RP11-463D19.2

General Information

Gene Name       : RP11-463D19.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-463D19.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-463D19.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-463D19.2 RNA is bound by 27 proteins.  







eCLIP assay for RP11-463D19.2 is not avaliable on ENCORE database.





27 proteins are bound to RP11-463D19.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr87465051874650587-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.080346.80151HepG2BCLAF1
chr87465198574652016-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.581604.55944K562ZNF622
chr87465192074652016-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.238726.65960HepG2BCLAF1
chr87465053774650596-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.939683.65740K562U2AF2
chr87460088874600959-3'-UTR,CDS,intron-Distal,intron-Proximal3.480565.11155K562YBX3
chr87460092374601049-3'-UTR,CDS,intron-Distal,intron-Proximal4.1642311.64153HepG2BCLAF1
chr87465051674650585-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.525368.21285K562ZNF622
chr87465053474650601-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.247895.19836HepG2U2AF2
chr87465201674652081-3'-UTR,5'-UTR,CDS,intron-Distal4.522409.53697K562ZNF622
chr87460090074601019-3'-UTR,CDS,intron-Distal,intron-Proximal4.513736.03821HepG2GRWD1
chr87479097474791075-5'-UTR,CDS,intron-Distal,intron-Proximal3.665913.64037HepG2NCBP2
chr87479099774791061-5'-UTR,CDS,intron-Distal,intron-Proximal3.933745.64484HepG2PRPF8
chr87465843774658548-intron-Distal4.3640314.82168K562CSTF2T
chr87465905674659100-5'-UTR,intron-Distal,intron-Proximal3.185085.62058K562CSTF2T
chr87465823274658296-intron-Distal4.219648.80803HepG2CSTF2T
chr87464412774644176-intron-Distal3.053433.75707K562SAFB2
chr87465843774658511-intron-Distal5.2879515.23154HepG2FAM120A
chr87465856674658655-intron-Distal4.6922012.15448HepG2FAM120A
chr87479060674790696-intron-Distal4.535333.31384K562XRN2
chr87460088874600923-CDS,intron-Distal,intron-Proximal4.469144.70478HepG2BCLAF1
chr87465813574658183-intron-Distal3.592716.87013HepG2FAM120A
chr87465834974658404-intron-Distal3.386706.05986HepG2CSTF2T
chr87465886174658920-intron-Distal5.197839.23970HepG2CSTF2T
chr87465858874658647-intron-Distal4.891418.08715HepG2CSTF2T
chr87465716074657254-intron-Distal3.673745.83959K562KHSRP
chr87478963974789729-intron-Distal4.243305.16181K562PTBP1
chr87465821774658286-intron-Distal3.115313.15535K562EWSR1
chr87465822474658298-intron-Distal3.9591614.70410K562CSTF2T
chr87465832674658370-intron-Distal3.134513.68066K562DROSHA
chr87465812374658185-intron-Distal3.620379.88314K562CSTF2T
chr87476421374764314-intron-Distal3.208426.22789HepG2PCBP2
chr87465901674659064-5'-UTR,intron-Distal,intron-Proximal3.117363.12941K562UCHL5
chr87479062674790714-intron-Distal3.083534.65543HepG2NKRF
chr87460841974608509-intron-Distal3.430894.80898K562HNRNPM
chr87465843174658518-intron-Distal4.964436.68679HepG2GTF2F1
chr87461429374614351-intron-Distal5.037404.38664K562QKI
chr87465892174659002-intron-Distal5.195258.86792K562CSTF2T
chr87465870274658767-intron-Distal4.5138115.31488HepG2FAM120A
chr87465862174658679-intron-Distal4.276093.81568K562FAM120A
chr87465832874658402-intron-Distal4.011453.37829HepG2DROSHA
chr87460842674608517-intron-Distal4.132613.86368HepG2HNRNPM
chr87464039974640466-intron-Distal3.189573.87218K562SAFB2
chr87464839474648556-intron-Distal3.547365.83959K562KHSRP
chr87465869374658765-intron-Distal4.567467.10858K562DROSHA
