PDK2

General Information

Gene Name       : PDK2
Gene ID             : ENSG00000005882.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PDK2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PDK2ENSG00000005882.116.178.387.28ENCSR000AEF
HepG2PDK2ENSG00000005882.1160.0720.1840.12ENCSR985KAT
K562PDK2ENSG00000005882.111.981.321.65ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDK2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PDK2 RNA is bound by 7 proteins.  







eCLIP assay for PDK2 is not avaliable on ENCORE database.





7 proteins are bound to PDK2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174818774948187826+3'-UTR5.035088.61963HepG2AKAP1
chr174818791448188035+3'-UTR5.9327315.56233HepG2AKAP1
chr174818829648188372+3'-UTR4.8681310.36598HepG2AKAP1
chr174818828948188365+3'-UTR5.208857.98718HepG2UPF1
chr174818819348188255+3'-UTR4.757586.64523HepG2AKAP1
chr174818772248187814+3'-UTR3.723963.13435HepG2STAU2
chr174818757348187702+3'-UTR4.8418910.73972HepG2UPF1
chr174818763048187749+3'-UTR5.3387610.29040HepG2AKAP1
chr174818808548188139+3'-UTR4.160073.87385HepG2AKAP1
chr174818829948188363+3'-UTR3.733204.92926HepG2LARP4
chr174818782648187875+3'-UTR4.198714.40113HepG2AKAP1
chr174818772948187821+3'-UTR3.702578.05338HepG2UPF1
chr174818789348188027+3'-UTR5.3624419.50167HepG2UPF1
chr174817272348172857+5'-UTR,CDS,intron-Distal,intron-Proximal5.6750411.78230HepG2DDX3X
chr174818558648185649+CDS,intron-Proximal3.581364.54206HepG2PRPF8
chr174818644948186555+intron-Distal,intron-Proximal4.727035.59072HepG2HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDK2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDK2 is not available on ENCORE database.

  • 90 RBPs can affect the levels of PDK2.  








The Knockdown/knockout RNA-Seq assay for PDK2 is not available on ENCORE database.





