RPS3A

General Information

Gene Name       : RPS3A
Gene ID             : ENSG00000145425.9
Essential Gene : Yes

Functions

Localization(RBPImage: RPS3A)

Domains (AlphaFold: RPS3A)


Antibody Validation

 View validation images for all RPS3A antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RPS3AENSG00000145425.92934.862498.172716.52ENCSR000AEF
HepG2RPS3AENSG00000145425.91705.652519.392112.52ENCSR985KAT
K562RPS3AENSG00000145425.91934.711853.511894.11ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq RPS3A-BGKLV24-K562ENCSR788YGGRPS3AK562ReleasedENCSR419JMU   shRNAKD% = 61.2,65.1
knockdown followed by RNA-seq RPS3A-BGHLV22-HepG2ENCSR118VQRRPS3AHepG2ReleasedENCSR279HMU   shRNAKD% = 52.8,49.3






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
RPS3AENCAB550TJZGTX10502039953BGHLV22-43, Released, ENCODE3BGKLV24-49, Released, ENCODE3
RPS3AENCAB796EDVA305-001A1Released, ENCODE4BGHLV22-43, Released, ENCODE3
RPS3AENCAB197PDFA305-003A1Released, ENCODE4BGHLV22-43, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RPS3AK562shRNAENCSR788YGGENCSR419JMURPS3A_BGKLV24_49B,RPS3A_BGKLV24_50Bnon-target_BGKLV24_1B,non-target_BGKLV24_2B61.2,65.1ReleasedENCODE3
RPS3AHepG2shRNAENCSR118VQRENCSR279HMURPS3A-BGHLV22-43,RPS3A-BGHLV22-44non-target-BGHLV22-1_17746,non-target-BGHLV22-2_1774752.8,49.3ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    RPS3A: Click to RBP Image Database
  • Cytoplasm
  • Compartment/Organelle
  • Mitochondria












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    RPS3AProduct_ID: A305-001A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: RPS3A-human    		 Bethyl_A305-001A_1_RPS3A.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RPS3A specific antibody, A305-001A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the RPS3A-specific antibody, A305-001A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    RPS3AProduct_ID: A305-003A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: RPS3A-human    		 Bethyl_A305-003A_1_RPS3A.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RPS3A specific antibody, A305-003A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the RPS3A-specific antibody, A305-003A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    RPS3AProduct_ID: GTX105020
    Lot_ID: 39953
    Source: GeneTex
    Target Name: RPS3A-human    		 RPS3A_Secondary_Western.png<br>Caption: Western blot following shRNA against RPS3A in K562 and HepG2 whole cell lysate using RPS3A specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against RPS3A. Lanes 5-8 follow the same pattern, but in HepG2. RPS3A protein appears as the green band, Tubulin serves as a control and appears in red.
    		 RPS3A_Secondary_Western.png<br>Caption: Western blot following shRNA against RPS3A in K562 and HepG2 whole cell lysate using RPS3A specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against RPS3A. Lanes 5-8 follow the same pattern, but in HepG2. RPS3A protein appears as the green band, Tubulin serves as a control and appears in red.








    RNA Targets

    • eCLIP assay for RPS3A is not avaliable on ENCORE database.



    Proteins bound to RNA
    • RPS3A RNA is bound by 26 proteins.  







    eCLIP assay for RPS3A is not avaliable on ENCORE database.





