TRIM25

General Information

Gene Name       : TRIM25
Gene ID             : ENSG00000121060.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRIM25)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIM25ENSG00000121060.1760.2763.4461.86ENCSR000AEF
HepG2TRIM25ENSG00000121060.1750.1554.0752.11ENCSR985KAT
K562TRIM25ENSG00000121060.1731.8531.2231.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIM25 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIM25 RNA is bound by 43 proteins.  







eCLIP assay for TRIM25 is not avaliable on ENCORE database.





43 proteins are bound to TRIM25 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr175496874654968772-3'-UTR,intron-Distal5.3970828.72159HepG2LIN28B
chr175497892154978939-3'-UTR,CDS,intron-Distal4.094457.23632K562UCHL5
chr175496536354965462-3'-UTR,intron-Distal3.179597.19109HepG2LSM11
chr175497883054978936-3'-UTR,CDS,intron-Distal3.819223.37921HepG2UCHL5
chr175497291354972969-3'-UTR,CDS,intron-Distal,intron-Proximal4.6469925.28897K562U2AF2
chr175496649354966534-3'-UTR,intron-Distal4.389408.51603K562UPF1
chr175497326854973321-3'-UTR,CDS,intron-Distal,intron-Proximal3.281016.20918K562BUD13
chr175496581354965853-3'-UTR,intron-Distal4.110996.48274K562UPF1
chr175496915754969190-3'-UTR,CDS,intron-Distal3.849623.15006K562RBM15
chr175496817354968235-3'-UTR,intron-Distal3.678198.53091HepG2XPO5
chr175496880754968851-3'-UTR,intron-Distal,intron-Proximal4.599794.60263HepG2LIN28B
chr175496569554965740-3'-UTR,intron-Distal3.363176.98582K562UPF1
chr175496882254968927-3'-UTR,intron-Distal,intron-Proximal3.158404.85633HepG2G3BP1
chr175496934454969437-3'-UTR,CDS,intron-Distal,intron-Proximal3.827593.45225K562GRWD1
chr175496879354968807-3'-UTR,intron-Distal6.1103031.70929HepG2LIN28B
chr175496874754968773-3'-UTR,intron-Distal7.05428127.01070K562LIN28B
chr175496865854968766-3'-UTR,intron-Distal,intron-Proximal5.8857711.00768HepG2UPF1
chr175496752454967560-3'-UTR,intron-Distal3.621376.04024K562UPF1
chr175496880154968862-3'-UTR,intron-Distal,intron-Proximal4.4259718.04441K562UPF1
chr175496882254968906-3'-UTR,intron-Distal,intron-Proximal3.150497.96329K562UCHL5
chr175496782654967911-3'-UTR,intron-Distal,intron-Proximal3.053124.52956K562YBX3
chr175496574054965800-3'-UTR,intron-Distal4.2374610.38393K562UPF1
chr175496761654967714-3'-UTR,intron-Distal4.6679316.30441K562UPF1
chr175496559354965675-3'-UTR,intron-Distal3.090103.89757HepG2LSM11
chr175497292454972969-3'-UTR,CDS,intron-Distal,intron-Proximal3.5189112.84524HepG2U2AF2
chr175497638454976481-3'-UTR,CDS,intron-Distal,intron-Proximal4.0624820.27645HepG2PRPF8
chr175497884554978939-3'-UTR,CDS,intron-Distal3.206988.38419HepG2GRWD1
chr175496932254969404-3'-UTR,CDS,intron-Distal,intron-Proximal4.428594.48994K562RBM15
chr175496884654968911-3'-UTR,intron-Distal,intron-Proximal3.142043.84942HepG2CDC40
