SAFB2

General Information

Gene Name       : SAFB2
Gene ID             : ENSG00000130254.11
Essential Gene : No

Functions

Localization(RBPImage: SAFB2)

Domains (AlphaFold: SAFB2)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SAFB2ENSG00000130254.1133.6033.7833.69ENCSR000AEF
HepG2SAFB2ENSG00000130254.1148.4841.4744.97ENCSR985KAT
K562SAFB2ENSG00000130254.1130.5636.8733.71ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 267ENCSR943MHUSAFB2K562ReleasedENCAB303CHKENCSR978JXM  
knockdown followed by RNA-seq SAFB2-BGKLV24-K562ENCSR770LYWSAFB2K562ReleasedENCSR154OBA   shRNAKD% = 60.1,68.9
knockdown followed by RNA-seq SAFB2-BGHLV20-HepG2ENCSR110ZYDSAFB2HepG2ReleasedENCSR305XWT   shRNAKD% = 71.0,73.8
RNA Bind-n-SeqRBNS: SAFB2ENCSR558RBKSAFB2cell-free sampleReleasedENCSR537ATS  






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
SAFB2267K562ENCSR943MHUENCSR978JXMENCAB303CHKA301-112A1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
SAFB2ENCAB303CHKA301-112A1Released, ENCODE3BGHLV20-53, Released, ENCODE3BGKLV24-51, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SAFB2K562shRNAENCSR770LYWENCSR154OBASAFB2_BGKLV24-51C,SAFB2_BGKLV24-52CNT_BGKLV24-1C,NT_BGKLV24-2C60.1,68.9ReleasedENCODE3
SAFB2HepG2shRNABGHLV16-49,BGHLV16-50BGHLV16-1,BGHLV16-2NotSatisfiedENCODE3
SAFB2HepG2shRNABGHLV17-27,BGHLV17-28BGHLV17-1,BGHLV17-2NotSatisfiedENCODE3
SAFB2HepG2shRNAENCSR110ZYDENCSR305XWTSAFB2-57-BGHLV20-53_17734,SAFB2-57-BGHLV20-54_17735non-target-BGHLV20-1_17706,non-target-BGHLV20-2_1770771.0,73.8ReleasedENCODE3


  RNA Bind-n-Seqn  
  GeneName    gene_aliases    Status    Project    Note  
SAFB2SAFB2ReleasedENCODE4


  Localization Image in HepG2  
    SAFB2: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Speckles
  • Cytoplasm
  • Nuclear release mitosis












  • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    SAFB2Product_ID: A301-112A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: SAFB2-human
    SAFB2-HEPG2.png<br>Caption: Western blot following shRNA against SAFB2 in HepG2 whole cell lysate using SAFB2 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against SAFB2. SAFB2 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
    K562_Bethyl_A301-112_1_SAFB2.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using SAFB2 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-SAFB2 antibody (lanes under 'SAFB2').
    SAFB2-K562.png<br>Caption: Western blot following shRNA against SAFB2 in K562 whole cell lysate using SAFB2 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against SAFB2. SAFB2 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








    RNA Targets

    • SAFB2 protein binds to 3,582 RNA regions.  




    • The binding motifs of SAFB2

    • Trulli

    Proteins bound to RNA

    • SAFB2 RNA is bound by 34 proteins.  






    SAFB2 protein has 3,582 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 3,582 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    SAFB2chr74374476743744834-3.552045.73368K562COA1intron-Distal
    SAFB2chr168943388389434025-3.609679.21831K562ANKRD11intron-Distal
    SAFB2chr154464782344647917+3.839013.19638K562CASC4intron-Distal
    SAFB2chr89149363091493785+4.9950817.28254K562LINC00534intron-Distal
    SAFB2chr224993303949933103-3.778016.58867K562C22orf34intron-Distal
    SAFB2chr52900218729002295+3.384629.30691K562SUCLG2P4intron-Distal,intron-Proximal
    SAFB2chr1246418413246418535-3.713966.73902K562SMYD3intron-Distal
    SAFB2chr12201014622010220-3.366954.70071K562USP48intron-Distal
    SAFB2chr89386407993864184-3.849436.96497K562RP11-100L22.2intron-Distal
    SAFB2chr7119526255119526341-5.8242416.21225K562RP11-328J2.1intron-Distal
    SAFB2chr221753558917535631+3.000575.98870K562CECR7intron-Distal
    SAFB2chr5104674714104674779-4.325004.58306K562RP11-6N13.1intron-Distal
    SAFB2chr104956047949560574+5.1618310.39744K562MAPK8intron-Distal
    SAFB2chr19722137997221489+3.724466.16438K562PTBP2intron-Distal
    SAFB2chr224990306049903178-3.370279.07047K562C22orf34intron-Distal
    SAFB2chr10133763768133763871+3.419125.10467K562PPP2R2Dintron-Distal
    SAFB2chr2168768153168768230-3.568799.41330K562AC016723.4intron-Distal
    SAFB2chr111193159111931673+4.438326.03465K562USP47intron-Distal
    SAFB2chr213943640039436427-3.313053.46712K562DSCR4intron-Distal
    SAFB2chr21270287312702971+3.111723.95154K562AC096559.1intron-Distal
    SAFB2chr127453042174530491-3.285324.48636K562RP11-81H3.2intron-Distal
    SAFB2chr135106076951060881+3.234283.46712K562DLEU1intron-Distal
    SAFB2chr1176094988176095053-3.761503.43228K562RFWD2intron-Distal
    SAFB2chr6119651417119651519-3.826153.12651K562MAN1A1intron-Distal
    SAFB2chr6170695252170695299+3.809943.65589K562FAM120Bintron-Distal
    SAFB2chr6147690251147690298+4.569956.48449K562STXBP5intron-Distal
    SAFB2chr1754544555454542-3.876983.19638K562NLRP1intron-Distal
    SAFB2chr7102526277102526467-4.391773.84033K562FBXL13intron-Distal
    SAFB2chr119604653996046677-3.838263.50894K562MAML2intron-Distal
    SAFB2chr155826840258268499-3.026183.06830K562ALDH1A2intron-Distal
    SAFB2chr33736846137368580+3.7927314.69396K562GOLGA4CDS,intron-Distal
    SAFB2chr4755827755934+3.109673.34630K562PCGF3intron-Distal
    SAFB2chr89378561193785667-3.946124.07784K562RP11-100L22.2intron-Distal
    SAFB2chr213940915939409228-3.291753.87218K562DSCR4intron-Distal
    SAFB2chr139299095892991099+4.050508.01942K562GPC5intron-Distal
    SAFB2chr124679465346794767+4.434394.95197K562RP11-96H19.1intron-Distal
    SAFB2chr187568946675689518-4.7232630.29418K562LINC01029intron-Distal
    SAFB2chr89127497491274993+3.371983.73364K562LINC00534intron-Distal
    SAFB2chr162071970420719774+3.322703.67498K562ACSM3intron-Distal
    SAFB2chr213945922939459309-3.492433.87218K562DSCR4intron-Distal
    SAFB2chr11625521816255294+3.252377.33351K562SPENCDS
    SAFB2chr111430444614304553-3.026183.06830K562RRAS2intron-Distal
    SAFB2chr3196838487196838563-3.583433.12651K562DLG1intron-Distal
    SAFB2chr93755691037557003-3.974643.12651K562RP11-613M10.8, FBXO10intron-Distal
    SAFB2chr6148088535148088598+3.221164.48636K562RP11-307P5.1intron-Distal
    SAFB2chr111300258513002662-3.602428.55178K562LINC00958intron-Distal
    SAFB2chr7119432120119432137-3.906267.60069K562RP11-328J2.1intron-Distal
    SAFB2chr1246283617246283735-3.075376.17288K562SMYD3intron-Distal
    SAFB2chr9140691587140691671+3.790953.54264K562EHMT1intron-Distal
    SAFB2chr36045523960455329-3.778013.19638K562FHITintron-Distal
    SAFB2chr2236697174236697297+3.483285.56248K562AGAP1intron-Distal
    SAFB2chr155827141958271477-3.705993.22483K562ALDH1A2intron-Distal
    SAFB2chrX123623742123623831-3.156654.14200K562TENM1intron-Distal
    SAFB2chr224818511348185190+4.738607.76000K562RP11-191L9.4intron-Distal
    SAFB2chr127452710574527164-3.970903.95960K562RP11-81H3.2intron-Distal
    SAFB2chr178023070180230775-4.641424.56270K562CSNK1Dintron-Distal
    SAFB2chr7102547501102547585-3.438983.87218K562FBXL13intron-Distal
    SAFB2chr162394917123949284+6.2081320.91332K562PRKCBintron-Distal
    SAFB2chr78749533187495398-3.883363.50894K562SLC25A40intron-Distal
    SAFB2chr152564625725646319-3.638953.12651K562UBE3Aintron-Distal
    SAFB2chrX137919359137919428-3.911703.65589K562FGF13intron-Distal
    SAFB2chr7140531408140531495-5.063949.89378K562BRAFintron-Distal
    SAFB2chr7120896353120896391+4.026183.33164K562CPED1intron-Distal
    SAFB2chr1180731738180731801+3.705993.22483K562XPR1intron-Distal
    SAFB2chrX1571879115718856+3.605533.01412K562CA5B, CA5BP1intron-Distal
    SAFB2chr74367187443671945-4.590356.68923K562COA13'-UTR,intron-Distal
    SAFB2chr1154614835461545-4.587166.44643K562AC104389.28, HBG2, HBE1intron-Distal
    SAFB2chr214621885246218906-4.266085.16344K562UBE2G2intron-Distal
    SAFB2chr72264959722649695-4.042207.86445K562STEAP1B, AC002480.5intron-Distal
    SAFB2chr203361375633613816-3.919123.22483K562TRPC4APintron-Distal
    SAFB2chr99499945894999523-3.154075.53952K562IARSintron-Distal
    SAFB2chr211542323315423282+3.659433.22483K562AP001347.6intron-Distal
    SAFB2chr33358806933588173-4.624966.25977K562CLASP2intron-Distal
    SAFB2chr6147686868147686898+3.906263.74251K562STXBP5intron-Distal
    SAFB2chr87464412774644176-3.053433.75707K562RP11-463D19.2, STAU2intron-Distal
    SAFB2chr72268712222687177-3.549525.49916K562AC002480.5intron-Distal
    SAFB2chr7119346607119346624-4.2989219.54407K562RP11-328J2.1intron-Distal
    SAFB2chr213461135934611411+3.422475.13780K562IFNAR2intron-Distal
    SAFB2chrX113136929113136996-3.422473.55860K562RP5-964N17.1intron-Distal
    SAFB2chr1246284126246284243-3.388437.18036K562SMYD3intron-Distal
    SAFB2chrX7321981573219890+3.778013.19638K562JPXintron-Distal
    SAFB2chr221753545117535542+4.0859811.58826K562CECR7intron-Distal
    SAFB2chr9140628243140628342+3.928457.81859K562EHMT1intron-Distal
    SAFB2chr6147619909147619978+3.190837.83248K562STXBP5intron-Distal
    SAFB2chr3196645852196645912+4.109674.72697K562SENP5intron-Distal
    SAFB2chr6163891941163892023+4.430115.16344K562QKIintron-Distal
    SAFB2chr2109087923109087999+3.410344.08075K562GCC25'-UTR,CDS
    SAFB2chr1154781485478180-3.637714.90935K562HBG2, AC104389.28, HBE1intron-Distal
    SAFB2chr204826399648264092-3.971524.16015K562B4GALT5intron-Distal
    SAFB2chr116447621644881-4.785927.10192K562CDK11A, RP1-283E3.8intron-Distal
    SAFB2chr7102546245102546307-3.050643.26524K562FBXL13intron-Distal
    SAFB2chr7119437139119437239-3.5178017.00979K562RP11-328J2.1intron-Distal
    SAFB2chrX106322516106322591-3.149753.75707K562RBM41intron-Distal
    SAFB2chr77622473076224794+4.6930812.61905K562UPK3B, AC004980.7intron-Distal
    SAFB2chr515813941581553-3.045023.46712K562SDHAP3intron-Distal
    SAFB2chr224816217548162256+3.466514.90935K562RP11-191L9.4intron-Distal
    SAFB2chr211118290311182946+3.034434.31055K562AP003900.6intron-Distal
    SAFB2chr135285791152857998-3.917783.86679K562RP11-248G5.8, TPTE2P2intron-Distal
    SAFB2chr175832003658320134-4.370195.81661K562USP32intron-Distal
    SAFB2chr2178240534178240638-4.391075.63023K562AC074286.1, NFE2L2intron-Distal




