PRPF6

General Information

Gene Name : PRPF6
Gene ID : ENSG00000101161.7
Essential Gene : Yes

Functions

Splicing regulation
Spliceosome

Localization(RBPImage: PRPF6)

Nuclei
Nucleoplasm
Mutually Exclusive from Nucleolus
Speckles
Cytoplasm
Compartment/Organelle
Unknown Cyto Foci
Cytosolic
Nuclear release mitosis

Domains (AlphaFold: PRPF6)

No checked domain (RRM, ZNF, KH, Helicase, Nuclease, dRBM or PUM_HD)

Antibody Validation

Bethyl Labs: A302-773A

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PRPF6	ENSG00000101161.7	33.74	50.29	42.02	ENCSR000AEF
HepG2	PRPF6	ENSG00000101161.7	149.33	91.48	120.41	ENCSR985KAT
K562	PRPF6	ENSG00000101161.7	49.27	43.85	46.56	ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	PRPF6-BGKLV13-K562	ENCSR783LUA	PRPF6	K562	Released		ENCSR815CVQ	shRNA	KD% = 85.5,86.8
knockdown followed by RNA-seq	PRPF6-BGHLV14-HepG2	ENCSR529QEZ	PRPF6	HepG2	Released		ENCSR491FOC	shRNA	KD% = 49.7,52.5

eCLIP

No eCLIP experiment available

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
PRPF6	ENCAB729OTZ	A302-773A	1		Released, ENCODE3	Released, ENCODE3	BGHLV14-31, Released, ENCODE3	BGKLV13-9, Released, ENCODE3

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
PRPF6	K562	shRNA	ENCSR783LUA	ENCSR815CVQ	PRPF6_BGKLV13_9,PRPF6_BGKLV13_10	NT_BGKLV13_1,NT_BGKLV13_2	85.5,86.8	Released	ENCODE3
PRPF6	HepG2	shRNA	ENCSR529QEZ	ENCSR491FOC	PRPF6_BGHLV14-31,PRPF6_BGHLV14-32	NT_BGHLV14-1,NT_BGHLV14-2	49.7,52.5	Released	ENCODE3

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

PRPF6: Click to RBP Image Database

Nuclei

Nucleoplasm

Mutually Exclusive from Nucleolus

Speckles

Cytoplasm

Compartment/Organelle

Unknown Cyto Foci

Cytosolic

Nuclear release mitosis

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
PRPF6	Product_ID: A302-773A Lot_ID: 1 Source: Bethyl Labs Target Name: PRPF6-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PRPF6 is not avaliable on ENCORE database.

Proteins bound to RNA

PRPF6 RNA is bound by 49 proteins.

eCLIP assay for PRPF6 is not avaliable on ENCORE database.

