POMT2

General Information

Gene Name       : POMT2
Gene ID             : ENSG00000009830.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: POMT2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878POMT2ENSG00000009830.116.693.635.16ENCSR000AEF
HepG2POMT2ENSG00000009830.1114.1713.0213.59ENCSR985KAT
K562POMT2ENSG00000009830.114.775.064.91ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for POMT2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • POMT2 RNA is bound by 7 proteins.  







eCLIP assay for POMT2 is not avaliable on ENCORE database.





7 proteins are bound to POMT2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr147774477577744853-3'-UTR,CDS,intron-Distal,intron-Proximal4.573673.79199HepG2PPIG
chr147775182177751921-CDS,intron-Distal,intron-Proximal4.063203.56019HepG2GRWD1
chr147775123777751314-CDS,intron-Distal,intron-Proximal3.933745.64484HepG2PRPF8
chr147774610877746172-CDS,intron-Distal,intron-Proximal4.902396.90190HepG2AQR
chr147774615477746199-CDS,intron-Distal,intron-Proximal4.2239219.51751HepG2PRPF8
chr147774608977746166-CDS,intron-Distal,intron-Proximal5.8395510.48996K562AQR
chr147775131077751387-CDS,intron-Distal,intron-Proximal4.623684.97342HepG2PPIG
chr147775308777753169-CDS,intron-Distal,intron-Proximal3.270003.22545HepG2PPIG
chr147774674977746807-CDS,intron-Distal,intron-Proximal3.354963.86355HepG2PPIG
chr147774637177746411-CDS,intron-Distal,intron-Proximal3.223453.05161HepG2PPIG
chr147775015577750204-CDS,intron-Distal,intron-Proximal3.398693.86355HepG2PPIG
chr147774610877746154-CDS,intron-Distal,intron-Proximal4.8071621.80513HepG2PRPF8
chr147774615677746219-CDS,intron-Distal,intron-Proximal3.217655.08732HepG2PPIG
chr147775181677751902-CDS,intron-Distal,intron-Proximal5.334649.74663HepG2PPIG
chr147775064177750746-intron-Distal,intron-Proximal4.020054.77518HepG2U2AF2
chr147775062777750745-intron-Distal,intron-Proximal4.521605.20135HepG2QKI
chr147774642477746485-intron-Distal,intron-Proximal4.149003.74254HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for POMT2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for POMT2 is not available on ENCORE database.

  • 53 RBPs can affect the levels of POMT2.  








The Knockdown/knockout RNA-Seq assay for POMT2 is not available on ENCORE database.





53 RBPs can affect the gene expression of POMT2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
POMT2ENSG00000009830.7856.72710511.138600.7450013.1158011.99640HepG2ACO1
POMT2ENSG00000009830.7662.28660496.060900.416802.055401.58940HepG2AKAP1
POMT2ENSG00000009830.7613.14170438.245300.484402.781801.74210HepG2AKAP8
POMT2ENSG00000009830.7761.18060513.553600.567607.083705.91950HepG2AKAP8L
POMT2ENSG00000009830.7891.04680664.863700.422304.715903.86050HepG2AUH
POMT2ENSG00000009830.7596.49930429.466900.473903.263902.62070HepG2BOP1
POMT2ENSG00000009830.7855.30090596.959100.518706.091105.20770HepG2CELF1
POMT2ENSG00000009830.7618.62540475.132900.380601.963601.42790HepG2DDX3X
POMT2ENSG00000009830.7605.61110408.280800.568703.472102.78720HepG2DDX6
POMT2ENSG00000009830.7669.84290422.232800.665703.942903.12770HepG2EIF4B
POMT2ENSG00000009830.71071.63800763.342800.489306.263905.42090HepG2ETF1
POMT2ENSG00000009830.7827.86660555.113800.576503.658002.78070HepG2FIP1L1
POMT2ENSG00000009830.7648.83870437.615200.568103.957303.14000HepG2FXR1
POMT2ENSG00000009830.7641.11390405.851500.659504.917404.04140HepG2G3BP1
POMT2ENSG00000009830.7670.37660435.949000.620704.255402.99000HepG2GNB2L1
POMT2ENSG00000009830.7635.73220446.966500.508203.130302.45420HepG2GPKOW
POMT2ENSG00000009830.7608.97900434.039200.488503.325502.57090HepG2HNRNPC
POMT2ENSG00000009830.7661.62360411.196700.686105.789004.80670HepG2HNRNPK
POMT2ENSG00000009830.7464.72060584.75340-0.331502.668402.00570HepG2HNRNPL
POMT2ENSG00000009830.7418.23240560.89490-0.423403.138902.37130HepG2IGF2BP1
POMT2ENSG00000009830.7623.26560412.503300.595302.968902.27330HepG2IGF2BP2
POMT2ENSG00000009830.71154.93890635.464700.861808.246506.80610HepG2LARP4
POMT2ENSG00000009830.7579.99520437.768800.405802.128301.55060HepG2MAGOH
POMT2ENSG00000009830.7758.44570450.531400.751306.462905.51270HepG2NCBP2
POMT2ENSG00000009830.7266.01710378.20180-0.507602.542701.82420HepG2NSUN2
POMT2ENSG00000009830.7687.12460399.814000.7811011.2197010.13090HepG2PCBP1
POMT2ENSG00000009830.7711.27940406.822700.8059011.8616010.88590HepG2PTBP1
POMT2ENSG00000009830.7862.92550644.987300.419905.230704.46840HepG2PUM1
POMT2ENSG00000009830.7744.13520520.630200.515206.326305.46320HepG2PUS1
POMT2ENSG00000009830.7608.11860440.605500.464803.602202.90320HepG2QKI
POMT2ENSG00000009830.7569.05840399.875400.508903.805903.02440HepG2RBM25
POMT2ENSG00000009830.7596.55930452.757100.397802.980902.42330HepG2NELFE
POMT2ENSG00000009830.7439.03780613.64740-0.483103.581302.82120HepG2RPLP0
POMT2ENSG00000009830.7447.27930301.489000.569003.996703.27160HepG2RPS19
POMT2ENSG00000009830.7260.46430383.96840-0.559904.415603.63490HepG2SAFB2
POMT2ENSG00000009830.7566.51350423.560400.419403.245802.61200HepG2SF3B4
POMT2ENSG00000009830.7483.26320582.57140-0.269601.940301.33420HepG2SLBP
POMT2ENSG00000009830.7601.37060447.761200.425404.188303.42630HepG2SMN1
POMT2ENSG00000009830.7658.29290469.776200.486702.219101.52340HepG2SNRNP70
POMT2ENSG00000009830.7871.07250720.618500.273502.338301.86500HepG2SRFBP1
POMT2ENSG00000009830.7889.87290599.906300.568804.635303.86090HepG2SRSF5
POMT2ENSG00000009830.7474.82650359.672500.400602.971802.40400HepG2SRSF9
POMT2ENSG00000009830.7687.34400467.482100.556003.119002.40540HepG2SUPV3L1
POMT2ENSG00000009830.7521.13370422.708900.301901.994401.50040HepG2TRIM56
POMT2ENSG00000009830.7375.07890276.135700.441702.025701.37580HepG2UCHL5
POMT2ENSG00000009830.7622.40060520.194700.258701.939201.45930HepG2ZNF622
POMT2ENSG00000009830.7491.26320692.97010-0.496304.443403.19970K562CELF1
POMT2ENSG00000009830.7262.78670165.786500.664503.692302.78250K562EIF3G
POMT2ENSG00000009830.7324.87650209.022600.636104.410203.67020K562FXR1
POMT2ENSG00000009830.7101.60560169.68760-0.739902.750402.04590K562G3BP2
POMT2ENSG00000009830.7368.75130544.39860-0.562003.034102.24460K562GRSF1
POMT2ENSG00000009830.7297.38450202.291700.555802.842102.23810K562HNRNPC
POMT2ENSG00000009830.7225.26090342.48460-0.604404.276603.15710K562HNRNPU
POMT2ENSG00000009830.7266.55800344.21060-0.368802.099501.43960K562NSUN2
POMT2ENSG00000009830.7193.27550348.17270-0.849104.655003.57730K562PCBP3
POMT2ENSG00000009830.7231.15560129.420900.836703.554702.40650K562RPS3
POMT2ENSG00000009830.7386.04620267.860500.527203.469002.54970K562SYNCRIP
POMT2ENSG00000009830.7164.69160242.45930-0.558002.560201.58630K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for POMT2 is not available on ENCORE database.