    34 proteins are bound to SAFB2 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr1956119155611985-3'-UTR,intron-Distal4.652285.59408HepG2GRWD1
    chr1956047975604806-3'-UTR,CDS,intron-Distal,intron-Proximal4.265144.02380K562TRA2A
    chr1956134755613535-3'-UTR,CDS,intron-Distal,intron-Proximal3.0612715.13612K562ZNF622
    chr1956164525616493-3'-UTR,CDS,intron-Distal4.4005318.30835K562UCHL5
    chr1956123615612468-3'-UTR,intron-Distal,intron-Proximal4.2602721.72283K562KHSRP
    chr1955988025598848-3'-UTR,CDS,intron-Distal,intron-Proximal3.135628.40002K562GRWD1
    chr1956124515612493-3'-UTR,intron-Distal,intron-Proximal3.969064.36481K562EFTUD2
    chr1955988485598896-3'-UTR,CDS,intron-Distal,intron-Proximal3.016239.42017K562GRWD1
    chr1956001935600219-3'-UTR,CDS,intron-Distal,intron-Proximal4.431524.01763HepG2GRWD1
    chr1956161505616211-3'-UTR,CDS,intron-Distal3.1533210.93472K562ZNF622
    chr1956164315616497-3'-UTR,CDS,intron-Distal,intron-Proximal4.2713718.28804K562TRA2A
    chr1956001545600247-3'-UTR,CDS,intron-Distal,intron-Proximal3.367257.86366HepG2BUD13
    chr1956001955600265-3'-UTR,CDS,intron-Distal,intron-Proximal3.692414.17990K562CPSF6
    chr1956124035612501-3'-UTR,intron-Distal,intron-Proximal4.4075416.17397K562PRPF8
    chr1956164655616513-3'-UTR,CDS,intron-Distal,intron-Proximal3.538507.17119K562SF3B4
    chr1956125665612579-3'-UTR,CDS,intron-Distal,intron-Proximal3.466799.80632K562UCHL5
    chr1956046015604639-3'-UTR,CDS,intron-Distal4.025753.22063K562TRA2A
    chr1956046565604705-3'-UTR,CDS,intron-Distal,intron-Proximal4.664995.64533K562TRA2A
    chr1956161575616257-3'-UTR,CDS,intron-Distal3.734834.39088K562SRSF1
    chr1956134755613511-3'-UTR,CDS,intron-Distal,intron-Proximal4.0306413.63763K562UCHL5
    chr1956002185600267-3'-UTR,CDS,intron-Distal,intron-Proximal3.232946.69056K562GRWD1
    chr1956119155611985-3'-UTR,intron-Distal4.428575.65086HepG2BCLAF1
    chr1956047995604851-3'-UTR,CDS,intron-Distal,intron-Proximal4.2260115.71803K562UCHL5
    chr1956124885612500-3'-UTR,intron-Distal,intron-Proximal5.2073717.74778K562KHSRP
    chr1956121335612198-3'-UTR,intron-Distal3.501387.09919K562RBM15
    chr1956048925604948-3'-UTR,CDS,intron-Distal,intron-Proximal3.6864519.35173K562ZNF622
    chr1955988005598844-3'-UTR,CDS,intron-Distal,intron-Proximal4.1052511.39909K562ZNF622
    chr1955988055598897-3'-UTR,CDS,intron-Distal,intron-Proximal3.032485.33786HepG2ZNF800
    chr1956120205612102-3'-UTR,intron-Distal3.302145.27152HepG2BCLAF1
    chr1956124225612507-3'-UTR,intron-Distal,intron-Proximal3.343575.18255HepG2HLTF
    chr1956048935604944-3'-UTR,CDS,intron-Distal3.4177211.77736K562UCHL5
    chr1956162565616304-3'-UTR,CDS,intron-Distal,intron-Proximal3.3664710.05549K562UCHL5
    chr1956135175613539-3'-UTR,CDS,intron-Distal,intron-Proximal3.270366.31407K562PUM1
    chr1956001425600216-3'-UTR,CDS,intron-Distal,intron-Proximal5.9590614.58803K562TRA2A
    chr1956125665612578-3'-UTR,CDS,intron-Distal,intron-Proximal3.401006.81129K562GRWD1
    chr1956124545612499-3'-UTR,intron-Distal,intron-Proximal3.601345.52031HepG2GRWD1
    chr1956048935604947-3'-UTR,CDS,intron-Distal4.341539.94686HepG2GRWD1
    chr1956161465616201-3'-UTR,CDS,intron-Distal3.767634.51666K562RBM15
    chr1956124405612481-3'-UTR,intron-Distal,intron-Proximal3.797626.10049K562TIA1
    chr1955988675598895-3'-UTR,CDS,intron-Distal4.8521020.48860K562UCHL5
    chr1956124815612494-3'-UTR,intron-Distal,intron-Proximal4.203474.00100K562TIA1
    chr1955988135598894-3'-UTR,CDS,intron-Distal,intron-Proximal5.304938.09792K562TRA2A
    chr1956161535616210-3'-UTR,CDS,intron-Distal3.496767.44807HepG2GRWD1
    chr1955988155598844-3'-UTR,CDS,intron-Distal,intron-Proximal3.611844.46864HepG2BCLAF1
    chr1956162395616304-3'-UTR,CDS,intron-Distal,intron-Proximal3.264934.89942HepG2GRWD1
    chr1956123695612498-3'-UTR,intron-Distal,intron-Proximal3.522023.04623HepG2KHSRP
    chr1956001265600260-3'-UTR,CDS,intron-Distal,intron-Proximal5.103745.29009HepG2TRA2A
    chr1956161555616195-3'-UTR,CDS,intron-Distal3.477588.88489K562UCHL5
    chr1956162015616247-3'-UTR,CDS,intron-Distal3.475156.79943K562RBM15
    chr1956124685612484-3'-UTR,intron-Distal,intron-Proximal6.6020225.55114K562KHSRP
    chr1956125385612579-3'-UTR,CDS,intron-Distal,intron-Proximal3.663124.66647K562MTPAP
    chr1956001635600256-3'-UTR,CDS,intron-Distal,intron-Proximal4.4885433.31082K562UCHL5
    chr1955988015598867-3'-UTR,CDS,intron-Distal,intron-Proximal7.1790236.74259K562UCHL5
    chr1956125215612579-3'-UTR,CDS,intron-Distal,intron-Proximal3.9223411.39323HepG2GRWD1
    chr1956002165600262-3'-UTR,CDS,intron-Distal,intron-Proximal5.133628.63026K562TRA2A
    chr1956134725613519-3'-UTR,CDS,intron-Distal,intron-Proximal3.469374.68592HepG2PPIG
    chr1956001405600163-3'-UTR,CDS,intron-Distal,intron-Proximal4.6909622.28588K562UCHL5
    chr1956001585600245-3'-UTR,CDS,intron-Distal,intron-Proximal3.650848.66838HepG2BCLAF1
    chr1956048435604865-3'-UTR,CDS,intron-Distal4.215044.72880HepG2GRWD1
    chr1956134745613525-3'-UTR,CDS,intron-Distal,intron-Proximal3.611308.38773HepG2GRWD1
    chr1955988445598886-3'-UTR,CDS,intron-Distal5.2708516.52622K562ZNF622
    chr1956001405600181-3'-UTR,CDS,intron-Distal,intron-Proximal3.506097.98451K562DDX24
    chr1956124415612500-3'-UTR,intron-Distal,intron-Proximal3.385595.79905HepG2BCLAF1
    chr1956001535600257-3'-UTR,CDS,intron-Distal,intron-Proximal4.5821222.30154K562ZNF622
    chr1956120465612104-3'-UTR,intron-Distal3.615798.72457K562RBM15
    chr1956001815600251-3'-UTR,CDS,intron-Distal,intron-Proximal3.354769.35554K562DDX24
    chr1956049325604947-3'-UTR,CDS,intron-Distal3.586714.57186K562TRA2A
    chr1956125255612566-3'-UTR,CDS,intron-Distal,intron-Proximal3.6125713.16579K562UCHL5
    chr1956049025604946-3'-UTR,CDS,intron-Distal3.517716.13978HepG2PPIG
    chr1956226875622735-5'-UTR,CDS,intron-Distal3.206414.89505K562TRA2A
    chr1956105905610651-5'-UTR,CDS,intron-Distal,intron-Proximal4.1579039.19838K562AQR
