLV21_27_17573,LIN28B_BGKLV21_28_17574non-target_BGKLV21_1,non-target_BGKLV21_279.9,79.4ReleasedENCODE3
LIN28BHepG2shRNAENCSR927SLPENCSR674KEKLIN28B_BGHLV18_21,LIN28B_BGHLV18_22NT_BGHLV18_1,NT_BGHLV18_279.3,74.6ReleasedENCODE3
LIN28BRibo-STAMP-293TshRNABGRSLV01-9,BGRSLV01-10BGRSLV01-1,BGRSLV01-2NotSatisfiedENCORE2
LIN28BRibo-STAMP-293TshRNABGRSLV02-5,BGRSLV02-6BGRSLV02-1,BGRSLV02-2NotSatisfiedENCORE2
LIN28BRibo-STAMP-293TshRNABGRSLV09-23,BGRSLV09-24BGRSLV09-1,BGRSLV09-2NotSatisfiedENCORE2
LIN28BRibo-STAMP-293TshRNABGRSLV09-25,BGRSLV09-26BGRSLV09-1,BGRSLV09-2NotSatisfiedENCORE2
LIN28BRibo-STAMP-293TshRNABGRSDLV02-41,BGRSDLV02-42BGRSDLV02-1,BGRSDLV02-2SubmittedENCORE2
LIN28BRibo-STAMP-293TshRNALIN28B-BGRSDLV02-43dox,LIN28B-BGRSDLV02-44doxLIN28B-BGRSDLV02-41,LIN28B-BGRSDLV02-42,SubmittedENCORE2


  RNA Bind-n-Seqn  
  GeneName    gene_aliases    Status    Project    Note  
LIN28BLIN28BReleasedENCODE4


  Localization Image in HepG2  
    LIN28B: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Nucleolus
  • Cytoplasm
  • Cytosolic












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    LIN28BProduct_ID: A303-588A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: LIN28B-human    		 HepG2_Bethyl_A303-588A_1_LIN28B.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using LIN28B specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-LIN28B antibody (lanes under 'LIN28B').
    		 LIN28B_Secondary_Western.png<br>Caption: Western blot following shRNA against LIN28B in K562 and HepG2 whole cell lysate using LIN28B specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against LIN28B. Lanes 5-8 follow the same pattern, but in HepG2. LIN28B protein appears as the green band, Tubulin serves as a control and appears in red.
    		 K562_Bethyl_A303-588A_1_LIN28B.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using LIN28B specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-LIN28B antibody (lanes under 'LIN28B').
    		 LIN28B_Secondary_Western.png<br>Caption: Western blot following shRNA against LIN28B in K562 and HepG2 whole cell lysate using LIN28B specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against LIN28B. Lanes 5-8 follow the same pattern, but in HepG2. LIN28B protein appears as the green band, Tubulin serves as a control and appears in red.
    LIN28BProduct_ID: 11965S
    Lot_ID: 1
    Source: Cell Signaling Technology
    Target Name: LIN28B-human    		 CST_11965S_1_LIN28B.png<br>Caption: IP-WB analysis of 11965S whole cell lysate using the LIN28B specific antibody, 11965S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the LIN28B-specific antibody, 11965S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    LIN28BProduct_ID: 1965S
    Lot_ID: 1
    Source: Cell Signaling
    Target Name: LIN28B-human    		 lin28b-K562-CRISPR-11965S.png<br>Caption: Western blot following shRNA against LIN28B in K562 whole cell lysate using LIN28B specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNA against LIN28B. LIN28B protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








    RNA Targets
    • LIN28B protein binds to 10,548 RNA regions.  




    • The binding motifs of LIN28B

      • Trulli

    Proteins bound to RNA
    • LIN28B RNA is bound by 15 proteins.  