49 proteins are bound to PRPF6 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	62664367	62664392	+	3'-UTR	3.22285	3.34231	K562	RBM15
chr20	62664339	62664424	+	3'-UTR,CDS	3.88947	7.21622	HepG2	LARP4
chr20	62612561	62612621	+	5'-UTR,CDS	4.16302	36.54477	HepG2	GRWD1
chr20	62612497	62612534	+	5'-UTR	3.90483	4.80676	K562	RBM15
chr20	62663275	62663290	+	CDS	5.66762	15.28330	K562	LIN28B
chr20	62660759	62660762	+	CDS	3.71285	9.86479	HepG2	PPIG
chr20	62663296	62663330	+	CDS	4.10604	12.96413	HepG2	LIN28B
chr20	62624798	62624836	+	CDS	3.47834	6.08625	HepG2	FXR2
chr20	62659832	62659898	+	CDS	4.05279	7.42463	HepG2	PABPN1
chr20	62641644	62641671	+	CDS	3.96501	5.87392	HepG2	ZNF800
chr20	62664191	62664284	+	CDS,intron-Proximal	3.57982	7.40104	HepG2	LSM11
chr20	62614398	62614425	+	CDS,intron-Proximal	3.55300	15.62797	K562	UCHL5
chr20	62624757	62624834	+	CDS,intron-Proximal	4.48019	9.04629	HepG2	TRA2A
chr20	62626286	62626336	+	CDS	4.75407	16.52049	HepG2	BCLAF1
chr20	62663289	62663296	+	CDS	4.36844	12.41710	HepG2	LIN28B
chr20	62657343	62657396	+	CDS,intron-Distal	5.84719	15.04696	K562	LIN28B
chr20	62664193	62664207	+	CDS,intron-Proximal	3.80025	3.15159	HepG2	LARP4
chr20	62612611	62612667	+	CDS	3.16666	7.38214	K562	PUM1
chr20	62663290	62663337	+	CDS	6.66112	31.08685	K562	LIN28B
chr20	62612612	62612643	+	CDS	3.01477	12.44499	K562	UCHL5
chr20	62659831	62659875	+	CDS	3.78297	4.36276	HepG2	LARP4
chr20	62624823	62624870	+	CDS,intron-Proximal	3.61781	9.52203	HepG2	PRPF8
chr20	62641635	62641671	+	CDS	4.59889	9.91988	K562	FMR1
chr20	62626423	62626443	+	CDS	4.09648	5.89622	K562	FXR2
chr20	62614398	62614424	+	CDS,intron-Proximal	3.95998	16.45614	HepG2	GRWD1
chr20	62614399	62614422	+	CDS,intron-Proximal	4.17689	12.07556	HepG2	PPIG
chr20	62614373	62614410	+	CDS,intron-Proximal	5.43505	8.88638	HepG2	AQR
chr20	62659780	62659835	+	CDS,intron-Proximal	4.51894	8.45091	HepG2	SF3B4
chr20	62612620	62612669	+	CDS	3.05484	6.36360	HepG2	UCHL5
chr20	62648154	62648170	+	CDS	3.32100	5.77413	K562	DDX24
chr20	62655969	62656042	+	CDS	4.05871	9.23400	HepG2	DDX3X
chr20	62658443	62658469	+	CDS	4.76686	6.94434	K562	GRWD1
chr20	62626685	62626766	+	CDS	3.59837	14.23030	K562	PUM1
chr20	62626816	62626834	+	CDS	3.82518	11.58254	K562	ZNF622
chr20	62663345	62663369	+	CDS	4.17131	4.15208	K562	RBM15
chr20	62659919	62659957	+	CDS,intron-Proximal	5.57927	8.52745	HepG2	AQR
chr20	62624791	62624837	+	CDS	4.78976	25.07290	K562	UCHL5
chr20	62641661	62641712	+	CDS,intron-Proximal	4.03375	15.41078	HepG2	PRPF8
chr20	62626814	62626833	+	CDS	3.87394	3.21664	HepG2	UCHL5
chr20	62630957	62631008	+	CDS	5.01296	8.55954	K562	LIN28B
chr20	62641658	62641670	+	CDS	3.03251	4.10104	K562	GRWD1
chr20	62626268	62626349	+	CDS,intron-Proximal	3.61381	17.77624	K562	ZNF800
chr20	62658369	62658391	+	CDS	4.07690	7.76216	HepG2	G3BP1
chr20	62658391	62658435	+	CDS	4.60896	9.38999	HepG2	G3BP1
chr20	62616350	62616375	+	CDS	3.16285	6.56233	K562	PUM1
chr20	62612644	62612669	+	CDS	4.94476	28.35512	HepG2	GRWD1
chr20	62612621	62612644	+	CDS	4.39204	26.00063	HepG2	GRWD1
chr20	62659831	62659842	+	CDS	4.52403	9.69911	HepG2	GRWD1
chr20	62657345	62657402	+	CDS,intron-Distal	3.60423	8.47157	HepG2	LIN28B
chr20	62626271	62626286	+	CDS	4.77281	11.47391	HepG2	BCLAF1
chr20	62614374	62614417	+	CDS,intron-Proximal	3.46542	10.10185	HepG2	PRPF8
chr20	62659842	62659855	+	CDS	4.74159	5.42280	K562	FXR2
chr20	62612636	62612653	+	CDS	4.17926	4.88910	K562	ZNF800
chr20	62657279	62657317	+	CDS,intron-Distal,intron-Proximal	4.96379	7.23427	HepG2	AQR
chr20	62659073	62659089	+	CDS	4.06128	10.93752	HepG2	GRWD1
chr20	62624788	62624835	+	CDS	3.63451	12.28203	HepG2	BCLAF1
chr20	62631011	62631032	+	CDS	3.68641	3.15816	HepG2	PRPF4
chr20	62642630	62642651	+	CDS,intron-Proximal	3.29931	6.41344	HepG2	PRPF8
chr20	62626326	62626347	+	CDS	3.75092	3.52118	K562	XRCC6
chr20	62659915	62659950	+	CDS,intron-Proximal	4.50536	11.17766	HepG2	PRPF8
chr20	62641633	62641667	+	CDS	3.30274	6.92553	HepG2	G3BP1
chr20	62657356	62657396	+	CDS,intron-Distal	3.28965	5.65938	K562	FXR2
chr20	62642641	62642648	+	CDS	3.37434	7.87154	HepG2	PPIG
chr20	62614382	62614425	+	CDS,intron-Proximal	3.35094	5.97015	HepG2	EFTUD2
chr20	62614377	62614424	+	CDS,intron-Proximal	3.40717	12.96908	HepG2	BUD13
chr20	62656017	62656088	+	CDS,intron-Proximal	4.20478	33.96985	HepG2	PRPF8
chr20	62612648	62612669	+	CDS	3.59520	23.83310	K562	ZNF622
chr20	62632455	62632504	+	CDS	4.56622	13.85045	HepG2	RPS3
chr20	62612647	62612669	+	CDS	3.90148	17.39147	K562	UCHL5
chr20	62626265	62626332	+	CDS,intron-Proximal	3.48270	4.74262	HepG2	FTO
chr20	62626804	62626835	+	CDS	4.36915	12.05445	HepG2	GRWD1
chr20	62641649	62641660	+	CDS	4.50619	11.98386	HepG2	GRWD1
chr20	62663286	62663322	+	CDS	4.24993	4.18170	HepG2	PABPN1
chr20	62648149	62648192	+	CDS	4.02353	3.80401	K562	SRSF1
chr20	62663274	62663288	+	CDS	3.73512	8.01766	HepG2	LIN28B
chr20	62660820	62660839	+	CDS	3.59193	11.35339	HepG2	PPIG
chr20	62626401	62626423	+	CDS	5.08063	7.22868	K562	FXR2
chr20	62616282	62616308	+	CDS	3.67403	9.79481	K562	UCHL5
chr20	62632591	62632625	+	CDS,intron-Proximal	4.29458	9.97647	HepG2	PRPF8
chr20	62626401	62626438	+	CDS	4.30664	13.16675	HepG2	GRWD1
chr20	62659834	62659852	+	CDS	3.21119	3.25727	K562	METAP2
chr20	62624793	62624837	+	CDS	3.38199	13.12065	K562	ZNF800
chr20	62664200	62664285	+	CDS	3.67055	10.76369	HepG2	DDX55
chr20	62642637	62642648	+	CDS,intron-Proximal	3.79426	4.65332	HepG2	ZNF800