    chr1956213205621366-5'-UTR,CDS,intron-Distal3.848787.35476HepG2GRWD1
    chr1956226915622769-5'-UTR,CDS,intron-Distal4.4459710.93296HepG2GRWD1
    chr1956100375610169-5'-UTR,CDS,intron-Distal,intron-Proximal4.1779615.66053HepG2AQR
    chr1956213205621396-5'-UTR,CDS,intron-Distal3.388457.46666HepG2BUD13
    chr1956100535610106-5'-UTR,CDS,intron-Distal3.7119414.81231K562UCHL5
    chr1956213385621371-5'-UTR,CDS,intron-Distal3.9813211.62230K562UCHL5
    chr1956100615610126-5'-UTR,CDS,intron-Distal,intron-Proximal3.1990314.14983K562AQR
    chr1956106745610735-5'-UTR,CDS,intron-Distal,intron-Proximal4.1511918.39095K562SF3B4
    chr1956100055610025-5'-UTR,CDS,intron-Distal,intron-Proximal4.323904.29290K562TRA2A
    chr1956100675610141-5'-UTR,CDS,intron-Distal,intron-Proximal3.594618.43093HepG2PRPF8
    chr1956100645610121-5'-UTR,CDS,intron-Distal,intron-Proximal4.2610431.81936K562SF3B4
    chr1956100515610150-5'-UTR,CDS,intron-Distal,intron-Proximal3.520036.05650K562XRN2
    chr1956100275610105-5'-UTR,CDS,intron-Distal4.378419.51318HepG2GRWD1
    chr1956213255621403-5'-UTR,CDS,intron-Distal4.9966320.37416K562ZNF622
    chr1956100055610022-5'-UTR,CDS,intron-Distal,intron-Proximal3.053179.44659K562ZNF622
    chr1956226655622751-5'-UTR,CDS,intron-Distal3.6297717.07516K562ZNF622
    chr1956213185621408-5'-UTR,CDS,intron-Distal,intron-Proximal3.3139110.21243K562TRA2A
    chr1956213225621338-5'-UTR,CDS,intron-Distal4.7947812.19074K562UCHL5
    chr1956100865610099-5'-UTR,CDS,intron-Distal4.073753.22245K562GRWD1
    chr1956100445610118-5'-UTR,CDS,intron-Distal,intron-Proximal3.401987.94397K562TRA2A
    chr1955941295594192-CDS,intron-Distal,intron-Proximal3.677999.04968HepG2BUD13
    chr1955917475591760-CDS,intron-Distal,intron-Proximal4.5457221.12832HepG2PRPF8
    chr1955941625594183-CDS,intron-Distal3.5929317.07291K562AQR
    chr1955941415594194-CDS,intron-Distal,intron-Proximal4.232215.20190HepG2SRSF1
    chr1955938935593917-CDS,intron-Distal,intron-Proximal3.5409113.26607HepG2PRPF8
    chr1955878785587954-CDS,intron-Distal,intron-Proximal4.212546.15627HepG2PABPN1
    chr1955939845594004-CDS,intron-Distal3.799813.68346K562PUM1
    chr1955940135594109-CDS,intron-Distal4.6858417.33176K562SRSF1
    chr1955953715595384-CDS,intron-Distal,intron-Proximal3.841267.52293K562GRWD1
    chr1955953715595450-CDS,intron-Distal,intron-Proximal4.311967.95374HepG2ZNF800
    chr1955903755590429-CDS,intron-Distal,intron-Proximal3.796678.77060K562AQR
    chr1955940315594167-CDS,intron-Distal3.3184313.79768HepG2PPIG
    chr1956163315616347-CDS,intron-Distal,intron-Proximal3.067375.57718HepG2PPIG
    chr1955940785594137-CDS,intron-Distal3.565159.20664K562ZNF622
    chr1955903845590408-CDS,intron-Distal3.231776.02234K562UCHL5
    chr1955917205591760-CDS,intron-Distal,intron-Proximal4.504576.58230HepG2AQR
    chr1955941295594189-CDS,intron-Distal3.286768.54225K562GRWD1
    chr1955953915595432-CDS,intron-Distal3.774634.45064HepG2GRWD1
    chr1955878755587932-CDS,intron-Distal,intron-Proximal3.186683.01707K562SLTM
    chr1956164355616468-CDS,intron-Distal,intron-Proximal3.448249.68144HepG2PPIG
    chr1955940655594144-CDS,intron-Distal4.9133028.35922K562UCHL5
    chr1955941205594146-CDS,intron-Distal3.649866.06472K562AQR
    chr1955953695595415-CDS,intron-Distal,intron-Proximal3.3219813.00989K562PUM1
    chr1956163135616346-CDS,intron-Distal,intron-Proximal5.380619.47372K562TRA2A
    chr1955873855587417-CDS,intron-Distal3.975153.48187K562RBM15
    chr1955917215591823-CDS,intron-Distal,intron-Proximal3.340699.29860K562GPKOW
    chr1955941065594190-CDS,intron-Distal,intron-Proximal3.658256.40700HepG2ZNF800
    chr1956225805622660-CDS,intron-Distal3.508516.39282HepG2GRWD1
    chr1955953715595448-CDS,intron-Distal,intron-Proximal3.318884.11903HepG2PABPN1
    chr1955939645594000-CDS,intron-Distal3.332324.56136K562GRWD1
    chr1955941505594189-CDS,intron-Distal3.414009.24847K562ZNF800
    chr1955939525594078-CDS,intron-Distal3.9404414.81159HepG2SRSF1
    chr1955940255594074-CDS,intron-Distal3.188177.07280K562PUM1
    chr1955927615592782-CDS,intron-Distal4.562484.08604HepG2PPIG
    chr1955939125593943-CDS,intron-Distal3.153733.79741HepG2GRWD1
    chr1955917465591803-CDS,intron-Distal,intron-Proximal3.020426.27061HepG2PPIG
    chr1955953765595440-CDS,intron-Distal3.7674814.46377K562ZNF622
    chr1955938735594013-CDS,intron-Distal,intron-Proximal4.5838315.94106K562SRSF1
    chr1956225945622657-CDS,intron-Distal4.826434.54356K562DDX3X
    chr1955877245587775-CDS,intron-Distal3.590573.97821HepG2PABPN1
    chr1955917635591830-CDS,intron-Distal,intron-Proximal3.8851918.13896K562AQR
    chr1956164325616436-CDS,intron-Distal,intron-Proximal3.6638210.62851K562UCHL5
    chr1956164365616452-CDS,intron-Distal,intron-Proximal3.9854513.25627K562UCHL5
    chr1956162855616345-CDS,intron-Distal,intron-Proximal3.2792111.95636K562ZNF622
    chr1956163045616346-CDS,intron-Distal,intron-Proximal3.771865.52031HepG2GRWD1
    chr1955927555592832-CDS,intron-Distal,intron-Proximal3.057686.42750HepG2GRWD1
    chr1955941385594192-CDS,intron-Distal,intron-Proximal3.612113.97821HepG2PABPN1
    chr1955954155595467-CDS,intron-Distal3.7704718.67105K562PUM1
    chr1956163345616346-CDS,intron-Distal,intron-Proximal3.5367210.76678K562UCHL5
    chr1955917475591763-CDS,intron-Distal,intron-Proximal4.3865028.57710K562AQR
    chr1955953845595447-CDS,intron-Distal3.237818.82533K562GRWD1
    chr1956163065616331-CDS,intron-Distal,intron-Proximal3.205875.32969HepG2PPIG
    chr1955939525593981-CDS,intron-Distal4.082724.50960HepG2GRWD1
    chr1956164325616435-CDS,intron-Distal,intron-Proximal3.207235.10448HepG2PPIG
    chr1955938865593952-CDS,intron-Distal,intron-Proximal4.361044.98808HepG2SRSF1
    chr1956164285616443-CDS,intron-Distal,intron-Proximal3.247883.86821K562GPKOW
    chr1955941835594209-CDS,intron-Distal,intron-Proximal3.4579721.48724K562AQR
    chr1955917655591817-CDS,intron-Distal,intron-Proximal5.252468.60090HepG2PRPF8