    LIN28B protein has 10,548 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 10,548 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    LIN28Bchr3128994046128994098+3.567319.25119K562COPG13'-UTR,CDS
    LIN28Bchr125463130754631340-3.3592812.75284K562CBX53'-UTR,intron-Distal
    LIN28Bchr3122811218122811293+3.178036.70023HepG2PDIA53'-UTR,CDS,intron-Proximal
    LIN28Bchr1204375333204375423-3.778706.65749K562PPP1R15BCDS,intron-Distal
    LIN28Bchr115099591510011-3.445676.31840K562SSU725'-UTR,intron-Distal,intron-Proximal
    LIN28Bchr2135891506135891560+3.632766.01926K562RAB3GAP1CDS
    LIN28Bchr158127167881271747-4.064603.72865HepG2MESDC2CDS,intron-Distal
    LIN28Bchr3186300504186300563+3.736027.28924HepG2DNAJB11CDS,intron-Proximal
    LIN28Bchr84880293148802968-4.395934.55369K562PRKDCCDS,intron-Distal
    LIN28Bchr47169804771698170-4.733604.34615K562GRSF1CDS,intron-Distal,intron-Proximal
    LIN28Bchr119554609895546154+3.874305.16005K562CEP573'-UTR,CDS,intron-Proximal
    LIN28Bchr7107593973107594011-3.606768.28461HepG2LAMB1CDS,intron-Distal,intron-Proximal
    LIN28Bchr1130621303062214-4.119668.17198K562CARS3'-UTR,5'-UTR,CDS,intron-Distal
    LIN28Bchr176182328761823321-5.0271414.70754HepG2CCDC47, RP11-51F16.83'-UTR,intron-Distal
    LIN28Bchr174748161947481678-3.8295111.07283HepG2PHB3'-UTR,intron-Distal
    LIN28Bchr1194596269459655+3.996755.79114K562IPO7CDS,intron-Proximal
    LIN28Bchr1109856165109856243-3.526019.28051HepG2SORT13'-UTR,intron-Distal
    LIN28Bchr628331142833216-4.253853.43975HepG2SERPINB13'-UTR,intron-Distal
    LIN28Bchr175496874654968772-5.3970828.72159HepG2TRIM253'-UTR,intron-Distal
    LIN28Bchr1715649261564937-4.6223610.34406K562PRPF8CDS,intron-Distal
    LIN28Bchr167019315070193211+5.4755310.31179K562PDPR3'-UTR
    LIN28Bchr178057331580573330-5.4506412.47556K562WDR45B3'-UTR,intron-Distal
    LIN28Bchr13680730736807320-4.326288.65175K562STK403'-UTR,intron-Distal
    LIN28Bchr2216296627216296643-3.40311400.00000HepG2FN1CDS,intron-Distal
    LIN28Bchr158522396985224044-6.3887220.24221K562SEC11ACDS,intron-Distal,intron-Proximal
    LIN28Bchr8124195274124195338+3.830785.61746K562FAM83ACDS
    LIN28Bchr6151334943151334956+3.670713.04123K562MTHFD1LCDS
    LIN28Bchr1774776227477626+3.123625.38577HepG2EIF4A15'-UTR,CDS,intron-Distal
    LIN28Bchr39851299298513058+3.698975.19413HepG2ST3GAL63'-UTR,intron-Distal
    LIN28Bchr3107524494107524581+3.357083.81692HepG2BBX3'-UTR
    LIN28Bchr29685897896859071-3.236923.70435HepG2STARD7CDS,intron-Distal,intron-Proximal
    LIN28Bchr3127786825127786836+4.2388314.23821HepG2SEC61A1CDS,intron-Proximal
    LIN28Bchr11118279728118279774+4.4136822.40261K562ATP5LCDS,intron-Distal
    LIN28Bchr63317147133171521+3.466649.83138HepG2SLC39A7CDS
    LIN28Bchr57465087974650914+4.8158510.03221HepG2HMGCRCDS,intron-Distal,intron-Proximal
    LIN28Bchr159943455699434589+4.6709911.26597HepG2IGF1R5'-UTR,CDS
    LIN28Bchr28626583186265883-4.802105.44291K562POLR1ACDS,intron-Distal
    LIN28Bchr26170566361705723-4.599795.48503HepG2XPO13'-UTR,intron-Distal
    LIN28Bchr166143176614393-4.294595.20653K562NOL9CDS,intron-Distal
    LIN28Bchr126564040665640442+7.3766352.82500K562LEMD33'-UTR
    LIN28Bchr125655386256553911+4.0335714.77629K562MYL63'-UTR,CDS
    LIN28Bchr5154191084154191142+5.9333535.38142HepG2LARP1CDS
    LIN28Bchr125343438853434407+3.194943.77649K562EIF4B3'-UTR
    LIN28Bchr83796394237963963+4.797737.21258K562ASH2L5'-UTR,CDS,intron-Distal,intron-Proximal
    LIN28Bchr223667786636677916-3.824773.47885K562MYH93'-UTR,intron-Distal
    LIN28Bchr11129990600129990652+4.585193.47885K562APLP23'-UTR,CDS,intron-Distal,intron-Proximal
    LIN28Bchr2216248872216248878-4.01989400.00000HepG2FN1CDS,intron-Distal,intron-Proximal
    LIN28Bchr9128434720128434793-4.502434.78556K562MAPKAP1CDS,intron-Distal
    LIN28Bchr672899507290002-3.9994715.24456K562SSR13'-UTR,intron-Distal,intron-Proximal
    LIN28Bchr1194578179457864+3.546433.44907HepG2IPO7CDS,intron-Proximal
    LIN28Bchr1269797496979773+3.694944.30200K562TPI13'-UTR
    LIN28Bchr2102507714102507776+3.592397.21637HepG2MAP4K43'-UTR
    LIN28Bchr24770543647705499+3.734976.23555K562MSH2CDS
    LIN28Bchr117456460674564696-3.695663.25521K562XRRA1intron-Distal
    LIN28Bchr1891302891360-3.498179.32706K562NOC2LCDS,intron-Distal,intron-Proximal
    LIN28Bchr139890199398902058+4.741196.50720HepG2FARP1intron-Distal
    LIN28Bchr22123104921231062-3.3264953.66065HepG2APOBCDS,intron-Distal
    LIN28Bchr211590438315904400-3.980895.15600K562SAMSN1intron-Distal
    LIN28Bchr8141842170141842242-6.0404813.67930K562PTK2intron-Distal
    LIN28Bchr105811748658117563-4.862375.00488K562ZWINT3'-UTR,intron-Distal,intron-Proximal
    LIN28Bchr109830393698303964-3.453405.54154HepG2TM9SF3CDS,intron-Distal,intron-Proximal
    LIN28Bchr3196311212196311278+4.308923.47885K562FBXO453'-UTR
    LIN28Bchr13238151832381564-6.97998132.83955K562PTP4A2, RP11-84A19.4CDS,intron-Distal
    LIN28Bchr63455637534556389-4.099344.23668K562C6orf1063'-UTR,intron-Distal
    LIN28Bchr63438950834389532-3.120308.86366HepG2RPS10, RPS10-NUDT3CDS,intron-Distal
    LIN28Bchr7115850616115850689+4.101194.25145K562TES5'-UTR
    LIN28Bchr2114674460114674491+3.150005.39816K562ACTR33'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal
    LIN28Bchr394774389477498+3.660925.47334HepG2SETD53'-UTR,CDS
    LIN28Bchr224573725445737296+3.775335.75355HepG2FAM118A3'-UTR
    LIN28Bchr177520135575201359+6.2712316.26826HepG2SEC14L1CDS,intron-Proximal
    LIN28Bchr175773788557737925+5.7363758.14196K562CLTC3'-UTR,CDS,intron-Distal
    LIN28Bchr157918716479187213+4.0688216.53879K562MORF4L1CDS
    LIN28Bchr34871755348717619-5.6586615.16547K562NCKIPSDCDS,intron-Distal
    LIN28Bchr3138474742138474796-3.445555.83472K562PIK3CBCDS,intron-Distal
    LIN28Bchr6147583435147583490+3.553833.50904K562STXBP55'-UTR,CDS,intron-Proximal
    LIN28Bchr177383923973839241-5.7031446.56567K562UNC13DCDS,intron-Distal,intron-Proximal
    LIN28Bchr111842523918425308+3.6307026.21787HepG2LDHA3'-UTR,CDS,intron-Proximal
    LIN28Bchr59613078896130867-4.669886.27746HepG2ERAP1CDS,intron-Distal,intron-Proximal
    LIN28Bchr2224862982224863045-4.875175.79813HepG2SERPINE2CDS,intron-Distal
    LIN28Bchr35283634952836394+3.137163.65837HepG2ITIH3CDS,intron-Proximal
    LIN28Bchr68840855088408639-4.443517.94742K562AKIRIN2intron-Distal
    LIN28Bchr3128890069128890087-4.7490026.35599K562CNBPCDS,intron-Distal,intron-Proximal
    LIN28Bchr99694117196941197+8.14411154.68965K562RP11-2B6.3intron-Distal
    LIN28Bchr15468389854683958+6.1084520.55926K562MRPL373'-UTR,CDS,intron-Distal
    LIN28Bchr3196541398196541440+3.940433.69113K562PAK2CDS,intron-Proximal
    LIN28Bchr9114997150114997175-3.446989.01990K562PTBP3CDS,intron-Distal
    LIN28Bchr1169512017169512075-3.614248.04510HepG2F5CDS,intron-Distal
    LIN28Bchr8145724306145724368+4.476515.21253K562PPP1R16ACDS
    LIN28Bchr201874441418744493+3.790183.06853K562DTD13'-UTR
    LIN28Bchr161620862116208669+4.253854.13513HepG2ABCC13'-UTR,CDS,intron-Proximal
    LIN28Bchr61075691510756993+3.066453.20430K562SYCP2L, RP11-637O19.3, TMEM14B3'-UTR,intron-Distal
    LIN28Bchr1182841474182841546+5.5246220.96460K562DHX9CDS
    LIN28Bchr12104712706104712790+4.6633910.52112K562TXNRD1CDS,intron-Distal
    LIN28BchrX3866506538665080+6.6154928.75648K562MID1IP13'-UTR
    LIN28Bchr113261013832610202+3.5821714.38906K562EIF3M3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal
    LIN28Bchr1963894936389614-5.3602211.88998K562GTF2F1, CTB-180A7.6CDS,intron-Distal
    LIN28Bchr2180818299180818382-3.251183.77649K562CWC22intron-Distal
    LIN28Bchr2106510124106510233+3.913213.47885K562NCK23'-UTR
    LIN28Bchr118255031282550352-8.0918585.18310K562PRCPCDS,intron-Distal,intron-Proximal
    LIN28Bchr111709871417098719-7.92443400.00000HepG2RPS13CDS,intron-Distal,intron-Proximal