11 RBPs can affect the splicing of POMT2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPOMT2ENSG00000009830.7chr14-7775357577753614777530907775316577755104777551740.291000.002530.04410includedK562SRSF1
SEPOMT2ENSG00000009830.7chr14-7774650277746561777463637774642377746734777468060.144000.004990.09551includedHepG2HNRNPK
SEPOMT2ENSG00000009830.7chr14-7775044377750683777501397775021677751292777513840.147000.002080.04852includedHepG2HNRNPK
SEPOMT2ENSG00000009830.7chr14-7774587977746026777451557774521277746165777462750.576000.000060.00279includedHepG2HNRNPK
SEPOMT2ENSG00000009830.7chr14-7775785677758007777576567775772377762506777626160.310000.000000.00001includedHepG2HNRNPL
SEPOMT2ENSG00000009830.7chr14-777458797774602677745155777452127774616577746275-0.436000.000830.05870excludedHepG2TIAL1
SEPOMT2ENSG00000009830.7chr14-7775044377750683777501397775021677751292777513840.201000.002830.08280includedK562HNRNPU
SEPOMT2ENSG00000009830.7chr14-777458797774602677745155777452127774616577746275-0.485000.000000.00017excludedHepG2HNRNPC
SEPOMT2ENSG00000009830.7chr14-777458797774602677745155777452127774616577746275-0.566000.001500.02691excludedK562HNRNPC
A3SSPOMT2ENSG00000009830.7chr14-7774636377746561777463637774642377746734777468060.574000.000000.00009longerHepG2HNRNPK
A3SSPOMT2ENSG00000009830.7chr14-7774636377746561777463637774642377746734777468060.217000.000000.00003longerK562AQR
A3SSPOMT2ENSG00000009830.7chr14-7774375777743987777437577774382477744736777448510.132000.002420.01529longerK562AQR
A5SSPOMT2ENSG00000009830.7chr14-7777258877772784777726797777278477771034777711430.190000.001510.08621longerHepG2HNRNPK
RIPOMT2ENSG00000009830.7chr14-7774587977746271777458797774592977746026777462710.114000.000510.00509includedHepG2U2AF2
RIPOMT2ENSG00000009830.7chr14-777450717774627177745071777452127774616577746271-0.665000.000430.02163excludedK562HNRNPUL1
RIPOMT2ENSG00000009830.7chr14-7774507177746271777450717774521277746165777462710.304000.007530.06958includedHepG2QKI
RIPOMT2ENSG00000009830.7chr14-7774507177746271777450717774521277746165777462710.396000.002150.02525includedHepG2HNRNPK
RIPOMT2ENSG00000009830.7chr14-777450717774627177745071777452127774616577746271-0.467000.000280.03930excludedK562PUM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for POMT2 is not avaliable on ENCORE database.