    chr1955938665593912-CDS,intron-Distal,intron-Proximal3.600306.53375HepG2AQR
    chr1955953895595444-CDS,intron-Distal5.5917623.71599K562UCHL5
    chr1955939595593984-CDS,intron-Distal3.010093.26004K562PUM1
    chr1955941355594186-CDS,intron-Distal3.384185.15500HepG2BCLAF1
    chr1955953725595389-CDS,intron-Distal5.1033516.68518K562UCHL5
    chr1956163075616349-CDS,intron-Distal,intron-Proximal3.139704.39023HepG2BUD13
    chr1955941445594189-CDS,intron-Distal5.0230123.09218K562UCHL5
    chr1955927605592785-CDS,intron-Distal3.321405.71803K562UCHL5
    chr1955877295587790-CDS,intron-Distal,intron-Proximal3.317864.95320HepG2U2AF2
    chr1955917465591811-CDS,intron-Distal,intron-Proximal3.1245014.22191K562BUD13
    chr1956225405622616-CDS,intron-Distal3.141597.02351K562TRA2A
    chr1956163045616334-CDS,intron-Distal,intron-Proximal3.3200912.78728K562UCHL5
    chr1955917025591747-intron-Distal,intron-Proximal4.1338419.55694HepG2PRPF8
    chr1956133255613381-intron-Distal,intron-Proximal3.844189.10472K562AQR
    chr1955941895594222-intron-Distal,intron-Proximal4.5301721.26728K562SF3B4
    chr1955929125592956-intron-Distal,intron-Proximal3.887916.67591K562SF3B4
    chr1955938595593891-intron-Distal,intron-Proximal5.1935915.45935K562AQR
    chr1955895875589664-intron-Distal3.178385.41408K562NONO
    chr1956101215610156-intron-Distal,intron-Proximal4.2489933.64390K562SF3B4
    chr1955964015596510-intron-Distal4.536634.95918HepG2ILF3
    chr1956064255606476-intron-Distal3.198334.74410K562EXOSC5
    chr1955876205587659-intron-Distal,intron-Proximal3.877933.30664K562NONO
    chr1956055385605665-intron-Distal4.527714.12480HepG2HNRNPM
    chr1955953585595366-intron-Distal,intron-Proximal5.4769221.24327K562AQR
    chr1956000975600139-intron-Distal,intron-Proximal4.623638.01338K562AQR
    chr1956078795607955-intron-Distal4.512224.78128K562HNRNPM
    chr1956224955622531-intron-Distal5.945569.95272K562AQR
    chr1956085595608653-intron-Distal3.426894.28420HepG2HNRNPM
    chr1955906095590703-intron-Distal3.770733.41858K562FUS
    chr1955879985588069-intron-Distal,intron-Proximal4.448274.57682HepG2SF3B4
    chr1956062915606331-intron-Distal4.258273.89080K562EXOSC5
    chr1955926745592706-intron-Distal,intron-Proximal5.480759.56266K562AQR
    chr1956104955610556-intron-Distal,intron-Proximal4.1515310.26009K562PRPF8
    chr1955953665595372-intron-Distal,intron-Proximal4.5975623.44090K562AQR
    chr1955909525591059-intron-Distal4.214713.76710K562NONO
    chr1955926785592730-intron-Distal,intron-Proximal3.257136.69747HepG2PRPF8
    chr1956105585610598-intron-Distal,intron-Proximal5.046086.75148K562TIA1
    chr1955901875590254-intron-Distal,intron-Proximal5.569597.24749HepG2EFTUD2
    chr1956057655605871-intron-Distal3.255947.08221K562HNRNPM
    chr1956085655608616-intron-Distal4.730274.51309K562HNRNPM
    chr1955916625591722-intron-Distal,intron-Proximal5.4515431.35979K562AQR
    chr1956101065610158-intron-Distal,intron-Proximal4.5803715.91496HepG2SF3B4
    chr1955952745595327-intron-Distal,intron-Proximal4.5459922.88442K562AQR
    chr1956074375607510-intron-Distal4.864617.63393K562HNRNPM
    chr1956074225607521-intron-Distal4.701114.66899HepG2HNRNPM
    chr1955926875592724-intron-Distal,intron-Proximal3.617776.12893K562BUD13
    chr1956134305613476-intron-Distal,intron-Proximal3.3049110.21279K562AQR
    chr1956082215608275-intron-Distal3.134074.46810K562EXOSC5
    chr1955964035596478-intron-Distal4.355114.49385K562ILF3
    chr1955952685595337-intron-Distal,intron-Proximal3.393988.03773K562PRPF8
    chr1956086165608690-intron-Distal5.022757.90619K562HNRNPM
    chr1956104815610568-intron-Distal,intron-Proximal5.184653.81753HepG2EFTUD2
    chr1955942095594225-intron-Distal,intron-Proximal4.2956420.92172K562AQR
    chr1956105775610603-intron-Distal,intron-Proximal3.538507.17119K562SF3B4
    chr1956105985610632-intron-Distal,intron-Proximal3.080556.79501K562TIA1
    chr1956056455605721-intron-Distal4.167504.51377K562HNRNPM
    chr1956132755613370-intron-Distal3.726806.74060K562PRPF8
    chr1955895625589650-intron-Distal5.058416.95924HepG2HNRNPM
    chr1955938595593893-intron-Distal,intron-Proximal3.9868311.96791HepG2PRPF8
    chr1955952885595358-intron-Distal,intron-Proximal4.439618.66247K562EFTUD2
    chr1955917225591743-intron-Distal,intron-Proximal4.4921128.23402K562AQR
    chr1955891515589212-intron-Distal4.462895.42636K562NONO
    chr1956045455604593-intron-Distal,intron-Proximal4.223289.78712K562AQR
    chr1956000375600108-intron-Distal,intron-Proximal4.059346.95984K562EFTUD2
    chr1956105545610635-intron-Distal,intron-Proximal4.151556.16184K562XRN2
    chr1956069475606978-intron-Distal4.490814.48623K562EXOSC5
    chr1955938915593901-intron-Distal,intron-Proximal5.6106814.81877K562AQR
    chr1955902215590288-intron-Distal,intron-Proximal3.837699.04524K562AQR
    chr1956104255610489-intron-Distal4.0322015.55931K562AQR
    chr1955927065592758-intron-Distal,intron-Proximal4.9026325.11260K562AQR
    chr1956105545610602-intron-Distal,intron-Proximal4.218788.25860K562RBM22
    chr1955953285595358-intron-Distal,intron-Proximal5.4112836.59993K562AQR
    chr1956075165607592-intron-Distal3.427055.57544K562EXOSC5
    chr1956105595610603-intron-Distal,intron-Proximal3.817496.86676HepG2RBM22
    chr1955880125588052-intron-Distal,intron-Proximal4.069205.26108K562SF3B4
    chr1956225315622540-intron-Distal4.604597.50107K562AQR
    chr1955942225594242-intron-Distal,intron-Proximal5.0314918.10508K562SF3B4
    chr1956062205606268-intron-Distal3.723504.31658K562EXOSC5
    chr1956000485600078-intron-Distal,intron-Proximal5.353345.69951K562AQR
    chr1955890325589108-intron-Distal,intron-Proximal4.762053.85055HepG2XPO5
    chr1955895465589626-intron-Distal3.664655.05066K562HNRNPM
    chr1956105575610590-intron-Distal,intron-Proximal3.5532412.86452K562AQR
    chr1956105885610637-intron-Distal,intron-Proximal4.574993.59236HepG2AQR
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein SAFB2 and its RNA.