90 RBPs can affect the gene expression of PDK2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDK2ENSG00000005882.71299.84160848.636600.615005.700204.40220HepG2ABCF1
PDK2ENSG00000005882.7261.18410467.61490-0.8403010.299409.28100HepG2ACO1
PDK2ENSG00000005882.7370.08580836.15600-1.1759013.1887012.11670HepG2AKAP1
PDK2ENSG00000005882.7697.22150853.27080-0.291402.632701.96140HepG2AUH
PDK2ENSG00000005882.7536.69640810.42760-0.594604.084603.37360HepG2BOP1
PDK2ENSG00000005882.7388.45400580.10800-0.578604.701503.72910HepG2CALR
PDK2ENSG00000005882.7297.94120657.27610-1.1415013.3721011.81190HepG2CIRBP
PDK2ENSG00000005882.7725.78480467.501400.634509.200108.12460HepG2CKAP4
PDK2ENSG00000005882.7443.15150744.03510-0.747602.828902.13500HepG2CPSF6
PDK2ENSG00000005882.7400.54680566.85010-0.501004.305703.53560HepG2CELF1
PDK2ENSG00000005882.7652.83020432.471400.594008.083506.78800HepG2DDX19B
PDK2ENSG00000005882.7313.04340688.19690-1.136509.714708.63320HepG2DDX6
PDK2ENSG00000005882.7474.66670341.837300.473503.070902.04230HepG2DHX30
PDK2ENSG00000005882.7906.67150447.377701.0190020.6117019.16450HepG2DKC1
PDK2ENSG00000005882.7526.60510354.404700.571202.185301.55240HepG2DNAJC21
PDK2ENSG00000005882.7673.96620351.335900.9397017.9273016.40390HepG2DNAJC2
PDK2ENSG00000005882.7738.96590475.614900.635604.114703.01450HepG2EEF2
PDK2ENSG00000005882.7239.10200375.91980-0.652803.037801.87060HepG2AGO1
PDK2ENSG00000005882.7445.60790661.35620-0.569703.876303.18140HepG2EIF2S1
PDK2ENSG00000005882.7365.80240643.84890-0.815708.820906.88340HepG2EIF2S2
PDK2ENSG00000005882.7230.97290386.01560-0.740902.673401.78380HepG2EIF3D
PDK2ENSG00000005882.7351.23210711.71210-1.018908.413507.24630HepG2EIF4B
PDK2ENSG00000005882.7404.88460601.30360-0.570605.692104.56580HepG2EIF4G1
PDK2ENSG00000005882.7730.81000979.68530-0.422805.428104.63430HepG2ETF1
PDK2ENSG00000005882.7153.46770300.19330-0.968004.118202.59250HepG2FKBP4
PDK2ENSG00000005882.7532.06660684.09880-0.362601.948301.38580HepG2G3BP1
PDK2ENSG00000005882.7926.66830726.484200.351002.129801.35390HepG2G3BP2
PDK2ENSG00000005882.71388.51370843.472300.719007.457006.43600HepG2GPKOW
PDK2ENSG00000005882.7565.77870357.800700.661003.367202.66290HepG2HNRNPA1
PDK2ENSG00000005882.7535.50010398.007300.428002.342701.69990HepG2HNRNPC
PDK2ENSG00000005882.7315.27570200.031600.656303.281401.61790HepG2HNRNPD
PDK2ENSG00000005882.7712.17740534.911300.412803.970603.12700HepG2HNRNPF
PDK2ENSG00000005882.7245.85200693.11510-1.4953017.7005016.09220HepG2HNRNPK
PDK2ENSG00000005882.7551.48840804.93660-0.545504.150603.39480HepG2HNRNPLL
PDK2ENSG00000005882.7409.41900591.31870-0.530404.117602.97750HepG2HNRNPM
PDK2ENSG00000005882.7575.25180395.374400.540905.573204.73740HepG2HNRNPU
PDK2ENSG00000005882.7803.89840526.734800.609804.541703.63450HepG2IGF2BP1
PDK2ENSG00000005882.7513.71100695.31010-0.436702.644301.98210HepG2IGF2BP2
PDK2ENSG00000005882.7334.88390652.76590-0.962903.362002.27660HepG2IGF2BP3
PDK2ENSG00000005882.7560.08340403.858400.471704.726003.78950HepG2ILF2
PDK2ENSG00000005882.7615.46400427.451300.525802.962201.91220HepG2KIF1C
PDK2ENSG00000005882.7936.03800580.716400.688604.836703.17700HepG2KRR1
PDK2ENSG00000005882.7408.54830741.97790-0.860906.850405.89010HepG2MATR3
PDK2ENSG00000005882.7113.00000211.08370-0.901503.657502.62560HepG2PABPC1
PDK2ENSG00000005882.7569.96510352.638900.692607.833206.64420HepG2PPIL4
PDK2ENSG00000005882.7802.99110576.893500.477004.177603.46260HepG2PUF60
PDK2ENSG00000005882.7721.16350476.294400.598407.957007.00290HepG2PUS1
PDK2ENSG00000005882.7568.90620830.12050-0.545105.807904.95050HepG2QKI
PDK2ENSG00000005882.7221.40480384.78990-0.797402.231601.59330HepG2RAVER1
