CLCN6

General Information

Gene Name       : CLCN6
Gene ID             : ENSG00000011021.22
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CLCN6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CLCN6ENSG00000011021.2210.4211.2510.84ENCSR000AEF
HepG2CLCN6ENSG00000011021.2215.0915.0415.06ENCSR985KAT
K562CLCN6ENSG00000011021.2213.1914.0413.61ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CLCN6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CLCN6 RNA is bound by 24 proteins.  







eCLIP assay for CLCN6 is not avaliable on ENCORE database.





24 proteins are bound to CLCN6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11189849011898538+3'-UTR,CDS,intron-Proximal4.153015.93840HepG2PRPF8
chr11189709011897205+3'-UTR,CDS3.188434.23468HepG2UCHL5
chr11190204411902089+3'-UTR,intron-Distal4.109695.99105K562UPF1
chr11189350511893597+3'-UTR,CDS,intron-Proximal3.758455.37841K562SF3B4
chr11189356011893608+3'-UTR,CDS,intron-Proximal3.669674.77019K562BUD13
chr11190310611903165+3'-UTR,intron-Distal4.932536.15718HepG2FUBP3
chr11190302911903106+3'-UTR,intron-Distal4.096589.04183HepG2FUBP3
chr11190300611903105+3'-UTR,intron-Distal3.702365.78005K562KHSRP
chr11190060511900702+3'-UTR3.121074.63794HepG2AKAP1
chr11190218611902232+3'-UTR,intron-Distal3.523013.73678HepG2UPF1
chr11190189311901975+3'-UTR,intron-Distal5.0581413.35513K562UPF1
chr11190175011901818+3'-UTR,intron-Distal4.5748210.21308K562UPF1
chr11190028911900338+3'-UTR3.051786.27353HepG2GRWD1
chr11189404211894058+3'-UTR,CDS4.102513.14999HepG2GRWD1
chr11189870911898753+3'-UTR,CDS,intron-Proximal3.561993.67894HepG2AQR
chr11189443011894496+3'-UTR,CDS,intron-Proximal4.413429.43475HepG2PRPF8
chr11189715511897209+3'-UTR,CDS3.522403.95301K562ZNF622
chr11190041911900461+3'-UTR4.235085.64484HepG2PRPF8
chr11188935511889419+3'-UTR,CDS,intron-Proximal5.2338634.18422HepG2PRPF8
chr11190061111900704+3'-UTR4.256107.15603K562UPF1
chr11189404211894063+3'-UTR,CDS3.479405.30095HepG2PPIG
chr11190157911901614+3'-UTR,intron-Distal3.545374.14074K562UPF1
chr11189430511894356+3'-UTR,CDS3.713114.82082K562ZNF622
chr11189714611897211+3'-UTR,CDS3.039278.53663HepG2PPIG
chr11190311411903167+3'-UTR,intron-Distal3.769728.21873HepG2ZC3H11A
chr11189714211897231+3'-UTR,CDS,intron-Proximal3.726574.76274K562UCHL5
chr11190026911900319+3'-UTR,CDS5.0308011.08513HepG2PPIG
chr11189702611897100+3'-UTR,CDS,intron-Proximal3.341503.75245K562BUD13
chr11190232511902378+3'-UTR,intron-Distal4.271967.50817K562UPF1
chr11190079611900873+3'-UTR3.616824.00430HepG2UPF1
chr11189600111896077+3'-UTR,CDS,intron-Proximal3.7214111.30378HepG2BUD13
chr11188934211889444+3'-UTR,CDS,intron-Proximal3.633988.03773K562PRPF8
chr11190174711901811+3'-UTR,intron-Distal4.608443.35877HepG2UPF1
chr11190166111901710+3'-UTR,intron-Distal3.617934.44982K562UPF1
chr11190100211901083+3'-UTR4.3883719.20883HepG2U2AF2
chr11189871611898796+3'-UTR,CDS,intron-Proximal6.0215612.64691K562AQR
chr11190049811900661+3'-UTR4.9925810.73972HepG2UPF1
chr11189407311894203+3'-UTR,CDS,intron-Distal,intron-Proximal5.061996.38747HepG2AQR
chr11186628911866359+5'-UTR,CDS3.8827213.27527HepG2NCBP2
