PKM

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PKM	ENSG00000067225.17	1029.53	1036.37	1032.95	ENCSR000AEF
HepG2	PKM	ENSG00000067225.17	856.85	659.54	758.19	ENCSR985KAT
K562	PKM	ENSG00000067225.17	366.08	350.73	358.40	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	PKM-BGKLV21-K562	ENCSR978CSQ	PKM	K562	Released		ENCSR438MDN	shRNA	KD% = 55.1,45.7
knockdown followed by RNA-seq	PKM-BGHLV16-HepG2	ENCSR656DQV	PKM	HepG2	Released		ENCSR689PHN	shRNA	KD% = 43.0,50.4

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
PKM	ENCAB905ZIN	A303-660A	1		Released, ENCODE3	Released, ENCODE3	BGHLV16-39, Released, ENCODE3	BGKLV21-41, Released, ENCODE3
PKM		4053S	6			Submitted, ENCORE2	BGHcLV43-41, Submitted, ENCORE2	BGKcLV42-65, Submitted, ENCORE2

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
PKM	K562	shRNA			BGKLV19-41,BGKLV19-42	BGKLV19-1,BGKLV19-2		NotSatisfied	ENCODE3
PKM	K562	shRNA	ENCSR978CSQ	ENCSR438MDN	PKM2_BGKLV21-41B,PKM2_BGKLV21-42B	NT_BGKLV21-1B,NT_BGKLV21-2B	55.1,45.7	Released	ENCODE3
PKM	HepG2	shRNA	ENCSR656DQV	ENCSR689PHN	PKM2_BGHLV16_39,PKM2_BGHLV16_40	NT_BGHLV16_1,NT_BGHLV16_2	43.0,50.4	Released	ENCODE3
PKM	K562	CRISPR			PKM-BGKcLV42-65,PKM-BGKcLV42-66	NT-BGKcLV42-1,NT-BGKcLV42-2	98.6,94.7	Sequenced	ENCORE2
PKM	HepG2	CRISPR			PKM-BGHcLV43-41,PKM-BGHcLV43-42	NT-BGHcLV43-1,NT-BGHcLV43-2	83.5,91.8	Sequenced	ENCORE2

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PKM is not avaliable on ENCORE database.

Proteins bound to RNA

PKM RNA is bound by 57 proteins.

eCLIP assay for PKM is not avaliable on ENCORE database.