    15 proteins are bound to LIN28B RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr6105529685105529737+3'-UTR3.014674.34904K562UPF1
    chr6105530881105530952+3'-UTR4.790303.83835HepG2FUBP3
    chr6105529632105529667+3'-UTR4.310633.87930K562UPF1
    chr6105529193105529279+3'-UTR4.283263.31904K562IGF2BP1
    chr6105527671105527710+3'-UTR4.239893.20319K562UPF1
    chr6105405051105405135+5'-UTR,CDS3.146363.80732K562ZNF622
    chr6105405985105406044+CDS4.557414.69071HepG2GRWD1
    chr6105405964105406039+CDS,intron-Proximal3.220868.37988HepG2BUD13
    chr6105405972105405985+CDS,intron-Proximal4.404304.01763HepG2GRWD1
    chr6105405967105406022+CDS,intron-Proximal4.729324.55944K562ZNF622
    chr6105405969105406041+CDS,intron-Proximal3.399229.71090HepG2PPIG
    chr6105407357105407452+intron-Distal3.153425.07515K562KHSRP
    chr6105429086105429146+intron-Distal3.122803.25203K562PTBP1
    chr6105413637105413718+intron-Distal3.020076.17398K562KHSRP
    chr6105464482105464548+intron-Distal4.637864.86763HepG2PCBP2
    chr6105429074105429152+intron-Distal4.399434.07628HepG2PTBP1
    chr6105432818105432896+intron-Distal4.999144.64001HepG2U2AF2
    chr6105406951105407001+intron-Distal5.035355.07478HepG2U2AF2
    chr6105407371105407440+intron-Distal4.435624.02395HepG2KHSRP
    chr6105407181105407248+intron-Distal4.860357.24774K562KHSRP
    chr6105413281105413331+intron-Distal4.041263.75546HepG2KHSRP
    chr6105407008105407068+intron-Distal4.8125311.62651HepG2U2AF2
    chr6105408866105408970+intron-Distal4.803357.58902K562KHSRP
    chr6105406849105406960+intron-Distal3.7760512.29548K562KHSRP
    chr6105406384105406451+intron-Distal4.792268.06346K562KHSRP
    chr6105409103105409150+intron-Distal3.723513.25538K562KHSRP
    chr6105407154105407198+intron-Distal3.961023.73609HepG2KHSRP
    chr6105407126105407181+intron-Distal3.747946.48117K562KHSRP
    chr6105419111105419200+intron-Distal3.823163.24603K562KHSRP
    chr6105408774105408834+intron-Distal4.053615.99890HepG2U2AF2
    chr6105518476105518557+intron-Distal3.830583.37809K562HNRNPL
    chr6105450060105450134+intron-Distal4.135153.15106HepG2HNRNPC
    chr6105406718105406803+intron-Distal3.268735.62342K562KHSRP
    chr6105408756105408892+intron-Distal3.412565.90314HepG2KHSRP
    chr6105408834105408926+intron-Distal3.575145.36861HepG2U2AF2
    chr6105419767105419857+intron-Distal4.990845.61339K562QKI
    chr6105517838105517909+intron-Distal4.201108.85307HepG2PCBP2
    chr6105418905105418976+intron-Distal4.711396.51328K562KHSRP
    chr6105419743105419813+intron-Distal4.607054.51735HepG2QKI
    chr6105419813105419855+intron-Distal4.524524.51735HepG2QKI
    chr6105413412105413467+intron-Distal4.045593.58660HepG2ILF3
    chr6105421815105421958+intron-Distal3.324925.22328K562KHSRP
    chr6105407786105407835+intron-Distal4.173744.96658K562KHSRP
    chr6105412953105413017+intron-Distal3.088783.73266K562KHSRP
    chr6105429200105429389+intron-Distal5.302778.32953HepG2QKI
    chr6105408674105408729+intron-Distal4.350565.02888K562KHSRP
    chr6105423266105423369+intron-Distal4.2796217.14122HepG2QKI
    chr6105413017105413097+intron-Distal3.177555.57010K562KHSRP
    chr6105446392105446442+intron-Distal4.408863.35169HepG2U2AF2
    chr6105408999105409047+intron-Distal3.889803.25538K562KHSRP
    chr6105406172105406243+intron-Proximal3.367629.57775HepG2U2AF2
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein LIN28B and its RNA.



    Diffrential Expression
    • 2,557 differentially expressed genes after Knockdown/Knockout LIN28B protein.  





    • 145 RBPs can affect the levels of LIN28B.  







    2,557 differentially expressed genes after Knockdown/Knockout LIN28B protein :