chr20	62614399	62614415	+	CDS,intron-Proximal	3.65324	6.13211	HepG2	UCHL5
chr20	62612668	62612711	+	CDS,intron-Proximal	4.40872	13.40522	HepG2	PRPF8
chr20	62626392	62626441	+	CDS	3.50737	12.84442	HepG2	BCLAF1
chr20	62642829	62642891	+	CDS,intron-Proximal	3.99727	22.20346	HepG2	PRPF8
chr20	62624782	62624838	+	CDS	3.81072	6.27104	HepG2	FTO
chr20	62631026	62631048	+	CDS	4.63373	13.11867	HepG2	GRWD1
chr20	62658435	62658466	+	CDS	4.31276	9.10244	HepG2	G3BP1
chr20	62663332	62663399	+	CDS,intron-Proximal	5.44321	11.15381	K562	PABPC4
chr20	62641638	62641670	+	CDS	3.50907	15.19416	HepG2	PPIG
chr20	62659087	62659132	+	CDS,intron-Proximal	3.94483	13.31241	HepG2	PRPF8
chr20	62663340	62663388	+	CDS	3.24189	5.38978	HepG2	PABPN1
chr20	62624785	62624835	+	CDS	3.33122	17.80438	K562	ZNF622
chr20	62614399	62614419	+	CDS,intron-Proximal	5.15109	16.17295	K562	ZNF622
chr20	62659909	62659953	+	CDS,intron-Proximal	5.45840	7.24749	HepG2	EFTUD2
chr20	62624789	62624834	+	CDS	3.35478	5.01555	K562	MTPAP
chr20	62626269	62626332	+	CDS	3.68655	12.20946	K562	UCHL5
chr20	62664220	62664328	+	CDS	5.00208	12.62979	HepG2	LARP4
chr20	62614367	62614417	+	CDS,intron-Proximal	4.73291	12.86643	K562	AQR
chr20	62614405	62614416	+	CDS	3.60048	4.19763	K562	DDX24
chr20	62652922	62653014	+	intron-Distal	6.69621	17.92721	K562	EIF4G2
chr20	62659350	62659396	+	intron-Distal	3.58626	7.67822	HepG2	PRPF4
chr20	62652821	62652922	+	intron-Distal	6.48109	28.60237	K562	EIF4G2
chr20	62653099	62653165	+	intron-Distal	6.41588	16.43293	K562	EIF4G2
chr20	62653316	62653372	+	intron-Distal	6.85146	18.42588	K562	EIF4G2
chr20	62653207	62653253	+	intron-Distal	4.47838	5.44904	K562	TARDBP
chr20	62661562	62661641	+	intron-Distal	4.51216	5.39781	HepG2	NKRF
chr20	62653369	62653419	+	intron-Distal	5.14102	6.72851	K562	AATF
chr20	62652815	62652896	+	intron-Distal	5.05904	10.30629	K562	AATF
chr20	62653372	62653429	+	intron-Distal	6.67589	16.43293	K562	EIF4G2
chr20	62659319	62659350	+	intron-Distal	3.20052	5.12435	HepG2	PRPF4
chr20	62652492	62652583	+	intron-Distal	5.36914	10.78698	K562	TARDBP
chr20	62638821	62638881	+	intron-Distal	4.80599	4.35687	HepG2	DDX59
chr20	62653197	62653268	+	intron-Distal	6.98534	20.42309	K562	EIF4G2
chr20	62644769	62644859	+	intron-Distal	3.37687	4.12870	K562	PTBP1
chr20	62653307	62653396	+	intron-Distal	3.30398	3.77798	HepG2	IGF2BP1
chr20	62652810	62652873	+	intron-Distal	4.99266	8.61835	K562	TARDBP
chr20	62635737	62635778	+	intron-Distal	4.25457	4.38558	HepG2	HNRNPM
chr20	62652485	62652563	+	intron-Distal	4.46092	5.92150	HepG2	STAU2
chr20	62652763	62652810	+	intron-Distal	5.18399	6.29945	HepG2	XPO5
chr20	62653105	62653156	+	intron-Distal	4.30786	5.08344	K562	TARDBP
chr20	62635524	62635638	+	intron-Distal	5.76254	11.52296	HepG2	HNRNPM
chr20	62652735	62652784	+	intron-Distal	5.26840	11.93667	K562	EIF4G2
chr20	62638737	62638807	+	intron-Distal	5.04335	5.96444	HepG2	PCBP2
chr20	62653197	62653256	+	intron-Distal	5.49185	10.08945	HepG2	DKC1
chr20	62657153	62657193	+	intron-Distal,intron-Proximal	4.68039	4.40745	K562	SF3B4
chr20	62653286	62653312	+	intron-Distal	5.46438	7.07160	K562	EIF4G2
chr20	62652820	62652875	+	intron-Distal	4.96679	9.91231	HepG2	DKC1
chr20	62652957	62653015	+	intron-Distal	6.34423	9.14790	HepG2	DKC1
chr20	62652712	62652810	+	intron-Distal	5.56956	13.42901	K562	TARDBP
chr20	62638829	62638874	+	intron-Distal	4.54746	5.14122	HepG2	PCBP2
chr20	62653357	62653436	+	intron-Distal	5.14599	9.06027	K562	TARDBP
chr20	62652583	62652633	+	intron-Distal	3.79574	4.65797	K562	TARDBP
chr20	62652590	62652654	+	intron-Distal	5.08695	5.95110	HepG2	DKC1
chr20	62653365	62653451	+	intron-Distal	3.92707	3.35850	HepG2	TIAL1
chr20	62659335	62659405	+	intron-Distal	3.25541	3.68010	HepG2	GTF2F1
chr20	62653195	62653416	+	intron-Distal	5.33374	5.36549	HepG2	SRSF7
chr20	62652896	62652957	+	intron-Distal	5.96056	6.69377	HepG2	DKC1
chr20	62653378	62653458	+	intron-Distal	4.30757	5.23073	HepG2	STAU2
chr20	62652646	62652712	+	intron-Distal	5.10418	8.89278	K562	TARDBP
chr20	62652829	62652906	+	intron-Distal	4.05858	4.15622	HepG2	TIAL1
chr20	62652592	62652692	+	intron-Distal	3.10205	3.15019	HepG2	IGF2BP1
chr20	62631117	62631154	+	intron-Proximal	4.94556	5.26064	K562	AQR
chr20	62659923	62659957	+	intron-Proximal	3.99211	4.98250	K562	AQR
chr20	62632618	62632668	+	intron-Proximal	3.66976	5.45925	HepG2	RBM22
chr20	62656062	62656087	+	intron-Proximal	5.88975	8.34710	K562	AQR
chr20	62658287	62658327	+	intron-Proximal	4.15192	3.01266	HepG2	SF3B4
chr20	62641676	62641711	+	intron-Proximal	5.29553	15.39065	K562	AQR
chr20	62654242	62654256	+	intron-Proximal	4.81808	6.69228	HepG2	PRPF8
chr20	62641671	62641676	+	intron-Proximal	6.18827	15.35700	K562	AQR
chr20	62659124	62659172	+	intron-Proximal	3.44145	5.69108	HepG2	RBM22
chr20	62660668	62660723	+	intron-Proximal	3.86451	6.74156	HepG2	SF3B4
chr20	62659777	62659827	+	intron-Proximal	5.02169	10.45858	HepG2	SF3A3
chr20	62660849	62660863	+	intron-Proximal	4.24144	7.13970	HepG2	PRPF8
chr20	62660676	62660706	+	intron-Proximal	5.51943	6.40247	K562	SF3B4
chr20	62632592	62632639	+	intron-Proximal	5.44234	6.75320	K562	AQR
chr20	62656048	62656075	+	intron-Proximal	3.47866	3.39008	HepG2	AQR
chr20	62612676	62612706	+	intron-Proximal	4.07499	5.90528	HepG2	AQR
chr20	62656046	62656062	+	intron-Proximal	4.76633	8.01338	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for PRPF6 is not avaliable on ENCORE database.