57 proteins are bound to PKM RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	72491462	72491540	-	3'-UTR,intron-Distal	4.31222	24.72260	HepG2	PCBP1
chr15	72500960	72500976	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.65505	26.34338	HepG2	G3BP1
chr15	72502108	72502168	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98551	30.64637	HepG2	G3BP1
chr15	72499113	72499175	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.53402	40.62569	K562	RPS3
chr15	72502687	72502720	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.60729	25.33929	HepG2	RPS3
chr15	72492954	72492998	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37729	3.65584	HepG2	SND1
chr15	72491915	72491976	-	3'-UTR,intron-Distal,intron-Proximal	3.46867	36.99827	HepG2	PCBP2
chr15	72491686	72491764	-	3'-UTR,intron-Distal	3.56193	19.53221	K562	UPF1
chr15	72492900	72492951	-	3'-UTR,CDS,intron-Distal	4.35379	46.20557	K562	RPS3
chr15	72499458	72499509	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48089	11.43193	HepG2	PRPF8
chr15	72499583	72499659	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90103	7.17852	HepG2	AQR
chr15	72492004	72492065	-	3'-UTR,CDS,intron-Distal	3.04568	9.31359	K562	SND1
chr15	72492815	72492906	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.34236	14.22252	HepG2	PPIG
chr15	72491535	72491559	-	3'-UTR,intron-Distal	5.13222	32.94769	HepG2	SUB1
chr15	72491450	72491463	-	3'-UTR,intron-Distal	4.11662	24.42709	HepG2	PCBP2
chr15	72491863	72491913	-	3'-UTR,intron-Distal,intron-Proximal	5.31064	47.49911	HepG2	SUB1
chr15	72502169	72502222	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.47134	5.13777	HepG2	PRPF8
chr15	72492837	72492899	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.17632	45.00508	HepG2	RPS3
chr15	72492957	72492996	-	3'-UTR,CDS,intron-Distal	3.64772	21.95967	HepG2	G3BP1
chr15	72499440	72499471	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.24731	4.80460	HepG2	AQR
chr15	72499467	72499480	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.71092	28.80338	HepG2	LIN28B
chr15	72500898	72500965	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.36558	7.39618	HepG2	PRPF8
chr15	72491942	72492006	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.36211	28.57064	HepG2	RPS3
chr15	72492016	72492068	-	3'-UTR,CDS,intron-Distal	4.69257	36.61092	K562	RPS3
chr15	72499126	72499156	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.76192	36.69083	HepG2	RPS3
chr15	72492952	72493026	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.21958	20.56400	K562	BUD13
chr15	72491456	72491528	-	3'-UTR,intron-Distal	3.16725	18.79871	HepG2	G3BP1
chr15	72491401	72491461	-	3'-UTR,intron-Distal,intron-Proximal	4.42575	31.62698	K562	PCBP1
chr15	72492992	72493067	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.63273	9.24583	HepG2	AQR
chr15	72492899	72492963	-	3'-UTR,CDS,intron-Distal	4.10563	54.81245	HepG2	RPS3
chr15	72499128	72499158	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.36291	29.60795	HepG2	G3BP1
chr15	72494922	72494962	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.00523	16.74746	K562	RPS3
chr15	72499168	72499213	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.26375	39.40165	HepG2	RPS3
chr15	72499529	72499618	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.82989	77.54488	HepG2	G3BP1
chr15	72500959	72500979	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.62149	11.46801	K562	DDX24
chr15	72499210	72499221	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.08760	5.80788	K562	SND1
chr15	72499540	72499617	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.63493	47.18513	HepG2	RPS3
chr15	72501165	72501233	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.10418	19.29291	K562	DDX24
chr15	72499486	72499518	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.46399	28.28266	HepG2	GRWD1
chr15	72491392	72491449	-	3'-UTR,intron-Distal,intron-Proximal	3.64363	34.10856	K562	IGF2BP2
chr15	72502691	72502709	-	3'-UTR,CDS,intron-Distal	3.38504	19.15346	HepG2	G3BP1
chr15	72491834	72491863	-	3'-UTR,intron-Distal,intron-Proximal	4.95355	34.15996	HepG2	SUB1
chr15	72502052	72502152	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.42367	24.87484	HepG2	RPS3
chr15	72492960	72492999	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67450	6.44730	K562	PCBP1
chr15	72501200	72501235	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.55588	29.12583	HepG2	RPS3
chr15	72499500	72499593	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.16995	11.08596	K562	ZNF800
chr15	72492816	72492825	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.25267	8.05636	HepG2	G3BP1
chr15	72492022	72492063	-	3'-UTR,CDS,intron-Distal	4.21523	8.25782	K562	LARP4
chr15	72491562	72491583	-	3'-UTR,intron-Distal	3.69697	13.48137	K562	YBX3
chr15	72492814	72492827	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.60161	11.73818	HepG2	RPS3
chr15	72501173	72501206	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.29913	21.57602	HepG2	G3BP1
chr15	72491917	72491949	-	3'-UTR,intron-Distal,intron-Proximal	3.24060	25.79323	K562	PABPC4
chr15	72501003	72501083	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.15361	4.45218	HepG2	ZNF800
chr15	72494925	72494961	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.81810	33.07153	HepG2	RPS3
chr15	72492071	72492117	-	3'-UTR,CDS,intron-Distal	3.43136	10.14158	HepG2	BUD13
chr15	72491570	72491670	-	3'-UTR,intron-Distal	3.99907	66.58263	K562	PABPC4
chr15	72502165	72502201	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22846	22.06255	HepG2	RPS3
chr15	72491728	72491752	-	3'-UTR,intron-Distal	4.40776	10.32152	HepG2	UPF1
chr15	72499504	72499619	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.26946	17.01759	K562	PUM1
chr15	72494864	72494875	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.17635	19.95570	HepG2	RPS3
chr15	72499101	72499128	-	3'-UTR,CDS,intron-Distal	3.90504	27.05614	HepG2	G3BP1
chr15	72502168	72502200	-	3'-UTR,CDS,intron-Distal	3.62606	25.11559	HepG2	G3BP1