chr11186629311866377+5'-UTR,CDS3.278323.12941K562UCHL5
chr11188819311888356+CDS,intron-Proximal3.393515.73570K562PRPF8
chr11187592011876003+CDS,intron-Distal,intron-Proximal3.067313.90373HepG2AQR
chr11188460111884614+CDS,intron-Proximal4.9196011.99167HepG2PPIG
chr11187596011875969+CDS,intron-Distal,intron-Proximal4.2848712.18291HepG2PPIG
chr11187954411879560+CDS,intron-Proximal3.112258.38788HepG2PPIG
chr11188375811883779+CDS,intron-Proximal4.296994.67299K562DDX24
chr11186635911866409+CDS,intron-Proximal3.8779412.68626HepG2NCBP2
chr11188822511888310+CDS,intron-Proximal4.6958413.40522HepG2PRPF8
chr11188454311884618+CDS,intron-Proximal3.829683.42611HepG2SRSF1
chr11188382511883892+CDS,intron-Proximal4.1707523.98251HepG2PPIG
chr11187955711879611+CDS5.0335114.27743K562DDX24
chr11186718111867253+CDS,intron-Proximal3.138976.46309HepG2NCBP2
chr11188285111882859+CDS,intron-Proximal3.988706.51082HepG2PPIG
chr11187667011876741+CDS,intron-Proximal4.7306636.48475HepG2PPIG
chr11188384211883880+CDS3.433504.48818HepG2GRWD1
chr11187665511876711+CDS,intron-Proximal3.832275.00154HepG2AQR
chr11187954311879557+CDS,intron-Proximal5.578287.00086K562DDX24
chr11187956011879612+CDS,intron-Proximal4.0427223.54182HepG2PPIG
chr11187667211876738+CDS,intron-Proximal3.6197313.63205HepG2BCLAF1
chr11188387011883932+CDS,intron-Proximal4.1267711.57027HepG2PRPF8
chr11187591311875966+CDS,intron-Distal3.515708.47761HepG2BCLAF1
chr11188823311888265+CDS3.366157.20311HepG2PPIG
chr11188275911882775+CDS4.6768910.78601HepG2PPIG
chr11188460711884654+CDS,intron-Proximal4.319795.97994K562AQR
chr11188927211889302+CDS3.359956.89519HepG2PPIG
chr11188375811883810+CDS,intron-Proximal3.016727.20683HepG2PPIG
chr11189873911898787+CDS,intron-Proximal3.937227.39116HepG2RBM22
chr11186718911867195+CDS4.907714.77100HepG2BUD13
chr11188382311883897+CDS,intron-Proximal3.641493.21539HepG2SRSF1
chr11188452711884580+CDS,intron-Proximal3.878165.18845HepG2U2AF2
chr11188275111882759+CDS,intron-Proximal3.730189.66778HepG2PPIG
chr11187669911876740+CDS,intron-Proximal3.151207.41653HepG2BUD13
chr11187671111876737+CDS3.650096.02304HepG2GRWD1
chr11188279411882859+CDS,intron-Proximal5.935418.32974K562DDX24
chr11188454511884564+CDS3.930533.80193HepG2GRWD1
chr11187961011879652+CDS,intron-Proximal4.336775.89850HepG2AQR
chr11187954511879559+CDS4.422564.72880HepG2GRWD1
chr11188457011884601+CDS4.8023015.70082HepG2PPIG
chr11188283711882918+CDS,intron-Proximal4.027315.63763K562AQR
chr11188844411888548+CDS,intron-Distal,intron-Proximal5.019575.89856K562PTBP1
chr11188855711888624+CDS,intron-Distal3.552063.95937K562UCHL5
chr11187954611879607+CDS3.107604.25553HepG2UCHL5
chr11188374411883794+CDS,intron-Proximal3.414183.76090HepG2U2AF2
chr11188625611886266+CDS3.978934.80912HepG2PPIG
chr11188928311889327+CDS3.778323.01428K562UCHL5
chr11188923511889296+CDS,intron-Proximal3.4894614.57530HepG2SF3A3
chr11187667111876742+CDS,intron-Proximal5.5246813.09245K562DDX24
chr11188454111884570+CDS,intron-Proximal3.6375411.11819HepG2PPIG
chr11187667411876734+CDS4.189883.01428K562UCHL5
chr11187590311875960+CDS,intron-Distal3.4729714.79893HepG2PPIG
chr11188721911887272+CDS3.006979.88362HepG2PPIG