chr175497878054978845-3'-UTR,CDS,intron-Distal,intron-Proximal4.3991410.41018HepG2GRWD1
chr175496570354965784-3'-UTR,intron-Distal5.483697.41065K562ZC3H11A
chr175496879354968798-3'-UTR,intron-Distal7.5214792.55787K562LIN28B
chr175496880954968863-3'-UTR,intron-Distal,intron-Proximal4.2139214.23016HepG2UPF1
chr175496888554968917-3'-UTR,intron-Distal,intron-Proximal3.907036.02286HepG2PRPF4
chr175497646954976541-3'-UTR,CDS,intron-Distal,intron-Proximal3.917547.80656HepG2GRWD1
chr175496668254966720-3'-UTR,intron-Distal3.787413.15232HepG2LIN28B
chr175497325554973346-3'-UTR,CDS,intron-Distal,intron-Proximal4.682494.62947HepG2AQR
chr175496818954968278-3'-UTR,intron-Distal3.778713.97153HepG2UPF1
chr175496886354968914-3'-UTR,intron-Distal,intron-Proximal4.8640521.24485HepG2UPF1
chr175497322454973332-3'-UTR,CDS,intron-Distal,intron-Proximal4.560866.99120K562AQR
chr175496902854969093-3'-UTR,CDS,intron-Distal3.668624.45619HepG2UPF1
chr175496880354968920-3'-UTR,intron-Distal,intron-Proximal3.819387.10549K562FUS
chr175496879654968919-3'-UTR,intron-Distal,intron-Proximal3.116644.74718HepG2GTF2F1
chr175496881854968909-3'-UTR,intron-Distal,intron-Proximal4.327577.46349HepG2AKAP1
chr175497877854978943-3'-UTR,CDS,intron-Distal,intron-Proximal3.8067411.62673K562GRWD1
chr175497288154972904-3'-UTR,CDS,intron-Distal,intron-Proximal3.326244.41784HepG2GRWD1
chr175496886654968885-3'-UTR,intron-Distal,intron-Proximal4.425689.28502HepG2PRPF4
chr175496902954969102-3'-UTR,CDS,intron-Distal3.132543.87595K562RBM15
chr175496880554968830-3'-UTR,intron-Distal3.550555.64596K562LIN28B
chr175496883354968912-3'-UTR,intron-Distal,intron-Proximal3.488286.23582K562GTF2F1
chr175496680154966892-3'-UTR,intron-Distal4.6652620.42143K562UPF1
chr175497264554972713-3'-UTR,CDS,intron-Distal,intron-Proximal4.799319.76577HepG2PRPF8
chr175496833754968376-3'-UTR,intron-Distal5.247508.40676K562UPF1
chr175496882254968866-3'-UTR,intron-Distal,intron-Proximal4.970296.75874HepG2PRPF4
chr175496866354968732-3'-UTR,intron-Distal,intron-Proximal3.949096.16190HepG2AKAP1
chr175496536954965487-3'-UTR,intron-Distal3.073113.28107HepG2PABPN1
chr175497642854976482-3'-UTR,CDS,intron-Distal,intron-Proximal3.963793.96535HepG2AQR
chr175496560354965667-3'-UTR,intron-Distal4.029949.37242K562UPF1
chr175496886254968914-3'-UTR,intron-Distal,intron-Proximal4.9083618.86493K562UPF1
chr175496876454968801-3'-UTR,intron-Distal3.596926.04024K562UPF1
chr175496877254968793-3'-UTR,intron-Distal6.1629649.16330HepG2LIN28B
chr175496881154968916-3'-UTR,intron-Distal,intron-Proximal3.0600513.64528K562FAM120A
chr175497873954978819-3'-UTR,CDS,intron-Distal,intron-Proximal3.275107.44670HepG2PRPF8
chr175496877354968785-3'-UTR,intron-Distal7.37957133.95513K562LIN28B
chr175496881854968916-3'-UTR,intron-Distal,intron-Proximal3.086638.87021K562DDX6
chr175496879854968805-3'-UTR,intron-Distal7.4190886.31097K562LIN28B