chr15	72491707	72491760	-	3'-UTR,intron-Distal	4.19979	28.12879	HepG2	SUB1
chr15	72491786	72491838	-	3'-UTR,intron-Distal,intron-Proximal	4.17833	8.05953	HepG2	PCBP1
chr15	72499488	72499524	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.55283	55.96533	HepG2	LIN28B
chr15	72491559	72491582	-	3'-UTR,intron-Distal	5.41383	33.74029	HepG2	SUB1
chr15	72499480	72499488	-	3'-UTR,CDS,intron-Distal	4.68755	50.33558	HepG2	LIN28B
chr15	72499466	72499504	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.87891	6.95618	K562	PUM1
chr15	72501110	72501173	-	3'-UTR,CDS,intron-Distal	4.32111	47.55801	HepG2	G3BP1
chr15	72501085	72501235	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.08788	7.81302	HepG2	FTO
chr15	72502171	72502242	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.45339	11.97662	K562	AQR
chr15	72502051	72502133	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.19953	4.51101	HepG2	FTO
chr15	72491776	72491833	-	3'-UTR,intron-Distal,intron-Proximal	3.20101	22.65966	HepG2	G3BP1
chr15	72492963	72492998	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.39664	23.25379	HepG2	RPS3
chr15	72501223	72501233	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.12727	19.55522	K562	ZNF622
chr15	72499162	72499168	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.78952	28.03292	K562	LIN28B
chr15	72499485	72499519	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.10578	12.70051	HepG2	PPIG
chr15	72491794	72491827	-	3'-UTR,intron-Distal	3.14408	3.04831	K562	RBM15
chr15	72502008	72502040	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.74897	8.29535	HepG2	SDAD1
chr15	72499175	72499221	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.96882	23.82658	K562	RPS3
chr15	72491870	72492000	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.91608	37.32913	HepG2	PCBP1
chr15	72491854	72491893	-	3'-UTR,intron-Distal,intron-Proximal	3.34976	49.43582	K562	PABPC4
chr15	72491453	72491489	-	3'-UTR,intron-Distal	3.88978	19.69860	HepG2	LARP4
chr15	72491426	72491454	-	3'-UTR,intron-Distal,intron-Proximal	3.41502	50.55819	K562	PABPC4
chr15	72499562	72499620	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28104	12.04609	HepG2	SDAD1
chr15	72499213	72499221	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.09849	15.23109	HepG2	RPS3
chr15	72501976	72502027	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.93374	4.45914	HepG2	PRPF8
chr15	72502053	72502141	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.50230	26.44750	K562	RPS3
chr15	72494817	72494867	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.86725	16.06772	K562	RPS3
chr15	72501095	72501169	-	3'-UTR,CDS,intron-Distal	4.48339	47.83253	K562	RPS3
chr15	72491601	72491686	-	3'-UTR,intron-Distal	3.94215	25.56498	K562	UPF1
chr15	72491408	72491462	-	3'-UTR,intron-Distal,intron-Proximal	4.37963	21.93663	HepG2	PCBP1
chr15	72492935	72492994	-	3'-UTR,CDS,intron-Distal	3.78040	7.52757	HepG2	PCBP1
chr15	72491893	72491917	-	3'-UTR,intron-Distal,intron-Proximal	3.47128	48.07272	K562	PABPC4
chr15	72499167	72499222	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.46387	6.31407	K562	PUM1
chr15	72500960	72501055	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.14229	20.19302	K562	RPS3
chr15	72501057	72501084	-	3'-UTR,CDS,intron-Distal	3.39884	10.25933	K562	LIN28B
chr15	72491442	72491450	-	3'-UTR,intron-Distal,intron-Proximal	4.33895	34.64411	HepG2	PCBP2
chr15	72492013	72492045	-	3'-UTR,CDS,intron-Distal	4.75050	7.59520	K562	PCBP1
chr15	72502012	72502054	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.60547	34.79558	K562	ZNF622
chr15	72499467	72499493	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.63860	400.00000	K562	LIN28B
chr15	72501091	72501110	-	3'-UTR,CDS,intron-Distal	4.67130	26.11595	HepG2	G3BP1
chr15	72492071	72492097	-	3'-UTR,CDS,intron-Distal	4.60962	16.09577	HepG2	RPS3
chr15	72499025	72499074	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.86736	15.12562	HepG2	PRPF8
chr15	72501159	72501200	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.99010	44.41484	HepG2	RPS3
chr15	72499077	72499101	-	3'-UTR,CDS,intron-Distal	4.02526	23.86896	HepG2	G3BP1
chr15	72491701	72491728	-	3'-UTR,intron-Distal	4.43982	10.32152	HepG2	UPF1
chr15	72502170	72502200	-	3'-UTR,CDS,intron-Distal	4.30683	12.44459	K562	RPS3
chr15	72491398	72491453	-	3'-UTR,intron-Distal,intron-Proximal	3.33510	3.47356	HepG2	HNRNPK
chr15	72491781	72491839	-	3'-UTR,intron-Distal,intron-Proximal	3.23255	17.10924	HepG2	DDX55
chr15	72491843	72491948	-	3'-UTR,intron-Distal,intron-Proximal	4.23372	30.28814	HepG2	UPF1
chr15	72491399	72491456	-	3'-UTR,intron-Distal,intron-Proximal	5.23030	33.31877	HepG2	G3BP1
chr15	72492012	72492071	-	3'-UTR,CDS,intron-Distal	4.56529	36.97123	HepG2	RPS3
chr15	72499195	72499275	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.36442	11.94838	HepG2	AQR
chr15	72500984	72501092	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.47368	30.79412	HepG2	RPS3
chr15	72499539	72499619	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.70707	28.46792	K562	DDX24
chr15	72501169	72501232	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.91075	26.10232	K562	RPS3
chr15	72491461	72491557	-	3'-UTR,intron-Distal	4.09208	17.85468	K562	PCBP1
chr15	72499493	72499544	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.23818	400.00000	K562	LIN28B
chr15	72501195	72501232	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.39337	20.27996	HepG2	PPIG
chr15	72502011	72502064	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.09862	6.13500	K562	ZNF800
chr15	72499195	72499252	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.14986	9.11045	K562	AQR
chr15	72492027	72492052	-	3'-UTR,CDS,intron-Distal	3.54346	11.10267	K562	PABPC4
chr15	72491391	72491459	-	3'-UTR,intron-Distal,intron-Proximal	5.90602	14.28118	HepG2	IGF2BP3
chr15	72499124	72499156	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.43837	47.72527	K562	LIN28B
chr15	72491896	72492009	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.99248	56.43462	K562	PCBP1