Diffrential Expression

1,863 differentially expressed genes after Knockdown/Knockout PRPF6 protein.

79 RBPs can affect the levels of PRPF6.

1,863 differentially expressed genes after Knockdown/Knockout PRPF6 protein :

Only display 100 entries as example. Please click "View All" button to see all 1,863 entries.

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TFPI	ENSG00000003436.10	4612.10550	10012.42870	-1.11830	5.77710	4.07560	HepG2	PRPF6
SLC7A2	ENSG00000003989.12	2912.64650	7127.90390	-1.29110	7.06630	5.20510	HepG2	PRPF6
AK2	ENSG00000004455.12	2573.12850	3554.62860	-0.46620	2.77500	1.55650	HepG2	PRPF6
FKBP4	ENSG00000004478.5	954.48690	1579.23770	-0.72640	5.40090	3.73950	HepG2	PRPF6
CROT	ENSG00000005469.7	478.39810	221.83360	1.10860	8.11180	6.13280	HepG2	PRPF6
IBTK	ENSG00000005700.10	1592.12830	2446.32820	-0.61970	4.36050	2.84970	HepG2	PRPF6
ZNF195	ENSG00000005801.12	716.42320	443.90090	0.69050	4.20220	2.71640	HepG2	PRPF6
ITGA2B	ENSG00000005961.13	10.27490	38.90630	-1.92090	3.58780	2.21130	HepG2	PRPF6
BAIAP2L1	ENSG00000006453.9	516.15340	793.48210	-0.62040	3.61680	2.23480	HepG2	PRPF6
JHDM1D	ENSG00000006459.6	1070.67730	2119.02800	-0.98490	3.32370	1.99650	HepG2	PRPF6
IFRD1	ENSG00000006652.9	1108.53200	535.63800	1.04920	9.59440	7.47550	HepG2	PRPF6
ADIPOR2	ENSG00000006831.9	1782.73550	3321.84600	-0.89790	8.60770	6.56640	HepG2	PRPF6
ADAM22	ENSG00000008277.10	444.41680	290.89450	0.61130	2.92950	1.67810	HepG2	PRPF6
AASS	ENSG00000008311.10	1024.43230	605.33940	0.75890	5.33060	3.68400	HepG2	PRPF6
CRY1	ENSG00000008405.7	481.24250	318.99870	0.59310	2.86870	1.62890	HepG2	PRPF6
IL32	ENSG00000008517.12	1384.77470	1997.10220	-0.52830	3.22230	1.91310	HepG2	PRPF6
MAPK8IP2	ENSG00000008735.10	529.50790	46.80910	3.49970	50.49480	46.82200	HepG2	PRPF6
UBE3C	ENSG00000009335.13	876.29200	1394.73480	-0.67050	4.59800	3.05560	HepG2	PRPF6
REV3L	ENSG00000009413.11	2209.46930	1505.08730	0.55380	3.52830	2.16300	HepG2	PRPF6
SPRTN	ENSG00000010072.11	283.69140	159.67560	0.82910	3.99480	2.54240	HepG2	PRPF6
DYRK4	ENSG00000010219.9	294.80860	174.25460	0.75850	3.52400	2.16000	HepG2	PRPF6
CD9	ENSG00000010278.7	131.79230	258.16790	-0.97000	4.94490	3.35280	HepG2	PRPF6
GIPR	ENSG00000010310.4	24.32270	62.93500	-1.37160	3.32590	1.99800	HepG2	PRPF6
SEMA3G	ENSG00000010319.2	396.48900	689.05060	-0.79730	3.60000	2.22190	HepG2	PRPF6
CD4	ENSG00000010610.5	55.41200	125.79450	-1.18280	4.40790	2.88870	HepG2	PRPF6
HIVEP2	ENSG00000010818.4	700.86490	1325.17810	-0.91900	6.66920	4.85500	HepG2	PRPF6
TSPAN9	ENSG00000011105.7	654.70710	921.51020	-0.49320	2.54110	1.36940	HepG2	PRPF6
NR1H4	ENSG00000012504.9	1510.72810	959.97100	0.65410	4.44080	2.91730	HepG2	PRPF6
CALCOCO1	ENSG00000012822.11	700.09960	1024.74030	-0.54960	3.14350	1.85380	HepG2	PRPF6
EHD3	ENSG00000013016.10	48.14980	15.35250	1.64900	3.42750	2.08110	HepG2	PRPF6
PGM3	ENSG00000013375.11	1930.40440	2620.62960	-0.44100	2.48950	1.32910	HepG2	PRPF6
DPEP1	ENSG00000015413.5	332.73630	125.80500	1.40310	4.28740	2.78670	HepG2	PRPF6
RALBP1	ENSG00000017797.7	293.96630	1289.76060	-2.13340	34.06340	30.64590	HepG2	PRPF6
WWTR1	ENSG00000018408.10	1712.20730	2771.45980	-0.69480	5.38450	3.72710	HepG2	PRPF6
CD74	ENSG00000019582.10	2658.06050	1518.88810	0.80730	6.99440	5.14380	HepG2	PRPF6
ZRANB1	ENSG00000019995.6	675.16960	978.85210	-0.53580	2.96850	1.71110	HepG2	PRPF6
SERPINB1	ENSG00000021355.8	1273.95080	1828.77620	-0.52160	3.14820	1.85680	HepG2	PRPF6
CYP3A43	ENSG00000021461.12	105.92470	40.33080	1.39300	4.91940	3.33090	HepG2	PRPF6
CPS1	ENSG00000021826.10	2680.08210	1541.56560	0.79780	6.75630	4.93110	HepG2	PRPF6
RB1CC1	ENSG00000023287.8	1516.78290	2204.36510	-0.53930	3.41280	2.07010	HepG2	PRPF6
FAS	ENSG00000026103.15	349.94590	204.08190	0.77790	3.96570	2.51830	HepG2	PRPF6
RNASET2	ENSG00000026297.11	1660.73360	3804.70000	-1.19600	14.28000	11.86730	HepG2	PRPF6
ARNTL2	ENSG00000029153.10	517.71240	323.50220	0.67830	3.66620	2.27540	HepG2	PRPF6
BAK1	ENSG00000030110.8	507.36050	341.63860	0.57040	2.78930	1.56830	HepG2	PRPF6
SARS	ENSG00000031698.8	1914.04130	1401.20960	0.44980	2.46150	1.30780	HepG2	PRPF6
RNF19A	ENSG00000034677.7	843.04770	1672.66280	-0.98850	3.03170	1.76380	HepG2	PRPF6
USP2	ENSG00000036672.11	381.18920	196.48820	0.95600	5.84910	4.14110	HepG2	PRPF6
CDH1	ENSG00000039068.14	484.71750	1085.46680	-1.16310	11.51470	9.24680	HepG2	PRPF6