chr175497267654972764-3'-UTR,CDS,intron-Distal,intron-Proximal3.144234.40420HepG2PPIG
chr175496878554968793-3'-UTR,intron-Distal7.39956134.14881K562LIN28B
chr175497325354973316-3'-UTR,CDS,intron-Distal,intron-Proximal3.624238.16971K562EFTUD2
chr175496880854968919-3'-UTR,intron-Distal,intron-Proximal4.9009717.50064HepG2NKRF
chr175498588554985936-5'-UTR,CDS,intron-Distal,intron-Proximal3.766533.40427K562U2AF1
chr175499131354991388-5'-UTR,CDS,intron-Distal3.158876.63166HepG2DDX3X
chr175498172754981812-5'-UTR,CDS,intron-Distal,intron-Proximal4.5018413.06301K562UCHL5
chr175498162954981719-5'-UTR,CDS,intron-Distal,intron-Proximal4.314709.28811HepG2GRWD1
chr175498581854985876-5'-UTR,CDS,intron-Distal,intron-Proximal3.359804.25541HepG2GRWD1
chr175499117354991380-5'-UTR,CDS,intron-Distal3.033304.43306HepG2UCHL5
chr175498165854981723-5'-UTR,CDS,intron-Distal,intron-Proximal3.843604.68902HepG2PPIG
chr175498590254985936-5'-UTR,CDS,intron-Distal,intron-Proximal4.159227.40701K562U2AF2
chr175499131154991380-5'-UTR,CDS,intron-Distal4.153927.06029HepG2GRWD1
chr175499131554991374-5'-UTR,CDS,intron-Distal3.873085.38772K562RBM15
chr175498589254985989-5'-UTR,CDS,intron-Distal,intron-Proximal5.8119111.49904K562SF3B4
chr175498161254981711-5'-UTR,CDS,intron-Distal,intron-Proximal4.2273112.72091K562UCHL5
chr175498161354981805-5'-UTR,CDS,intron-Distal,intron-Proximal3.880985.91267K562TRA2A
chr175498161654981705-5'-UTR,CDS,intron-Distal,intron-Proximal3.534783.80897HepG2FXR2
chr175498171954981806-5'-UTR,CDS,intron-Distal,intron-Proximal3.123855.20111HepG2GRWD1
chr175498578154985858-5'-UTR,CDS,intron-Distal,intron-Proximal4.2102610.64040HepG2PRPF8
chr175499094254990990-CDS,intron-Distal4.086346.70275K562RBM15
chr175499068454990791-CDS,intron-Distal3.7858514.65016HepG2PRPF8
chr175499087654990942-CDS,intron-Distal,intron-Proximal4.341378.37444K562RBM15
chr175499116454991224-CDS,intron-Distal3.789245.74979HepG2GRWD1
chr175499075254990841-CDS,intron-Distal,intron-Proximal3.203436.73967K562ZNF622
chr175499126654991313-CDS,intron-Distal4.171314.15208K562RBM15
chr175499067554990770-CDS,intron-Distal3.528433.67894HepG2AQR
chr175499076154990852-CDS,intron-Distal,intron-Proximal4.5586216.97670K562RBM15
chr175497043254970546-intron-Distal3.882388.53937HepG2PCBP2
chr175497469554974786-intron-Distal4.005126.67731HepG2PRPF4
chr175497222254972337-intron-Distal3.155874.90594K562HNRNPK
chr175497340154973426-intron-Distal,intron-Proximal3.086204.64757K562KHSRP
chr175497336454973376-intron-Distal,intron-Proximal4.210039.53244K562KHSRP
chr175497331654973364-intron-Distal,intron-Proximal4.042238.67954K562KHSRP
chr175497210754972181-intron-Distal3.154714.48153HepG2HNRNPK
chr175497296954972979-intron-Distal,intron-Proximal4.0536111.80824HepG2U2AF2
chr175497229354972376-intron-Distal4.049863.18939HepG2RBFOX2
chr175497319954973261-intron-Distal,intron-Proximal4.976196.35567HepG2PRPF8