chr87465865574658702-intron-Distal5.5838011.10871HepG2FAM120A
chr87470703174707095-intron-Distal4.040764.02766HepG2HNRNPC
chr87479080974790913-intron-Distal4.052377.23771HepG2CSTF2T
chr87470482874704933-3'-UTR,intron-Distal3.214555.83938K562KHSRP
chr87465858374658654-intron-Distal4.5329811.91445K562DROSHA
chr87478478474784858-intron-Distal3.101683.27276HepG2HNRNPL
chr87476194274762048-intron-Distal4.868884.38664K562QKI
chr87465899374659106-5'-UTR,intron-Distal,intron-Proximal3.518644.85956HepG2NCBP2
chr87461205274612098-intron-Distal4.933247.38693K562EXOSC5
chr87470259074702695-3'-UTR,intron-Distal4.778047.91159K562KHSRP
chr87465844474658550-intron-Distal5.4659512.38643HepG2PRPF4
chr87465867274658764-intron-Distal4.5606412.10411HepG2PRPF4
chr87464649374646609-intron-Distal3.998507.90970K562KHSRP
chr87465906474659128-5'-UTR,intron-Distal,intron-Proximal4.6597411.73878HepG2FAM120A
chr87479065574790687-intron-Distal3.618505.14745HepG2XRN2
chr87470644274706497-intron-Distal3.566613.91876HepG2U2AF2
chr87479076174790913-intron-Distal4.660295.35385HepG2PRPF4
chr87479076474790801-intron-Distal5.017685.55769HepG2XRN2
chr87478968474789736-intron-Distal4.391083.09122HepG2PTBP1
chr87465892074658998-intron-Distal4.0838211.74221HepG2CSTF2T
chr87465843974658520-intron-Distal3.538124.50730K562AKAP8L
chr87478973874789803-intron-Distal4.019575.16181K562PTBP1
chr87465813874658188-intron-Distal3.913163.29554HepG2GTF2F1
chr87465868074658768-intron-Distal4.652387.20259K562GTF2F1
chr87465851174658566-intron-Distal4.296195.44474HepG2FAM120A
chr87465826474658302-intron-Distal3.118383.00054HepG2PRPF4
chr87465907274659125-5'-UTR,intron-Distal,intron-Proximal3.325903.00054HepG2PRPF4
chr87479074974790815-intron-Distal3.166227.68772HepG2NKRF
chr87465859574658672-intron-Distal5.018409.34107HepG2PRPF4
chr87465813474658200-intron-Distal4.324399.31613HepG2CSTF2T
chr87479059974790655-intron-Distal4.040225.28966HepG2XRN2
chr87479082374790886-intron-Distal5.448938.40490HepG2NKRF
chr87465832374658395-intron-Distal5.6522513.82196K562CSTF2T
chr87465834474658396-intron-Distal3.255163.92899HepG2PRPF4
chr87479080174790949-intron-Distal4.093054.22598K562CSTF2T
chr87463051974630701-intron-Distal3.538784.76825K562KHSRP
chr87465869774658755-intron-Distal5.385969.75980K562CSTF2T
chr87461428174614359-intron-Distal3.721024.33990HepG2QKI
chr87465823874658285-intron-Distal4.709186.46885HepG2FAM120A
chr87476421074764294-intron-Distal4.622804.90095K562PTBP1
chr87470651674706576-intron-Distal4.140953.92684K562KHSRP
chr87465858674658688-intron-Distal4.3623915.27355K562CSTF2T
chr87465906874659117-5'-UTR,intron-Distal,intron-Proximal3.435905.67615K562GTF2F1
chr87465907874659128-5'-UTR,intron-Distal,intron-Proximal4.402769.31613HepG2CSTF2T
chr87464125174641312-intron-Distal3.766503.54264K562SAFB2
chr87465843974658545-intron-Distal3.7274211.17980HepG2CSTF2T
chr87465843874658540-intron-Distal5.6731210.62792K562GTF2F1
chr87463529774635370-intron-Distal4.046443.60944K562TARDBP
chr87464062774640699-intron-Distal4.234714.58306K562SAFB2
chr87465871174658759-intron-Distal4.314994.14518HepG2GTF2F1
chr87465846474658512-intron-Distal4.007677.33270K562DROSHA
chr87464346474643574-intron-Distal4.058983.33164K562SAFB2
chr87465858774658680-intron-Distal5.5961410.32927K562GTF2F1
chr87470629374706385-3'-UTR,CDS,intron-Distal3.370453.42396HepG2U2AF2
chr87465814274658201-intron-Distal4.068763.86024K562EWSR1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-463D19.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-463D19.2 is not available on ENCORE database.