SPDL1	ENSG00000040275.12	795.87810	511.08410	0.63890	3.80100	2.38210	HepG2	PRPF6
CAPG	ENSG00000042493.11	124.58790	62.53570	0.99430	3.32760	1.99930	HepG2	PRPF6
CUL7	ENSG00000044090.4	1382.62870	2249.13660	-0.70200	3.43180	2.08460	HepG2	PRPF6
PHKA2	ENSG00000044446.7	2377.07060	3887.31470	-0.70960	5.76460	4.06500	HepG2	PRPF6
HSPA5	ENSG00000044574.7	18142.01940	27057.38070	-0.57670	4.23240	2.73980	HepG2	PRPF6
DSG2	ENSG00000046604.8	3307.92200	5037.69900	-0.60680	4.43970	2.91700	HepG2	PRPF6
CP	ENSG00000047457.9	19402.29750	41593.42060	-1.10010	4.14580	2.66730	HepG2	PRPF6
C12orf4	ENSG00000047621.7	338.56910	202.73290	0.73980	3.60480	2.22520	HepG2	PRPF6
CC2D2A	ENSG00000048342.11	252.58290	158.40220	0.67310	2.72700	1.51600	HepG2	PRPF6
RRM2B	ENSG00000048392.7	2016.32680	1084.29060	0.89490	8.02060	6.05020	HepG2	PRPF6
H6PD	ENSG00000049239.8	1366.37200	2211.99740	-0.69500	5.25390	3.61620	HepG2	PRPF6
EPN3	ENSG00000049283.13	44.18420	10.25180	2.10760	4.41780	2.89740	HepG2	PRPF6
RCN1	ENSG00000049449.4	808.63250	1335.53760	-0.72390	5.25220	3.61560	HepG2	PRPF6
PIK3CB	ENSG00000051382.4	757.25310	1234.73260	-0.70540	3.24960	1.93710	HepG2	PRPF6
FNIP2	ENSG00000052795.8	699.56940	1375.95850	-0.97590	7.09350	5.22830	HepG2	PRPF6
FOXN3	ENSG00000053254.11	2924.05160	4590.66810	-0.65070	4.99080	3.38920	HepG2	PRPF6
LAMA3	ENSG00000053747.11	246.17230	99.39160	1.30840	5.40030	3.73950	HepG2	PRPF6
PLEKHH1	ENSG00000054690.9	583.33240	832.23390	-0.51270	2.69450	1.48980	HepG2	PRPF6
C4orf27	ENSG00000056050.6	312.85560	176.87700	0.82270	4.11510	2.64330	HepG2	PRPF6
F7	ENSG00000057593.9	443.45480	677.25970	-0.61090	3.40070	2.05980	HepG2	PRPF6
USP13	ENSG00000058056.4	539.90340	1674.84250	-1.63330	7.35190	5.45580	HepG2	PRPF6
PSD	ENSG00000059915.12	41.93680	10.75180	1.96350	3.83870	2.41450	HepG2	PRPF6
CCAR1	ENSG00000060339.9	2935.18920	2069.36930	0.50420	2.55730	1.38200	HepG2	PRPF6
BCAT1	ENSG00000060982.10	1789.83850	1083.39130	0.72420	5.42020	3.75690	HepG2	PRPF6
SPAG4	ENSG00000061656.5	197.21960	548.15550	-1.47480	3.92280	2.48460	HepG2	PRPF6
DGAT2	ENSG00000062282.10	1599.16440	633.93240	1.33480	15.80970	13.33560	HepG2	PRPF6
MED29	ENSG00000063322.9	1054.03940	707.62620	0.57480	3.40060	2.05980	HepG2	PRPF6
TM7SF3	ENSG00000064115.6	2642.64010	1745.22650	0.59850	4.08920	2.62220	HepG2	PRPF6
HIPK2	ENSG00000064393.11	3678.42580	5439.15250	-0.56430	3.90040	2.46820	HepG2	PRPF6
BCAS1	ENSG00000064787.8	79.18120	137.64690	-0.79770	2.55770	1.38200	HepG2	PRPF6
NTN1	ENSG00000065320.4	40.88760	6.22660	2.71510	5.63860	3.94910	HepG2	PRPF6
ERBB3	ENSG00000065361.10	4591.92880	10462.83400	-1.18810	15.26690	12.82460	HepG2	PRPF6
ADAT1	ENSG00000065457.6	435.89360	274.99170	0.66450	3.33740	2.00710	HepG2	PRPF6
PDIA5	ENSG00000065485.13	1112.93650	1570.50760	-0.49690	2.84920	1.61450	HepG2	PRPF6
MYLK	ENSG00000065534.14	1398.70190	847.39190	0.72290	5.23400	3.59950	HepG2	PRPF6
CYB5R4	ENSG00000065615.9	429.01660	264.11760	0.69980	3.61660	2.23480	HepG2	PRPF6
KDM4A	ENSG00000066135.8	955.93550	654.36390	0.54670	3.05340	1.78170	HepG2	PRPF6
NGEF	ENSG00000066248.10	415.94590	624.38210	-0.58600	3.07910	1.80390	HepG2	PRPF6
LRRC40	ENSG00000066557.5	1042.22370	660.72050	0.65750	2.45250	1.30200	HepG2	PRPF6
KLF6	ENSG00000067082.10	1433.73240	2353.29950	-0.71490	5.55430	3.87190	HepG2	PRPF6
PPAP2A	ENSG00000067113.12	208.41290	118.64340	0.81270	3.03870	1.76980	HepG2	PRPF6
TNFRSF1A	ENSG00000067182.3	761.81070	1152.70330	-0.59750	3.63940	2.25360	HepG2	PRPF6
DHX29	ENSG00000067248.5	687.74970	446.29670	0.62380	3.49780	2.13940	HepG2	PRPF6
IARS2	ENSG00000067704.8	3086.89460	4304.77010	-0.47980	2.96010	1.70480	HepG2	PRPF6
ACSL4	ENSG00000068366.15	9606.10760	16453.39670	-0.77640	3.50980	2.14790	HepG2	PRPF6
INPP5A	ENSG00000068383.14	782.58140	547.27090	0.51590	2.67020	1.47020	HepG2	PRPF6
ATP11A	ENSG00000068650.14	2210.59760	3230.11880	-0.54720	3.59320	2.21620	HepG2	PRPF6
CYFIP1	ENSG00000068793.13	1137.95670	1564.76640	-0.45950	2.48470	1.32570	HepG2	PRPF6
TGFBR3	ENSG00000069702.6	4343.76050	9129.69990	-1.07160	12.56160	10.25050	HepG2	PRPF6
FSTL3	ENSG00000070404.5	419.49290	644.78490	-0.62020	3.41730	2.07260	HepG2	PRPF6
JMJD6	ENSG00000070495.10	346.00460	744.04710	-1.10460	9.46510	7.36060	HepG2	PRPF6
WIPI1	ENSG00000070540.8	554.14380	790.92480	-0.51330	2.66400	1.46470	HepG2	PRPF6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