    Diffrential Expression

    • 6,729 differentially expressed genes after Knockdown/Knockout SAFB2 protein.  





    • 92 RBPs can affect the levels of SAFB2.  







    6,729 differentially expressed genes after Knockdown/Knockout SAFB2 protein :

    Only display 100 entries as example. Please click "View All" button to see all 6,729 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    TSPAN6ENSG00000000003.101091.449201716.08070-0.6529016.5395015.16050HepG2SAFB2
    C1orf112ENSG00000000460.12180.78270324.23690-0.842804.851104.03800HepG2SAFB2
    FUCA2ENSG00000001036.92384.264503164.16220-0.408309.713508.62020HepG2SAFB2
    NIPAL3ENSG00000001461.12332.23460254.956000.381902.192301.60710HepG2SAFB2
    SEMA3FENSG00000001617.7371.16180276.994000.422102.767402.12290HepG2SAFB2
    BADENSG00000002330.9103.1076042.215201.288205.381104.53560HepG2SAFB2
    LAP3ENSG00000002549.81181.525401712.94640-0.5358011.6395010.45910HepG2SAFB2
    CD99ENSG00000002586.132207.881301504.368000.5534014.3021013.00810HepG2SAFB2
    MAD1L1ENSG00000002822.11286.65610177.529100.691204.953104.13370HepG2SAFB2
    LASP1ENSG00000002834.134207.989506015.87340-0.5156018.7739017.31640HepG2SAFB2
    M6PRENSG00000003056.31723.590201971.68990-0.194002.206301.61990HepG2SAFB2
    DBNDD1ENSG00000003249.9832.38720575.993600.531107.291106.31620HepG2SAFB2
    CASP10ENSG00000003400.10715.41150592.187900.272602.164301.58230HepG2SAFB2
    TFPIENSG00000003436.107649.523606860.714200.156902.439201.82810HepG2SAFB2
    ARF5ENSG00000004059.6839.10260652.767400.362202.708702.06950HepG2SAFB2
    PLXND1ENSG00000004399.81779.742301470.936100.274803.720302.99260HepG2SAFB2
    FKBP4ENSG00000004478.51234.873501440.88220-0.222602.371101.76810HepG2SAFB2
    RBM6ENSG00000004534.103611.213502688.088900.425809.912808.81080HepG2SAFB2
    CAMKK1ENSG00000004660.1065.5953035.783300.874202.095601.52240HepG2SAFB2
    RECQLENSG00000004700.11457.01880652.44180-0.513604.193303.42900HepG2SAFB2
    ARHGAP33ENSG00000004777.14263.25580116.377301.1776010.796909.65390HepG2SAFB2
    PDK4ENSG00000004799.71.0806011.19860-3.373402.212101.62480HepG2SAFB2
    SLC25A13ENSG00000004864.91064.022201337.44960-0.330004.344103.56880HepG2SAFB2
    CDC27ENSG00000004897.72354.856602683.32430-0.188402.264801.67250HepG2SAFB2
    UPF1ENSG00000005007.81652.900201053.468700.6498016.1629014.79880HepG2SAFB2
    SKAP2ENSG00000005020.8306.00390530.95460-0.7950010.190509.07560HepG2SAFB2
    POLR2JENSG00000005075.11705.28760562.868400.325302.816202.16760HepG2SAFB2
    DHX33ENSG00000005100.8904.839001196.25950-0.402805.724104.85010HepG2SAFB2
    RPAP3ENSG00000005175.5339.91450424.50250-0.320601.968601.40990HepG2SAFB2
    CIAPIN1ENSG00000005194.10646.03420844.38570-0.386302.458101.84500HepG2SAFB2
    SPPL2BENSG00000005206.12472.59680161.612701.548006.975006.02000HepG2SAFB2
    KMT2EENSG00000005483.151387.123501741.04000-0.327904.278403.50830HepG2SAFB2
    RHBDD2ENSG00000005486.12481.92390306.688300.651906.858005.91180HepG2SAFB2
    ZNF195ENSG00000005801.12337.95900452.98860-0.422603.194302.51250HepG2SAFB2
    MYCBP2ENSG00000005810.13994.014601188.83220-0.258202.721102.08060HepG2SAFB2
    FBXL3ENSG00000005812.6221.63960383.46310-0.790904.040003.28670HepG2SAFB2
    PDK2ENSG00000005882.7487.72580352.086500.470004.057703.30290HepG2SAFB2
    ITGA3ENSG00000005884.1360.19230111.74110-0.892503.303002.60950HepG2SAFB2
    ZFXENSG00000005889.11658.82160502.533700.390603.690402.96580HepG2SAFB2
    LAMP2ENSG00000005893.112711.301203655.15400-0.4309011.3754010.20830HepG2SAFB2
    ASB4ENSG00000005981.8108.84520192.33540-0.821304.652203.85290HepG2SAFB2
    GDE1ENSG00000006007.71154.072701596.07970-0.467808.829207.77720HepG2SAFB2
    OSBPL7ENSG00000006025.7247.63850170.754200.536202.960902.29980HepG2SAFB2
    TMEM98ENSG00000006042.71494.990301252.824000.254903.006502.34140HepG2SAFB2
    SYNRGENSG00000006114.11593.97230736.69250-0.310702.734602.09260HepG2SAFB2
    TMEM132AENSG00000006118.10902.14970376.165201.261908.170907.15050HepG2SAFB2
    AP2B1ENSG00000006125.123121.003803977.15510-0.349708.092807.07670HepG2SAFB2
    DLX6ENSG00000006377.970.52230135.24860-0.939504.247103.47890HepG2SAFB2
    MAP3K9ENSG00000006432.11385.17130558.67370-0.536505.502704.64660HepG2SAFB2
    JHDM1DENSG00000006459.62167.230401802.518700.265702.281601.68770HepG2SAFB2
    AGKENSG00000006530.11431.53410559.16310-0.373803.052702.38220HepG2SAFB2
    ALDH3B1ENSG00000006534.11124.4367081.296100.614102.090201.51760HepG2SAFB2
    FARP2ENSG00000006607.9729.70390895.36630-0.295202.842202.19140HepG2SAFB2
    IFRD1ENSG00000006652.9504.57790629.66880-0.319502.577301.95150HepG2SAFB2
    GTF2IRD1ENSG00000006704.6546.63150370.533300.560905.883804.99940HepG2SAFB2
    PAF1ENSG00000006712.10886.00600691.930100.356603.412302.71020HepG2SAFB2
    VPS41ENSG00000006715.11451.61550687.29430-0.605807.869106.86530HepG2SAFB2
    UPP2ENSG00000007001.88.001600.0000099999.999902.520801.90110HepG2SAFB2
    MARK4ENSG00000007047.10780.27370491.759200.6659010.223409.10540HepG2SAFB2
    PROM1ENSG00000007062.7441.56870561.10600-0.345602.683402.04620HepG2SAFB2
    CCDC124ENSG00000007080.6335.47610105.586901.6677022.7135021.11160HepG2SAFB2
    PAFAH1B1ENSG00000007168.81078.661701641.64100-0.6059014.1528012.86480HepG2SAFB2
    KIAA0100ENSG00000007202.102693.226403154.72610-0.228203.515002.80490HepG2SAFB2
    GAS7ENSG00000007237.1422.4354061.51060-1.455103.994303.24430HepG2SAFB2
    TRAPPC6AENSG00000007255.6122.2755040.027701.611008.723007.67470HepG2SAFB2