chr15	72492840	72492891	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.37324	26.05251	K562	RPS3
chr15	72492897	72492960	-	3'-UTR,CDS,intron-Distal	4.07654	12.36003	K562	PCBP1
chr15	72499172	72499210	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.20479	42.13177	HepG2	G3BP1
chr15	72492892	72492954	-	3'-UTR,CDS,intron-Distal	3.57510	4.57337	HepG2	SND1
chr15	72494874	72494922	-	3'-UTR,CDS,intron-Distal	3.82907	31.34429	HepG2	G3BP1
chr15	72502687	72502691	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.36626	16.17265	HepG2	G3BP1
chr15	72491833	72491902	-	3'-UTR,intron-Distal,intron-Proximal	3.78862	4.75336	K562	PUM1
chr15	72502010	72502038	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67283	16.74153	HepG2	PPIG
chr15	72502012	72502053	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.04032	18.87844	K562	RPS3
chr15	72499106	72499172	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.10817	18.68990	K562	ZNF622
chr15	72499129	72499174	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.64474	22.94831	HepG2	LIN28B
chr15	72499547	72499618	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.49124	22.09949	K562	RPS3
chr15	72502687	72502707	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.59957	16.27442	K562	RPS3
chr15	72492838	72492899	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28176	16.50308	HepG2	G3BP1
chr15	72499491	72499521	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.65748	41.26247	HepG2	G3BP1
chr15	72502022	72502052	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.16680	24.99259	HepG2	G3BP1
chr15	72492010	72492068	-	3'-UTR,CDS,intron-Distal	3.41033	23.12010	HepG2	G3BP1
chr15	72492955	72493064	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.26801	49.06114	K562	SF3B4
chr15	72492978	72493030	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.10331	11.58353	K562	AQR
chr15	72499156	72499162	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.05899	28.13393	K562	LIN28B
chr15	72491779	72491843	-	3'-UTR,intron-Distal,intron-Proximal	7.12284	39.57622	HepG2	UPF1
chr15	72492814	72492840	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.41804	33.61714	K562	RPS3
chr15	72491698	72491761	-	3'-UTR,intron-Distal	3.64960	16.56019	HepG2	G3BP1
chr15	72502720	72502798	-	3'-UTR,CDS,intron-Distal	4.05114	34.60529	HepG2	RPS3
chr15	72501061	72501165	-	3'-UTR,CDS,intron-Distal	3.81097	20.29766	K562	DDX24
chr15	72501225	72501232	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.26346	23.61366	HepG2	G3BP1
chr15	72502012	72502052	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28191	20.94363	HepG2	RPS3
chr15	72494750	72494813	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.43646	18.97334	HepG2	PRPF8
chr15	72491615	72491707	-	3'-UTR,intron-Distal	3.85447	16.46755	K562	NOLC1
chr15	72491394	72491442	-	3'-UTR,intron-Distal,intron-Proximal	4.82948	43.42398	HepG2	PCBP2
chr15	72502709	72502776	-	3'-UTR,CDS,intron-Distal	3.61749	36.47774	HepG2	G3BP1
chr15	72501172	72501231	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.00093	4.73140	K562	FMR1
chr15	72494922	72494961	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.70983	32.90066	HepG2	G3BP1
chr15	72500961	72500982	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.58110	4.30740	K562	PUM1
chr15	72499068	72499077	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.12409	19.19745	HepG2	G3BP1
chr15	72491587	72491696	-	3'-UTR,intron-Distal	5.27653	40.24089	HepG2	UPF1
chr15	72500979	72501091	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.76209	400.00000	HepG2	G3BP1
chr15	72494751	72494797	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.47805	8.16909	HepG2	AQR
chr15	72511395	72511459	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.01002	7.18154	K562	GEMIN5
chr15	72494938	72495031	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.40953	34.03751	K562	SF3B4
chr15	72491507	72491587	-	3'-UTR,intron-Distal	4.63680	20.85605	HepG2	UPF1
chr15	72500926	72500983	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.27278	6.78984	HepG2	AQR
chr15	72500960	72500968	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.16731	15.17919	K562	ZNF622
chr15	72502021	72502043	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.21376	7.32816	HepG2	ZNF800
chr15	72491398	72491453	-	3'-UTR,intron-Distal,intron-Proximal	4.79329	28.84980	HepG2	LARP4
chr15	72492021	72492057	-	3'-UTR,CDS,intron-Distal	3.49125	4.68928	K562	RBM15
chr15	72499156	72499168	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.62589	23.12237	HepG2	RPS3
chr15	72499466	72499485	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.51429	16.66400	HepG2	PPIG
chr15	72492077	72492098	-	3'-UTR,CDS,intron-Distal	5.72247	18.07369	K562	RPS3
chr15	72499110	72499124	-	3'-UTR,CDS,intron-Distal	4.70888	28.56563	K562	LIN28B
chr15	72501206	72501225	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98519	29.88051	HepG2	G3BP1
chr15	72500997	72501082	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.45827	9.17734	HepG2	NOLC1
chr15	72491393	72491451	-	3'-UTR,intron-Distal,intron-Proximal	3.36323	10.93757	HepG2	IGF2BP1
chr15	72491789	72491832	-	3'-UTR,intron-Distal,intron-Proximal	4.42124	16.02177	K562	PABPC4
chr15	72499210	72499222	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.84441	28.39086	HepG2	G3BP1
chr15	72492067	72492096	-	3'-UTR,CDS,intron-Distal	3.65995	4.51003	HepG2	PPIG
chr15	72499068	72499079	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.72033	28.16191	HepG2	RPS3
chr15	72491799	72491829	-	3'-UTR,intron-Distal	5.06998	18.60507	HepG2	SUB1
chr15	72499466	72499518	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48396	24.27868	K562	RPS3
chr15	72491621	72491697	-	3'-UTR,intron-Distal	7.46224	95.11608	HepG2	SUB1
chr15	72491398	72491426	-	3'-UTR,intron-Distal,intron-Proximal	3.89046	65.48425	K562	PABPC4
chr15	72499217	72499221	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.92422	9.61407	K562	LIN28B