79 RBPs can affect the gene expression of PRPF6 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PRPF6	ENSG00000101161.6	2268.34190	2917.11630	-0.36290	3.48590	2.29190	HepG2	AATF
PRPF6	ENSG00000101161.6	3493.22720	3965.87230	-0.18310	2.53350	1.94700	HepG2	ACO1
PRPF6	ENSG00000101161.6	3252.56600	2568.76080	0.34040	2.88910	1.87120	HepG2	ADAR
PRPF6	ENSG00000101161.6	5260.54700	5901.39490	-0.16580	2.18400	1.56100	HepG2	AUH
PRPF6	ENSG00000101161.6	1949.29990	4065.91130	-1.06060	25.72210	24.20350	HepG2	BOP1
PRPF6	ENSG00000101161.6	2706.97940	3176.34850	-0.23070	2.07120	1.39720	HepG2	CALR
PRPF6	ENSG00000101161.6	3596.35530	5737.76600	-0.67400	6.70690	5.17290	HepG2	CCAR1
PRPF6	ENSG00000101161.6	4885.51440	3964.76620	0.30120	7.12230	6.14640	HepG2	CKAP4
PRPF6	ENSG00000101161.6	2399.21070	3732.67860	-0.63770	9.36420	8.17260	HepG2	CPSF6
PRPF6	ENSG00000101161.6	2171.47070	2987.83920	-0.46040	2.95830	1.53800	HepG2	CSTF2T
PRPF6	ENSG00000101161.6	4278.82440	5127.51980	-0.26100	3.85950	3.00740	HepG2	DAZAP1
PRPF6	ENSG00000101161.6	4251.86920	3667.75150	0.21310	3.41560	2.50080	HepG2	DDX19B
PRPF6	ENSG00000101161.6	2343.37680	3149.14520	-0.42640	4.32370	3.17180	HepG2	DDX24
PRPF6	ENSG00000101161.6	1886.78340	2575.29850	-0.44880	4.47830	2.73410	HepG2	DDX28
PRPF6	ENSG00000101161.6	3069.84390	4035.17720	-0.39450	2.92040	2.28760	HepG2	DDX6
PRPF6	ENSG00000101161.6	3361.77630	3794.20200	-0.17460	2.04870	1.45220	HepG2	DKC1
PRPF6	ENSG00000101161.6	2209.41370	2963.18720	-0.42350	2.88120	1.75010	HepG2	AGO1
PRPF6	ENSG00000101161.6	2162.09000	2633.81060	-0.28470	2.13130	1.32920	HepG2	EIF3D
PRPF6	ENSG00000101161.6	5350.18990	4325.15750	0.30670	2.31920	1.68340	HepG2	FXR1
PRPF6	ENSG00000101161.6	3982.29060	4712.66520	-0.24290	3.23240	2.23340	HepG2	HNRNPA2B1
PRPF6	ENSG00000101161.6	5647.82700	4063.62110	0.47480	5.81330	4.82940	HepG2	HNRNPK
PRPF6	ENSG00000101161.6	2918.92910	4037.87330	-0.46820	5.02230	4.20030	HepG2	HNRNPLL
PRPF6	ENSG00000101161.6	2558.37030	2885.47560	-0.17360	1.92430	1.40970	HepG2	HNRNPU
PRPF6	ENSG00000101161.6	3481.84080	4154.66310	-0.25490	2.63650	1.92910	HepG2	IGF2BP1
PRPF6	ENSG00000101161.6	3273.13450	4077.41110	-0.31700	2.40730	1.77270	HepG2	IGF2BP2
PRPF6	ENSG00000101161.6	3283.70870	2947.41180	0.15580	2.15510	1.49910	HepG2	ILF2
PRPF6	ENSG00000101161.6	3574.62870	4326.67320	-0.27550	1.90960	1.35930	HepG2	MAGOH
PRPF6	ENSG00000101161.6	2947.59970	3752.07180	-0.34810	3.93350	2.97380	HepG2	MSI2
PRPF6	ENSG00000101161.6	3000.25300	4118.40220	-0.45700	2.89480	1.90120	HepG2	MTPAP
PRPF6	ENSG00000101161.6	3051.61150	3964.90840	-0.37770	3.10770	2.34410	HepG2	PABPC4
PRPF6	ENSG00000101161.6	1713.22810	3269.46290	-0.93230	8.24240	6.24910	HepG2	PRPF6
PRPF6	ENSG00000101161.6	3663.42810	4853.76400	-0.40590	4.86520	4.10180	HepG2	PUF60
PRPF6	ENSG00000101161.6	4907.26560	4039.46250	0.28070	5.54840	4.73150	HepG2	PUS1
PRPF6	ENSG00000101161.6	3885.93770	4672.98480	-0.26610	3.18740	2.52420	HepG2	QKI
PRPF6	ENSG00000101161.6	4005.75050	5663.34800	-0.49960	11.54210	10.63680	HepG2	RBM22
PRPF6	ENSG00000101161.6	3324.15440	4241.12600	-0.35150	4.07780	3.27340	HepG2	RBM25
PRPF6	ENSG00000101161.6	4019.09090	3039.39100	0.40300	3.11570	1.98930	HepG2	RCC2
PRPF6	ENSG00000101161.6	3340.91470	4545.26410	-0.44410	5.57780	4.65790	HepG2	RPLP0
PRPF6	ENSG00000101161.6	2952.01870	2569.62290	0.20000	2.77210	2.12710	HepG2	SAFB2
PRPF6	ENSG00000101161.6	6819.24800	4701.51900	0.53640	4.23550	3.39150	HepG2	SF3A3
PRPF6	ENSG00000101161.6	3312.24750	3996.61860	-0.27100	2.29060	1.64610	HepG2	SF3B1
PRPF6	ENSG00000101161.6	3984.17630	4492.24470	-0.17320	2.02020	1.50270	HepG2	SF3B4
PRPF6	ENSG00000101161.6	3542.81170	2996.57960	0.24150	4.65860	3.86020	HepG2	SMN1
PRPF6	ENSG00000101161.6	3288.68550	4446.96710	-0.43530	2.57740	1.82430	HepG2	SNRNP70
PRPF6	ENSG00000101161.6	4222.73410	4689.01450	-0.15110	1.72010	1.32240	HepG2	SRSF1