    26 proteins are bound to RPS3A RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr4152024172152024184+3'-UTR,CDS3.4816018.42490K562TROVE2
    chr4152024997152025026+3'-UTR,intron-Distal4.19138400.00000HepG2NOLC1
    chr4152024248152024329+3'-UTR,intron-Distal,intron-Proximal3.510984.83391K562GRWD1
    chr4152024238152024303+3'-UTR,intron-Distal,intron-Proximal3.876817.58497HepG2GRWD1
    chr4152024146152024172+3'-UTR,CDS4.0200143.17048K562TROVE2
    chr4152025291152025358+3'-UTR,CDS,intron-Proximal3.082657.01463HepG2BUD13
    chr4152025412152025480+3'-UTR,CDS,intron-Proximal5.483026.23016HepG2PRPF8
    chr4152024240152024310+3'-UTR,intron-Distal,intron-Proximal4.682555.45972HepG2TIAL1
    chr4152024128152024146+3'-UTR,CDS4.0684942.06014K562TROVE2
    chr4152021569152021660+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.659955.68078HepG2AQR
    chr4152024210152024213+3'-UTR,CDS,intron-Proximal3.375819.81338K562YBX3
    chr4152021636152021653+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.2308428.08663K562PABPC4
    chr4152024022152024048+3'-UTR,CDS,intron-Proximal3.601765.23690K562IGF2BP2
    chr4152024206152024274+3'-UTR,CDS,intron-Proximal5.225827.13970HepG2PRPF8
    chr4152024234152024279+3'-UTR,intron-Proximal3.395794.83230K562AQR
    chr4152024414152024469+3'-UTR,intron-Distal4.586704.38124HepG2ILF3
    chr4152025270152025347+3'-UTR,CDS,intron-Proximal5.003986.23935HepG2AQR
    chr4152024022152024051+3'-UTR,CDS,intron-Proximal3.212336.04560K562IGF2BP1
    chr4152025328152025339+3'-UTR,CDS,intron-Proximal3.5575310.97396K562YBX3
    chr4152024189152024283+3'-UTR,CDS,intron-Proximal3.898543.72608K562SRSF7
    chr4152024233152024282+3'-UTR,intron-Proximal4.111228.46423K562PRPF8
    chr4152024472152024555+3'-UTR,intron-Distal3.447154.00440HepG2ILF3
    chr4152025427152025480+3'-UTR,CDS,intron-Proximal4.735956.23935HepG2AQR
    chr4152024245152024320+3'-UTR,intron-Distal,intron-Proximal3.849796.87998K562TIA1
    chr4152024223152024231+3'-UTR,CDS,intron-Proximal3.101874.34702K562LIN28B
    chr4152024119152024186+3'-UTR,CDS3.074035.32556K562IGF2BP2
    chr4152024212152024223+3'-UTR,CDS,intron-Proximal3.401375.83472K562LIN28B
    chr4152020777152020863+5'-UTR,CDS,intron-Proximal3.5945620.08039K562GEMIN5
    chr4152020794152020833+5'-UTR,CDS,intron-Proximal3.387513.41711K562DROSHA
    chr4152020961152021078+5'-UTR,intron-Distal,intron-Proximal4.0007011.14658K562RBFOX2
    chr4152021080152021116+5'-UTR,intron-Distal,intron-Proximal3.033566.35387K562HNRNPM
    chr4152020898152020935+5'-UTR,intron-Proximal3.140826.06713K562TIA1
    chr4152020892152020941+5'-UTR,intron-Proximal5.066749.60492HepG2RBM22
    chr4152020865152020887+5'-UTR,CDS,intron-Proximal3.306697.36655K562AQR
    chr4152020896152020923+5'-UTR,intron-Proximal4.581678.47832HepG2BUD13
    chr4152020866152020927+5'-UTR,intron-Proximal4.993247.56728HepG2AQR
    chr4152020857152020866+5'-UTR,CDS,intron-Proximal3.2884730.04340K562PABPC4
    chr4152020791152020815+5'-UTR,CDS,intron-Proximal3.7714256.83410K562YBX3
    chr4152020894152020949+5'-UTR,intron-Proximal4.4261210.27288K562RBM22
    chr4152020767152020841+5'-UTR,CDS,intron-Proximal3.1065642.53945K562DDX3X
    chr4152020875152020926+5'-UTR,intron-Proximal4.3470712.79935HepG2PRPF8
    chr4152020906152021022+5'-UTR,intron-Distal,intron-Proximal3.288135.58948HepG2HNRNPM
    chr4152020960152021019+5'-UTR,intron-Distal,intron-Proximal3.315368.62714K562HNRNPM
    chr4152020815152020828+5'-UTR,CDS,intron-Proximal3.4780457.91144K562YBX3
    chr4152021107152021161+5'-UTR,CDS,intron-Distal,intron-Proximal4.030803.40087HepG2RBFOX2
    chr4152020887152020921+5'-UTR,intron-Proximal6.3827916.98862K562AQR
    chr4152020899152020959+5'-UTR,intron-Proximal3.284048.11130K562HNRNPM
    chr4152020887152021004+5'-UTR,intron-Distal,intron-Proximal4.2234616.61103K562PRPF8
    chr4152020837152020841+5'-UTR,CDS,intron-Proximal3.1646941.13643K562YBX3
    chr4152020778152020791+5'-UTR3.2558417.56078K562YBX3
    chr4152020935152020959+5'-UTR,intron-Proximal3.403383.54602K562TIA1
    chr4152021100152021165+5'-UTR,CDS,intron-Distal,intron-Proximal3.388375.84375K562RBFOX2
    chr4152020828152020837+5'-UTR,CDS,intron-Proximal3.4809365.03079K562YBX3
    chr4152020892152020947+5'-UTR,intron-Proximal4.363885.98353HepG2EFTUD2
    chr4152022306152022356+CDS,intron-Distal,intron-Proximal4.110565.93840HepG2PRPF8
    chr4152022277152022314+CDS,intron-Distal,intron-Proximal3.229776.20434K562IGF2BP1
    chr4152022287152022314+CDS,intron-Distal,intron-Proximal3.580545.23690K562IGF2BP2
    chr4152021698152021726+CDS,intron-Distal3.080963.11834K562METAP2
    chr4152021770152021882+intron-Distal,intron-Proximal3.3517510.48251K562KHSRP
    chr4152021473152021531+intron-Distal,intron-Proximal3.444555.43415K562RBFOX2
    chr4152021782152021883+intron-Distal,intron-Proximal4.038986.66403K562TIA1
    chr4152021770152021900+intron-Distal,intron-Proximal4.6616023.50353K562PRPF8
    chr4152021361152021473+intron-Distal3.294119.54345K562RBFOX2
    chr4152021120152021143+intron-Distal,intron-Proximal4.7177513.12084K562HNRNPM
    chr4152021361152021452+intron-Distal3.795727.04748HepG2RBFOX2
    chr4152021781152021873+intron-Distal,intron-Proximal3.6357710.15139K562EFTUD2
    chr4152021380152021448+intron-Distal3.210143.56007K562DDX6
    chr4152022314152022374+intron-Distal,intron-Proximal5.0567511.65116K562AQR
    chr4152021143152021179+intron-Distal,intron-Proximal5.5683212.60442K562HNRNPM
    chr4152025276152025306+intron-Proximal3.291596.94390K562SF3B4
    chr4152025483152025507+intron-Proximal4.530167.15298K562AQR
    chr4152025441152025472+intron-Proximal7.2525830.67861K562AQR
    chr4152025472152025483+intron-Proximal6.2135829.33968K562AQR
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for RPS3A is not avaliable on ENCORE database.