chr11188375611883816+CDS,intron-Proximal3.434097.83468HepG2EFTUD2
chr11187673211876788+CDS,intron-Proximal4.721835.17615K562AQR
chr11189413711894196+intron-Distal,intron-Proximal4.095055.42009HepG2EFTUD2
chr11189081011890891+intron-Distal4.1016811.00705HepG2HNRNPL
chr11189089111890950+intron-Distal3.567059.19851HepG2HNRNPL
chr11188462111884728+intron-Distal,intron-Proximal4.1151315.66865HepG2EFTUD2
chr11186645211866518+intron-Distal,intron-Proximal5.096223.81753HepG2EFTUD2
chr11186640611866508+intron-Distal,intron-Proximal6.0273112.10660K562AQR
chr11189414711894223+intron-Distal,intron-Proximal4.750847.44287K562TARDBP
chr11188286111882877+intron-Proximal4.758646.46301HepG2PPIG
chr11189385711893907+intron-Proximal4.172003.25678HepG2SF3B4
chr11188920311889235+intron-Proximal4.7879313.98010HepG2SF3A3
chr11188462311884687+intron-Proximal4.450806.46853K562EFTUD2
chr11189757311897626+intron-Proximal5.153017.02967HepG2PRPF8
chr11186641711866465+intron-Proximal3.354477.38298HepG2AQR
chr11187674511876819+intron-Proximal4.893064.83371K562EFTUD2
chr11188447911884542+intron-Proximal4.371787.48125HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CLCN6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CLCN6 is not available on ENCORE database.

  • 125 RBPs can affect the levels of CLCN6.  








The Knockdown/knockout RNA-Seq assay for CLCN6 is not available on ENCORE database.





125 RBPs can affect the gene expression of CLCN6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CLCN6ENSG00000011021.17800.961101197.41270-0.580104.218802.92200HepG2AATF
CLCN6ENSG00000011021.171428.754202019.35500-0.499105.448104.65120HepG2ACO1
CLCN6ENSG00000011021.171748.150601105.044500.661608.116106.51970HepG2ADAR
CLCN6ENSG00000011021.17630.624003139.25070-2.3156065.1729063.15860HepG2AKAP1
CLCN6ENSG00000011021.171761.992102597.38690-0.559906.020804.88460HepG2ASCC1
CLCN6ENSG00000011021.172815.076202002.778600.491109.999308.82950HepG2AUH
CLCN6ENSG00000011021.171500.496901108.267000.437003.090202.13700HepG2BCLAF1
CLCN6ENSG00000011021.171773.464501500.310900.241202.017501.35200HepG2CALR
CLCN6ENSG00000011021.171616.091802018.54790-0.320801.930101.36110HepG2CKAP4
CLCN6ENSG00000011021.172210.055601209.126600.870007.618806.52450HepG2CPSF6
CLCN6ENSG00000011021.171639.550902100.86810-0.357702.456601.41800HepG2CPSF7
CLCN6ENSG00000011021.17804.107201226.54130-0.609102.911001.50870HepG2CSTF2T
CLCN6ENSG00000011021.171145.527001650.14470-0.526608.643707.62860HepG2CELF1
CLCN6ENSG00000011021.173106.853501774.138800.8082036.4317034.34940HepG2DAZAP1
CLCN6ENSG00000011021.171262.450301867.44480-0.564807.280706.03660HepG2DDX19B
CLCN6ENSG00000011021.171558.315701292.620900.269602.248301.43530HepG2DDX24
CLCN6ENSG00000011021.173223.468302050.573100.652503.952602.42110HepG2DDX47
CLCN6ENSG00000011021.17815.238601254.13800-0.621405.505204.45920HepG2DDX55
CLCN6ENSG00000011021.172370.600601373.059200.787805.132603.81330HepG2DDX59
CLCN6ENSG00000011021.173153.388602053.193600.618908.337006.68040HepG2DDX5
CLCN6ENSG00000011021.172030.661701073.205100.919906.730305.25320HepG2DHX30
CLCN6ENSG00000011021.172827.134701931.880300.5492011.2898010.11380HepG2DKC1