PRPF6	ENSG00000101161.6	3537.95770	4145.23590	-0.22850	3.34090	2.58610	HepG2	SRSF7
PRPF6	ENSG00000101161.6	3077.27310	3814.83500	-0.31000	5.75020	5.00580	HepG2	SRSF9
PRPF6	ENSG00000101161.6	4609.28620	5553.39490	-0.26880	5.17590	4.51760	HepG2	SSB
PRPF6	ENSG00000101161.6	1946.10190	2804.41760	-0.52710	3.41400	2.06970	HepG2	SUB1
PRPF6	ENSG00000101161.6	2335.70200	3384.78460	-0.53520	6.02910	5.08890	HepG2	SUPV3L1
PRPF6	ENSG00000101161.6	2517.93070	4214.90080	-0.74330	21.41650	20.06340	HepG2	TAF15
PRPF6	ENSG00000101161.6	2704.22470	3936.03570	-0.54150	7.19550	6.10240	HepG2	TARDBP
PRPF6	ENSG00000101161.6	2976.19100	3872.67370	-0.37990	4.92500	3.82020	HepG2	TIA1
PRPF6	ENSG00000101161.6	3350.06050	4169.53870	-0.31570	5.67630	4.73260	HepG2	UPF1
PRPF6	ENSG00000101161.6	2819.28480	4025.51020	-0.51380	11.42000	10.33590	HepG2	UTP3
PRPF6	ENSG00000101161.6	4469.03770	3452.98960	0.37200	8.08090	7.18170	K562	AGGF1
PRPF6	ENSG00000101161.6	4502.76230	3794.46630	0.24680	2.20640	1.33930	K562	AKAP8
PRPF6	ENSG00000101161.6	4542.11450	3593.02980	0.33810	3.65750	2.90290	K562	AKAP8L
PRPF6	ENSG00000101161.6	4409.47650	3770.02410	0.22590	2.78820	1.87100	K562	ATP5C1
PRPF6	ENSG00000101161.6	2363.85460	2000.14140	0.24090	2.87040	1.52450	K562	DDX27
PRPF6	ENSG00000101161.6	5392.60960	3865.50260	0.48020	7.02050	6.04900	K562	DDX47
PRPF6	ENSG00000101161.6	4159.93700	2133.51600	0.96320	19.05130	16.39350	K562	EFTUD2
PRPF6	ENSG00000101161.6	2989.34760	2283.83430	0.38830	2.65640	1.64310	K562	EIF3D
PRPF6	ENSG00000101161.6	1868.93970	1415.93380	0.40040	5.35110	4.25950	K562	EIF3G
PRPF6	ENSG00000101161.6	1519.49780	1937.54380	-0.35060	2.52900	1.45900	K562	FKBP4
PRPF6	ENSG00000101161.6	819.59900	1468.58270	-0.84140	4.77700	3.78900	K562	G3BP2
PRPF6	ENSG00000101161.6	2685.48700	2046.92610	0.39160	2.42780	1.48520	K562	IGF2BP2
PRPF6	ENSG00000101161.6	2695.11580	2081.53730	0.37260	3.69200	2.27510	K562	IGF2BP3
PRPF6	ENSG00000101161.6	4640.55970	3812.97100	0.28330	3.10190	2.22440	K562	KIF1C
PRPF6	ENSG00000101161.6	2605.81590	2150.09170	0.27720	2.37380	1.59270	K562	MAGOH
PRPF6	ENSG00000101161.6	4322.16370	3650.05820	0.24370	2.24410	1.30890	K562	MAK16
PRPF6	ENSG00000101161.6	5203.94200	4271.50890	0.28480	3.11520	2.14020	K562	MBNL1
PRPF6	ENSG00000101161.6	4081.86060	3522.76880	0.21240	4.38670	3.47090	K562	NSUN2
PRPF6	ENSG00000101161.6	2702.32110	2102.24970	0.36220	3.68400	2.11960	K562	PCBP1
PRPF6	ENSG00000101161.6	2629.22530	1912.83970	0.45880	5.49070	4.10350	K562	PCBP2
PRPF6	ENSG00000101161.6	849.11030	2475.15690	-1.54350	16.04090	12.67400	K562	PRPF6
PRPF6	ENSG00000101161.6	3387.54550	2076.16980	0.70620	10.33730	8.88300	K562	PRPF8
PRPF6	ENSG00000101161.6	4857.86510	5699.63760	-0.23050	2.66910	1.62370	K562	PUM1
PRPF6	ENSG00000101161.6	5046.69240	3563.03130	0.50210	6.70100	5.89830	K562	PUS1
PRPF6	ENSG00000101161.6	4682.31160	3471.85960	0.43140	7.97550	7.00020	K562	RBM15
PRPF6	ENSG00000101161.6	3594.63960	2114.43900	0.76550	9.68970	8.14550	K562	RPS19
PRPF6	ENSG00000101161.6	4159.02130	3476.15160	0.25870	3.60390	2.68110	K562	SF3A3
PRPF6	ENSG00000101161.6	2253.99750	1525.86170	0.56280	6.22280	4.90270	K562	SF3B4
PRPF6	ENSG00000101161.6	2783.36690	2048.07900	0.44250	5.82060	4.80350	K562	SRSF1
PRPF6	ENSG00000101161.6	2663.42540	1934.57510	0.46120	4.06860	2.75280	K562	SRSF5
PRPF6	ENSG00000101161.6	3076.80550	2072.51210	0.57000	4.98170	4.01820	K562	TARDBP
PRPF6	ENSG00000101161.6	2873.81770	1999.24480	0.52340	3.71770	2.75050	K562	TIA1
PRPF6	ENSG00000101161.6	2741.97640	1962.51070	0.48240	3.74600	2.44630	K562	TRA2A
PRPF6	ENSG00000101161.6	4183.67570	3735.27060	0.16350	2.10680	1.47300	K562	UPF1
PRPF6	ENSG00000101161.6	3787.19580	3323.66780	0.18830	2.71630	1.87720	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PRPF6 is not available on ENCORE database.