    Diffrential Expression
    • 5,617 differentially expressed genes after Knockdown/Knockout RPS3A protein.  





    • 137 RBPs can affect the levels of RPS3A.  







    5,617 differentially expressed genes after Knockdown/Knockout RPS3A protein :

    Only display 100 entries as example. Please click "View All" button to see all 5,617 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    GCLCENSG00000001084.61139.266201759.11030-0.626704.910703.84200HepG2RPS3A
    ANKIB1ENSG00000001629.51235.523901778.33740-0.525403.642802.72590HepG2RPS3A
    CYP51A1ENSG00000001630.116405.445103155.462001.0213013.4518011.74370HepG2RPS3A
    RAD52ENSG00000002016.12266.94360387.59930-0.538002.485001.72520HepG2RPS3A
    BADENSG00000002330.9129.6533039.779501.704507.811306.48590HepG2RPS3A
    LAP3ENSG00000002549.81517.250602752.11110-0.859109.155007.73050HepG2RPS3A
    MAD1L1ENSG00000002822.11232.19800158.156100.553902.030601.34540HepG2RPS3A
    KLHL13ENSG00000003096.933.8865010.501101.690102.619901.84200HepG2RPS3A
    CASP10ENSG00000003400.10723.189701127.67440-0.640904.682003.64300HepG2RPS3A
    SLC7A2ENSG00000003989.125496.5096011844.63090-1.1076016.1037014.24160HepG2RPS3A
    ARF5ENSG00000004059.6782.57220586.641200.415602.093101.39650HepG2RPS3A
    PLXND1ENSG00000004399.81828.774203388.45190-0.889702.326301.59080HepG2RPS3A
    AK2ENSG00000004455.121705.858302201.82770-0.368202.080601.38610HepG2RPS3A
    UPF1ENSG00000005007.82023.962701356.263200.577403.582802.67150HepG2RPS3A
    SLC25A5ENSG00000005022.53734.116605222.63730-0.484003.519202.61570HepG2RPS3A
    LIG3ENSG00000005156.7434.29740631.69170-0.540503.017102.18270HepG2RPS3A
    ACSM3ENSG00000005187.72212.860301220.256300.858608.816107.41640HepG2RPS3A
    SPPL2BENSG00000005206.12505.06300234.091001.109308.162506.81020HepG2RPS3A
    CROTENSG00000005469.7510.96860226.388401.1743010.037008.55430HepG2RPS3A
    RHBDD2ENSG00000005486.12689.36320479.149500.524702.064401.37340HepG2RPS3A
    ITGALENSG00000005844.13163.9629029.253602.4866015.6687013.82230HepG2RPS3A
    PDK2ENSG00000005882.7409.31700231.936200.819405.014103.93740HepG2RPS3A
    ZFXENSG00000005889.111557.54670873.914300.833607.864106.53400HepG2RPS3A
    LAMP2ENSG00000005893.113832.876105911.45340-0.625105.530504.39330HepG2RPS3A
    ASB4ENSG00000005981.845.3426099.28150-1.130703.626202.71070HepG2RPS3A
    GDE1ENSG00000006007.71756.648202693.03440-0.616405.061503.98070HepG2RPS3A
    C19orf60ENSG00000006015.1363.5595018.001301.819904.829803.77280HepG2RPS3A
    AP2B1ENSG00000006125.123141.795904311.74170-0.456703.158102.30430HepG2RPS3A
    CX3CL1ENSG00000006210.63497.545901652.415201.0817014.2261012.46800HepG2RPS3A
    SPATA20ENSG00000006282.151074.47800670.703600.679805.130304.04240HepG2RPS3A
    TNFRSF12AENSG00000006327.9582.135001018.41620-0.806902.295701.56560HepG2RPS3A
    MAP3K9ENSG00000006432.11394.47520913.55780-1.2116013.3487011.64800HepG2RPS3A
    BAIAP2L1ENSG00000006453.9815.162201405.95750-0.786407.003205.74220HepG2RPS3A
    JHDM1DENSG00000006459.61189.787003892.86280-1.7101033.1441030.49730HepG2RPS3A
    GGCTENSG00000006625.13238.53450351.48110-0.559202.551001.78220HepG2RPS3A
    DBF4ENSG00000006634.3169.88940340.50120-1.003106.499605.27780HepG2RPS3A
    IFRD1ENSG00000006652.91210.043501600.09950-0.403102.309201.57630HepG2RPS3A
    ADIPOR2ENSG00000006831.92666.650303501.23850-0.392802.418801.66820HepG2RPS3A
    MARK4ENSG00000007047.10635.087201099.21340-0.791403.926602.97480HepG2RPS3A
    CCDC124ENSG00000007080.6275.38880116.915501.235907.961306.62390HepG2RPS3A
    SCN4AENSG00000007314.720.334804.685002.117702.232201.51360HepG2RPS3A
    PAX6ENSG00000007372.1619.0591084.83430-2.154205.645504.50030HepG2RPS3A
    RPUSD1ENSG00000007376.3144.5055054.511601.406403.621602.70670HepG2RPS3A
    LUC7LENSG00000007392.121265.940001792.12850-0.501503.359302.47840HepG2RPS3A
    TSR3ENSG00000007520.3283.47620146.193900.955205.366904.24580HepG2RPS3A
    PIGQENSG00000007541.10243.6450071.431401.7701012.8869011.21870HepG2RPS3A
    CYB561ENSG00000008283.1143.224708.767402.301504.732303.68690HepG2RPS3A
    SPAG9ENSG00000008294.163101.024605661.33100-0.868408.733307.33950HepG2RPS3A
    CELSR3ENSG00000008300.10681.299301081.80240-0.667102.682901.89480HepG2RPS3A
    MPNDENSG00000008382.11177.95460112.882600.656602.295301.56550HepG2RPS3A
    MGST1ENSG00000008394.8647.00930856.15260-0.404102.049901.36120HepG2RPS3A
