PIK3CB

General Information

Gene Name : PIK3CB
Gene ID : ENSG00000051382.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PIK3CB)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PIK3CB	ENSG00000051382.8	14.08	11.80	12.94	ENCSR000AEF
HepG2	PIK3CB	ENSG00000051382.8	10.42	17.55	13.98	ENCSR985KAT
K562	PIK3CB	ENSG00000051382.8	43.17	39.52	41.34	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PIK3CB is not avaliable on ENCORE database.

Proteins bound to RNA

PIK3CB RNA is bound by 48 proteins.

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eCLIP assay for PIK3CB is not avaliable on ENCORE database.

48 proteins are bound to PIK3CB RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	138373829	138373929	-	3'-UTR,intron-Distal,intron-Proximal	4.30659	54.57380	K562	PUM2
chr3	138553629	138553652	-	5'-UTR,intron-Distal,intron-Proximal	5.92697	47.33145	HepG2	PRPF4
chr3	138553536	138553666	-	5'-UTR,intron-Distal,intron-Proximal	3.80516	34.49658	K562	DDX24
chr3	138553560	138553629	-	5'-UTR,intron-Distal,intron-Proximal	5.24336	34.21917	HepG2	PRPF4
chr3	138486797	138486863	-	intron-Distal	5.94861	26.91448	K562	LSM11
chr3	138553652	138553710	-	5'-UTR,intron-Distal,intron-Proximal	4.12268	26.01758	HepG2	PRPF4
chr3	138433309	138433413	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.04664	25.98130	HepG2	BCLAF1
chr3	138553558	138553692	-	5'-UTR,intron-Distal,intron-Proximal	3.71241	22.43733	K562	GTF2F1
chr3	138453476	138453541	-	3'-UTR,CDS,intron-Distal	3.90932	19.59414	HepG2	BCLAF1
chr3	138461551	138461610	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.62728	19.54768	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 181 entries

eCLIP assay for PIK3CB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PIK3CB is not available on ENCORE database.
144 RBPs can affect the levels of PIK3CB.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PIK3CB is not available on ENCORE database.

144 RBPs can affect the gene expression of PIK3CB :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PIK3CB	ENSG00000051382.4	532.12720	2262.92650	-2.08830	52.51960	50.10500	HepG2	MATR3
PIK3CB	ENSG00000051382.4	2578.04610	1378.24440	0.90330	41.90700	40.43510	HepG2	ZNF622
PIK3CB	ENSG00000051382.4	1069.22100	2318.91040	-1.11690	41.75560	40.21410	HepG2	NELFE
PIK3CB	ENSG00000051382.4	1176.23140	2264.33220	-0.94490	33.61430	32.36510	HepG2	SRSF1
PIK3CB	ENSG00000051382.4	824.84450	2316.20130	-1.48960	31.50300	29.55360	HepG2	NCBP2
PIK3CB	ENSG00000051382.4	1168.91000	2159.77710	-0.88570	27.87120	26.27600	HepG2	RECQL
PIK3CB	ENSG00000051382.4	1109.82050	2047.74060	-0.88370	27.61580	26.03430	HepG2	PCBP1
PIK3CB	ENSG00000051382.4	706.15590	1311.08330	-0.89270	25.64580	24.08730	HepG2	CKAP4
PIK3CB	ENSG00000051382.4	3043.13550	1842.16620	0.72410	25.13590	23.78490	HepG2	SRSF9
PIK3CB	ENSG00000051382.4	382.01070	959.63260	-1.32890	24.05950	22.48090	HepG2	HNRNPA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 173 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PIK3CB is not available on ENCORE database.

17 RBPs can affect the splicing of PIK3CB :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PIK3CB	ENSG00000051382.4	chr3	-	138515304	138515409			138478014	138478201	138553536	138553675	-0.24500	0.00000	0.00001	excluded	K562	AKAP8L
SE	PIK3CB	ENSG00000051382.4	chr3	-	138515304	138515409			138478014	138478201	138553536	138553675	-0.27900	0.00000	0.00001	excluded	K562	PUS1
SE	PIK3CB	ENSG00000051382.4	chr3	-	138515304	138515409			138478014	138478201	138553536	138553675	-0.31400	0.00000	0.00000	excluded	K562	RBM15
SE	PIK3CB	ENSG00000051382.4	chr3	-	138515304	138515409			138478014	138478201	138553536	138553675	-0.30500	0.00000	0.00000	excluded	K562	AGGF1
A3SS	PIK3CB	ENSG00000051382.4	chr3	-	138400808	138401007			138400808	138400887	138402519	138402629	0.08300	0.00000	0.00000	longer	K562	AQR
SE	PIK3CB	ENSG00000051382.4	chr3	-	138407716	138407816			138403466	138403645	138409841	138409985	-0.10000	0.00002	0.00059	excluded	HepG2	U2AF2
MXE	PIK3CB	ENSG00000051382.4	chr3	-	138453475	138453646	138456548	138456728	138452202	138452280	138461399	138461623	-0.22400	0.00002	0.00089	2included	K562	DROSHA
SE	PIK3CB	ENSG00000051382.4	chr3	-	138515304	138515409			138478014	138478201	138553536	138553675	-0.25700	0.00003	0.00241	excluded	K562	UTP18
SE	PIK3CB	ENSG00000051382.4	chr3	-	138515304	138515409			138478014	138478201	138553536	138553675	-0.42400	0.00003	0.00110	excluded	K562	U2AF2
MXE	PIK3CB	ENSG00000051382.4	chr3	-	138413627	138413749	138417748	138417991	138409841	138409985	138423284	138423335	0.09900	0.00006	0.00074	1included	K562	AQR

Showing 1 to 10 of 37 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PIK3CB

General Information

Functions

Localization

Domains (AlphaFold: PIK3CB)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PIK3CB is not avaliable on ENCORE database.

48 proteins are bound to PIK3CB RNA:

eCLIP assay for PIK3CB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PIK3CB is not available on ENCORE database.

144 RBPs can affect the gene expression of PIK3CB :

The Knockdown/knockout RNA-Seq assay for PIK3CB is not available on ENCORE database.

17 RBPs can affect the splicing of PIK3CB :

The Knockdown/knockout RNA-Seq assay for PIK3CB is not avaliable on ENCORE database.