    Only display 100 entries as example. Please click "View All" button to see all 2,557 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    SCYL3ENSG00000000457.9222.93610133.795000.736503.630902.23700HepG2LIN28B
    C1orf112ENSG00000000460.12251.37890386.95310-0.622303.848802.41680HepG2LIN28B
    NFYAENSG00000001167.10734.60310948.51450-0.368702.553901.39200HepG2LIN28B
    CASP10ENSG00000003400.10496.06910749.83780-0.596004.140302.65760HepG2LIN28B
    SLC7A2ENSG00000003989.123197.939205802.44270-0.859504.352002.82820HepG2LIN28B
    ARF5ENSG00000004059.6892.84840673.741200.406102.698301.50440HepG2LIN28B
    FKBP4ENSG00000004478.5959.259401406.77760-0.552405.909504.16540HepG2LIN28B
    RBM6ENSG00000004534.102477.805003470.35640-0.486004.352302.82820HepG2LIN28B
    SLC25A13ENSG00000004864.91174.740201534.14440-0.385103.448302.08460HepG2LIN28B
    ABCB4ENSG00000005471.11533.16270771.02750-0.532204.130102.65070HepG2LIN28B
    KMT2EENSG00000005483.151084.813401502.11950-0.469604.310302.79440HepG2LIN28B
    ZNF195ENSG00000005801.12614.35520421.640800.543004.206902.70760HepG2LIN28B
    ZFXENSG00000005889.111077.02950732.894600.555305.475303.77040HepG2LIN28B
    ASB4ENSG00000005981.853.03720117.86230-1.152004.397702.85680HepG2LIN28B
    C19orf60ENSG00000006015.1366.8359027.901001.260202.623401.44610HepG2LIN28B
    SYNRGENSG00000006114.11513.77870709.39200-0.465403.265501.94710HepG2LIN28B
    CX3CL1ENSG00000006210.62846.078501541.930000.8841013.3161010.81970HepG2LIN28B
    MAP3K9ENSG00000006432.11273.19540414.00460-0.599703.852302.41980HepG2LIN28B
    JHDM1DENSG00000006459.61202.204401904.45940-0.663702.988601.72600HepG2LIN28B
    DBF4ENSG00000006634.3312.58370431.60810-0.465502.500301.35200HepG2LIN28B
    ADIPOR2ENSG00000006831.91898.843503010.12970-0.664707.805605.85250HepG2LIN28B
    MARK4ENSG00000007047.10400.96100561.85350-0.486703.395902.04890HepG2LIN28B
    KIAA0100ENSG00000007202.102661.543703371.98180-0.341303.424202.06850HepG2LIN28B
    ST3GAL1ENSG00000008513.10802.638601200.80400-0.581206.179804.39710HepG2LIN28B
    IL32ENSG00000008517.122932.090301898.105000.627309.027806.93960HepG2LIN28B
    MAPK8IP2ENSG00000008735.10101.7261046.033001.143903.465302.09860HepG2LIN28B
    CSDE1ENSG00000009307.115251.454009730.04870-0.8897019.1670016.33960HepG2LIN28B
    IYDENSG00000009765.1018.955001.699003.479702.963701.70650HepG2LIN28B
    MLXIPLENSG00000009950.113696.594302041.505900.856509.301607.18780HepG2LIN28B
    BAZ1BENSG00000009954.61875.315202805.20150-0.581007.967105.99700HepG2LIN28B
    UQCRC1ENSG00000010256.62353.312403096.62360-0.396004.360902.83390HepG2LIN28B
    HIVEP2ENSG00000010818.4536.19060949.14740-0.823909.550107.41170HepG2LIN28B
    TSPAN9ENSG00000011105.71169.73000903.104600.373102.953401.69920HepG2LIN28B
    ANLNENSG00000011426.61434.586802491.88270-0.796608.990606.90690HepG2LIN28B
    WIZENSG00000011451.13416.48400290.356100.520302.654101.47040HepG2LIN28B
    BRCA1ENSG00000012048.15723.87820972.94210-0.426603.304101.97670HepG2LIN28B
    CLDN11ENSG00000013297.693.96670198.21470-1.076806.236604.44500HepG2LIN28B
    ANGEL1ENSG00000013523.5432.74430632.94700-0.548604.247902.73910HepG2LIN28B
    ZMYND11ENSG00000015171.14786.724101028.71590-0.386902.905101.66000HepG2LIN28B
    ATP2C1ENSG00000017260.151005.720101548.61460-0.622707.483905.56180HepG2LIN28B
    SLC38A5ENSG00000017483.10665.06850890.38980-0.420903.467402.10030HepG2LIN28B
    RUFY3ENSG00000018189.8229.33780342.60000-0.579103.334402.00080HepG2LIN28B
    WWTR1ENSG00000018408.101192.008302058.97220-0.788506.087504.31810HepG2LIN28B
    AGPSENSG00000018510.82320.554603272.32100-0.495804.555102.98780HepG2LIN28B
    CD74ENSG00000019582.101907.074001371.211400.475804.582603.01120HepG2LIN28B
    ZRANB1ENSG00000019995.6537.55670808.03720-0.588004.906503.28080HepG2LIN28B
    PLEKHB1ENSG00000021300.9985.032501580.13000-0.681809.268807.15740HepG2LIN28B
    SLC7A9ENSG00000021488.8129.7109058.492301.148904.816403.20300HepG2LIN28B
    NDUFS1ENSG00000023228.92895.942103868.40840-0.417704.377802.84370HepG2LIN28B
    AKAP11ENSG00000023516.7642.802201242.16640-0.950404.926203.29590HepG2LIN28B
    DEPDC1ENSG00000024526.12443.67310631.48440-0.509203.399002.05080HepG2LIN28B
    CCDC28AENSG00000024862.12340.06870219.858200.629203.979502.52560HepG2LIN28B
    RNASET2ENSG00000026297.111897.536203012.51650-0.666809.868807.70950HepG2LIN28B
    B4GALT7ENSG00000027847.9292.29600199.611700.550102.524201.36970HepG2LIN28B
    ARNTL2ENSG00000029153.10245.36880363.97890-0.568903.340302.00390HepG2LIN28B
    NUP160ENSG00000030066.91463.479502006.83120-0.455504.439702.89110HepG2LIN28B
    ALG1ENSG00000033011.7952.18320693.751300.456703.298901.97390HepG2LIN28B
    CHPF2ENSG00000033100.10750.48850511.743200.552304.260902.75160HepG2LIN28B
    GAB2ENSG00000033327.8271.47530445.91740-0.716005.115803.45580HepG2LIN28B
    PIAS1ENSG00000033800.9362.04750533.23570-0.558603.810002.38550HepG2LIN28B
    ASTE1ENSG00000034533.7181.41950109.546700.727702.853201.62160HepG2LIN28B
    PEX3ENSG00000034693.10288.79750426.03010-0.560903.092201.81060HepG2LIN28B
    GABARAPL2ENSG00000034713.3747.852101004.28910-0.425302.900501.65580HepG2LIN28B
    SH3YL1ENSG00000035115.17462.04930709.47740-0.618704.615403.03530HepG2LIN28B
    FAM136AENSG00000035141.32236.479801599.121400.483905.303703.61880HepG2LIN28B
    DEPDC1BENSG00000035499.8478.55930870.40860-0.8630010.290608.08050HepG2LIN28B
    ADSSENSG00000035687.9578.05720846.70780-0.550704.658803.06900HepG2LIN28B
    RFC1ENSG00000035928.102177.095002710.72980-0.316302.540001.38140HepG2LIN28B
    C6ENSG00000039537.9125.8499015.111503.0579016.2460013.57350HepG2LIN28B
    RAI14ENSG00000039560.9458.20500766.61010-0.742507.463705.54400HepG2LIN28B
    PHLPP2ENSG00000040199.14401.97340546.44990-0.443002.670701.48370HepG2LIN28B
    SPDL1ENSG00000040275.12326.80310563.00570-0.784706.938405.07340HepG2LIN28B
    TDP1ENSG00000042088.9389.22000535.41580-0.460102.954301.69980HepG2LIN28B
    CUL7ENSG00000044090.42763.437202221.270600.315002.729101.52490HepG2LIN28B
    PHKA2ENSG00000044446.72273.911703012.01620-0.405603.701802.29440HepG2LIN28B
    CPENSG00000047457.913892.4998031161.65070-1.1655010.126907.93720HepG2LIN28B
    USP28ENSG00000048028.7509.07220796.29550-0.645405.652603.93050HepG2LIN28B
    ZNF800ENSG00000048405.5358.21980251.751900.508702.983901.72240HepG2LIN28B
    RSF1ENSG00000048649.9797.819801290.56780-0.693908.045206.06110HepG2LIN28B
    FAM120AENSG00000048828.121838.913301429.572600.363203.237301.92530HepG2LIN28B
    RCN1ENSG00000049449.4710.866801184.66460-0.736808.350906.33170HepG2LIN28B
    FNIP2ENSG00000052795.8622.452001277.53430-1.037302.758201.54720HepG2LIN28B
    FSTL4ENSG00000053108.12180.52820110.518900.707802.857401.62460HepG2LIN28B
    FOXN3ENSG00000053254.112582.505003537.85370-0.454103.009601.74190HepG2LIN28B
    LAMA3ENSG00000053747.11143.5470086.393300.732402.445601.30990HepG2LIN28B
    KIF1BENSG00000054523.122371.592903051.33800-0.363603.389202.04340HepG2LIN28B
    TBC1D22AENSG00000054611.9270.59650395.82540-0.548703.364702.02380HepG2LIN28B
    SYNE2ENSG00000054654.11863.464301253.14250-0.537305.269103.59040HepG2LIN28B
    ATP9AENSG00000054793.91630.933902301.91660-0.497105.325703.63900HepG2LIN28B
    PUM2ENSG00000055917.112672.039803617.69590-0.437104.484002.92680HepG2LIN28B
    RC3H2ENSG00000056586.11948.343001211.10230-0.352802.457201.31970HepG2LIN28B
    DCBLD2ENSG00000057019.112287.525903233.51770-0.499305.476103.77040HepG2LIN28B
    USP13ENSG00000058056.4800.856001438.08650-0.8445012.295009.90120HepG2LIN28B
    SEC61A1ENSG00000058262.52996.556504738.63470-0.6612011.257408.95420HepG2LIN28B
    ATP2B4ENSG00000058668.10455.56860798.90950-0.810409.061206.96950HepG2LIN28B