    CRY1ENSG00000008405.7352.10050732.14140-1.056109.852208.37820HepG2RPS3A
    PKD1ENSG00000008710.131182.59660556.842901.086505.120804.03430HepG2RPS3A
    MAPK8IP2ENSG00000008735.10102.0955026.289901.957207.867006.53660HepG2RPS3A
    RHOBTB2ENSG00000008853.12311.43620217.645800.516902.103301.40510HepG2RPS3A
    RPS20ENSG00000008988.54420.458506588.94340-0.575904.805103.75020HepG2RPS3A
    CSDE1ENSG00000009307.117280.8033011881.16630-0.706507.078005.80940HepG2RPS3A
    MASP2ENSG00000009724.12197.0241048.522102.0216013.5091011.80010HepG2RPS3A
    IYDENSG00000009765.1013.985200.577904.596903.171102.31590HepG2RPS3A
    VTA1ENSG00000009844.111317.71950963.788600.451202.661001.87650HepG2RPS3A
    MLXIPLENSG00000009950.114551.868301117.214702.0265045.4878042.45100HepG2RPS3A
    RANBP9ENSG00000010017.9938.959501339.20690-0.512203.326202.44950HepG2RPS3A
    ZNF207ENSG00000010244.122918.017003981.29580-0.448203.046202.20840HepG2RPS3A
    UQCRC1ENSG00000010256.62612.876904602.23570-0.816706.109104.92580HepG2RPS3A
    CD9ENSG00000010278.7402.52480637.86700-0.664204.248603.25660HepG2RPS3A
    NCAPD2ENSG00000010292.81295.586903125.98640-1.270705.161104.06790HepG2RPS3A
    IFFO1ENSG00000010295.15500.75430248.426801.011207.785906.46280HepG2RPS3A
    GIPRENSG00000010310.469.48080121.01020-0.800402.459401.70400HepG2RPS3A
    SEMA3GENSG00000010319.2551.61720850.86100-0.625302.242801.52260HepG2RPS3A
    IDSENSG00000010404.13773.236601039.46760-0.426902.341101.60240HepG2RPS3A
    HFEENSG00000010704.14139.4094079.852000.803802.655101.87110HepG2RPS3A
    SCMH1ENSG00000010803.121205.34960752.297500.680005.249004.14380HepG2RPS3A
    FYNENSG00000010810.13506.28640737.28050-0.542303.180602.32400HepG2RPS3A
    HIVEP2ENSG00000010818.41082.620202662.89350-1.2985019.1919017.17250HepG2RPS3A
    CLCN6ENSG00000011021.172021.803101344.924200.588004.391203.38270HepG2RPS3A
    AKAP8LENSG00000011243.131649.455301171.878800.493103.231202.36850HepG2RPS3A
    UTP18ENSG00000011260.9713.51710982.71880-0.461802.629701.84970HepG2RPS3A
    LARS2ENSG00000011376.5648.22370459.430900.496502.623001.84470HepG2RPS3A
    PLAURENSG00000011422.727.5448057.28960-1.056502.180401.46970HepG2RPS3A
    ANLNENSG00000011426.6274.967101288.93900-2.2289010.991009.44050HepG2RPS3A
    WIZENSG00000011451.13589.37240223.957301.3959014.3160012.55480HepG2RPS3A
    TMEM159ENSG00000011638.6138.11940334.48690-1.276009.583008.12390HepG2RPS3A
    BRCA1ENSG00000012048.1595.31900153.66930-0.689002.279801.55200HepG2RPS3A
    NR1H4ENSG00000012504.91862.54200666.360901.4828022.6538020.46210HepG2RPS3A
    MAN2B2ENSG00000013288.4465.24080300.304800.631503.457202.56240HepG2RPS3A
    PGM3ENSG00000013375.111789.713402296.56860-0.359802.016701.33410HepG2RPS3A
    POLR3BENSG00000013503.5240.62760138.788600.793803.506202.60450HepG2RPS3A
    ANGEL1ENSG00000013523.5636.36150408.857300.638103.944302.99000HepG2RPS3A
    DNASE1L1ENSG00000013563.9193.63460335.80800-0.794301.994601.31580HepG2RPS3A
    GPRC5AENSG00000013588.524.15780220.71290-3.191605.604904.46220HepG2RPS3A
    TACC3ENSG00000013810.14191.49720752.04190-1.973502.520901.75650HepG2RPS3A
    ZC3H3ENSG00000014164.6353.78620197.386800.841802.434901.68260HepG2RPS3A
    SLC30A9ENSG00000014824.91039.76110571.942000.862207.610206.30100HepG2RPS3A
    MTMR11ENSG00000014914.1596.19380199.76840-1.054305.213904.11340HepG2RPS3A
    BIDENSG00000015475.14263.99930179.368900.557502.199301.48570HepG2RPS3A
    MATR3ENSG00000015479.135351.397108512.41310-0.669706.361505.15290HepG2RPS3A
    NPC1L1ENSG00000015520.101220.21350461.036801.4041018.7207016.73940HepG2RPS3A
    CHDHENSG00000016391.65007.632202180.313501.1995017.7322015.80320HepG2RPS3A
    GLT8D1ENSG00000016864.121646.048701105.652400.574004.150803.17090HepG2RPS3A
    SRCIN1ENSG00000017373.11313.97450181.754700.788604.153703.17320HepG2RPS3A
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    137 RBPs can affect the gene expression of RPS3A :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    RPS3AENSG00000145425.514347.6146019948.59630-0.475505.470704.67220HepG2ACO1
    RPS3AENSG00000145425.519436.1969013809.602800.493006.192104.77920HepG2ADAR
    RPS3AENSG00000145425.526826.3231064505.76430-1.2658011.9604010.93060HepG2AKAP1
    RPS3AENSG00000145425.510950.1678016310.40380-0.574806.407804.86370HepG2AKAP8