    RPUSD1ENSG00000007376.3159.4404052.499601.602503.558002.84360HepG2SAFB2
    BAIAP3ENSG00000007516.9121.8638065.102100.904403.681902.95770HepG2SAFB2
    TSR3ENSG00000007520.3257.4282085.654901.5875012.1158010.91520HepG2SAFB2
    TEAD3ENSG00000007866.14808.70380633.488600.352203.570402.85480HepG2SAFB2
    MYLIPENSG00000007944.1052.31930118.43440-1.178705.304004.46460HepG2SAFB2
    PSMB1ENSG00000008018.82189.446302512.57000-0.198602.557901.93390HepG2SAFB2
    CDK11AENSG00000008128.18611.18510362.860600.752105.405704.55750HepG2SAFB2
    CYTH3ENSG00000008256.11124.39810180.74500-0.539002.320401.72220HepG2SAFB2
    CYB561ENSG00000008283.11100.9593031.212401.693507.872106.86790HepG2SAFB2
    CELSR3ENSG00000008300.10868.84470647.168400.424905.137504.30840HepG2SAFB2
    AASSENSG00000008311.10344.97030452.05780-0.390001.986001.42520HepG2SAFB2
    PLEKHG6ENSG00000008323.11278.65440162.624500.776805.884504.99980HepG2SAFB2
    MPNDENSG00000008382.11135.1913079.516700.765603.122502.44670HepG2SAFB2
    IL32ENSG00000008517.121950.530301407.743200.470409.555608.47040HepG2SAFB2
    PKD1ENSG00000008710.13682.36270277.385801.2985011.6945010.51150HepG2SAFB2
    MAPK8IP2ENSG00000008735.1012.7743031.63690-1.308401.937601.38220HepG2SAFB2
    MED24ENSG00000008838.131962.313001462.969800.423608.285007.26020HepG2SAFB2
    RPS20ENSG00000008988.57593.486903943.393500.9452028.3255026.57450HepG2SAFB2
    REV3LENSG00000009413.11887.330501266.74920-0.513609.050407.99080HepG2SAFB2
    MASP2ENSG00000009724.12241.5021083.173401.5377014.9911013.67350HepG2SAFB2
    POMT2ENSG00000009830.7260.46430383.96840-0.559904.415603.63490HepG2SAFB2
    VTA1ENSG00000009844.111009.426101688.93320-0.7426020.5837019.05550HepG2SAFB2
    MLXIPLENSG00000009950.112350.649001166.972001.0102026.9113025.19260HepG2SAFB2
    BAZ1BENSG00000009954.61925.302802438.16160-0.340706.277005.36560HepG2SAFB2
    RANBP9ENSG00000010017.91101.239201349.77580-0.293603.603502.88550HepG2SAFB2
    METTL13ENSG00000010165.15367.18690456.72690-0.314802.011901.44850HepG2SAFB2
    DYRK4ENSG00000010219.9272.38940163.440800.736805.285404.44760HepG2SAFB2
    ZNF207ENSG00000010244.122251.452303096.15480-0.4596011.9617010.76800HepG2SAFB2
    UQCRC1ENSG00000010256.63146.668802546.263300.305305.815004.93550HepG2SAFB2
    CD9ENSG00000010278.7139.77110201.06880-0.524602.394601.78870HepG2SAFB2
    NCAPD2ENSG00000010292.82810.909203671.41260-0.385309.315508.24280HepG2SAFB2
    IFFO1ENSG00000010295.15322.97210181.952800.827707.333106.35600HepG2SAFB2
    SEMA3GENSG00000010319.2729.89670398.366300.8735014.1097012.82350HepG2SAFB2
    NISCHENSG00000010322.111204.44930799.834700.5905011.2362010.07590HepG2SAFB2
    STAB1ENSG00000010327.617.598403.264902.430202.544701.92250HepG2SAFB2
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    92 RBPs can affect the gene expression of SAFB2 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    SAFB2ENSG00000130254.71960.961601488.945700.397203.477202.42500HepG2ABCF1
    SAFB2ENSG00000130254.7924.89290721.216500.358801.811001.37070HepG2AKAP1
    SAFB2ENSG00000130254.7839.47630566.919900.566204.455703.48580HepG2CIRBP
    SAFB2ENSG00000130254.71196.258901041.679500.199501.889101.32510HepG2CKAP4
    SAFB2ENSG00000130254.71279.390101893.78000-0.565806.334305.32560HepG2CPSF6
    SAFB2ENSG00000130254.7873.79150701.447300.316902.266201.44900HepG2DDX24
    SAFB2ENSG00000130254.71027.62690690.768100.572904.636703.84250HepG2DDX3X
    SAFB2ENSG00000130254.71272.35280996.803600.352004.103703.31130HepG2DKC1
    SAFB2ENSG00000130254.7441.49460616.22400-0.481104.388603.51940HepG2DNAJC21
    SAFB2ENSG00000130254.71176.19770891.884900.399102.899201.95720HepG2EEF2
    SAFB2ENSG00000130254.7862.98200570.426900.597204.680803.92150HepG2EIF2S1
    SAFB2ENSG00000130254.7926.81310676.793500.453504.310302.99840HepG2EIF3G
    SAFB2ENSG00000130254.7995.39170630.272600.659205.484204.58510HepG2EIF4A3
    SAFB2ENSG00000130254.71051.74740613.880700.776705.954404.97300HepG2EIF4B
    SAFB2ENSG00000130254.7851.53120582.835600.546905.019903.97390HepG2FUBP3
    SAFB2ENSG00000130254.7982.55290636.270300.626805.483504.53130HepG2FXR1
    SAFB2ENSG00000130254.7800.20540590.049000.439402.699202.04120HepG2G3BP1
    SAFB2ENSG00000130254.7947.78240626.654400.596805.117903.89350HepG2G3BP2
    SAFB2ENSG00000130254.71234.237602146.65270-0.798509.958108.79640HepG2GPKOW
    SAFB2ENSG00000130254.7848.00210597.910100.504003.874303.05940HepG2HNRNPK
    SAFB2ENSG00000130254.7773.341301002.49210-0.374403.141102.42570HepG2HNRNPL
    SAFB2ENSG00000130254.71575.148602048.59870-0.379102.272001.69550HepG2HNRNPLL
    SAFB2ENSG00000130254.71288.452601037.581200.312302.740201.79380HepG2HNRNPM
    SAFB2ENSG00000130254.71001.43030599.706100.739607.531506.47400HepG2IGF2BP2
    SAFB2ENSG00000130254.7937.78140563.063400.735902.634401.67650HepG2IGF2BP3
    SAFB2ENSG00000130254.7900.38130702.187100.358604.097003.22140HepG2ILF2
    SAFB2ENSG00000130254.7835.94340603.325000.470402.576201.61380HepG2KHSRP
    SAFB2ENSG00000130254.71324.06030636.494001.0566014.1868012.75230HepG2MAGOH
    SAFB2ENSG00000130254.71272.75650639.999200.9917011.8537010.61310HepG2MATR3
    SAFB2ENSG00000130254.71049.40220655.028300.679806.134205.20870HepG2NCBP2
    SAFB2ENSG00000130254.7785.502801091.34120-0.474405.150104.11460HepG2NOL12
    SAFB2ENSG00000130254.7922.33540583.131700.661405.850204.81420HepG2PABPC4
    SAFB2ENSG00000130254.7924.72900602.625800.617709.543008.52540HepG2PCBP1
    SAFB2ENSG00000130254.71122.98070779.560800.526503.041501.95280HepG2PCBP2