chr175497223854972317-intron-Distal3.771195.00478HepG2PCBP2
chr175496995954970071-intron-Distal5.475929.37109K562EIF4G2
chr175497522754975350-intron-Distal4.222655.13332K562FUS
chr175497543554975579-intron-Distal4.412064.21977HepG2HNRNPL
chr175497470054974748-intron-Distal3.255783.69481K562UCHL5
chr175497239954972510-intron-Distal3.747354.78196HepG2PTBP1
chr175497213554972222-intron-Distal3.966863.34627K562HNRNPK
chr175499074454990753-intron-Distal3.511098.77060K562AQR
chr175497033054970448-intron-Distal4.083307.79655HepG2PTBP1
chr175497296954972978-intron-Distal,intron-Proximal4.7766133.13802K562U2AF2
chr175497033254970414-intron-Distal4.830324.90095K562PTBP1
chr175497323154973268-intron-Distal,intron-Proximal4.265504.11693K562BUD13
chr175497646654976476-intron-Distal,intron-Proximal3.284266.12169K562AQR
chr175499067554990735-intron-Distal3.059123.46049K562RBM15
chr175497467054974743-intron-Distal3.268305.82536K562CSTF2T
chr175499067454990744-intron-Distal3.7845912.43406K562AQR
chr175497318354973260-intron-Distal,intron-Proximal3.767095.45902K562TIA1
chr175497223754972342-intron-Distal3.604366.54075HepG2HNRNPK
chr175497492254975006-intron-Distal3.078546.87382HepG2PRPF4
chr175496966554969756-intron-Distal,intron-Proximal5.484467.55693K562EIF4G2
chr175497014454970223-intron-Distal3.492663.20028K562TARDBP
chr175497237654972440-intron-Distal3.658978.06625HepG2RBFOX2
chr175497468954974750-intron-Distal3.561124.74378HepG2GTF2F1
chr175499067254990739-intron-Distal5.533457.41664HepG2EFTUD2
chr175497468054974740-intron-Distal4.733773.19125K562GTF2F1
chr175497542654975563-intron-Distal5.5080513.60200K562HNRNPL
chr175497490854974980-intron-Distal4.284853.58513HepG2GTF2F1
chr175497001254970137-intron-Distal4.433743.87294K562TARDBP
chr175498594454986058-intron-Distal,intron-Proximal3.669334.79829K562EFTUD2
chr175497478654974855-intron-Distal3.502025.18989HepG2PRPF4
chr175497223954972341-intron-Distal4.381646.57521HepG2DDX59
chr175497642754976457-intron-Distal,intron-Proximal3.956638.23725K562AQR
chr175497469354974755-intron-Distal3.227445.40194HepG2FAM120A
chr175497522654975261-intron-Distal3.205333.25653K562CSTF2T
chr175497210754972175-intron-Distal4.056624.60998HepG2PCBP2
chr175497317254973283-intron-Distal,intron-Proximal3.6616110.61622K562PRPF8
chr175497489654974978-intron-Distal3.948853.56021K562HNRNPA1
chr175497298454973047-intron-Distal,intron-Proximal3.739726.26407K562SF3B4
chr175497282954972860-intron-Distal,intron-Proximal5.376856.03057K562EFTUD2
chr175497337654973401-intron-Distal,intron-Proximal3.350005.62143K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIM25 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIM25 is not available on ENCORE database.

  • 96 RBPs can affect the levels of TRIM25.  








The Knockdown/knockout RNA-Seq assay for TRIM25 is not available on ENCORE database.