    RPS3AENSG00000145425.513888.3794020039.25130-0.529006.965405.80810HepG2AKAP8L
    RPS3AENSG00000145425.529691.5096053375.49810-0.846107.093805.86370HepG2ASCC1
    RPS3AENSG00000145425.531456.8574035714.43950-0.183102.859202.16290HepG2AUH
    RPS3AENSG00000145425.512235.9989016250.51520-0.409403.479102.47560HepG2BCLAF1
    RPS3AENSG00000145425.58258.5054012464.54060-0.5939011.757309.40330HepG2BUD13
    RPS3AENSG00000145425.513409.1965028043.09430-1.0644011.9363010.38770HepG2CNOT7
    RPS3AENSG00000145425.519437.4191014161.439900.456805.722504.26010HepG2YBX3
    RPS3AENSG00000145425.526489.2330031846.07270-0.265704.511703.72590HepG2CELF1
    RPS3AENSG00000145425.512081.6466014181.44770-0.231203.156801.92420HepG2DDX1
    RPS3AENSG00000145425.511093.7161020464.21770-0.8834019.8538018.24240HepG2DDX21
    RPS3AENSG00000145425.527380.0027020020.929700.451507.924306.39620HepG2DDX24
    RPS3AENSG00000145425.519649.0047061796.78130-1.6531017.1370015.72110HepG2DDX3X
    RPS3AENSG00000145425.510496.1572013345.59650-0.346504.503202.82010HepG2DDX52
    RPS3AENSG00000145425.511263.0435018386.20970-0.707008.707107.41840HepG2DDX55
    RPS3AENSG00000145425.521558.7881053072.61240-1.2997011.8116010.64260HepG2DDX6
    RPS3AENSG00000145425.58566.4885013905.82480-0.6989024.8158022.94720HepG2DNAJC21
    RPS3AENSG00000145425.511190.2045013782.52060-0.300608.976507.88280HepG2DNAJC2
    RPS3AENSG00000145425.59246.3835015923.05020-0.7842014.4357012.58610HepG2EEF2
    RPS3AENSG00000145425.59430.8743013274.34770-0.493206.041704.40290HepG2EFTUD2
    RPS3AENSG00000145425.517924.0893051032.00020-1.5095015.4580014.12810HepG2EIF2S1
    RPS3AENSG00000145425.520320.1146014607.086500.476104.829402.43150HepG2EIF3H
    RPS3AENSG00000145425.521457.8499056402.16840-1.3942013.1352011.76680HepG2EIF4A3
    RPS3AENSG00000145425.530899.3249054904.33770-0.829306.934405.87560HepG2EIF4B
    RPS3AENSG00000145425.549099.4238033781.922100.5394021.0055019.16150HepG2EIF4G1
    RPS3AENSG00000145425.546571.5305032360.603900.525103.363802.47120HepG2EIF4G2
    RPS3AENSG00000145425.524980.6664041004.07080-0.7150035.2389033.53190HepG2ETF1
    RPS3AENSG00000145425.59729.0189011552.53700-0.247802.809501.63170HepG2FAM120A
    RPS3AENSG00000145425.513164.0685016802.22760-0.352003.042702.23940HepG2FIP1L1
    RPS3AENSG00000145425.522015.4407027466.02800-0.319102.206301.49730HepG2FUBP3
    RPS3AENSG00000145425.521743.7270056889.84500-1.3876014.8690013.39760HepG2FXR1
    RPS3AENSG00000145425.518442.0404052782.92040-1.5171015.6734014.15070HepG2G3BP1
    RPS3AENSG00000145425.534312.6891056023.75340-0.707305.579504.30180HepG2G3BP2
    RPS3AENSG00000145425.59141.7056011508.98010-0.332203.124502.16780HepG2GEMIN5
    RPS3AENSG00000145425.514444.3597021945.05870-0.603408.174706.42260HepG2GNB2L1
    RPS3AENSG00000145425.56615.521609458.80720-0.515802.570901.95100HepG2GPKOW
    RPS3AENSG00000145425.59020.0757014039.04070-0.6382012.6888011.47020HepG2HNRNPA1
    RPS3AENSG00000145425.510152.0346015615.66750-0.6212011.7779010.43610HepG2HNRNPC
    RPS3AENSG00000145425.533820.9327031189.680400.116702.163701.55740HepG2HNRNPL
    RPS3AENSG00000145425.512600.1566015512.43860-0.300006.817505.90380HepG2HNRNPU
    RPS3AENSG00000145425.520490.9509053655.97470-1.3888013.6106012.24120HepG2IGF2BP2
    RPS3AENSG00000145425.523065.6485050340.56700-1.126006.681305.19290HepG2IGF2BP3
    RPS3AENSG00000145425.537151.7235053962.59010-0.538503.522902.37350HepG2KHSRP
    RPS3AENSG00000145425.511676.1746017746.11480-0.603905.371703.62780HepG2KRR1
    RPS3AENSG00000145425.515413.0170020498.41810-0.411403.010602.14130HepG2LARP4
    RPS3AENSG00000145425.517879.2493021501.06860-0.266102.681401.56540HepG2LARP7
    RPS3AENSG00000145425.519107.1645056909.62760-1.5746017.5804016.00120HepG2MAGOH
    RPS3AENSG00000145425.520064.8289057231.00320-1.5121016.3542014.91670HepG2MATR3
    RPS3AENSG00000145425.58387.6006013528.30280-0.689705.126003.72150HepG2METAP2
    RPS3AENSG00000145425.512858.3424058581.43860-2.1877025.7085023.91520HepG2NCBP2
    RPS3AENSG00000145425.511244.780408004.661100.490203.155702.35750HepG2NSUN2
    RPS3AENSG00000145425.524056.6592052181.27090-1.1171010.052208.69760HepG2PABPC4
    RPS3AENSG00000145425.526625.6640054432.33260-1.0316049.9644047.99470HepG2PCBP1
    RPS3AENSG00000145425.515517.8261020423.08890-0.396302.309601.35850HepG2PCBP2