chr15	72502170	72502203	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.04758	10.04063	K562	DDX24
chr15	72501997	72502017	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.35738	13.75318	K562	AQR
chr15	72502013	72502022	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.14838	20.00394	HepG2	G3BP1
chr15	72491603	72491696	-	3'-UTR,intron-Distal	4.17375	13.99519	HepG2	AKAP1
chr15	72511371	72511486	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.61534	8.96851	HepG2	AQR
chr15	72494833	72494867	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.66150	7.21479	K562	UCHL5
chr15	72494815	72494864	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.91579	43.80883	HepG2	RPS3
chr15	72491406	72491458	-	3'-UTR,intron-Distal,intron-Proximal	3.25265	10.90368	HepG2	UPF1
chr15	72499466	72499491	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.24853	42.58700	HepG2	G3BP1
chr15	72499067	72499113	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.94076	45.71788	K562	RPS3
chr15	72499467	72499521	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.21433	31.52818	HepG2	RPS3
chr15	72501111	72501233	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.82072	11.03457	K562	PUM1
chr15	72491602	72491686	-	3'-UTR,intron-Distal	4.04468	32.67048	HepG2	G3BP1
chr15	72491698	72491760	-	3'-UTR,intron-Distal	4.18324	4.80637	K562	ZC3H11A
chr15	72499518	72499540	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.20137	15.95762	HepG2	GRWD1
chr15	72491453	72491515	-	3'-UTR,intron-Distal	3.01092	29.07777	K562	IGF2BP2
chr15	72491463	72491546	-	3'-UTR,intron-Distal	4.02049	61.61831	HepG2	PCBP2
chr15	72491458	72491507	-	3'-UTR,intron-Distal	3.26244	11.56943	HepG2	UPF1
chr15	72501045	72501084	-	3'-UTR,CDS,intron-Distal	3.23421	3.49427	K562	RBM15
chr15	72494875	72494919	-	3'-UTR,CDS,intron-Distal	3.67450	39.41896	HepG2	RPS3
chr15	72501092	72501159	-	3'-UTR,CDS,intron-Distal	4.57303	67.39617	HepG2	RPS3
chr15	72499110	72499126	-	3'-UTR,CDS,intron-Distal	5.10278	31.45628	HepG2	RPS3
chr15	72499079	72499110	-	3'-UTR,CDS,intron-Distal	4.04609	39.84875	HepG2	RPS3
chr15	72521928	72521993	-	5'-UTR,intron-Distal	3.36571	5.17784	HepG2	SFPQ
chr15	72521947	72522009	-	5'-UTR,intron-Distal	4.62389	3.57264	HepG2	GTF2F1
chr15	72523503	72523542	-	5'-UTR,intron-Distal,intron-Proximal	3.05741	4.52821	K562	DDX3X
chr15	72521943	72522007	-	5'-UTR,intron-Distal	4.60622	6.08649	K562	CSTF2T
chr15	72521947	72522008	-	5'-UTR,intron-Distal	3.17487	6.07372	HepG2	CSTF2T
chr15	72523215	72523255	-	5'-UTR,intron-Distal	4.20169	6.20526	HepG2	DDX59
chr15	72523455	72523489	-	5'-UTR,intron-Distal,intron-Proximal	3.94742	6.05689	K562	GEMIN5
chr15	72522059	72522169	-	5'-UTR,intron-Distal,intron-Proximal	3.02512	3.54578	HepG2	SFPQ
chr15	72523418	72523476	-	5'-UTR,intron-Distal,intron-Proximal	3.97497	10.42788	HepG2	AQR
chr15	72520942	72521047	-	5'-UTR,intron-Distal,intron-Proximal	5.25698	9.29051	K562	NONO
chr15	72521944	72522038	-	5'-UTR,intron-Distal	3.62071	6.41594	HepG2	FUS
chr15	72520983	72521048	-	5'-UTR,intron-Distal,intron-Proximal	4.34206	5.22299	HepG2	SFPQ
chr15	72523455	72523503	-	5'-UTR,intron-Distal,intron-Proximal	3.49477	29.31759	K562	DDX3X
chr15	72502775	72502866	-	CDS,intron-Distal,intron-Proximal	5.41187	20.55249	HepG2	AQR
chr15	72511283	72511301	-	CDS,intron-Distal,intron-Proximal	3.13129	11.65989	K562	IGF2BP2
chr15	72502776	72502796	-	CDS,intron-Distal	3.04668	13.31390	HepG2	G3BP1
chr15	72502784	72502819	-	CDS,intron-Distal	3.17704	6.50573	K562	ZNF800
chr15	72502814	72502820	-	CDS,intron-Distal,intron-Proximal	3.63916	7.53614	K562	TARDBP
chr15	72511282	72511299	-	CDS,intron-Distal,intron-Proximal	3.81430	10.55113	HepG2	IGF2BP1
chr15	72509744	72509800	-	CDS,intron-Distal,intron-Proximal	3.15884	5.87562	HepG2	PRPF4
chr15	72502801	72502839	-	CDS,intron-Distal,intron-Proximal	3.45932	9.22568	K562	AQR
chr15	72502810	72502814	-	CDS,intron-Distal	3.62353	7.53614	K562	TARDBP
chr15	72511274	72511298	-	CDS,intron-Distal,intron-Proximal	3.75627	10.84321	HepG2	AQR
chr15	72511284	72511370	-	CDS,intron-Distal,intron-Proximal	3.79783	50.80244	HepG2	RPS3
chr15	72509794	72509873	-	CDS,intron-Distal,intron-Proximal	3.21504	9.56798	HepG2	AQR
chr15	72509815	72509842	-	CDS,intron-Distal,intron-Proximal	3.79132	16.93126	HepG2	RPS3
chr15	72502784	72502820	-	CDS,intron-Distal,intron-Proximal	3.69358	14.91761	K562	RPS3
chr15	72509748	72509796	-	CDS,intron-Distal,intron-Proximal	3.80066	35.79765	HepG2	G3BP1
chr15	72509702	72509751	-	CDS,intron-Distal,intron-Proximal	4.00536	11.13470	HepG2	PRPF8
chr15	72511303	72511339	-	CDS,intron-Distal,intron-Proximal	3.02480	24.67221	K562	YBX3
chr15	72511223	72511301	-	CDS,intron-Distal,intron-Proximal	3.87455	9.77953	HepG2	PRPF8
chr15	72511284	72511286	-	CDS,intron-Distal,intron-Proximal	3.14461	14.55098	K562	YBX3
chr15	72509749	72509782	-	CDS,intron-Distal,intron-Proximal	3.25479	12.78042	HepG2	RPS3
chr15	72509712	72509794	-	CDS,intron-Distal,intron-Proximal	3.02042	10.66222	HepG2	AQR
chr15	72502796	72502819	-	CDS,intron-Distal	3.77021	26.74904	HepG2	G3BP1
chr15	72511284	72511350	-	CDS,intron-Distal,intron-Proximal	3.21902	31.81539	HepG2	G3BP1
chr15	72511370	72511428	-	CDS,intron-Distal	3.55816	23.91257	HepG2	RPS3
chr15	72495517	72495584	-	CDS,intron-Distal,intron-Proximal	5.52585	32.16081	HepG2	PCBP2
chr15	72509791	72509842	-	CDS,intron-Distal,intron-Proximal	3.12488	10.53904	K562	IGF2BP1
chr15	72509742	72509843	-	CDS,intron-Distal,intron-Proximal	3.52520	13.78760	K562	ZNF800
chr15	72495409	72495462	-	CDS,intron-Distal	3.29448	4.13112	K562	SRSF1
chr15	72509747	72509777	-	CDS,intron-Distal,intron-Proximal	3.77238	9.76889	K562	TARDBP
chr15	72502798	72502818	-	CDS,intron-Distal	3.84286	13.00889	HepG2	RPS3
chr15	72495489	72495575	-	CDS,intron-Distal,intron-Proximal	4.68353	21.31739	HepG2	U2AF2
chr15	72509777	72509789	-	CDS,intron-Distal	3.99917	7.43579	K562	TARDBP
chr15	72509735	72509753	-	CDS,intron-Distal,intron-Proximal	4.35596	16.42008	K562	AQR