96 RBPs can affect the gene expression of TRIM25 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIM25ENSG00000121060.102353.003703427.26450-0.542604.927304.24470HepG2AKAP1
TRIM25ENSG00000121060.101519.323502279.62110-0.585405.494704.15850HepG2BCCIP
TRIM25ENSG00000121060.101552.219001980.75860-0.351702.418001.57890HepG2BCLAF1
TRIM25ENSG00000121060.102002.426102471.28180-0.303502.571101.99140HepG2BOP1
TRIM25ENSG00000121060.102262.729401895.090800.255702.182001.38170HepG2DDX24
TRIM25ENSG00000121060.102202.304402820.31420-0.356802.443701.86020HepG2DDX6
TRIM25ENSG00000121060.101262.039901855.62940-0.5562010.106208.82950HepG2DNAJC21
TRIM25ENSG00000121060.101468.134501839.21120-0.325105.517004.64250HepG2DNAJC2
TRIM25ENSG00000121060.10984.895601410.36300-0.518004.133903.04390HepG2EIF3D
TRIM25ENSG00000121060.101495.013001828.83820-0.290802.671301.60880HepG2EIF3G
TRIM25ENSG00000121060.102169.268902917.16010-0.427402.656701.98170HepG2EIF4B
TRIM25ENSG00000121060.102517.280403106.32260-0.303304.994203.92390HepG2EIF4G1
TRIM25ENSG00000121060.102015.167104084.80350-1.0194046.2921044.39530HepG2ETF1
TRIM25ENSG00000121060.103070.970202309.131600.411205.074003.94680HepG2EWSR1
TRIM25ENSG00000121060.101445.085201758.95340-0.283602.187801.48130HepG2FUBP3
TRIM25ENSG00000121060.101440.592802804.20860-0.9609014.5929013.12370HepG2G3BP1
TRIM25ENSG00000121060.101861.015702256.08120-0.277703.833202.69730HepG2HDGF
TRIM25ENSG00000121060.102443.364602893.76790-0.244103.259002.25550HepG2HNRNPA2B1
TRIM25ENSG00000121060.101390.674502083.80750-0.583407.626706.52170HepG2HNRNPC
TRIM25ENSG00000121060.101818.959702839.78960-0.642708.949807.74930HepG2HNRNPK
TRIM25ENSG00000121060.102267.021002868.44560-0.339507.741606.66350HepG2HNRNPL
TRIM25ENSG00000121060.101811.748402070.03150-0.192302.053101.52150HepG2HNRNPU
TRIM25ENSG00000121060.101975.652002850.37500-0.528805.545404.62020HepG2IGF2BP2
TRIM25ENSG00000121060.101609.102202114.47040-0.394008.258007.05690HepG2ILF2
TRIM25ENSG00000121060.101829.065102160.16140-0.240003.523202.37300HepG2KIF1C
TRIM25ENSG00000121060.102217.910303105.13190-0.485503.654402.70150HepG2LARP4
TRIM25ENSG00000121060.102288.252703040.99990-0.410303.131502.46400HepG2MATR3
TRIM25ENSG00000121060.101801.512202503.21100-0.474602.825301.84760HepG2MTPAP
TRIM25ENSG00000121060.101422.697701820.12280-0.355403.272701.94730HepG2NAA15
TRIM25ENSG00000121060.102596.237503122.38740-0.266203.107502.30070HepG2NOL12
TRIM25ENSG00000121060.101616.424302176.20230-0.429004.346003.41400HepG2NSUN2
TRIM25ENSG00000121060.104182.191101451.060301.5271018.7703016.42980HepG2PABPC1
TRIM25ENSG00000121060.101149.323502048.99020-0.8341024.4100022.39280HepG2PARN
TRIM25ENSG00000121060.101320.124601846.30450-0.484007.749406.56620HepG2PPIL4
TRIM25ENSG00000121060.103780.150002980.521400.342803.537402.87430HepG2PUF60
TRIM25ENSG00000121060.102143.236703161.61270-0.5609010.511109.25090HepG2PUM2
TRIM25ENSG00000121060.102098.112102972.39620-0.502508.910507.88670HepG2QKI
TRIM25ENSG00000121060.103641.897502093.432000.798705.814104.81740HepG2RAVER1
TRIM25ENSG00000121060.102130.339602801.44630-0.395105.214304.08250HepG2RBM15
TRIM25ENSG00000121060.104668.802803414.116700.451403.957403.36630HepG2RBM22
TRIM25ENSG00000121060.101779.950602697.63990-0.599909.732308.52470HepG2RBM25
TRIM25ENSG00000121060.101926.320102418.32870-0.328202.560801.60970HepG2RBM27