    DGKGENSG00000058866.10109.50640176.76030-0.690802.962501.70560HepG2LIN28B
    SLC2A3ENSG00000059804.115726.9354011953.26630-1.061603.794702.37210HepG2LIN28B
    WNK1ENSG00000060237.123274.787104172.35700-0.349503.185801.88210HepG2LIN28B
    CREB3L3ENSG00000060566.9300.45530185.321400.697004.003102.54590HepG2LIN28B
    BCAT1ENSG00000060982.101763.709601320.373600.417603.247401.93360HepG2LIN28B
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    145 RBPs can affect the gene expression of LIN28B :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    LIN28BENSG00000187772.61637.474001279.868100.355402.380401.38270HepG2AATF
    LIN28BENSG00000187772.61093.777001994.38290-0.8666013.5263011.57450HepG2ADAR
    LIN28BENSG00000187772.64001.101501784.174501.1650019.1186017.85070HepG2AKAP1
    LIN28BENSG00000187772.61660.687001230.324500.432602.669901.64890HepG2AKAP8
    LIN28BENSG00000187772.6935.186501958.48940-1.0664015.4605013.85370HepG2AKAP8L
    LIN28BENSG00000187772.62016.505501476.297400.449803.935503.00540HepG2ASCC1
    LIN28BENSG00000187772.62978.062203376.76950-0.181302.021801.41780HepG2AUH
    LIN28BENSG00000187772.6749.110902147.55810-1.519406.819205.30930HepG2BCCIP
    LIN28BENSG00000187772.61508.000802583.32090-0.7766012.1489010.82560HepG2CPSF6
    LIN28BENSG00000187772.6787.817001327.05600-0.752302.749701.67520HepG2CSTF2
    LIN28BENSG00000187772.6319.683201413.04080-2.1441029.3354027.47440HepG2DDX21
    LIN28BENSG00000187772.61004.831901381.97480-0.459803.876502.78320HepG2DDX24
    LIN28BENSG00000187772.62731.730001709.196200.676408.192807.16730HepG2DDX3X
    LIN28BENSG00000187772.61816.449702933.56030-0.691504.364403.14850HepG2DDX59
    LIN28BENSG00000187772.61814.197001468.018300.305401.826401.31420HepG2DDX6
    LIN28BENSG00000187772.61317.490201936.98070-0.556006.032904.62140HepG2DHX30
    LIN28BENSG00000187772.61389.687001864.82240-0.424304.938804.08250HepG2DKC1
    LIN28BENSG00000187772.61480.975402008.31210-0.439406.908705.83730HepG2DNAJC21
    LIN28BENSG00000187772.61283.454201990.42930-0.6330018.6451017.09930HepG2DNAJC2
    LIN28BENSG00000187772.61295.647901617.57220-0.320202.163201.34730HepG2EEF2
    LIN28BENSG00000187772.61823.122301348.484700.435003.894202.57490HepG2EFTUD2
    LIN28BENSG00000187772.6517.483301411.45650-1.4476025.8166024.13540HepG2EIF2S1
    LIN28BENSG00000187772.6581.683501559.92940-1.4232023.0784021.27330HepG2EIF4A3
    LIN28BENSG00000187772.62013.127702456.41310-0.287103.539302.61090HepG2EIF4G1
    LIN28BENSG00000187772.62855.642103876.83340-0.441107.047206.16240HepG2ETF1
    LIN28BENSG00000187772.61679.858301346.160500.319402.661801.53620HepG2FASTKD2
    LIN28BENSG00000187772.61400.90610785.435400.8347013.5068011.82930HepG2FUBP3
    LIN28BENSG00000187772.62446.288901573.588700.636405.600904.63860HepG2FXR1
    LIN28BENSG00000187772.6956.474901811.46860-0.9214012.4055010.25550HepG2GNB2L1
    LIN28BENSG00000187772.6993.111502928.31480-1.5600035.4945033.50280HepG2GPKOW
    LIN28BENSG00000187772.62899.099801842.399600.653904.098702.38070HepG2HLTF
    LIN28BENSG00000187772.6737.980402027.55060-1.4581040.0878038.19740HepG2HNRNPA1
    LIN28BENSG00000187772.6741.894202255.22580-1.6040047.2690044.85770HepG2HNRNPC
    LIN28BENSG00000187772.62035.620803053.58720-0.5850014.9035013.41060HepG2HNRNPF
    LIN28BENSG00000187772.63165.996301477.894401.0990024.3041022.43640HepG2HNRNPK
    LIN28BENSG00000187772.61888.912602268.53420-0.264203.024902.32250HepG2HNRNPL
    LIN28BENSG00000187772.61779.038102794.55200-0.651508.489507.45190HepG2HNRNPLL
    LIN28BENSG00000187772.61497.208302240.31930-0.5814014.0379012.76360HepG2HNRNPU
    LIN28BENSG00000187772.61810.281803006.92190-0.7321015.3374013.78200HepG2IGF2BP1
    LIN28BENSG00000187772.61057.432301484.01510-0.488904.232603.41330HepG2IGF2BP2
    LIN28BENSG00000187772.61140.019702288.42040-1.0053048.7725046.27750HepG2ILF2
    LIN28BENSG00000187772.62198.651003982.32870-0.857003.724402.76000HepG2LARP4
    LIN28BENSG00000187772.6657.941901863.53170-1.5020031.6369028.30680HepG2LIN28B
    LIN28BENSG00000187772.62064.076401574.136700.390803.073102.38150HepG2MAGOH
    LIN28BENSG00000187772.62328.353701582.998100.556605.108104.27520HepG2MATR3
    LIN28BENSG00000187772.6845.299602004.58910-1.245804.674603.64370HepG2MSI2
    LIN28BENSG00000187772.61638.700502477.96340-0.596607.912806.69360HepG2NSUN2
    LIN28BENSG00000187772.61855.615602217.59430-0.257103.202902.29890HepG2PARN
    LIN28BENSG00000187772.61130.167601819.85820-0.687305.191603.79930HepG2PCBP2
    LIN28BENSG00000187772.61298.226501998.19440-0.6222012.5103011.00760HepG2PPIL4
    LIN28BENSG00000187772.61518.549701976.05720-0.379906.048304.95200HepG2PRPF4
    LIN28BENSG00000187772.6986.410401629.73410-0.724402.474001.70830HepG2PRPF8
    LIN28BENSG00000187772.62955.962401523.993400.9557036.3290034.80420HepG2PTBP1
    LIN28BENSG00000187772.61803.655702357.03610-0.386004.399203.66790HepG2PUF60
    LIN28BENSG00000187772.62539.942501985.312200.355305.608804.78740HepG2PUS1
    LIN28BENSG00000187772.62682.821301650.533000.7007015.3851014.08280HepG2QKI
    LIN28BENSG00000187772.62718.921801756.235900.630403.769002.95080HepG2RAVER1
    LIN28BENSG00000187772.6918.396501305.29160-0.507203.210001.36990HepG2RBM14
    LIN28BENSG00000187772.63704.386203240.346600.193001.959001.50340HepG2RBM22
    LIN28BENSG00000187772.61005.442201737.43460-0.789104.300502.97700HepG2RCC2
    LIN28BENSG00000187772.62138.988701696.062400.334604.681504.01190HepG2NELFE
    LIN28BENSG00000187772.61891.518301579.644300.259803.021202.38080HepG2RECQL
    LIN28BENSG00000187772.62198.338003289.30940-0.581408.508207.41130HepG2RPLP0
    LIN28BENSG00000187772.61153.803501725.10320-0.580303.729902.63430HepG2RPS10
    LIN28BENSG00000187772.6954.429101277.71710-0.420904.088903.35650HepG2RPS19
    LIN28BENSG00000187772.61452.778601973.35980-0.441803.787602.85530HepG2RPS2
    LIN28BENSG00000187772.61011.869501282.37680-0.341802.286901.42900HepG2SERBP1
    LIN28BENSG00000187772.62219.813702766.00790-0.317402.845202.12980HepG2SF3B1
    LIN28BENSG00000187772.61633.515302259.75690-0.468209.202208.03980HepG2SLBP
    LIN28BENSG00000187772.61930.567702326.71070-0.269304.739103.93450HepG2SMN1
    LIN28BENSG00000187772.61874.426203077.68550-0.715405.794304.65590HepG2SNRNP70
    LIN28BENSG00000187772.63110.309001656.149600.9091036.5324035.24450HepG2SRSF1
    LIN28BENSG00000187772.63892.806302976.366500.387202.519101.56730HepG2SRSF3
    LIN28BENSG00000187772.62044.712403000.01340-0.5531013.5620012.22280HepG2SRSF7
    LIN28BENSG00000187772.61252.298303177.76260-1.3434058.0763056.47780HepG2SSB
    LIN28BENSG00000187772.64006.768302646.656600.5982013.0732011.88710HepG2SUCLG1
    LIN28BENSG00000187772.6813.004201351.78590-0.733503.353001.88030HepG2SUGP2
    LIN28BENSG00000187772.6966.534402102.07100-1.120904.349503.52900HepG2SUPV3L1
    LIN28BENSG00000187772.62407.932901488.601900.6937015.8677014.68890HepG2TAF15
    LIN28BENSG00000187772.62212.066802724.03700-0.300402.469201.77850HepG2TARDBP
    LIN28BENSG00000187772.6674.500802177.07400-1.6905066.5938064.75630HepG2TIAL1
    LIN28BENSG00000187772.61366.324802196.33660-0.6848019.0363017.72780HepG2TRIM56
    LIN28BENSG00000187772.63010.688102118.088600.507202.347501.76460HepG2U2AF1
    LIN28BENSG00000187772.6668.119001241.96270-0.894403.649702.77970HepG2UCHL5
    LIN28BENSG00000187772.61496.220002069.58610-0.468008.485807.37340HepG2UPF1
    LIN28BENSG00000187772.6884.696701925.64280-1.122104.213302.95920HepG2UPF2
    LIN28BENSG00000187772.63074.507701998.094700.6216018.5870017.24570HepG2UTP3
    LIN28BENSG00000187772.62604.316001726.944000.592604.318402.73640HepG2XRCC5