PDK2ENSG00000005882.7556.65700818.83220-0.556806.150105.45180HepG2RBM22
PDK2ENSG00000005882.7682.68140853.01930-0.321402.784802.24260HepG2NELFE
PDK2ENSG00000005882.7506.36310375.687500.430501.836401.32550HepG2RPS19
PDK2ENSG00000005882.7409.31700231.936200.819405.014103.93740HepG2RPS3A
PDK2ENSG00000005882.7120.35350275.03470-1.192306.382105.24330HepG2RRP9
PDK2ENSG00000005882.7487.72580352.086500.470004.057703.30290HepG2SAFB2
PDK2ENSG00000005882.7358.80680220.301400.703603.292201.59660HepG2SBDS
PDK2ENSG00000005882.7545.10300376.938600.532103.086902.09190HepG2SERBP1
PDK2ENSG00000005882.7757.07980392.759300.946702.660101.34380HepG2SF1
PDK2ENSG00000005882.7507.99440779.95640-0.618604.136903.30340HepG2SF3A3
PDK2ENSG00000005882.7521.25590798.00760-0.614407.906006.98800HepG2SF3B4
PDK2ENSG00000005882.7718.38820553.196100.376903.948703.13340HepG2SLBP
PDK2ENSG00000005882.7578.62800375.321200.624403.903301.97770HepG2SND1
PDK2ENSG00000005882.7683.19380350.715300.961903.080001.67970HepG2SNRNP200
PDK2ENSG00000005882.7279.99010924.83490-1.7238052.2868050.82630HepG2SRFBP1
PDK2ENSG00000005882.7553.72250857.23080-0.630504.302603.02560HepG2SRSF3
PDK2ENSG00000005882.7814.57940569.624600.515903.693402.98970HepG2SRSF5
PDK2ENSG00000005882.7680.01820525.533000.371703.218002.47360HepG2SRSF7
PDK2ENSG00000005882.7276.48250677.64410-1.2933026.9479025.55910HepG2SRSF9
PDK2ENSG00000005882.7396.11040647.79760-0.709609.358108.32910HepG2SUCLG1
PDK2ENSG00000005882.7241.42080359.02470-0.572502.348801.71910HepG2SUPV3L1
PDK2ENSG00000005882.7558.69040748.67920-0.422303.896003.24930HepG2TAF15
PDK2ENSG00000005882.7966.47490568.908100.764403.396402.21760HepG2TBRG4
PDK2ENSG00000005882.7507.73320384.104600.402502.686602.19220HepG2TIAL1
PDK2ENSG00000005882.7588.48670387.619300.602305.845505.07980HepG2TRIM56
PDK2ENSG00000005882.7424.96310733.11760-0.786707.628706.58880HepG2U2AF1
PDK2ENSG00000005882.7117.96720212.04630-0.846002.884702.11080HepG2UCHL5
PDK2ENSG00000005882.7453.58020691.70020-0.608807.846206.76810HepG2UPF1
PDK2ENSG00000005882.7438.12970667.81220-0.608106.790205.92210HepG2UTP3
PDK2ENSG00000005882.7315.96070207.748700.604802.828901.71700HepG2XPO5
PDK2ENSG00000005882.7643.38260353.422200.864205.260004.26880HepG2XRN2
PDK2ENSG00000005882.7759.38680629.853800.269702.211501.60140HepG2ZC3H8
PDK2ENSG00000005882.7544.45390760.74040-0.482606.232105.49660HepG2ZNF622
PDK2ENSG00000005882.782.2598026.719101.622204.754703.13000K562ABCF1
PDK2ENSG00000005882.773.3895029.588701.310403.479101.83480K562CKAP4
PDK2ENSG00000005882.755.0958026.232701.070502.275301.67570K562DDX47
PDK2ENSG00000005882.747.4783019.199901.306102.585901.76750K562FIP1L1
PDK2ENSG00000005882.792.2726018.418202.324709.131508.09760K562HNRNPC
PDK2ENSG00000005882.783.6773041.350101.016802.602801.75750K562METAP2
PDK2ENSG00000005882.755.8812029.049200.943801.940101.30200K562NSUN2
PDK2ENSG00000005882.799.7195031.983301.640504.316503.27640K562PCBP3
PDK2ENSG00000005882.771.4807024.528001.543004.517903.49090K562POLR2G
PDK2ENSG00000005882.766.7430024.462901.447903.349501.35840K562PPIL4
PDK2ENSG00000005882.750.8411016.514801.622103.289702.29160K562PSIP1
PDK2ENSG00000005882.768.6135034.065401.010102.342101.45730K562PUM2
PDK2ENSG00000005882.757.1207015.416501.889404.366603.33590K562RPS19
PDK2ENSG00000005882.753.4854015.883901.751504.043502.89680K562TIAL1
PDK2ENSG00000005882.764.6552029.065701.153402.967002.06890K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDK2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PDK2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PDK2 is not avaliable on ENCORE database.