CLCN6ENSG00000011021.171762.759201112.683000.6637013.6218012.15440HepG2DNAJC21
CLCN6ENSG00000011021.17856.701501269.45380-0.567305.492103.92510HepG2EFTUD2
CLCN6ENSG00000011021.174435.175102483.155500.8367013.0396011.81820HepG2EIF2S1
CLCN6ENSG00000011021.17966.327301236.13930-0.355302.483401.62250HepG2EIF3D
CLCN6ENSG00000011021.172520.538203374.58000-0.421003.540301.54410HepG2EIF3H
CLCN6ENSG00000011021.173926.746602743.986000.517004.710503.87870HepG2EIF4A3
CLCN6ENSG00000011021.172222.347301750.445000.344305.591504.47220HepG2EIF4G1
CLCN6ENSG00000011021.173078.810701676.787700.876603.038402.18610HepG2EIF4G2
CLCN6ENSG00000011021.171104.653901972.94380-0.8368014.0649012.26350HepG2EWSR1
CLCN6ENSG00000011021.171957.768802577.04360-0.396502.211501.51950HepG2FIP1L1
CLCN6ENSG00000011021.172975.378401211.243501.296508.696706.91520HepG2FTO
CLCN6ENSG00000011021.172026.829302769.15010-0.450204.184703.34680HepG2FXR1
CLCN6ENSG00000011021.173381.178802727.178000.310002.345701.52970HepG2G3BP2
CLCN6ENSG00000011021.172691.193201370.580800.9734014.8487013.48190HepG2GPKOW
CLCN6ENSG00000011021.171284.346501927.68260-0.585808.208906.63710HepG2HDGF
CLCN6ENSG00000011021.172110.429801123.343900.9096017.4261016.03170HepG2HNRNPA1
CLCN6ENSG00000011021.171346.514801630.56730-0.276102.898101.94460HepG2HNRNPA2B1
CLCN6ENSG00000011021.171692.527201249.545300.437704.346103.49130HepG2HNRNPC
CLCN6ENSG00000011021.171938.920101186.922400.7079017.5094015.90570HepG2HNRNPF
CLCN6ENSG00000011021.171953.712602601.54110-0.413104.065003.23210HepG2HNRNPK
CLCN6ENSG00000011021.173753.531401307.975801.5208016.1922014.84480HepG2HNRNPLL
CLCN6ENSG00000011021.172040.374701168.775900.8037012.8259011.38390HepG2IGF2BP1
CLCN6ENSG00000011021.174712.455102610.700700.8519013.9346012.55020HepG2IGF2BP2
CLCN6ENSG00000011021.171912.538301304.843900.551502.787901.46110HepG2ILF3
CLCN6ENSG00000011021.172518.411601944.141100.373302.320301.56440HepG2LARP4
CLCN6ENSG00000011021.17679.821101151.17790-0.759909.646707.65260HepG2LARP7
CLCN6ENSG00000011021.173462.888202770.119500.321902.396401.78450HepG2MAGOH
CLCN6ENSG00000011021.17723.10580974.95670-0.431103.061301.36850HepG2MARK2
CLCN6ENSG00000011021.171950.808102785.52860-0.513904.585203.79070HepG2MATR3
CLCN6ENSG00000011021.17816.366801293.74050-0.664304.693703.34440HepG2METAP2
CLCN6ENSG00000011021.171502.516102084.73260-0.472503.619202.69440HepG2MSI2
CLCN6ENSG00000011021.172382.391601334.093100.836507.582305.94900HepG2MTPAP
CLCN6ENSG00000011021.172667.444701750.786700.607408.008105.98610HepG2NAA15
CLCN6ENSG00000011021.172469.472101159.813101.0902022.6374020.79850HepG2NSUN2
CLCN6ENSG00000011021.172209.951301223.520200.852906.295104.91930HepG2PABPC1
CLCN6ENSG00000011021.173394.210902538.706200.418903.601802.78500HepG2PABPC4
CLCN6ENSG00000011021.17809.011501022.25410-0.337502.864901.61220HepG2PKM
CLCN6ENSG00000011021.171455.586901107.118300.394703.883203.02450HepG2PPIL4
CLCN6ENSG00000011021.173610.045301601.475301.1725056.3489053.86800HepG2PRPF4
CLCN6ENSG00000011021.173249.438502673.390300.281404.154603.51470HepG2PTBP1
CLCN6ENSG00000011021.171287.378201782.81050-0.469709.857508.88440HepG2PUM1