TRIM25ENSG00000121060.102464.174603054.39970-0.309804.918104.23260HepG2NELFE
TRIM25ENSG00000121060.102203.817902844.75690-0.368306.659605.76270HepG2RECQL
TRIM25ENSG00000121060.101426.796401843.46090-0.369606.343005.42750HepG2SAFB2
TRIM25ENSG00000121060.101055.066301501.03530-0.508603.682002.17840HepG2SART3
TRIM25ENSG00000121060.101885.185102429.11500-0.365703.413302.63670HepG2SF3B1
TRIM25ENSG00000121060.102271.591602857.41210-0.331005.524604.73800HepG2SF3B4
TRIM25ENSG00000121060.101886.595902149.79760-0.188402.444001.83430HepG2SMN1
TRIM25ENSG00000121060.101312.161502135.17380-0.702406.102704.63540HepG2SMNDC1
TRIM25ENSG00000121060.105995.867003856.078400.6367025.8438024.71520HepG2SRFBP1
TRIM25ENSG00000121060.104414.707602982.519000.5657018.0103017.02480HepG2SRSF1
TRIM25ENSG00000121060.101984.800702613.91670-0.397202.683701.69910HepG2SRSF3
TRIM25ENSG00000121060.104029.844803347.917700.267404.446103.82780HepG2SSB
TRIM25ENSG00000121060.101790.272202231.20570-0.317602.119701.51740HepG2SUPV3L1
TRIM25ENSG00000121060.102250.371902680.80260-0.252502.890702.31850HepG2TAF15
TRIM25ENSG00000121060.101926.147502463.29420-0.354903.965002.97140HepG2TIA1
TRIM25ENSG00000121060.101475.750902102.22070-0.510503.313501.71600HepG2TRA2A
TRIM25ENSG00000121060.101691.123102029.40040-0.263103.390602.78040HepG2TRIM56
TRIM25ENSG00000121060.103520.017602291.023100.619508.544107.43620HepG2U2AF1
TRIM25ENSG00000121060.101515.019402042.98880-0.431302.422201.48750HepG2UPF2
TRIM25ENSG00000121060.103246.804102712.006600.259603.487402.32610HepG2UTP18
TRIM25ENSG00000121060.101398.188002196.37860-0.651607.851806.64210HepG2XRN2
TRIM25ENSG00000121060.101362.049602013.67180-0.5640014.3931013.05570HepG2ZC3H8
TRIM25ENSG00000121060.101476.552602091.73810-0.502503.466602.00720HepG2ZRANB2
TRIM25ENSG00000121060.102179.908702795.56050-0.358906.336505.52970K562AGGF1
TRIM25ENSG00000121060.102431.082202908.88150-0.258902.109801.53630K562AKAP8L
TRIM25ENSG00000121060.102611.595603052.06790-0.224902.379701.53710K562ATP5C1
TRIM25ENSG00000121060.101836.780901294.002800.505204.991803.80570K562BOP1
TRIM25ENSG00000121060.102696.893403340.93240-0.309003.565902.20200K562CCDC124
TRIM25ENSG00000121060.102437.696101375.823700.8251017.2748015.29640K562CPSF6
TRIM25ENSG00000121060.104689.084503895.253900.267503.056502.03390K562CELF1
TRIM25ENSG00000121060.101292.891501568.21180-0.278503.035201.64290K562DDX27
TRIM25ENSG00000121060.101154.715301761.39630-0.609205.133103.36240K562EEF2
TRIM25ENSG00000121060.103130.761902097.378700.5778013.2615011.86910K562EIF2S2
TRIM25ENSG00000121060.101371.971801822.06040-0.409302.846501.79700K562EIF3D
TRIM25ENSG00000121060.101106.890901533.92370-0.470706.626805.40900K562EIF3G
TRIM25ENSG00000121060.101416.814001830.73070-0.369803.265202.34070K562FIP1L1
TRIM25ENSG00000121060.102617.618401400.008400.9027016.0490013.92120K562FMR1
TRIM25ENSG00000121060.101598.236501186.694400.429403.382102.36380K562FTO
TRIM25ENSG00000121060.101515.447401793.05860-0.242702.532701.94820K562FXR1
TRIM25ENSG00000121060.101869.976301313.515100.509505.991104.82260K562GPKOW
TRIM25ENSG00000121060.10939.930201505.84380-0.679906.940105.36300K562HNRNPM
TRIM25ENSG00000121060.102563.404803087.14120-0.268202.367001.61250K562KIF1C
TRIM25ENSG00000121060.102100.772201121.730100.9051010.201608.28340K562KRR1
TRIM25ENSG00000121060.101554.217402091.47490-0.428304.857403.73590K562MAGOH
TRIM25ENSG00000121060.102408.707202955.08000-0.294902.509601.50150K562MAK16