chr15	72511276	72511288	-	CDS,intron-Distal,intron-Proximal	3.52731	12.24763	K562	AQR
chr15	72509802	72509852	-	CDS,intron-Distal,intron-Proximal	3.50731	4.54206	HepG2	PRPF8
chr15	72509834	72509841	-	CDS,intron-Distal,intron-Proximal	3.82295	15.29014	HepG2	G3BP1
chr15	72509796	72509834	-	CDS,intron-Distal,intron-Proximal	4.01169	27.14634	HepG2	G3BP1
chr15	72494714	72494787	-	intron-Distal,intron-Proximal	3.63440	8.17399	HepG2	RBM22
chr15	72495132	72495179	-	intron-Distal	3.80351	3.25678	HepG2	SF3B4
chr15	72493203	72493302	-	intron-Distal	3.52794	10.61724	HepG2	PRPF4
chr15	72494966	72495031	-	intron-Distal,intron-Proximal	3.03027	3.79798	HepG2	BUD13
chr15	72494745	72494785	-	intron-Distal,intron-Proximal	4.77672	5.68247	K562	SF3B4
chr15	72522538	72522581	-	intron-Distal	4.40013	4.23759	K562	NONO
chr15	72522752	72522927	-	intron-Distal	3.58450	9.06898	HepG2	HNRNPK
chr15	72499015	72499060	-	intron-Distal,intron-Proximal	5.35050	23.89805	K562	AQR
chr15	72492768	72492815	-	intron-Distal,intron-Proximal	4.85049	8.11807	HepG2	PRPF8
chr15	72494748	72494754	-	intron-Distal,intron-Proximal	5.03584	4.98250	K562	AQR
chr15	72522803	72522884	-	intron-Distal	4.05971	12.00734	HepG2	DDX59
chr15	72522627	72522681	-	intron-Distal	5.28237	5.96444	HepG2	PCBP2
chr15	72499030	72499069	-	intron-Distal,intron-Proximal	5.63963	11.77419	HepG2	AQR
chr15	72522994	72523060	-	intron-Distal	3.45998	7.65224	HepG2	PTBP1
chr15	72493070	72493130	-	intron-Distal,intron-Proximal	4.09543	24.42669	K562	SF3B4
chr15	72495850	72495916	-	intron-Distal	3.78993	6.26242	K562	RBFOX2
chr15	72502212	72502301	-	intron-Distal,intron-Proximal	4.32098	3.82050	HepG2	SF3B4
chr15	72496226	72496317	-	intron-Distal	4.44078	8.59328	HepG2	QKI
chr15	72523090	72523143	-	intron-Distal	4.07734	3.71735	K562	TIA1
chr15	72498358	72498473	-	intron-Distal	3.85376	5.24375	K562	ZC3H11A
chr15	72494965	72495036	-	intron-Distal,intron-Proximal	4.10588	11.55843	HepG2	SF3A3
chr15	72522624	72522668	-	intron-Distal	3.32439	3.05560	HepG2	SFPQ
chr15	72495271	72495317	-	intron-Distal,intron-Proximal	3.91418	5.86177	HepG2	U2AF2
chr15	72499421	72499458	-	intron-Distal,intron-Proximal	4.67081	13.14214	HepG2	PRPF8
chr15	72499060	72499069	-	intron-Distal,intron-Proximal	4.67206	18.54517	K562	AQR
chr15	72495844	72495898	-	intron-Distal	3.18039	3.24490	HepG2	QKI
chr15	72514626	72514677	-	intron-Distal	3.55238	4.61500	HepG2	HNRNPM
chr15	72511235	72511274	-	intron-Distal,intron-Proximal	4.81938	11.87300	HepG2	AQR
chr15	72496403	72496474	-	intron-Distal	3.40265	5.75957	K562	RBFOX2
chr15	72496142	72496191	-	intron-Distal	3.38679	3.08258	K562	TIA1
chr15	72498980	72499036	-	intron-Distal,intron-Proximal	4.07534	7.29837	HepG2	RBM22
chr15	72493130	72493204	-	intron-Distal	3.50045	18.12075	K562	SF3B4
chr15	72522066	72522126	-	intron-Distal,intron-Proximal	4.28909	5.01722	K562	CSTF2T
chr15	72496435	72496482	-	intron-Distal	4.27520	9.01522	HepG2	RBFOX2
chr15	72493108	72493215	-	intron-Distal	4.47748	5.12925	K562	FUS
chr15	72502627	72502687	-	intron-Distal,intron-Proximal	4.23347	6.50183	HepG2	PRPF8
chr15	72509707	72509735	-	intron-Distal,intron-Proximal	6.49211	16.44435	K562	AQR
chr15	72502558	72502604	-	intron-Distal,intron-Proximal	4.05658	4.14792	HepG2	XPO5
chr15	72502618	72502680	-	intron-Distal,intron-Proximal	5.15468	19.12979	K562	AQR
chr15	72522765	72522855	-	intron-Distal	5.64394	18.27363	HepG2	PCBP2
chr15	72494961	72495045	-	intron-Distal,intron-Proximal	4.52843	8.29703	HepG2	AQR
chr15	72495884	72495945	-	intron-Distal	4.65867	19.08450	HepG2	RBFOX2
chr15	72522074	72522118	-	intron-Distal,intron-Proximal	3.61806	5.61877	K562	NONO
chr15	72495141	72495168	-	intron-Distal	3.56920	5.37841	K562	SF3B4
chr15	72493099	72493159	-	intron-Distal	3.22986	6.49379	K562	EFTUD2
chr15	72493074	72493123	-	intron-Distal,intron-Proximal	3.23637	5.01235	K562	RBFOX2
chr15	72522989	72523075	-	intron-Distal	4.13262	18.69784	HepG2	PCBP2
chr15	72494963	72495010	-	intron-Distal,intron-Proximal	3.97385	10.58560	K562	AQR
chr15	72495206	72495213	-	intron-Distal	4.43768	3.82734	K562	SF3B4
chr15	72522645	72522752	-	intron-Distal	3.42354	3.37567	HepG2	HNRNPK
chr15	72494785	72494794	-	intron-Distal,intron-Proximal	5.52264	6.02529	K562	SF3B4
chr15	72502680	72502687	-	intron-Distal,intron-Proximal	3.93587	9.59600	K562	AQR
chr15	72511452	72511470	-	intron-Distal,intron-Proximal	3.71319	4.35521	HepG2	BUD13
chr15	72522741	72522803	-	intron-Distal	4.64858	10.98479	HepG2	DDX59
chr15	72522630	72522696	-	intron-Distal	3.09368	5.42760	HepG2	XRN2
chr15	72523002	72523109	-	intron-Distal	3.97718	6.59396	K562	NONO
chr15	72494754	72494795	-	intron-Distal,intron-Proximal	4.47590	20.10899	K562	AQR
chr15	72522624	72522681	-	intron-Distal	4.62961	5.59071	K562	NONO
chr15	72522534	72522589	-	intron-Distal	4.10626	8.40143	HepG2	CSTF2T
chr15	72493007	72493071	-	intron-Distal,intron-Proximal	4.08171	3.56713	HepG2	SF3B4
chr15	72495840	72495884	-	intron-Distal	5.13830	9.34228	HepG2	RBFOX2
chr15	72511237	72511276	-	intron-Distal,intron-Proximal	6.55949	15.90046	K562	AQR
chr15	72523079	72523141	-	intron-Distal	4.06816	7.81163	HepG2	PCBP2
chr15	72523141	72523202	-	intron-Distal	6.62141	20.65813	HepG2	PCBP2
chr15	72522622	72522715	-	intron-Distal	3.97134	3.75100	HepG2	STAU2
chr15	72523082	72523167	-	intron-Distal	3.97660	8.76196	HepG2	DDX59
chr15	72494971	72495032	-	intron-Distal,intron-Proximal	3.11342	3.29220	HepG2	SF3B4
chr15	72496126	72496193	-	intron-Distal	4.78738	21.62671	HepG2	RBFOX2
chr15	72493236	72493295	-	intron-Distal	3.19937	3.61689	K562	RBFOX2
chr15	72522749	72522851	-	intron-Distal	4.80755	14.82746	HepG2	CSTF2T
chr15	72501939	72501965	-	intron-Distal,intron-Proximal	5.34418	8.34710	K562	AQR
chr15	72493108	72493212	-	intron-Distal	3.67817	16.06841	HepG2	RBFOX2
chr15	72499417	72499467	-	intron-Distal,intron-Proximal	4.54428	11.83800	K562	AQR
chr15	72501965	72501997	-	intron-Distal,intron-Proximal	5.59195	16.94745	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for PKM is not avaliable on ENCORE database.