    RPS3AENSG00000145425.57906.3665010689.49490-0.435108.009006.00290HepG2PKM
    RPS3AENSG00000145425.516875.4861013232.241600.350807.568206.36640HepG2PRPF4
    RPS3AENSG00000145425.515484.9133055385.46440-1.83860168.23590165.61770HepG2PTBP1
    RPS3AENSG00000145425.518838.1491032411.41430-0.7828010.589509.52380HepG2PUF60
    RPS3AENSG00000145425.520906.9702034406.80780-0.7187057.0595055.09980HepG2PUM1
    RPS3AENSG00000145425.520061.8402034381.26500-0.7772024.9197023.03230HepG2PUM2
    RPS3AENSG00000145425.512819.5895020318.39920-0.664408.020707.06310HepG2PUS1
    RPS3AENSG00000145425.521679.6198059986.95720-1.4683098.0572095.23430HepG2QKI
    RPS3AENSG00000145425.521303.4662054440.83600-1.3536060.9908058.19240HepG2RBM25
    RPS3AENSG00000145425.516736.6388021053.92600-0.331103.295202.13530HepG2RCC2
    RPS3AENSG00000145425.516764.3653061639.92520-1.87850168.44810165.94030HepG2NELFE
    RPS3AENSG00000145425.529693.6905057406.99860-0.9511060.9180058.85210HepG2RECQL
    RPS3AENSG00000145425.512404.9909014769.95950-0.251702.351801.71380HepG2RPLP0
    RPS3AENSG00000145425.54879.3369012577.58590-1.3661056.8610054.75100HepG2RPS19
    RPS3AENSG00000145425.512103.7303023911.18310-0.9822024.1672022.01760HepG2RPS2
    RPS3AENSG00000145425.54227.4335028159.96630-2.7358085.7209081.48650HepG2RPS3A
    RPS3AENSG00000145425.517510.5862024408.58160-0.479206.122704.51790HepG2RPS5
    RPS3AENSG00000145425.58346.6029012623.58550-0.596908.424306.81450HepG2SERBP1
    RPS3AENSG00000145425.526023.8566057666.05240-1.1479079.9058077.59470HepG2SF3B4
    RPS3AENSG00000145425.511197.8084016110.34130-0.5248030.6125028.84990HepG2SMN1
    RPS3AENSG00000145425.533826.5362038709.28910-0.194503.781303.22350HepG2SRFBP1
    RPS3AENSG00000145425.522553.2871017512.896100.364803.599901.75100HepG2SRP68
    RPS3AENSG00000145425.519841.1287060189.79840-1.60100126.25320124.26280HepG2SRSF1
    RPS3AENSG00000145425.519802.2936032002.34190-0.6925033.3706031.53580HepG2SRSF5
    RPS3AENSG00000145425.512011.6781013469.98450-0.165302.417501.76400HepG2SRSF7
    RPS3AENSG00000145425.526803.1569048966.68070-0.8694057.8247055.96820HepG2SRSF9
    RPS3AENSG00000145425.528273.4402033609.39730-0.249405.400104.73050HepG2SSB
    RPS3AENSG00000145425.522937.4853017694.228400.374302.952401.62940HepG2SSRP1
    RPS3AENSG00000145425.522561.3351036394.80170-0.6899045.1656043.18940HepG2SUCLG1
    RPS3AENSG00000145425.511219.7859018304.02250-0.706108.935707.83250HepG2SUPV3L1
    RPS3AENSG00000145425.539996.8634054097.95340-0.4357011.0314010.02980HepG2TAF15
    RPS3AENSG00000145425.55645.061408800.80930-0.640603.718402.89350HepG2TARDBP
    RPS3AENSG00000145425.530824.0674049711.81600-0.6895017.7585015.70560HepG2TIA1
    RPS3AENSG00000145425.54485.1231015073.86890-1.74880109.82120107.56720HepG2TIAL1
    RPS3AENSG00000145425.521299.9116031665.65760-0.5721011.244309.27640HepG2TUFM
    RPS3AENSG00000145425.510654.1574014371.25870-0.431805.578204.70260HepG2U2AF1
    RPS3AENSG00000145425.56807.7425016676.36640-1.292602.532201.59070HepG2U2AF2
    RPS3AENSG00000145425.521961.7618033518.30920-0.610005.578804.36550HepG2UBE2L3
    RPS3AENSG00000145425.516817.2182010813.319400.637009.377207.98120HepG2UCHL5
    RPS3AENSG00000145425.510079.1739015056.93770-0.5791025.6623023.97590HepG2UPF1
    RPS3AENSG00000145425.512168.8936015476.51430-0.346907.586105.95880HepG2UTP18
    RPS3AENSG00000145425.516000.9490021674.69060-0.437902.915001.82690HepG2XRCC6
    RPS3AENSG00000145425.525544.2007018018.277600.503406.842605.71700HepG2XRN2
    RPS3AENSG00000145425.510755.7587013058.29800-0.279907.656706.62920HepG2ZC3H8
    RPS3AENSG00000145425.512856.8328016559.76570-0.3651014.7222013.70740HepG2ZNF622
    RPS3AENSG00000145425.518066.6396023270.42280-0.365204.841703.22580K562AARS
    RPS3AENSG00000145425.545458.6029031437.554400.5320022.0344020.53990K562AGGF1
    RPS3AENSG00000145425.544835.4962034545.180300.376104.681603.32290K562AKAP8
    RPS3AENSG00000145425.551431.1078032712.215200.6527012.9209011.35910K562AKAP8L
    RPS3AENSG00000145425.576216.8202059321.220700.361504.406303.69770K562AQR
    RPS3AENSG00000145425.550996.4776034323.016300.5711016.6092014.16130K562ATP5C1
    RPS3AENSG00000145425.524083.2611017182.908700.487006.279504.95280K562BOP1
    RPS3AENSG00000145425.544987.4365037569.554000.259902.839701.64490K562CCDC124
    RPS3AENSG00000145425.524117.1611018270.625300.400406.516705.31150K562CPSF6