CLCN6ENSG00000011021.174182.636102056.790201.0239050.5031048.55800HepG2PUS1
CLCN6ENSG00000011021.174703.155502895.139600.6999017.1727015.80790HepG2QKI
CLCN6ENSG00000011021.171708.458102971.78480-0.7986018.5070016.62760HepG2RBM15
CLCN6ENSG00000011021.173116.853002627.603900.246202.235301.62330HepG2RBM25
CLCN6ENSG00000011021.171561.167001127.205900.469803.801102.55300HepG2RCC2
CLCN6ENSG00000011021.171679.765802975.14560-0.8247027.4517026.11070HepG2NELFE
CLCN6ENSG00000011021.171639.115402771.09100-0.7575023.5585022.06880HepG2RECQL
CLCN6ENSG00000011021.172725.809501292.377601.0766011.682709.88020HepG2RPS10
CLCN6ENSG00000011021.172021.803101344.924200.588004.391203.38270HepG2RPS3A
CLCN6ENSG00000011021.17995.770001306.81120-0.392202.899601.79650HepG2RPS5
CLCN6ENSG00000011021.172982.311304352.30760-0.545302.964402.26550HepG2SF3A3
CLCN6ENSG00000011021.171666.222901294.603900.364002.446701.78110HepG2SF3B1
CLCN6ENSG00000011021.171981.915602783.16920-0.4898010.498509.46050HepG2SF3B4
CLCN6ENSG00000011021.172692.248401610.395000.7413021.8411020.24230HepG2SLBP
CLCN6ENSG00000011021.171764.21470940.485400.907402.959101.59290HepG2SNRNP200
CLCN6ENSG00000011021.172089.891301440.485900.536803.328102.46730HepG2SNRNP70
CLCN6ENSG00000011021.171291.231902905.09760-1.1698055.4035053.88910HepG2SRSF1
CLCN6ENSG00000011021.172347.897701658.227400.501605.513404.67300HepG2SRSF5
CLCN6ENSG00000011021.171557.544901166.125200.417506.180005.20580HepG2SRSF7
CLCN6ENSG00000011021.171121.202202363.51320-1.0759044.7144043.03230HepG2SRSF9
CLCN6ENSG00000011021.175182.970801884.762101.45930108.34570106.39020HepG2SSB
CLCN6ENSG00000011021.171623.299802914.52280-0.8443010.994008.71220HepG2SSRP1
CLCN6ENSG00000011021.171813.301901170.322100.631605.301103.73320HepG2STIP1
CLCN6ENSG00000011021.171568.739001885.80420-0.265603.355102.68330HepG2SUCLG1
CLCN6ENSG00000011021.171596.709501248.424000.354902.044901.45060HepG2SUPV3L1
CLCN6ENSG00000011021.172391.916101275.026500.9075016.3636014.85430HepG2TARDBP
CLCN6ENSG00000011021.174548.815702862.695400.668003.116101.98610HepG2TBRG4
CLCN6ENSG00000011021.172990.234502399.322700.317503.606102.65710HepG2TIA1
CLCN6ENSG00000011021.172804.338301206.013501.2173041.0564039.55130HepG2TIAL1
CLCN6ENSG00000011021.171850.211101216.927000.604306.466605.66950HepG2TRIM56
CLCN6ENSG00000011021.17703.99090982.26550-0.480603.082901.43570HepG2TROVE2
CLCN6ENSG00000011021.171888.106201094.434200.786702.200701.33230HepG2U2AF2
CLCN6ENSG00000011021.174412.033003859.834600.192802.707302.01480HepG2UPF1
CLCN6ENSG00000011021.171758.132201143.039600.621104.350103.07440HepG2UPF2
CLCN6ENSG00000011021.173329.884203967.34630-0.252703.476002.31570HepG2UTP18
CLCN6ENSG00000011021.172564.277603726.51370-0.5393015.3311014.09130HepG2UTP3
CLCN6ENSG00000011021.172105.139901204.714600.805107.488705.68630HepG2XPO5
CLCN6ENSG00000011021.171020.170001446.83080-0.504103.112401.98560HepG2XRCC6
CLCN6ENSG00000011021.171801.191701228.938000.551405.029204.06040HepG2XRN2
CLCN6ENSG00000011021.172219.181101580.460500.4896011.7849010.55960HepG2ZC3H8
CLCN6ENSG00000011021.173114.859504245.07470-0.4466014.8904013.87220HepG2ZNF622