    LIN28BENSG00000187772.63667.936101931.365500.925209.974108.09840HepG2XRCC6
    LIN28BENSG00000187772.6901.524102069.24930-1.198704.926903.96790HepG2XRN2
    LIN28BENSG00000187772.6821.659301950.18570-1.2470042.8564040.87320HepG2ZC3H8
    LIN28BENSG00000187772.61478.226802276.13990-0.6227012.7902011.83150HepG2ZNF622
    LIN28BENSG00000187772.62774.564901789.206700.632807.252005.28620K562AARS
    LIN28BENSG00000187772.63269.074205033.89400-0.622809.456407.25070K562ABCF1
    LIN28BENSG00000187772.61737.137802284.49360-0.395205.297704.55360K562AGGF1
    LIN28BENSG00000187772.61969.755502510.07460-0.349703.544202.39820K562AKAP8
    LIN28BENSG00000187772.61196.892202377.06050-0.9899018.9403016.92600K562AKAP8L
    LIN28BENSG00000187772.61559.083704318.18870-1.469709.280808.30760K562AQR
    LIN28BENSG00000187772.61387.983302394.27200-0.7866017.8489014.72890K562BCCIP
    LIN28BENSG00000187772.61560.889602313.85710-0.5679014.0074011.82310K562BCLAF1
    LIN28BENSG00000187772.61322.073702214.39400-0.744106.383505.04860K562BOP1
    LIN28BENSG00000187772.62039.582603506.27920-0.7817011.055808.28320K562BUD13
    LIN28BENSG00000187772.62109.525803641.44880-0.787603.382101.76340K562CKAP4
    LIN28BENSG00000187772.61278.444103729.44200-1.5446019.5806016.95230K562CNOT7
    LIN28BENSG00000187772.63220.429204311.56430-0.421002.823801.70530K562CPEB4
    LIN28BENSG00000187772.6941.568902354.62200-1.3224018.9554016.89890K562CPSF6
    LIN28BENSG00000187772.61011.023601755.40580-0.7960017.0828014.20940K562CSTF2
    LIN28BENSG00000187772.61733.149902490.60010-0.5231010.678708.31110K562DDX21
    LIN28BENSG00000187772.61147.236401570.73290-0.453303.600001.52300K562DDX24
    LIN28BENSG00000187772.61066.912101502.94890-0.494402.736901.44130K562DDX6
    LIN28BENSG00000187772.62184.904002558.25530-0.227602.337901.54240K562DKC1
    LIN28BENSG00000187772.6893.506201628.07010-0.865609.531507.23400K562EIF2S1
    LIN28BENSG00000187772.61002.932401394.58500-0.475603.947902.52620K562EIF4B
    LIN28BENSG00000187772.61352.390902178.63910-0.6879011.954209.37260K562EXOSC5
    LIN28BENSG00000187772.61582.430803618.45160-1.1932030.5474027.44950K562FIP1L1
    LIN28BENSG00000187772.61331.208201699.06670-0.352002.397601.35930K562FKBP4
    LIN28BENSG00000187772.61225.399402395.60580-0.9671014.1510012.14860K562FMR1
    LIN28BENSG00000187772.6995.884502030.41990-1.0277011.546809.54820K562FTO
    LIN28BENSG00000187772.63233.063201610.560701.0052031.1659029.27100K562FXR1
    LIN28BENSG00000187772.62368.504701766.919500.422602.780702.07040K562G3BP2
    LIN28BENSG00000187772.62044.631702941.84360-0.5249010.100808.04270K562GLRX3
    LIN28BENSG00000187772.6829.640502248.15320-1.4382018.1969016.08770K562GPKOW
    LIN28BENSG00000187772.62732.145104857.73620-0.830309.383007.96630K562GRSF1
    LIN28BENSG00000187772.61636.442802429.14220-0.569908.839107.02240K562HNRNPA1
    LIN28BENSG00000187772.61391.578302483.91500-0.835904.702802.98100K562HNRNPA2B1
    LIN28BENSG00000187772.61809.026103489.80680-0.947909.244906.56460K562HNRNPAB
    LIN28BENSG00000187772.6423.147901958.66130-2.2106024.5991022.89570K562HNRNPC
    LIN28BENSG00000187772.61160.329701748.68620-0.591704.106202.68400K562HNRNPF
    LIN28BENSG00000187772.64429.713002247.382500.9789018.4494015.35560K562HNRNPK
    LIN28BENSG00000187772.62160.089602690.11200-0.316604.006002.92340K562HNRNPU
    LIN28BENSG00000187772.63809.038604905.91630-0.365103.776202.85090K562HSPD1
    LIN28BENSG00000187772.61177.457002249.63850-0.9340012.297509.65190K562IGF2BP2
    LIN28BENSG00000187772.61769.668102288.36440-0.370803.595002.19700K562IGF2BP3
    LIN28BENSG00000187772.61918.008503403.06630-0.827205.882903.75720K562ILF2
    LIN28BENSG00000187772.62016.836202522.86090-0.323003.145802.26220K562KIF1C
    LIN28BENSG00000187772.6922.428201919.46250-1.0572012.9711010.82050K562KRR1
    LIN28BENSG00000187772.6638.715101985.67630-1.6364019.0544015.46940K562LIN28B
    LIN28BENSG00000187772.63049.265702364.720400.366704.145603.11210K562MAGOH
    LIN28BENSG00000187772.61794.131802414.83190-0.428605.323803.66500K562MAK16
    LIN28BENSG00000187772.61144.345002194.41940-0.9393012.2670010.34990K562METAP2
    LIN28BENSG00000187772.62132.739303092.97310-0.5363014.1518012.49290K562MTPAP
    LIN28BENSG00000187772.61900.046203436.52490-0.8549048.8823046.43810K562NSUN2
    LIN28BENSG00000187772.61299.957601927.87330-0.568503.673701.94410K562NUSAP1
    LIN28BENSG00000187772.62528.154503582.89410-0.503003.121701.80210K562PABPC1
    LIN28BENSG00000187772.61453.409802173.24780-0.580402.514101.58220K562PABPN1
    LIN28BENSG00000187772.61873.063102311.30030-0.303303.013001.59920K562PCBP1
    LIN28BENSG00000187772.61619.025902104.09570-0.378103.788402.64370K562PCBP2
    LIN28BENSG00000187772.61701.233702771.22840-0.703905.387004.22140K562PCBP3
    LIN28BENSG00000187772.61550.153702125.71130-0.455504.806803.75020K562POLR2G
    LIN28BENSG00000187772.62470.732104107.59220-0.7334012.1661010.07570K562PPIG
    LIN28BENSG00000187772.61534.247002584.26640-0.752203.416601.73480K562PPP1R8
    LIN28BENSG00000187772.61016.461701756.03350-0.788805.885004.48730K562PSIP1
    LIN28BENSG00000187772.63289.963102297.441200.517908.118207.02370K562PTBP1
    LIN28BENSG00000187772.64468.903306035.58140-0.433602.545001.62250K562PUM2
    LIN28BENSG00000187772.61441.134902203.21150-0.612408.252306.69070K562RBM22
    LIN28BENSG00000187772.61639.370802673.75240-0.705703.100701.44430K562RBM39
    LIN28BENSG00000187772.61040.680301601.61590-0.622004.542003.27000K562RCC2
    LIN28BENSG00000187772.61507.019601087.724100.470303.524402.38230K562RPS3
    LIN28BENSG00000187772.62088.601503396.91290-0.701704.158902.18930K562SBDS
    LIN28BENSG00000187772.62567.087001958.082200.390603.815802.09750K562SDAD1
    LIN28BENSG00000187772.61175.515101987.79320-0.757902.964201.70370K562SF1
    LIN28BENSG00000187772.62042.074603391.04140-0.7317015.1859013.39070K562SF3A3
    LIN28BENSG00000187772.61131.523802137.82340-0.917909.720207.81660K562SF3B1
    LIN28BENSG00000187772.61430.083001838.65380-0.362602.273601.50050K562SF3B4
    LIN28BENSG00000187772.6721.302201198.06910-0.732002.974001.66050K562SLBP
    LIN28BENSG00000187772.62087.420903488.95690-0.741106.192903.51210K562SMN1
    LIN28BENSG00000187772.61129.347801518.34470-0.427002.547601.57550K562SRFBP1
    LIN28BENSG00000187772.61613.072902126.91990-0.399003.817602.54710K562SRSF5
    LIN28BENSG00000187772.61494.264902222.64210-0.5728011.927809.46440K562SRSF7
    LIN28BENSG00000187772.61598.614602730.41520-0.772303.640501.91860K562SUPT6H
    LIN28BENSG00000187772.63066.179402132.026900.524108.805207.33860K562SYNCRIP
    LIN28BENSG00000187772.61650.771402279.48870-0.465603.551202.74590K562TARDBP
    LIN28BENSG00000187772.61578.563402198.79640-0.478106.345605.03310K562TIA1
    LIN28BENSG00000187772.6883.814601689.07570-0.934407.615805.99460K562TIAL1
    LIN28BENSG00000187772.61585.916302157.42190-0.444004.689203.19600K562TRA2A
    LIN28BENSG00000187772.6983.707601793.82500-0.866706.728605.10720K562TRIM56
    LIN28BENSG00000187772.62686.907504233.10280-0.655809.388006.76310K562TRIP6
    LIN28BENSG00000187772.61263.789502013.95740-0.672302.734801.72250K562UCHL5
    LIN28BENSG00000187772.62119.816103643.82390-0.7815017.9188016.26620K562UPF1
    LIN28BENSG00000187772.61524.131203012.03420-0.9828015.7329013.25880K562UTP3
    LIN28BENSG00000187772.61576.433803117.89910-0.9839024.8012022.32860K562WDR3
    LIN28BENSG00000187772.62960.460901708.922700.792604.882002.62600K562XRCC6
    LIN28BENSG00000187772.62775.511704865.48180-0.809803.888802.83440K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    349 alternative splicing events after Knockdown/Knockout LIN28B protein :