    SAFB2ENSG00000130254.7873.20430613.233800.509806.540005.76860HepG2PTBP1
    SAFB2ENSG00000130254.71303.744001106.000900.237203.022702.40870HepG2PUM1
    SAFB2ENSG00000130254.7964.24160664.063000.538006.300305.41280HepG2QKI
    SAFB2ENSG00000130254.71167.436601844.21660-0.6597011.565309.99740HepG2RBM15
    SAFB2ENSG00000130254.71382.435201171.174100.239201.825001.38140HepG2RBM22
    SAFB2ENSG00000130254.7845.16090602.711700.487704.541803.69520HepG2RBM25
    SAFB2ENSG00000130254.7900.01760591.026100.606603.713902.48390HepG2RCC2
    SAFB2ENSG00000130254.71016.47330682.437500.574708.113407.27390HepG2NELFE
    SAFB2ENSG00000130254.7930.94260635.657400.550304.088103.35710HepG2RECQL
    SAFB2ENSG00000130254.71671.826201363.603400.293902.344601.70750HepG2RPLP0
    SAFB2ENSG00000130254.71000.04090738.936600.436402.133201.30310HepG2RPS10
    SAFB2ENSG00000130254.7862.90400704.498100.292502.013401.48120HepG2RPS19
    SAFB2ENSG00000130254.7911.18570671.230300.440803.044402.20550HepG2RPS2
    SAFB2ENSG00000130254.7761.25970524.477500.537402.629201.86040HepG2RRP9
    SAFB2ENSG00000130254.7508.54030612.18510-0.267601.898401.34820HepG2SAFB2
    SAFB2ENSG00000130254.72576.243801830.532000.492903.129602.41280HepG2SF3A3
    SAFB2ENSG00000130254.7846.60800638.384600.407204.277203.56630HepG2SF3B4
    SAFB2ENSG00000130254.7987.33050713.907100.467706.961606.01280HepG2SMN1
    SAFB2ENSG00000130254.71497.731202256.13960-0.591104.006303.05710HepG2SNRNP70
    SAFB2ENSG00000130254.71675.042601322.773300.340504.649204.04900HepG2SRFBP1
    SAFB2ENSG00000130254.71036.05670666.364300.6366010.301309.51740HepG2SRSF1
    SAFB2ENSG00000130254.71550.800002181.91740-0.492603.776302.58870HepG2SRSF3
    SAFB2ENSG00000130254.71033.190201243.73000-0.267602.249801.61550HepG2SRSF7
    SAFB2ENSG00000130254.71620.461001148.437300.496609.087208.26250HepG2SSB
    SAFB2ENSG00000130254.71079.14150795.864200.439202.639401.56870HepG2STIP1
    SAFB2ENSG00000130254.71786.685201169.880300.6108010.958209.85900HepG2SUCLG1
    SAFB2ENSG00000130254.7984.50020599.034600.7167011.1481010.14120HepG2TAF15
    SAFB2ENSG00000130254.71629.691301997.00020-0.293202.228001.56760HepG2TARDBP
    SAFB2ENSG00000130254.7855.54340667.951700.357003.014902.49620HepG2TIAL1
    SAFB2ENSG00000130254.7855.29870673.939700.343703.459802.84460HepG2TRIM56
    SAFB2ENSG00000130254.72416.329801286.366600.9094016.2328014.66410HepG2U2AF1
    SAFB2ENSG00000130254.71040.32180673.979800.626202.727202.00740HepG2XRN2
    SAFB2ENSG00000130254.71275.89090998.377800.353704.894904.04420HepG2ZC3H8
    SAFB2ENSG00000130254.73460.594902357.730100.553504.869104.15090K562AGGF1
    SAFB2ENSG00000130254.71670.054801382.915500.272103.028301.44990K562AKAP1
    SAFB2ENSG00000130254.73906.144302453.406900.670908.329807.13500K562AKAP8L
    SAFB2ENSG00000130254.73576.207702574.369100.474103.975102.86210K562ATP5C1
    SAFB2ENSG00000130254.71455.158701194.402400.284803.267202.22100K562BCLAF1
    SAFB2ENSG00000130254.71122.81550787.433500.511804.673003.22290K562CCAR1
    SAFB2ENSG00000130254.74332.780903625.539700.257002.544201.60920K562CELF1
    SAFB2ENSG00000130254.72918.730202285.250800.352903.934902.47470K562DDX21
    SAFB2ENSG00000130254.75146.163303216.027800.6781023.3066021.60290K562DDX47
    SAFB2ENSG00000130254.71223.20370881.547600.472503.981302.33810K562DHX30
    SAFB2ENSG00000130254.71418.354001101.984900.364002.743301.83470K562EFTUD2
    SAFB2ENSG00000130254.71815.492302125.76440-0.227602.305201.63960K562EIF2S2
    SAFB2ENSG00000130254.71178.71550983.915200.260502.281501.55430K562EIF3G
    SAFB2ENSG00000130254.71675.896902564.25410-0.613603.037602.14730K562FIP1L1
    SAFB2ENSG00000130254.71566.557401152.780800.442404.713102.79490K562G3BP1
    SAFB2ENSG00000130254.7885.317601252.11050-0.500103.278002.49630K562G3BP2
    SAFB2ENSG00000130254.72101.650501455.518400.529907.554205.85630K562HNRNPA1
    SAFB2ENSG00000130254.71062.482601321.80680-0.315102.517701.94530K562HNRNPC
    SAFB2ENSG00000130254.71927.720403476.90970-0.850904.597703.57750K562HSPD1
    SAFB2ENSG00000130254.71109.32620822.702000.431103.266901.63380K562ILF3
    SAFB2ENSG00000130254.73609.783402603.391000.471403.358402.43930K562KIF1C
    SAFB2ENSG00000130254.7934.118701461.92350-0.646207.856605.80690K562NCBP2
    SAFB2ENSG00000130254.7817.349701086.16790-0.410202.921201.57980K562NONO
    SAFB2ENSG00000130254.73369.745502720.079000.308907.636206.48130K562NSUN2
    SAFB2ENSG00000130254.71804.058401127.521300.678009.871107.97790K562PCBP2
    SAFB2ENSG00000130254.71877.228302910.60090-0.632703.266002.36160K562PPIG
    SAFB2ENSG00000130254.7935.554901185.16670-0.341202.414901.57560K562PSIP1
    SAFB2ENSG00000130254.73478.443302432.521300.515904.898404.20180K562PUS1
    SAFB2ENSG00000130254.73249.969102370.610500.455103.575802.91560K562RBM15
    SAFB2ENSG00000130254.71210.15580867.249700.480604.393802.76400K562SLBP
    SAFB2ENSG00000130254.72412.609402039.412700.242302.616001.48350K562SRSF7
    SAFB2ENSG00000130254.7749.592401014.93810-0.437204.593102.88570K562SSB
    SAFB2ENSG00000130254.73898.123202806.611100.473907.656905.35950K562SUCLG1
    SAFB2ENSG00000130254.72015.925701213.061200.732708.290706.23740K562U2AF1
    SAFB2ENSG00000130254.72180.838101253.037800.7994017.1204015.07570K562U2AF2
    SAFB2ENSG00000130254.73451.371202566.295200.4274010.752409.21370K562WDR43
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    4 alternative splicing events after Knockdown/Knockout SAFB2 protein :