CLCN6ENSG00000011021.171290.416401649.42200-0.354102.832001.59010K562ABCF1
CLCN6ENSG00000011021.171348.481301762.16560-0.386005.502304.74540K562AGGF1
CLCN6ENSG00000011021.172369.854401923.929800.300603.690202.62250K562ATP5C1
CLCN6ENSG00000011021.171669.388702015.05150-0.271503.152001.96550K562CPEB4
CLCN6ENSG00000011021.17747.244801059.67340-0.504003.480701.38540K562YBX3
CLCN6ENSG00000011021.172358.654202863.42310-0.279802.170201.30850K562CELF1
CLCN6ENSG00000011021.171225.499702084.82680-0.7666021.0840019.44330K562DDX47
CLCN6ENSG00000011021.17726.566801043.28890-0.522004.752702.97280K562DNAJC21
CLCN6ENSG00000011021.17912.325901159.01160-0.345302.474401.78750K562EIF2S2
CLCN6ENSG00000011021.17599.21140986.85640-0.719804.270602.99460K562EIF3A
CLCN6ENSG00000011021.171543.522202328.10940-0.592906.659505.22360K562EIF4G2
CLCN6ENSG00000011021.17731.80150966.97540-0.402002.583401.70320K562FTO
CLCN6ENSG00000011021.17938.789801181.66510-0.331902.124501.58170K562FXR1
CLCN6ENSG00000011021.17555.68660875.62840-0.656004.724903.74440K562G3BP2
CLCN6ENSG00000011021.171539.068201053.934500.546206.706505.81710K562HNRNPC
CLCN6ENSG00000011021.17672.714601040.99740-0.629905.926604.05100K562HNRNPK
CLCN6ENSG00000011021.171023.444301607.53010-0.651408.059906.71850K562HSPD1
CLCN6ENSG00000011021.171275.11230940.084700.439703.917402.01780K562LSM11
CLCN6ENSG00000011021.171849.580602481.39670-0.424004.291602.88870K562MSI2
CLCN6ENSG00000011021.171876.842601515.624600.308304.278403.29120K562MTPAP
CLCN6ENSG00000011021.17540.75370757.79040-0.486803.397101.93670K562NONO
CLCN6ENSG00000011021.17893.890101297.03670-0.537004.534303.47190K562PCBP3
CLCN6ENSG00000011021.171514.735802392.25190-0.659307.522005.36060K562PNPT1
CLCN6ENSG00000011021.17668.60620994.91580-0.573404.369803.35980K562POLR2G
CLCN6ENSG00000011021.17975.725101346.04260-0.464204.157103.12510K562PPIG
CLCN6ENSG00000011021.171221.91510944.999900.370703.094002.13120K562PSIP1
CLCN6ENSG00000011021.171995.556402702.50380-0.437504.018502.71060K562PUM1
CLCN6ENSG00000011021.171834.244502647.12240-0.529205.468304.10000K562PUM2
CLCN6ENSG00000011021.17453.62240762.01550-0.748306.469005.20950K562RPS19
CLCN6ENSG00000011021.17516.97610764.88660-0.565103.439801.94530K562RRP9
CLCN6ENSG00000011021.171806.96390997.794400.856702.822201.60410K562SF1
CLCN6ENSG00000011021.171105.643001661.71730-0.5878010.383708.87990K562SF3A3
CLCN6ENSG00000011021.17790.951801068.53810-0.434003.474202.04010K562SLBP
CLCN6ENSG00000011021.17719.380101043.57210-0.536705.802304.78680K562SRSF1
CLCN6ENSG00000011021.171209.153501555.68430-0.363602.893501.50040K562SSRP1
CLCN6ENSG00000011021.17783.44850997.86500-0.349002.909002.06540K562SYNCRIP
CLCN6ENSG00000011021.171149.37680908.910100.338502.133501.32310K562TIAL1
CLCN6ENSG00000011021.171285.00730965.799400.411903.548002.45210K562TRIM56
CLCN6ENSG00000011021.171309.528901905.63150-0.541204.561803.01110K562UTP3
CLCN6ENSG00000011021.171201.435601588.78730-0.403206.644205.38600K562WDR43
CLCN6ENSG00000011021.171339.508601963.80850-0.552004.607603.45140K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CLCN6 is not available on ENCORE database.