Diffrential Expression

2,173 differentially expressed genes after Knockdown/Knockout PKM protein.

155 RBPs can affect the levels of PKM.

2,173 differentially expressed genes after Knockdown/Knockout PKM protein :

Only display 100 entries as example. Please click "View All" button to see all 2,173 entries.

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FUCA2	ENSG00000001036.9	1277.78880	1814.46020	-0.50590	7.37710	5.43760	HepG2	PKM
SEMA3F	ENSG00000001617.7	400.24500	274.38770	0.54460	3.67780	2.25540	HepG2	PKM
ANKIB1	ENSG00000001629.5	439.75600	642.91630	-0.54790	4.99650	3.36260	HepG2	PKM
CYP51A1	ENSG00000001630.11	1377.08080	2136.91070	-0.63390	5.91110	4.14480	HepG2	PKM
SLC7A2	ENSG00000003989.12	1835.34850	3698.96730	-1.01110	10.28620	8.10200	HepG2	PKM
ARF5	ENSG00000004059.6	700.02910	536.68230	0.38320	2.83980	1.59280	HepG2	PKM
FKBP4	ENSG00000004478.5	590.62700	857.97770	-0.53870	5.80650	4.05500	HepG2	PKM
ARHGAP33	ENSG00000004777.14	326.15810	182.85490	0.83480	6.39900	4.57620	HepG2	PKM
POLR2J	ENSG00000005075.11	591.41630	425.38940	0.47530	3.80020	2.35160	HepG2	PKM
CREBBP	ENSG00000005339.8	1432.72590	1106.06450	0.37320	2.78200	1.54900	HepG2	PKM
RHBDD2	ENSG00000005486.12	411.97340	285.14500	0.53080	3.55930	2.16170	HepG2	PKM
IBTK	ENSG00000005700.10	938.54370	1299.32250	-0.46930	3.54330	2.14920	HepG2	PKM
ITGA3	ENSG00000005884.13	84.58650	45.41780	0.89710	2.48910	1.32750	HepG2	PKM
LAMP2	ENSG00000005893.11	1896.12860	2357.20340	-0.31400	3.40310	2.03870	HepG2	PKM
TMEM98	ENSG00000006042.7	627.50070	836.66670	-0.41500	3.67050	2.24960	HepG2	PKM
SPATA20	ENSG00000006282.15	952.78960	731.00330	0.38220	3.35890	1.99950	HepG2	PKM
MAP3K9	ENSG00000006432.11	220.25260	308.13580	-0.48440	2.65350	1.45050	HepG2	PKM
JHDM1D	ENSG00000006459.6	892.28930	1489.73400	-0.73950	6.14010	4.34900	HepG2	PKM
PAF1	ENSG00000006712.10	815.06560	624.03640	0.38520	3.22570	1.89600	HepG2	PKM
ADIPOR2	ENSG00000006831.9	1420.95750	1799.04900	-0.34040	3.60220	2.19470	HepG2	PKM
LUC7L	ENSG00000007392.12	481.64460	759.74660	-0.65750	7.49740	5.55100	HepG2	PKM
TSR3	ENSG00000007520.3	185.07730	116.61280	0.66630	2.78690	1.55320	HepG2	PKM
PIGQ	ENSG00000007541.10	214.95780	122.27220	0.81390	4.39290	2.84200	HepG2	PKM
SPAG9	ENSG00000008294.16	1410.21810	2063.54460	-0.54920	4.35050	2.80240	HepG2	PKM
NFIX	ENSG00000008441.12	386.95810	282.63460	0.45310	2.69850	1.48200	HepG2	PKM
RHOBTB2	ENSG00000008853.12	299.75410	180.12940	0.73460	4.84790	3.23690	HepG2	PKM
RPS20	ENSG00000008988.5	3223.04870	3872.72500	-0.26490	2.99960	1.71770	HepG2	PKM
MLXIPL	ENSG00000009950.11	2474.24810	1706.75230	0.53560	4.41000	2.85560	HepG2	PKM
BAZ1B	ENSG00000009954.6	1403.23500	1791.62820	-0.35250	3.86820	2.40930	HepG2	PKM
IFFO1	ENSG00000010295.15	253.71960	159.79400	0.66690	3.64930	2.23460	HepG2	PKM
HIVEP2	ENSG00000010818.4	540.51650	877.97830	-0.69980	5.93230	4.16260	HepG2	PKM
CLCN6	ENSG00000011021.17	809.01150	1022.25410	-0.33750	2.86490	1.61220	HepG2	PKM
UTP18	ENSG00000011260.9	314.37970	478.99310	-0.60750	3.76200	2.32360	HepG2	PKM
WIZ	ENSG00000011451.13	574.54290	330.14170	0.79920	8.74170	6.68010	HepG2	PKM
PGM3	ENSG00000013375.11	1073.43050	1315.31580	-0.29320	2.49070	1.32850	HepG2	PKM
CLK1	ENSG00000013441.11	538.36860	891.87300	-0.72820	9.88010	7.73620	HepG2	PKM
ATP2C1	ENSG00000017260.15	576.32120	809.13940	-0.48950	4.71810	3.12600	HepG2	PKM
WWTR1	ENSG00000018408.10	1245.22100	1652.16500	-0.40800	4.78190	3.18200	HepG2	PKM
ZFP64	ENSG00000020256.15	406.88840	296.18300	0.45800	2.69880	1.48210	HepG2	PKM
ZDHHC6	ENSG00000023041.7	236.75630	344.88780	-0.54270	3.42680	2.05640	HepG2	PKM
RB1CC1	ENSG00000023287.8	977.00570	1293.79660	-0.40520	4.24080	2.70640	HepG2	PKM
ABCC2	ENSG00000023839.6	3686.29180	4449.30040	-0.27140	3.04620	1.75320	HepG2	PKM
TOMM34	ENSG00000025772.7	921.88010	687.34000	0.42350	3.96150	2.48340	HepG2	PKM
RTEL1-TNFRSF6B	ENSG00000026036.16	334.96940	200.03440	0.74370	2.58150	1.39630	HepG2	PKM
RNASET2	ENSG00000026297.11	1378.13980	2154.90240	-0.64490	11.85460	9.52900	HepG2	PKM
SNX1	ENSG00000028528.10	1007.75530	1414.59260	-0.48920	6.23400	4.43050	HepG2	PKM
NUP160	ENSG00000030066.9	844.22670	1068.86490	-0.34040	2.96540	1.68880	HepG2	PKM
UBA6	ENSG00000033178.8	481.91430	801.39530	-0.73370	6.29180	4.48070	HepG2	PKM
UHRF1	ENSG00000034063.9	882.83870	599.50160	0.55830	6.14200	4.34900	HepG2	PKM
MAP2K3	ENSG00000034152.14	351.02350	537.80060	-0.61550	3.53810	2.14500	HepG2	PKM
ASTE1	ENSG00000034533.7	97.51380	53.87290	0.85590	2.64800	1.44700	HepG2	PKM
RNF19A	ENSG00000034677.7	599.63820	960.06870	-0.67900	9.09850	7.00870	HepG2	PKM
GABARAPL2	ENSG00000034713.3	381.53340	506.23730	-0.40800	2.67960	1.46860	HepG2	PKM
TIMP2	ENSG00000035862.8	1082.48160	781.24280	0.47040	5.09510	3.44450	HepG2	PKM
RFC1	ENSG00000035928.10	1553.87630	2044.45410	-0.39580	4.86360	3.25020	HepG2	PKM
TBC1D23	ENSG00000036054.8	396.61850	591.55620	-0.57680	5.20780	3.54100	HepG2	PKM
TUBG2	ENSG00000037042.8	614.10390	404.06920	0.60380	5.72350	3.97860	HepG2	PKM
MFAP3	ENSG00000037749.7	318.18600	443.49050	-0.47900	3.21310	1.88670	HepG2	PKM
EDC4	ENSG00000038358.10	1063.06080	838.11280	0.34290	2.91520	1.65110	HepG2	PKM
VCAN	ENSG00000038427.11	2658.55600	1770.45060	0.58640	10.77930	8.55400	HepG2	PKM
PHF23	ENSG00000040633.8	415.30010	308.28070	0.42980	2.61240	1.41930	HepG2	PKM
PHKA2	ENSG00000044446.7	1774.12900	2376.68740	-0.42180	5.73740	3.99030	HepG2	PKM
HSPA5	ENSG00000044574.7	10620.90700	14522.62390	-0.45140	8.76250	6.69630	HepG2	PKM
DSG2	ENSG00000046604.8	2290.02980	2770.29150	-0.27470	2.83130	1.58580	HepG2	PKM
SCML1	ENSG00000047634.10	978.64410	1596.08770	-0.70570	4.71010	3.11960	HepG2	PKM
USP28	ENSG00000048028.7	324.90930	485.70060	-0.58000	3.55750	2.16040	HepG2	PKM
RSF1	ENSG00000048649.9	732.13740	922.20520	-0.33300	2.61780	1.42320	HepG2	PKM
MCUR1	ENSG00000050393.7	410.36500	293.53920	0.48330	3.13530	1.82350	HepG2	PKM
PIK3CB	ENSG00000051382.4	506.31030	651.58200	-0.36390	2.46270	1.30740	HepG2	PKM
HEBP2	ENSG00000051620.6	397.29790	520.07110	-0.38850	2.52930	1.35900	HepG2	PKM
MSMO1	ENSG00000052802.8	1679.98180	2264.36720	-0.43070	2.76720	1.53750	HepG2	PKM
ARID4B	ENSG00000054267.16	594.02370	774.35240	-0.38250	2.59240	1.40370	HepG2	PKM
PUM2	ENSG00000055917.11	1577.35320	2018.02670	-0.35540	4.02250	2.53060	HepG2	PKM
MRPL43	ENSG00000055950.12	384.21080	243.71380	0.65660	4.80590	3.20050	HepG2	PKM
USP13	ENSG00000058056.4	553.50370	805.51530	-0.54130	3.76100	2.32320	HepG2	PKM
ZC3H11A	ENSG00000058673.11	1853.20090	2271.94330	-0.29390	3.06730	1.77170	HepG2	PKM
NDC1	ENSG00000058804.10	731.04840	919.88690	-0.33150	2.67880	1.46840	HepG2	PKM
ALDH18A1	ENSG00000059573.4	3058.96060	3733.94520	-0.28770	2.62130	1.42600	HepG2	PKM
TARBP1	ENSG00000059588.5	587.19040	780.62960	-0.41080	3.50270	2.11820	HepG2	PKM
SLC2A3	ENSG00000059804.11	3511.57360	10505.30080	-1.58090	28.05980	24.97250	HepG2	PKM
YBX3	ENSG00000060138.8	1114.19030	1385.87920	-0.31480	2.88850	1.63020	HepG2	PKM
CREB3L3	ENSG00000060566.9	332.68170	183.97780	0.85450	6.87300	4.99430	HepG2	PKM
MPC1	ENSG00000060762.14	549.77730	757.70910	-0.46280	4.22090	2.68990	HepG2	PKM
ELMO2	ENSG00000062598.13	776.61350	588.25530	0.40070	3.31010	1.95830	HepG2	PKM
SPHK2	ENSG00000063176.11	111.04040	50.02900	1.15010	4.48000	2.91550	HepG2	PKM
ISOC2	ENSG00000063241.3	413.27210	288.21920	0.51980	3.41230	2.04540	HepG2	PKM
MED29	ENSG00000063322.9	591.39630	417.83740	0.50110	4.14810	2.63230	HepG2	PKM
CASP8	ENSG00000064012.17	731.42810	560.52670	0.38380	3.04250	1.75070	HepG2	PKM
ASUN	ENSG00000064102.10	283.25040	428.26230	-0.59640	4.45840	2.89760	HepG2	PKM
AP3D1	ENSG00000065000.11	1890.83380	1518.66600	0.31610	2.59010	1.40200	HepG2	PKM
UHRF1BP1	ENSG00000065060.12	1253.74270	938.94750	0.41700	2.77230	1.54100	HepG2	PKM
IPO5	ENSG00000065150.14	3152.71830	3775.84360	-0.26020	2.78850	1.55390	HepG2	PKM
OAT	ENSG00000065154.7	564.81250	821.10370	-0.53980	2.82050	1.57860	HepG2	PKM
KARS	ENSG00000065427.10	1586.24440	2267.31820	-0.51540	8.17270	6.15650	HepG2	PKM
ADAT1	ENSG00000065457.6	198.64400	121.29660	0.71150	3.40950	2.04420	HepG2	PKM
PDIA5	ENSG00000065485.13	837.30360	1053.96920	-0.33200	2.85890	1.60760	HepG2	PKM
SEC61A2	ENSG00000065665.16	129.62210	70.08600	0.88700	3.54670	2.15200	HepG2	PKM
PPP2R5A	ENSG00000066027.7	335.48890	453.62080	-0.43520	2.79170	1.55630	HepG2	PKM
DIP2B	ENSG00000066084.8	1440.02870	1802.53050	-0.32390	3.33280	1.97790	HepG2	PKM
DDX3Y	ENSG00000067048.12	1980.51520	2593.47230	-0.38900	2.86500	1.61220	HepG2	PKM
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

