FBXL13

General Information

Gene Name       : FBXL13
Gene ID             : ENSG00000161040.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FBXL13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FBXL13ENSG00000161040.160.400.110.26ENCSR000AEF
HepG2FBXL13ENSG00000161040.160.030.360.20ENCSR985KAT
K562FBXL13ENSG00000161040.1617.3915.0416.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FBXL13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • FBXL13 RNA is bound by 13 proteins.  







eCLIP assay for FBXL13 is not avaliable on ENCORE database.





13 proteins are bound to FBXL13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7102462438102462493-3'-UTR,CDS,intron-Distal,intron-Proximal3.935988.46423K562PRPF8
chr7102572213102572341-CDS,intron-Distal,intron-Proximal3.073685.47590K562PRPF8
chr7102553522102553562-CDS,intron-Distal,intron-Proximal4.144583.71613K562UCHL5
chr7102526277102526467-intron-Distal4.391773.84033K562SAFB2
chr7102593601102593651-intron-Distal4.258273.89085K562EXOSC5
chr7102595845102595885-intron-Distal5.055456.41216K562EXOSC5
chr7102547501102547585-intron-Distal3.438983.87218K562SAFB2
chr7102546245102546307-intron-Distal3.050643.26524K562SAFB2
chr7102549413102549497-intron-Distal3.414535.18925K562PPIL4
chr7102549816102549879-intron-Distal4.179515.07689K562PPIL4
chr7102541952102542025-intron-Distal3.964003.19638K562SAFB2
chr7102545865102545970-intron-Distal3.857573.09773K562HLTF
chr7102457130102457266-intron-Distal3.333153.75092K562SAFB2
chr7102551012102551065-intron-Distal3.212913.30843K562SLTM
chr7102549802102549869-intron-Distal3.412464.34872K562SLTM
chr7102550980102551073-intron-Distal4.528234.55118K562PPIL4
chr7102553440102553514-intron-Distal,intron-Proximal3.752596.18635K562TIA1
chr7102549425102549478-intron-Distal3.036423.99763K562SLTM
chr7102594903102594980-intron-Distal5.380899.35180K562EXOSC5
chr7102525636102525778-intron-Distal3.144863.86112K562SAFB2
chr7102595153102595204-intron-Distal3.648856.96387K562EXOSC5
chr7102545668102545729-intron-Distal3.809943.10466K562SAFB2
chr7102594648102594689-intron-Distal3.762504.61282K562EXOSC5
chr7102509940102510013-intron-Distal3.135973.67498K562SAFB2
chr7102552932102553002-intron-Distal3.398704.48636K562SAFB2
chr7102474395102474512-intron-Distal5.4978112.49273K562PTBP1
chr7102594349102594383-intron-Distal4.014993.30696K562EXOSC5
chr7102471796102471863-intron-Distal3.367526.62338K562TARDBP
chr7102572896102572988-intron-Distal4.070523.66668K562KHSRP
chr7102515693102515826-intron-Distal5.1090715.32361K562PTBP1
chr7102542119102542225-intron-Distal4.134734.13866K562PPIL4
chr7102549167102549222-intron-Distal4.040503.01412K562SAFB2
chr7102516280102516367-intron-Distal4.185784.24113K562MATR3
chr7102534330102534401-intron-Distal4.690569.46053K562PTBP1
chr7102547605102547676-intron-Distal3.157513.87218K562SAFB2
chr7102549803102549902-intron-Distal3.216334.52963K562SAFB2
chr7102547467102547582-intron-Distal4.421423.42967K562SLTM
chr7102548565102548665-intron-Distal3.362974.48017K562SAFB2
chr7102535139102535183-intron-Distal5.978059.66407K562PTBP1
chr7102607159102607257-intron-Distal3.422074.16517K562KHSRP
chr7102550508102550628-intron-Distal3.758164.70071K562SAFB2
chr7102593494102593568-intron-Distal3.926555.80937K562EXOSC5
chr7102546085102546189-intron-Distal3.320276.56297K562SAFB2
chr7102513793102513861-intron-Distal3.872703.01412K562SAFB2
chr7102506818102506902-intron-Distal4.186133.13793K562SAFB
chr7102552746102552840-intron-Distal3.422474.08075K562SAFB2
chr7102460095102460151-intron-Distal3.922473.84033K562SAFB2
chr7102596045102596121-intron-Distal4.926556.73640K562EXOSC5
chr7102476381102476431-intron-Distal4.743304.30178K562PTBP1
chr7102534268102534330-intron-Distal5.4145515.94752K562PTBP1
chr7102543915102544003-intron-Distal4.285325.13876K562SAFB2
chr7102549409102549489-intron-Distal3.809945.10657K562SAFB2
chr7102595798102595845-intron-Distal4.815356.73640K562EXOSC5
chr7102600592102600677-intron-Distal4.386247.61413K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FBXL13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FBXL13 is not available on ENCORE database.