9 RBPs can affect the splicing of PRPF6 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PRPF6	ENSG00000101161.6	chr20	+	62654109	62654231			62648075	62648198	62658334	62658511	-0.15400	0.00285	0.04844	excluded	HepG2	U2AF1
SE	PRPF6	ENSG00000101161.6	chr20	+	62659830	62659988			62658908	62659089	62660729	62660844	-0.05400	0.01153	0.09093	excluded	K562	AQR
SE	PRPF6	ENSG00000101161.6	chr20	+	62657291	62657411			62655811	62656046	62658334	62658511	-0.08300	0.00002	0.00035	excluded	K562	AQR
SE	PRPF6	ENSG00000101161.6	chr20	+	62657291	62657411			62655907	62656046	62658334	62658511	-0.06300	0.00001	0.01107	excluded	K562	PPIL4
SE	PRPF6	ENSG00000101161.6	chr20	+	62612929	62613087			62612487	62612669	62614399	62614568	-0.07000	0.00022	0.02159	excluded	HepG2	TIAL1
SE	PRPF6	ENSG00000101161.6	chr20	+	62612929	62613087			62612487	62612669	62614399	62614568	-0.07000	0.00030	0.01513	excluded	HepG2	HNRNPC
SE	PRPF6	ENSG00000101161.6	chr20	+	62657291	62657411			62655907	62656046	62658334	62658511	-0.15400	0.00000	0.00003	excluded	K562	HNRNPC
A3SS	PRPF6	ENSG00000101161.6	chr20	+	62614399	62614568			62614482	62614568	62612487	62612669	-0.07500	0.00141	0.00946	shorter	K562	AQR
MXE	PRPF6	ENSG00000101161.6	chr20	+	62655811	62656046	62657291	62657411	62654109	62654231	62658334	62658511	0.09500	0.00001	0.00013	1included	K562	AQR
MXE	PRPF6	ENSG00000101161.6	chr20	+	62642637	62642856	62648075	62648198	62641552	62641671	62654109	62654231	0.28200	0.00000	0.00000	1included	HepG2	XRN2
MXE	PRPF6	ENSG00000101161.6	chr20	+	62642637	62642856	62648075	62648198	62641552	62641671	62654109	62654231	0.27400	0.00000	0.00000	1included	HepG2	DDX55
MXE	PRPF6	ENSG00000101161.6	chr20	+	62655907	62656046	62657291	62657411	62654109	62654231	62658334	62658511	-0.11400	0.00048	0.08278	2included	K562	PUM2
MXE	PRPF6	ENSG00000101161.6	chr20	+	62642637	62642856	62648075	62648198	62641552	62641671	62654109	62654231	0.07200	0.00265	0.05686	1included	K562	PPIL4
MXE	PRPF6	ENSG00000101161.6	chr20	+	62655907	62656046	62657291	62657411	62654109	62654231	62658334	62658511	-0.12300	0.00195	0.05367	2included	K562	DHX30

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PRPF6

General Information

Functions

Localization(RBPImage: PRPF6)

Domains (AlphaFold: PRPF6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PRPF6 is not avaliable on ENCORE database.

49 proteins are bound to PRPF6 RNA:

eCLIP assay for PRPF6 is not avaliable on ENCORE database.

Diffrential Expression

1,863 differentially expressed genes after Knockdown/Knockout PRPF6 protein :

79 RBPs can affect the gene expression of PRPF6 :

The Knockdown/knockout RNA-Seq assay for PRPF6 is not available on ENCORE database.

9 RBPs can affect the splicing of PRPF6 :

The Knockdown/knockout RNA-Seq assay for PRPF6 is not avaliable on ENCORE database.