TRIM25ENSG00000121060.101750.877502087.20310-0.253502.149301.34690K562MATR3
TRIM25ENSG00000121060.101856.056301282.161800.533606.749305.34850K562METAP2
TRIM25ENSG00000121060.103117.340202197.732500.504202.933601.65850K562PABPC1
TRIM25ENSG00000121060.104147.308403255.181900.349304.638102.83630K562PNPT1
TRIM25ENSG00000121060.101605.969202032.01300-0.339503.498202.76230K562PTBP1
TRIM25ENSG00000121060.102004.622202884.99800-0.525206.198105.42450K562PUS1
TRIM25ENSG00000121060.102048.301602810.84200-0.456607.590506.63800K562RBM15
TRIM25ENSG00000121060.101515.555302050.35550-0.436003.984302.63850K562NELFE
TRIM25ENSG00000121060.101222.859201510.70530-0.305004.024502.13110K562RPS10
TRIM25ENSG00000121060.101211.963301686.83780-0.477003.685702.73970K562RPS19
TRIM25ENSG00000121060.101390.511001835.85410-0.400803.150502.07290K562RPS3
TRIM25ENSG00000121060.102749.978002169.761600.341804.920503.85990K562SF3A3
TRIM25ENSG00000121060.102147.907501249.410800.781609.490107.60720K562SF3B1
TRIM25ENSG00000121060.101121.819402222.97010-0.9866040.2260037.48720K562SRPK2
TRIM25ENSG00000121060.102455.461801992.071500.301602.933502.20870K562SRSF1
TRIM25ENSG00000121060.101796.874901526.002900.235602.023801.33760K562U2AF2
TRIM25ENSG00000121060.104797.475903897.116100.299803.015601.54710K562UBE2L3
TRIM25ENSG00000121060.102795.470902331.521300.261703.841203.00650K562UPF1
TRIM25ENSG00000121060.101745.325402074.59200-0.249303.428802.49420K562WDR43
TRIM25ENSG00000121060.103408.480002800.378500.283402.471601.66400K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIM25 is not available on ENCORE database.





8 RBPs can affect the splicing of TRIM25 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRIM25ENSG00000121060.10chr17-5498610754986238549858285498592454990752549913880.120000.000000.00010includedK562WDR3
SETRIM25ENSG00000121060.10chr17-549858285498592454981615549818495499075254991388-0.053000.006260.09024excludedHepG2U2AF1
SETRIM25ENSG00000121060.10chr17-5498610754986238549858285498592454990752549913880.184000.000000.00002includedK562AQR
SETRIM25ENSG00000121060.10chr17-549728815497296554972703549728025497328654973313-0.061000.003970.03851excludedK562AQR
SETRIM25ENSG00000121060.10chr17-5498610754986238549858285498592454990752549913880.120000.000000.00004includedK562NSUN2
SETRIM25ENSG00000121060.10chr17-5498610754986238549858285498592454990752549913880.135000.000360.02338includedK562EFTUD2
SETRIM25ENSG00000121060.10chr17-549732865497331354972881549729655497647554976541-0.187000.000230.01201excludedK562TARDBP
SETRIM25ENSG00000121060.10chr17-549731055497331354972881549729655497647554976541-0.085000.000170.00676excludedK562RBM15
A3SSTRIM25ENSG00000121060.10chr17-5496947254969664549694725496959054972703549728020.061000.000750.00536longerK562AQR
A5SSTRIM25ENSG00000121060.10chr17-5497310554973313549732865497331354972881549729650.055000.001110.06877longerHepG2HNRNPK
RITRIM25ENSG00000121060.10chr17-5497288154973135549728815497296554973105549731350.161000.009570.07663includedHepG2U2AF1
RITRIM25ENSG00000121060.10chr17-5497270354972943549727035497280254972881549729430.169000.000000.00000includedK562AQR
MXETRIM25ENSG00000121060.10chr17-5498161554981849549858285498592454976475549765415499075254991399-0.094000.001110.023202includedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRIM25 is not avaliable on ENCORE database.