    Only display 100 entries as example. Please click "View All" button to see all 349 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SECARM1ENSG00000142453.7chr19+1103205011032119110317251103180311032290110334530.145000.000070.09717includedK562LIN28B
    SEHNRNPCENSG00000092199.13chr14-2173177821731988217314692173149521737456217375480.064000.000070.09717includedK562LIN28B
    SEHADHENSG00000138796.11chr4+1089490941089492251089486671089489161089543311089544480.053000.000030.06453includedK562LIN28B
    SETESCENSG00000088992.13chr12-1174864851174866151174845811174846431174868231174869630.126000.000030.06328includedK562LIN28B
    SEYBX3ENSG00000060138.8chr12-1086250610862713108566491085674710865809108659320.185000.000000.01560includedK562LIN28B
    SEUSMG5ENSG00000173915.8chr10-105155502105155789105152127105152223105156165105156198-0.082000.000040.07010excludedK562LIN28B
    SEPCNPENSG00000081154.7chr3+101304280101304355101293037101293123101309058101309114-0.054000.000050.08444excludedK562LIN28B
    SEDDX5ENSG00000108654.7chr17-624967926249689162495733624964446249812762498187-0.120000.000000.00126excludedK562LIN28B
    SEPICALMENSG00000073921.13chr11-856891128568913685687665856877258569217185692271-0.130000.000000.00128excludedK562LIN28B
    SEPICALMENSG00000073921.13chr11-857012928570144285694908856950168570786885707972-0.101000.000030.06328excludedK562LIN28B
    SESNHG8ENSG00000269893.2chr4+119200088119200292119199909119199947119200543119200586-0.092000.000070.09717excludedK562LIN28B
    SEAP2S1ENSG00000042753.7chr19-473493004734939947342721473428354735402047354034-0.075000.000070.09717excludedK562LIN28B
    SELEF1ENSG00000138795.5chr4-109002741109002825109000647109000770109004511109004602-0.237000.000000.00000excludedK562LIN28B
    SENONOENSG00000147140.11chrX+705042467050430370503432705035717051047870510641-0.091000.000020.04909excludedK562LIN28B
    SERBPJENSG00000168214.16chr4+263640672636425026322635263226702638797426388013-0.296000.000010.04783excludedK562LIN28B
    SEPRAMEENSG00000185686.13chr22-228992312289935022893273228935112289996422900174-0.056000.000000.00637excludedK562LIN28B
    SEUBE2IENSG00000103275.14chr16+136239713626041359636135977413640201364097-0.070000.000020.05378excludedK562LIN28B
    SEARPC1BENSG00000130429.8chr7+989749609897507898972352989724049898332498983401-0.063000.000030.06328excludedK562LIN28B
    SEASH2LENSG00000129691.11chr8+379635023796365737963067379632563796389537963962-0.166000.000040.07033excludedK562LIN28B
    SEADAT2ENSG00000189007.11chr6-143751401143751614143749748143749821143753641143753748-0.124000.000010.02384excludedK562LIN28B
    SEZC3H4ENSG00000130749.5chr19-4761415147614213475976454759786547615404476155040.380000.000010.01071includedHepG2LIN28B
    SEADD1ENSG00000087274.12chr4+2928368292840229277402927839292989729317890.125000.000070.04581includedHepG2LIN28B
    SEMYL6ENSG00000092841.14chr12+5655440956554454565540265655410456555170565553710.128000.000000.00015includedHepG2LIN28B
    SEPFDN5ENSG00000123349.9chr12+5369002753690059536893355368942353691633536917080.083000.000020.01790includedHepG2LIN28B
    SEMTIF2ENSG00000085760.10chr2-5549173755491846554908935549100155494704554947710.051000.000100.06231includedHepG2LIN28B
    SESENP6ENSG00000112701.13chr6+7635039976350420763444227634452776357446763575170.268000.000030.02300includedHepG2LIN28B
    SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.097000.000000.00026includedHepG2LIN28B
    SEEIF4HENSG00000106682.10chr7+7360457673604636736041517360424873609070736092080.139000.000000.00004includedHepG2LIN28B
    SEZNF207ENSG00000010244.12chr17+3069368330693776306923483069250630694790306950330.180000.000100.06268includedHepG2LIN28B
    SESEC31AENSG00000138674.12chr4-8378368683783725837788418377891783784470837845450.152000.000010.00987includedHepG2LIN28B
    SETRIM33ENSG00000197323.6chr1-1149630011149630731149528051149529381149640571149642580.300000.000000.00142includedHepG2LIN28B
    SEUGP2ENSG00000169764.10chr2+6406967264069733640689906406933864083439640835670.189000.000100.06240includedHepG2LIN28B
    SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.084000.000010.01153includedHepG2LIN28B
    SEMACF1ENSG00000127603.19chr1+3994659139946702399454693994568139950272399504020.119000.000100.06240includedHepG2LIN28B
    SEFIP1L1ENSG00000145216.11chr4+5428078154280889542658965426600654292038542921320.247000.000010.01206includedHepG2LIN28B
    SEHMGN1ENSG00000205581.6chr21-4071775540717884407170714071720040720217407202650.056000.000010.01206includedHepG2LIN28B
    SESONENSG00000159140.13chr21+3494485634944936349412763494139334945613349457610.118000.000000.00191includedHepG2LIN28B
    SESH3D19ENSG00000109686.12chr4-1520653711520654401520650611520652021520690731520693380.230000.000000.00169includedHepG2LIN28B
    SEBIRC5ENSG00000089685.10chr17+7621204676212115762107607621087076212744762128620.113000.000000.00007includedHepG2LIN28B
    SEFAM45AENSG00000119979.11chr10+1208642751208645341208636061208637091208674791208676760.348000.000040.03537includedHepG2LIN28B
    SEAP2M1ENSG00000161203.9chr3+1838983491838984381838979561838980391838986361838990740.111000.000130.07159includedHepG2LIN28B
    SEABCC2ENSG00000023839.6chr10+1015565311015566101015541691015542251015568531015578530.210000.000000.00445includedHepG2LIN28B
    SEABCC2ENSG00000023839.6chr10+1015768201015769531015727741015729011015770641015772410.194000.000100.06231includedHepG2LIN28B
    SERAD9AENSG00000172613.3chr11+6715985167160012671596316715970267160124671602530.524000.000200.09667includedHepG2LIN28B
    SEAGPSENSG00000018510.8chr2+1783068471783069631783056921783057641783071341783072140.094000.000140.07569includedHepG2LIN28B
    SEGTF2H2CENSG00000183474.11chr5+6886355368863604688627936886288068863979688640340.457000.000020.02035includedHepG2LIN28B
    SEACOT9ENSG00000123130.12chrX-2375245723752484237512882375133423754035237541330.390000.000050.03762includedHepG2LIN28B
    SEFN1ENSG00000115414.14chr2-2162576532162579262162563542162565372162592502162594420.079000.000000.00000includedHepG2LIN28B
    SEXPO1ENSG00000082898.12chr2-6175240461752468617497456174981861753554617536560.083000.000000.00142includedHepG2LIN28B
    SECLSTN1ENSG00000171603.12chr1-9797555979761297959429796100980115198013140.138000.000000.00142includedHepG2LIN28B
    SETNRC6AENSG00000090905.13chr16+2480479324804970248005522480313824805864248060400.255000.000000.00026includedHepG2LIN28B