  • 40 RBPs can affect the levels of RP11-463D19.2.  








The Knockdown/knockout RNA-Seq assay for RP11-463D19.2 is not available on ENCORE database.





40 RBPs can affect the gene expression of RP11-463D19.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-463D19.2ENSG00000258677.286.0180013.402502.682007.363206.54040HepG2AKAP1
RP11-463D19.2ENSG00000258677.255.7530026.570801.069102.123001.50790HepG2AUH
RP11-463D19.2ENSG00000258677.230.075308.788801.774702.560101.98140HepG2BOP1
RP11-463D19.2ENSG00000258677.237.249708.069002.206703.919003.11400HepG2CPSF6
RP11-463D19.2ENSG00000258677.246.9345014.027401.742302.956002.29540HepG2CELF1
RP11-463D19.2ENSG00000258677.259.879709.147902.710507.303706.29450HepG2GPKOW
RP11-463D19.2ENSG00000258677.234.056306.969202.288803.459502.40460HepG2HNRNPM
RP11-463D19.2ENSG00000258677.228.767900.0000099999.999905.483002.29850HepG2NPM1
RP11-463D19.2ENSG00000258677.20.0000019.09970-99999.999993.934803.14140HepG2RBM25
RP11-463D19.2ENSG00000258677.281.0500037.421801.114802.787202.10200HepG2RPLP0
RP11-463D19.2ENSG00000258677.216.272501.971603.044902.678602.07270HepG2RPS19
RP11-463D19.2ENSG00000258677.20.0000020.23550-99999.999994.101703.40500HepG2SF3B4
RP11-463D19.2ENSG00000258677.216.475200.0000099999.999903.577701.87650HepG2SFPQ
RP11-463D19.2ENSG00000258677.224.023700.0000099999.999904.106702.43450HepG2SNRNP200
RP11-463D19.2ENSG00000258677.20.0000021.11580-99999.999994.233503.67900HepG2SRSF1
RP11-463D19.2ENSG00000258677.242.3777014.088201.588701.952001.41480HepG2SRSF5
RP11-463D19.2ENSG00000258677.20.0000017.17400-99999.999993.599802.98880HepG2SRSF9
RP11-463D19.2ENSG00000258677.240.1734016.009801.327201.980401.43720HepG2SUCLG1
RP11-463D19.2ENSG00000258677.213.685400.0000099999.999902.219601.34670HepG2U2AF2
RP11-463D19.2ENSG00000258677.257.6919019.929401.533404.227603.58990HepG2ZNF622
RP11-463D19.2ENSG00000258677.231.172301.133204.781705.903604.29260K562CNOT7
RP11-463D19.2ENSG00000258677.231.161205.980202.381403.621102.72500K562CPSF6
RP11-463D19.2ENSG00000258677.20.0000030.99600-99999.999999.386707.57000K562DKC1
RP11-463D19.2ENSG00000258677.215.316502.151602.831502.397601.44250K562EIF3D
RP11-463D19.2ENSG00000258677.20.000006.93930-99999.999992.155101.42630K562EIF4A3
RP11-463D19.2ENSG00000258677.28.2010028.00990-1.772102.315201.45100K562EIF4G2
RP11-463D19.2ENSG00000258677.225.485101.058204.589805.198803.03970K562HNRNPAB
RP11-463D19.2ENSG00000258677.233.9619010.937201.634602.702401.78440K562HNRNPM
RP11-463D19.2ENSG00000258677.214.313400.0000099999.999904.367301.94900K562KHSRP
RP11-463D19.2ENSG00000258677.27.237400.0000099999.999902.226901.40700K562MATR3
RP11-463D19.2ENSG00000258677.240.677101.088605.223509.058906.82860K562PABPC1
RP11-463D19.2ENSG00000258677.224.448401.004404.605304.621402.29170K562PPIL4
RP11-463D19.2ENSG00000258677.20.0000015.91830-99999.999995.037802.57510K562PRPF6
RP11-463D19.2ENSG00000258677.20.0000032.49120-99999.999999.601607.54660K562PUM1
RP11-463D19.2ENSG00000258677.24.3994028.56640-2.698903.045302.47990K562PUS1
RP11-463D19.2ENSG00000258677.218.500800.0000099999.999906.196404.87450K562RBM22
RP11-463D19.2ENSG00000258677.221.124201.006604.391204.386702.35530K562RPS3A
RP11-463D19.2ENSG00000258677.221.595401.055504.354704.662102.34560K562SMN1
RP11-463D19.2ENSG00000258677.20.0000015.49900-99999.999995.036502.30420K562SMNDC1
RP11-463D19.2ENSG00000258677.212.336200.0000099999.999903.699002.88670K562SRSF1
RP11-463D19.2ENSG00000258677.216.647800.0000099999.999905.491503.92180K562SRSF5
RP11-463D19.2ENSG00000258677.211.388900.0000099999.999903.599902.78920K562TARDBP
RP11-463D19.2ENSG00000258677.29.612800.0000099999.999902.960902.11040K562TIA1
RP11-463D19.2ENSG00000258677.20.5334013.04510-4.612102.606701.75460K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-463D19.2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-463D19.2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-463D19.2 is not avaliable on ENCORE database.