    RPS3AENSG00000145425.589441.3748071443.029000.324004.636803.36370K562CELF1
    RPS3AENSG00000145425.526930.6520034255.59220-0.347108.380207.32650K562DDX47
    RPS3AENSG00000145425.548085.9823035200.593900.4499011.680409.64080K562DKC1
    RPS3AENSG00000145425.57784.0679010660.64220-0.453702.534401.57540K562EIF3A
    RPS3AENSG00000145425.523819.3233032460.51840-0.446604.546103.49380K562EIF4A3
    RPS3AENSG00000145425.540681.1727023307.624300.803506.555505.20960K562FIP1L1
    RPS3AENSG00000145425.522958.8889033757.70960-0.556209.643908.59470K562FXR1
    RPS3AENSG00000145425.565683.5665045046.090200.5440010.584109.07900K562GRSF1
    RPS3AENSG00000145425.517472.5800025455.46590-0.5429010.795909.68080K562HNRNPC
    RPS3AENSG00000145425.533466.7532019174.149000.803507.140205.53500K562HNRNPM
    RPS3AENSG00000145425.541501.4040047388.07750-0.191402.267301.45860K562HNRNPU
    RPS3AENSG00000145425.569939.4087031595.568801.1463017.5184015.64290K562HSPD1
    RPS3AENSG00000145425.514279.4590010949.762000.382903.575701.87160K562ILF3
    RPS3AENSG00000145425.555382.6013034715.784300.6737014.9110012.44100K562KIF1C
    RPS3AENSG00000145425.518770.9436024659.59230-0.393605.196403.20590K562LARP7
    RPS3AENSG00000145425.535517.7765046527.18930-0.389505.398104.21010K562MAGOH
    RPS3AENSG00000145425.546182.8036033231.590100.474705.503403.80880K562MAK16
    RPS3AENSG00000145425.538040.6804046434.25780-0.287603.341202.31560K562MATR3
    RPS3AENSG00000145425.550482.9585038890.454500.376302.593701.71780K562MBNL1
    RPS3AENSG00000145425.547798.6761027259.396700.810106.241004.71400K562NAA15
    RPS3AENSG00000145425.533588.5564028897.002300.216908.207107.01890K562NSUN2
    RPS3AENSG00000145425.521005.5812025658.39910-0.288702.244701.49620K562PCBP3
    RPS3AENSG00000145425.515787.1853019680.92330-0.318004.435403.41880K562POLR2G
    RPS3AENSG00000145425.547699.1553026463.516300.849908.185006.59870K562PPIG
    RPS3AENSG00000145425.519329.5697022824.35590-0.239802.178501.38450K562PSIP1
    RPS3AENSG00000145425.528066.2978045203.36190-0.6876016.7995015.22750K562PTBP1
    RPS3AENSG00000145425.578988.7238067429.536200.228202.331901.35960K562PUM1
    RPS3AENSG00000145425.574182.9917032441.438401.1932036.1715034.14030K562PUS1
    RPS3AENSG00000145425.553612.9996036302.803100.562403.709702.02690K562RAVER1
    RPS3AENSG00000145425.554563.1902031609.379800.7875030.3674028.31960K562RBM15
    RPS3AENSG00000145425.535322.6640043349.86370-0.295402.879102.01820K562RBM22
    RPS3AENSG00000145425.545105.6963036084.188900.321804.009802.36370K562RBM25
    RPS3AENSG00000145425.531141.6149042253.83770-0.440204.920402.90150K562RBM34
    RPS3AENSG00000145425.514191.6822020828.43000-0.5535011.688509.61960K562RCC2
    RPS3AENSG00000145425.531355.1846045617.57250-0.540907.298505.44680K562NELFE
    RPS3AENSG00000145425.521879.3311027896.27420-0.350502.155501.43930K562RPS19
    RPS3AENSG00000145425.53394.3533029266.86020-3.1081032.2616028.16910K562RPS3A
    RPS3AENSG00000145425.515838.7597027035.61080-0.7714012.4285010.20600K562RPS3
    RPS3AENSG00000145425.544818.3338028001.746300.678507.240105.12860K562RRP9
    RPS3AENSG00000145425.511621.8293017536.00130-0.5935011.658109.54990K562SAFB
    RPS3AENSG00000145425.537950.8000028514.141200.4124010.289108.79110K562SF3A3
    RPS3AENSG00000145425.516453.0340019744.36370-0.263102.406301.46690K562SRFBP1
    RPS3AENSG00000145425.524875.1606029213.36910-0.231906.119304.79220K562SRPK2
    RPS3AENSG00000145425.528723.5611044313.28930-0.6255014.6880013.05410K562SRSF1
    RPS3AENSG00000145425.520063.0735026101.67870-0.379605.699404.08320K562SRSF4
    RPS3AENSG00000145425.539305.5215033886.346600.213903.112901.73740K562SSB
    RPS3AENSG00000145425.544181.4395030576.224700.530903.360601.84380K562SSRP1
    RPS3AENSG00000145425.516641.2231019740.40120-0.246402.955902.10490K562SYNCRIP
    RPS3AENSG00000145425.534342.3785043262.53000-0.333104.665703.56160K562TIA1
    RPS3AENSG00000145425.516823.1022021952.70810-0.384003.716802.63060K562TIAL1
    RPS3AENSG00000145425.518458.9037023326.55860-0.337703.999102.81870K562TRIM56
    RPS3AENSG00000145425.550804.7464032892.342000.627103.462201.96170K562UTP18
    RPS3AENSG00000145425.531643.2947026217.762300.271303.029502.11530K562WDR3
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for RPS3A is not available on ENCORE database.