  • 57 RBPs can affect the levels of FBXL13.  








The Knockdown/knockout RNA-Seq assay for FBXL13 is not available on ENCORE database.





57 RBPs can affect the gene expression of FBXL13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FBXL13ENSG00000161040.12671.07480323.336701.0533013.6636011.13000K562AARS
FBXL13ENSG00000161040.12710.186501781.77920-1.3270049.4172047.05920K562AGGF1
FBXL13ENSG00000161040.12340.04510474.22360-0.479803.830102.02280K562AKAP1
FBXL13ENSG00000161040.121002.289301854.00770-0.8873015.7486013.96750K562AKAP8L
FBXL13ENSG00000161040.12655.23680852.72200-0.380102.636801.42800K562APOBEC3C
FBXL13ENSG00000161040.12319.84670943.37050-1.5604027.2500025.60690K562AQR
FBXL13ENSG00000161040.121010.971701945.27340-0.9442025.0381022.08810K562ATP5C1
FBXL13ENSG00000161040.12395.40980684.57530-0.791902.923101.82470K562CNOT7
FBXL13ENSG00000161040.12644.79140419.945800.618504.303003.32460K562CPSF6
FBXL13ENSG00000161040.12814.760601188.45730-0.544606.870905.35580K562CELF1
FBXL13ENSG00000161040.121564.903002090.51360-0.417803.695001.99930K562DDX19B
FBXL13ENSG00000161040.121495.509101995.13470-0.415806.221104.82440K562DKC1
FBXL13ENSG00000161040.121306.47530479.320101.4465044.6544042.48470K562EIF2S2
FBXL13ENSG00000161040.12535.44510966.41680-0.8519014.8005012.73330K562EIF4G2
FBXL13ENSG00000161040.12965.08190599.371400.687103.552701.72030K562FASTKD2
FBXL13ENSG00000161040.12340.75250522.12950-0.615705.696004.87300K562FXR1
FBXL13ENSG00000161040.12403.92360557.73030-0.465503.775202.45080K562GLRX3
FBXL13ENSG00000161040.12459.91650638.68330-0.473703.569402.71510K562GRSF1
FBXL13ENSG00000161040.12300.24270438.55510-0.546603.384002.19270K562HNRNPA1
FBXL13ENSG00000161040.12544.41250857.25450-0.655005.932104.05510K562HNRNPK
FBXL13ENSG00000161040.12427.53210656.93060-0.619705.886504.28400K562HNRNPL
FBXL13ENSG00000161040.121524.21100561.299101.4411031.6514029.32170K562HSPD1
FBXL13ENSG00000161040.12363.20130624.38560-0.781703.082901.57320K562ILF2
FBXL13ENSG00000161040.121133.067001967.61570-0.7962013.1655010.94020K562KIF1C
FBXL13ENSG00000161040.12560.90930342.552500.711306.436404.20050K562LARP7
FBXL13ENSG00000161040.12666.72040900.19970-0.433203.459402.41240K562MATR3
FBXL13ENSG00000161040.121363.917202204.21960-0.6925012.035309.91590K562MBNL1
FBXL13ENSG00000161040.12301.26350586.38220-0.9608014.1021012.44560K562MTPAP
FBXL13ENSG00000161040.12985.686801544.99390-0.648405.282903.92480K562NAA15
FBXL13ENSG00000161040.12765.029601057.16410-0.466604.146302.29900K562NOL12
FBXL13ENSG00000161040.12405.30150651.51500-0.684809.605308.32610K562NSUN2
FBXL13ENSG00000161040.12336.91720657.67290-0.965003.621502.19240K562PABPC1
FBXL13ENSG00000161040.12432.08730879.90940-1.026006.011104.38010K562PABPN1
FBXL13ENSG00000161040.12560.74160802.59370-0.517304.327703.09900K562PCBP2
FBXL13ENSG00000161040.12657.94210993.03300-0.593907.604605.42850K562PNPT1
FBXL13ENSG00000161040.12273.05700443.91760-0.701103.131402.27570K562POLR2G
FBXL13ENSG00000161040.12777.871001054.41060-0.438804.292003.28240K562PUF60
FBXL13ENSG00000161040.12863.269601098.87180-0.348103.572902.48210K562PUM2
FBXL13ENSG00000161040.12879.865401838.76930-1.0634018.9820017.59230K562PUS1
FBXL13ENSG00000161040.12880.20660593.789000.567802.866001.41810K562RAVER1
FBXL13ENSG00000161040.12741.385801791.51880-1.2729038.8606036.55430K562RBM15
FBXL13ENSG00000161040.12596.34990840.41820-0.494904.243403.17570K562RBM22
FBXL13ENSG00000161040.12549.00590381.212700.526103.207002.11960K562RPS3
FBXL13ENSG00000161040.12396.38810710.99580-0.842903.736701.60340K562SAFB2
FBXL13ENSG00000161040.12422.50080647.39730-0.615706.334105.00560K562SF3B4
FBXL13ENSG00000161040.12623.68750980.81100-0.653202.732701.44600K562SFPQ
FBXL13ENSG00000161040.12782.56350514.480700.605003.571401.71490K562SND1
FBXL13ENSG00000161040.12492.59120658.65710-0.419104.031002.92160K562SRPK2
FBXL13ENSG00000161040.12319.14950859.06730-1.4285027.9273025.68550K562SRSF1
FBXL13ENSG00000161040.12293.12570610.17600-1.057704.341102.29300K562STIP1
FBXL13ENSG00000161040.12688.81330869.48740-0.336102.137101.51060K562TARDBP
FBXL13ENSG00000161040.12431.60520603.57310-0.483802.848801.73820K562U2AF1
FBXL13ENSG00000161040.12425.64830623.22820-0.550104.503603.48380K562U2AF2
FBXL13ENSG00000161040.12874.179901864.21690-1.092608.103105.61160K562UTP18
FBXL13ENSG00000161040.12418.86830614.69130-0.553406.361605.12940K562WDR43
FBXL13ENSG00000161040.12844.869701117.69100-0.403703.742602.23190K562WRN
FBXL13ENSG00000161040.12716.421101062.75260-0.568905.376904.10830K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FBXL13 is not available on ENCORE database.