    Only display 100 entries as example. Please click "View All" button to see all 4 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SENSUN6ENSG00000241058.1chr10-1893249718932569189314041893148418937418189375740.072000.000000.00679includedK562SAFB2
    SEWNK1ENSG00000060237.12chr12+9770319782709712489714369873779875270.087000.000000.04575includedK562SAFB2
    SERPS24ENSG00000138326.14chr10+7979996179799983797969517979706279800372798004550.094000.000000.00104includedK562SAFB2
    SECRYBB2P1ENSG00000100058.8chr22+258516782585180725844071258442512585322525853368-0.381000.000010.08065excludedK562SAFB2





    19 RBPs can affect the splicing of SAFB2 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SESAFB2ENSG00000130254.7chr19-561643256164975616142561634656213195621407-0.127000.000000.00002excludedK562SF3B4
    SESAFB2ENSG00000130254.7chr19-561113056116415610005561010656125505612578-0.501000.000000.00000excludedK562AKAP8L
    SESAFB2ENSG00000130254.7chr19-5611130561164156106495610699561255056125780.074000.004280.04706includedHepG2U2AF2
    SESAFB2ENSG00000130254.7chr19-5610299561043256100055610106561064956106990.113000.000160.00253includedK562AQR
    SESAFB2ENSG00000130254.7chr19-5611882561202456111305611641561255056126520.080000.000000.00000includedK562AQR
    SESAFB2ENSG00000130254.7chr19-560479756049475600140560027156100055610106-0.196000.000020.00038excludedK562AQR
    SESAFB2ENSG00000130254.7chr19-561643256164975616142561634656213195621407-0.068000.000420.00585excludedK562AQR
    SESAFB2ENSG00000130254.7chr19-5611130561164156106495610699561255056125780.210000.000000.00021includedK562FXR1
    SESAFB2ENSG00000130254.7chr19-561064956106995610005561010656125505612578-0.602000.000000.00000excludedK562PUS1
    SESAFB2ENSG00000130254.7chr19-5611130561164156106495610699561255056125780.117000.000030.00329includedHepG2SFPQ
    SESAFB2ENSG00000130254.7chr19-561643256164975616142561634656213195621407-0.059000.002030.04007excludedK562U2AF1
    SESAFB2ENSG00000130254.7chr19-561113056116415610649561069956125505612578-0.143000.000100.00487excludedHepG2SF3A3
    SESAFB2ENSG00000130254.7chr19-561643256164975616142561634656213195621407-0.060000.000000.00007excludedHepG2SF3A3
    SESAFB2ENSG00000130254.7chr19-561113056116415610649561069956125505612578-0.254000.000010.00177excludedK562HNRNPUL1
    SESAFB2ENSG00000130254.7chr19-561113056116415610005561010656125505612578-0.355000.000000.00005excludedK562UTP18
    SESAFB2ENSG00000130254.7chr19-561064956106995610005561010656125505612578-0.226000.004330.08224excludedK562RBM15
    SESAFB2ENSG00000130254.7chr19-561064956106995610005561010656125505612578-0.595000.000000.00000excludedK562AGGF1
    SESAFB2ENSG00000130254.7chr19-561643256164975616142561634656213195621407-0.061000.000000.00012excludedK562SF3B1
    SESAFB2ENSG00000130254.7chr19-561064956106995610005561010656125505612578-0.443000.000060.08855excludedK562DDX3X
    A3SSSAFB2ENSG00000130254.7chr19-5587711558781355877115587778558787855879910.228000.000030.00448longerHepG2SF3A3
    A3SSSAFB2ENSG00000130254.7chr19-561000556101455610005561010656106495612484-0.241000.000090.01538shorterK562FXR1
    A3SSSAFB2ENSG00000130254.7chr19-5591758559192455917585591804559275755928980.134000.000010.00009longerK562AQR
    A3SSSAFB2ENSG00000130254.7chr19-5595371559560055953715595508559880355990090.107000.000000.00000longerK562AQR
    A3SSSAFB2ENSG00000130254.7chr19-5587878558810555878785587991559028855904480.163000.000030.00032longerK562AQR
    A3SSSAFB2ENSG00000130254.7chr19-5610015561014556100155610106561064956106990.077000.011360.05889longerK562AQR
    A3SSSAFB2ENSG00000130254.7chr19-559537155956005595371559552155988035599009-0.524000.000000.00000shorterK562AQR
    A5SSSAFB2ENSG00000130254.7chr19-561613856163465616142561634656134755613538-0.158000.000010.00826shorterK562SAFB
    A5SSSAFB2ENSG00000130254.7chr19-561613856163465616142561634656134755613538-0.284000.000000.00116shorterK562PTBP1
    A5SSSAFB2ENSG00000130254.7chr19-561613856163465616142561634656134755613538-0.285000.000000.00010shorterK562FXR1
    A5SSSAFB2ENSG00000130254.7chr19-561613856163465616142561634656134755613538-0.219000.000920.05093shorterK562SRSF1
    MXESAFB2ENSG00000130254.7chr19-56100055610106561113056116415600140560027156125505612578-0.423000.000000.000002includedK562PUS1
    MXESAFB2ENSG00000130254.7chr19-561113056116415612550561257856106495610699561347556135380.129000.006010.041981includedK562AQR
    MXESAFB2ENSG00000130254.7chr19-559028855904195591758559184655878785587991559275755928980.057000.010500.065811includedK562AQR
    MXESAFB2ENSG00000130254.7chr19-56100055610125561064956106995600140560027156111305611641-0.287000.000000.000002includedK562AQR
    MXESAFB2ENSG00000130254.7chr19-56100055610106561113056116415600140560027156125505612578-0.121000.000200.002212includedK562AQR
    MXESAFB2ENSG00000130254.7chr19-56100055610106561064956106995600140560027156111305611641-0.306000.000000.000002includedK562AQR
    MXESAFB2ENSG00000130254.7chr19-56100155610106561064956106995604797560494756111305611641-0.086000.011190.069352includedK562AQR
    MXESAFB2ENSG00000130254.7chr19-56100055610106561113056116415600140560027156125505612578-0.321000.000050.004342includedK562IGF2BP2

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    No autoregularoty alternative splicing events between protein SAFB2 and its RNA.