    10 RBPs can affect the splicing of RPS3A :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SERPS3AENSG00000145425.5chr4+152021618152021740152020819152020866152024022152025357-0.118000.001020.02742excludedHepG2HNRNPK
    SERPS3AENSG00000145425.5chr4+152022126152022237152020780152020866152024022152024231-0.362000.000150.01778excludedHepG2TBRG4
    SERPS3AENSG00000145425.5chr4+1520221261520222371520207801520208661520240221520242310.217000.003680.03620includedK562AQR
    SERPS3AENSG00000145425.5chr4+1520221261520222371520207801520208661520240221520242310.282000.000890.01544includedK562PUS1
    SERPS3AENSG00000145425.5chr4+152022126152022237152020780152020866152024022152024231-0.292000.000000.00006excludedK562U2AF1
    SERPS3AENSG00000145425.5chr4+1520221261520222371520207801520208661520240221520242310.223000.003270.08178includedK562UTP18
    SERPS3AENSG00000145425.5chr4+152022126152022237152020780152020866152024022152024231-0.306000.000110.00678excludedK562HNRNPU
    SERPS3AENSG00000145425.5chr4+1520221261520222371520207801520208661520240221520242310.232000.003440.06900includedK562RBM15
    SERPS3AENSG00000145425.5chr4+152022126152022237152020780152020866152024022152024231-0.205000.007220.09180excludedK562HNRNPC
    A5SSRPS3AENSG00000145425.5chr4+1520241391520243131520241391520242311520256231520258040.143000.002920.04624longerK562AQR
    MXERPS3AENSG00000145425.5chr4+152024022152024231152025328152025438152022126152022314152025623152025680-0.094000.000000.000062includedK562DHX30

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for RPS3A is not avaliable on ENCORE database.