17 RBPs can affect the splicing of CLCN6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.399000.000030.00106excludedHepG2U2AF1
SECLCN6ENSG00000011021.17chr1+1189323211893440118892521188937911893571118936950.175000.000030.00211includedK562AKAP8L
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.493000.000000.00146excludedK562PCBP1
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.207000.001340.03413excludedHepG2HNRNPK
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.260000.000970.07252excludedHepG2TBRG4
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889356-0.505000.000000.00009excludedHepG2U2AF2
SECLCN6ENSG00000011021.17chr1+118862121188627111884542118846101188714511887278-0.123000.007150.06222excludedK562AQR
SECLCN6ENSG00000011021.17chr1+118862121188627111884542118846101188714511887278-0.171000.003840.05068excludedK562PUS1
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.313000.000000.00007excludedHepG2NCBP2
SECLCN6ENSG00000011021.17chr1+1188851411888681118881621188827611889252118893790.212000.000000.00018includedHepG2PTBP1
SECLCN6ENSG00000011021.17chr1+1189017811890327118892521188937911893571118936950.068000.001100.06359includedHepG2FTO
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.315000.000010.00078excludedHepG2SF3A3
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.465000.000000.00037excludedHepG2TIAL1
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.571000.000000.00000excludedHepG2PCBP1
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.210000.001910.07578excludedHepG2SF3B4
SECLCN6ENSG00000011021.17chr1+1189323211893440118892521188937911893571118936950.286000.000010.00077includedK562AGGF1
SECLCN6ENSG00000011021.17chr1+118885141188868111888162118882761188925211889379-0.405000.000010.00197excludedHepG2SRSF9
A3SSCLCN6ENSG00000011021.17chr1+118973991189755611897433118975561189705511897213-0.598000.000000.00000shorterHepG2U2AF2
A3SSCLCN6ENSG00000011021.17chr1+118973991189755611897433118975561189705511897213-0.159000.000350.07393shorterHepG2NCBP2
A3SSCLCN6ENSG00000011021.17chr1+1187952611879611118795441187961111876671118767370.104000.001010.00703longerK562AQR
A3SSCLCN6ENSG00000011021.17chr1+1186716011867247118671871186724711866319118664060.206000.000000.00000longerK562AQR
A3SSCLCN6ENSG00000011021.17chr1+1189424411894365118942921189436511893914118940870.084000.000680.00491longerK562AQR
A3SSCLCN6ENSG00000011021.17chr1+118973991189755611897433118975561189705511897213-0.362000.000230.00183shorterK562AQR
A3SSCLCN6ENSG00000011021.17chr1+118973991189755611897433118975561189705511897213-0.424000.000000.00000shorterHepG2U2AF1
A5SSCLCN6ENSG00000011021.17chr1+1188275111882991118827511188285811883763118838900.140000.005640.07980longerK562AQR
A5SSCLCN6ENSG00000011021.17chr1+1188714511887344118871451188727811888162118882750.108000.000190.00450longerK562AQR
A5SSCLCN6ENSG00000011021.17chr1+118936611189384811893661118936951189393311894087-0.075000.000060.00374shorterHepG2U2AF2
A5SSCLCN6ENSG00000011021.17chr1+1188275111882991118827511188285811883763118838900.163000.000030.00979longerHepG2NCBP2
A5SSCLCN6ENSG00000011021.17chr1+1188714511887344118871451188727811888162118882750.090000.000700.05345longerHepG2SF3A3
A5SSCLCN6ENSG00000011021.17chr1+118936611189384811893661118936951189393311894087-0.072000.000260.04843shorterHepG2HNRNPUL1
A5SSCLCN6ENSG00000011021.17chr1+1189608711896240118960871189621011897055118972130.054000.000190.02118longerHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CLCN6 is not avaliable on ENCORE database.