    SEDENND5AENSG00000184014.3chr11-9192173919232491914029191496919967891999130.120000.000030.02779includedHepG2LIN28B
    SEKDM4CENSG00000107077.13chr9+7105401710550071036847103870712806571282360.282000.000010.00915includedHepG2LIN28B
    SEGPR35ENSG00000178623.7chr2+2415578582415579132415566202415568102415583042415584480.240000.000070.04853includedHepG2LIN28B
    SESTK36ENSG00000163482.7chr2+2195531132195532162195498072195499512195534192195535990.241000.000010.00904includedHepG2LIN28B
    SESRSF11ENSG00000116754.9chr1+7071279970712832707125007071259070715634707157300.058000.000180.09018includedHepG2LIN28B
    SEPNPLA3ENSG00000100344.6chr22+4433521544335333443329304433315244335872443360050.169000.000010.01397includedHepG2LIN28B
    SEOS9ENSG00000135506.11chr12+5811388158114046581127755811296558114188581143010.121000.000150.08101includedHepG2LIN28B
    SEPOM121ENSG00000196313.7chr7+7238430172384365723614717236164972396799723970150.163000.000000.00169includedHepG2LIN28B
    SENEDD4LENSG00000049759.12chr18+5600270956002769560010495600112456008269560084010.345000.000000.00520includedHepG2LIN28B
    SEWDR77ENSG00000116455.9chr1-1119841201119842261119839191119840111119846461119847150.087000.000140.07569includedHepG2LIN28B
    SEHNRNPH1ENSG00000169045.13chr5-1790438691790439231790431581790432191790440211790441110.101000.000190.09385includedHepG2LIN28B
    SETTC38ENSG00000075234.12chr22+4666503846665186466644104666448846668231466683130.080000.000020.01720includedHepG2LIN28B
    SEHMG20AENSG00000140382.10chr15+7774006077740153777130157771334677750745777508380.155000.000000.00388includedHepG2LIN28B
    SEFNIP2ENSG00000052795.8chr4+1597549521597550421597546791597547801597565561597566280.478000.000050.03691includedHepG2LIN28B
    SETEX22ENSG00000226174.2chr14+1059156951059157461059117541059118481059163941059164430.285000.000050.03549includedHepG2LIN28B
    SEEPB41L2ENSG00000079819.12chr6-1311978131311979151311907981311912661311992431311993900.208000.000140.07569includedHepG2LIN28B
    SEIGF2BP2ENSG00000073792.11chr3-1854109641854110161854104861854105501854143991854144510.108000.000170.08720includedHepG2LIN28B
    SETCEAL8ENSG00000180964.12chrX-102509532102509605102507922102508945102510005102510131-0.229000.000000.00169excludedHepG2LIN28B
    SEIL17RBENSG00000056736.5chr3+538893205388936853886897538870245389087053891013-0.203000.000000.00643excludedHepG2LIN28B
    SEANKHD1ENSG00000131503.16chr5+139876104139876863139866542139866645139884405139884551-0.216000.000020.01790excludedHepG2LIN28B
    SEAHSGENSG00000145192.8chr3+186336079186336280186334975186335139186338374186339089-0.368000.000130.07159excludedHepG2LIN28B
    SEPLD3ENSG00000105223.14chr19+408714594087183740854596408546754087232540872417-0.212000.000020.01790excludedHepG2LIN28B
    SENASPENSG00000132780.12chr1+460729924607400946072153460722634607884046078920-0.165000.000000.00001excludedHepG2LIN28B
    SEPPANENSG00000130810.15chr19+102174981021768110217314102173471021818010218282-0.275000.000020.01644excludedHepG2LIN28B
    SEBPIFB2ENSG00000078898.6chr20+315960053159617931595405315955663159634631596489-0.228000.000120.06963excludedHepG2LIN28B
    SEPTP4A1ENSG00000112245.6chr6+642422416424243564237911642379896428634064286487-0.214000.000020.01790excludedHepG2LIN28B
    SECTSBENSG00000164733.16chr8-117218841172197211710837117109881172550911725549-0.089000.000170.08890excludedHepG2LIN28B
    SESLC39A14ENSG00000104635.9chr8+222505662225074522224799222249212226220822262383-0.223000.000000.00020excludedHepG2LIN28B
    SECPENSG00000047457.9chr3-148891444148891517148883732148883837148894036148894501-0.085000.000080.05578excludedHepG2LIN28B
    SEPIGPENSG00000185808.9chr21-384444443844461038441851384419243844473338444837-0.274000.000110.06485excludedHepG2LIN28B
    SEHM13ENSG00000101294.12chr20+301540123015409830149436301495393015692230156977-0.057000.000120.06879excludedHepG2LIN28B
    SETMBIM1ENSG00000135926.8chr2-219150485219150661219146662219146904219157188219157309-0.066000.000150.08182excludedHepG2LIN28B
    A3SSPDLIM7ENSG00000196923.9chr5-1769167711769170321769167711769168331769178701769179070.126000.000000.02263longerK562LIN28B
    A3SSEXO1ENSG00000174371.12chr1+2420353332420355802420353362420355802420301312420303570.099000.000010.03655longerK562LIN28B
    A3SSRMDN1ENSG00000176623.7chr8-8748704887487182874870488748714387489522874895530.109000.000030.04979longerK562LIN28B
    A3SSPMPCBENSG00000105819.9chr7+102944288102944487102944432102944487102940624102940754-0.137000.000010.03655shorterK562LIN28B
    A3SSAUP1ENSG00000115307.12chr2-747540677475424874754067747541867475437474754490-0.076000.000010.03655shorterK562LIN28B
    A3SSEEF1DENSG00000104529.13chr8-144662682144662927144662682144662802144663223144663324-0.062000.000020.03655shorterK562LIN28B
    RIILF3ENSG00000129351.13chr19+1079189410792868107918941079200510792668107928680.117000.000180.08428includedHepG2LIN28B
    RIRBM3ENSG00000102317.13chrX+4843394848434807484339484843405548434701484348070.061000.000180.08428includedHepG2LIN28B
    RINONOENSG00000147140.11chrX+7051768570518358705176857051778870518318705183580.075000.000110.07754includedHepG2LIN28B
    RIUSP14ENSG00000101557.10chr18+2099702104932099702100312103852104930.083000.000100.07754includedHepG2LIN28B
    RICPSF7ENSG00000149532.11chr11-6118313761183991611831376118325661183576611839910.138000.000010.01683includedHepG2LIN28B
    RIANKZF1ENSG00000163516.9chr2+220100731220101373220100731220100817220101043220101373-0.059000.000000.00659excludedHepG2LIN28B
    RIAP1G2ENSG00000213983.7chr14-240307202403162424030720240308442403117024031624-0.121000.000040.03909excludedHepG2LIN28B
    RINFKBIAENSG00000100906.6chr14-358715993587206535871599358718693587197635872065-0.053000.000030.03844excludedHepG2LIN28B
    RIRBM5ENSG00000003756.12chr3+501379645014059950137964501380385014051550140599-0.265000.000170.08428excludedHepG2LIN28B
    MXEGSTP1ENSG00000084207.11chr11+67351934673520416735215567352243673515956735164067352608673527120.100000.000420.021461includedK562LIN28B
    MXEGSTP1ENSG00000084207.11chr11+67351604673516406735215567352243673510656735131567352608673527120.123000.000110.007931includedK562LIN28B






    No RBPs affect the alternative splcing events of LIN28B on ENCORE database.





    No autoregularoty alternative splicing events between protein LIN28B and its RNA.