14 RBPs can affect the splicing of FBXL13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFBXL13ENSG00000161040.12chr7-102517913102518040102495223102495307102518777102518897-0.177000.000790.01725excludedK562SF3B4
SEFBXL13ENSG00000161040.12chr7-102524660102524759102524014102524132102553532102553662-0.053000.001190.03626excludedK562AKAP8L
SEFBXL13ENSG00000161040.12chr7-1024628291024628871024624861024626501024952231024953070.089000.001550.01768includedK562AQR
SEFBXL13ENSG00000161040.12chr7-102524660102524759102524014102524132102553532102553662-0.073000.000060.00154excludedK562PUS1
SEFBXL13ENSG00000161040.12chr7-102572327102572380102566720102566821102603979102604112-0.065000.003270.04480excludedK562PUS1
SEFBXL13ENSG00000161040.12chr7-102495223102495307102462486102462650102518777102518897-0.065000.004850.06084excludedK562PUS1
SEFBXL13ENSG00000161040.12chr7-102473286102473421102462486102462650102495223102495307-0.130000.000140.03190excludedK562LARP4
SEFBXL13ENSG00000161040.12chr7-102603979102604112102572327102572380102608468102608564-0.128000.000320.02673excludedK562HNRNPL
SEFBXL13ENSG00000161040.12chr7-102524660102524759102524014102524132102553532102553662-0.090000.000000.00009excludedK562UTP18
SEFBXL13ENSG00000161040.12chr7-102524660102524759102524014102524132102553532102553662-0.103000.003310.09222excludedK562TARDBP
SEFBXL13ENSG00000161040.12chr7-102572327102572380102566720102566821102608468102608564-0.052000.000090.00397excludedK562RBM15
SEFBXL13ENSG00000161040.12chr7-102495223102495307102462486102462650102518777102518897-0.072000.001990.04605excludedK562RBM15
SEFBXL13ENSG00000161040.12chr7-102603979102604112102572327102572380102608468102608564-0.072000.002700.05881excludedK562AGGF1
SEFBXL13ENSG00000161040.12chr7-102524660102524759102524014102524132102553532102553662-0.072000.000180.00705excludedK562AGGF1
SEFBXL13ENSG00000161040.12chr7-102495223102495307102473286102473421102517913102518040-0.092000.002510.05574excludedK562AGGF1
SEFBXL13ENSG00000161040.12chr7-1026039791026041121025723271025723801026084681026085640.073000.001640.05878includedK562PTBP1
A3SSFBXL13ENSG00000161040.12chr7-1025667291025668651025667291025668211025723271025724090.056000.007660.04199longerK562AQR
MXEFBXL13ENSG00000161040.12chr7-102462486102462650102473286102473421102453679102453978102495223102495307-0.084000.000360.034412includedK562LARP4
MXEFBXL13ENSG00000161040.12chr7-102462829102462887102473286102473421102462486102462650102495223102495307-0.223000.000720.006832includedK562AQR
MXEFBXL13ENSG00000161040.12chr7-102462486102462650102495223102495307102453721102453978102517913102518040-0.215000.001120.017382includedK562U2AF2
MXEFBXL13ENSG00000161040.12chr7-102572327102572380102603979102604112102566720102566821102608468102608564-0.181000.000120.018762includedK562CPSF6
MXEFBXL13ENSG00000161040.12chr7-1024624861024626501024952231024953071024537211024539781025179131025180400.276000.002460.049211includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FBXL13 is not avaliable on ENCORE database.