155 RBPs can affect the gene expression of PKM :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PKM	ENSG00000067225.13	19704.77410	40440.51310	-1.03730	7.72270	6.25930	HepG2	ABCF1
PKM	ENSG00000067225.13	34798.36020	26851.55910	0.37390	7.21490	6.32860	HepG2	ACO1
PKM	ENSG00000067225.13	24677.56570	29671.66090	-0.26590	2.02370	1.34840	HepG2	ASCC1
PKM	ENSG00000067225.13	39414.90890	32494.43660	0.27840	5.64060	4.71970	HepG2	AUH
PKM	ENSG00000067225.13	13564.59420	18924.61680	-0.48040	5.47380	4.24860	HepG2	BCLAF1
PKM	ENSG00000067225.13	20565.53210	33439.70570	-0.70130	19.88710	18.16810	HepG2	CALR
PKM	ENSG00000067225.13	23244.06560	28190.58910	-0.27840	2.31150	1.59980	HepG2	CIRBP
PKM	ENSG00000067225.13	16339.45230	26842.09250	-0.71610	20.24650	18.81230	HepG2	CKAP4
PKM	ENSG00000067225.13	9004.53610	13452.12030	-0.57910	9.40840	7.62060	HepG2	CSTF2
PKM	ENSG00000067225.13	42347.72360	34287.96420	0.30450	2.38030	1.77610	HepG2	CELF1
PKM	ENSG00000067225.13	31411.39330	36863.22540	-0.23090	4.10000	3.22620	HepG2	DAZAP1
PKM	ENSG00000067225.13	18907.98650	24832.17610	-0.39320	7.50360	6.24360	HepG2	DDX19B
PKM	ENSG00000067225.13	11833.39040	24521.86560	-1.05120	31.28930	29.37530	HepG2	DDX21
PKM	ENSG00000067225.13	13904.22390	24006.55080	-0.78790	22.22330	19.91890	HepG2	DDX24
PKM	ENSG00000067225.13	13528.64570	20036.36400	-0.56660	5.66820	3.90030	HepG2	DDX27
PKM	ENSG00000067225.13	12686.39030	16221.07820	-0.35460	3.03000	1.57060	HepG2	DDX28
PKM	ENSG00000067225.13	18595.16090	34350.33650	-0.88540	16.26600	14.87920	HepG2	DDX3X
PKM	ENSG00000067225.13	27741.61220	21415.71450	0.37330	2.73290	1.96330	HepG2	DDX55
PKM	ENSG00000067225.13	24152.67260	31981.48820	-0.40510	4.50400	3.22870	HepG2	DDX5
PKM	ENSG00000067225.13	16922.18640	21692.47660	-0.35830	4.25060	3.04580	HepG2	DHX30
PKM	ENSG00000067225.13	10522.14960	25688.72670	-1.28770	42.65110	40.82160	HepG2	DKC1
PKM	ENSG00000067225.13	19202.89010	22490.55990	-0.22800	2.97110	2.24720	HepG2	DNAJC21
PKM	ENSG00000067225.13	18765.28700	22293.44840	-0.24860	5.63580	4.75150	HepG2	DNAJC2
PKM	ENSG00000067225.13	15303.30830	24426.56760	-0.67460	11.33470	9.63550	HepG2	EEF2
PKM	ENSG00000067225.13	15081.11180	20361.70120	-0.43310	4.95930	3.47630	HepG2	EFTUD2
PKM	ENSG00000067225.13	21667.62010	30666.34810	-0.50110	4.55650	3.07390	HepG2	EIF2S2
PKM	ENSG00000067225.13	16468.93170	23163.62550	-0.49210	9.20290	7.46710	HepG2	EIF3G
PKM	ENSG00000067225.13	17522.12690	25277.38760	-0.52870	5.73870	3.04900	HepG2	EIF3H
PKM	ENSG00000067225.13	11999.37920	31344.45470	-1.38530	31.79400	29.67150	HepG2	EIF4A3
PKM	ENSG00000067225.13	21653.69920	30524.94550	-0.49540	3.85150	3.04460	HepG2	EIF4B
PKM	ENSG00000067225.13	28158.14790	36371.93080	-0.36930	7.25920	6.01810	HepG2	EIF4G1
PKM	ENSG00000067225.13	24090.97510	34841.24660	-0.53230	7.51420	6.19980	HepG2	EIF4G2
PKM	ENSG00000067225.13	23413.62230	35022.12200	-0.58090	5.19490	3.74210	HepG2	ESF1
PKM	ENSG00000067225.13	13069.94800	37310.23860	-1.51330	46.17440	44.27900	HepG2	ETF1
PKM	ENSG00000067225.13	14567.22330	23967.80490	-0.71840	3.31410	2.19860	HepG2	FTO
PKM	ENSG00000067225.13	20376.02360	29341.32680	-0.52610	5.80550	4.85550	HepG2	G3BP1
PKM	ENSG00000067225.13	22128.70220	31156.90260	-0.49360	6.11330	4.77870	HepG2	G3BP2
PKM	ENSG00000067225.13	14702.41500	17654.02860	-0.26390	2.35770	1.53830	HepG2	GEMIN5
PKM	ENSG00000067225.13	13683.91330	27121.48900	-0.98700	18.81410	17.29810	HepG2	GPKOW
PKM	ENSG00000067225.13	17015.34080	25086.90470	-0.56010	3.35250	1.80900	HepG2	HLTF
PKM	ENSG00000067225.13	7648.75450	22706.04190	-1.56980	70.00720	67.69280	HepG2	HNRNPA1
PKM	ENSG00000067225.13	15973.36660	25256.76760	-0.66100	13.43840	12.01790	HepG2	HNRNPC
PKM	ENSG00000067225.13	42702.17890	29723.83570	0.52260	7.72030	6.59850	HepG2	HNRNPK
PKM	ENSG00000067225.13	37360.82520	33578.13460	0.15390	2.15160	1.54720	HepG2	HNRNPL
PKM	ENSG00000067225.13	16455.97000	25882.60450	-0.65340	10.53210	9.39890	HepG2	HNRNPLL
PKM	ENSG00000067225.13	19514.80670	25089.74860	-0.36250	10.11860	9.01960	HepG2	HNRNPU
PKM	ENSG00000067225.13	21871.99770	29822.82390	-0.44730	4.89890	4.02330	HepG2	IGF2BP2
PKM	ENSG00000067225.13	16619.55410	27995.46270	-0.75230	2.81430	1.82460	HepG2	IGF2BP3
PKM	ENSG00000067225.13	22748.61890	25628.26310	-0.17200	3.13010	2.35450	HepG2	ILF2
PKM	ENSG00000067225.13	21902.04920	30000.39300	-0.45390	3.55610	2.40160	HepG2	KHSRP
PKM	ENSG00000067225.13	19479.10370	26658.30680	-0.45270	3.09110	1.76720	HepG2	KRR1
PKM	ENSG00000067225.13	28947.62850	47869.91090	-0.72570	4.34660	3.29920	HepG2	LARP4
PKM	ENSG00000067225.13	17037.36750	22401.34780	-0.39490	4.86910	3.24650	HepG2	LIN28B
PKM	ENSG00000067225.13	12788.27860	31646.98670	-1.30720	33.66010	31.58690	HepG2	MAGOH
PKM	ENSG00000067225.13	22085.69520	31822.37840	-0.52690	5.61900	4.74550	HepG2	MATR3
PKM	ENSG00000067225.13	22569.43270	33033.10430	-0.54950	5.31080	4.21880	HepG2	MSI2
PKM	ENSG00000067225.13	17880.91300	26398.53370	-0.56200	4.14820	2.94890	HepG2	MTPAP
PKM	ENSG00000067225.13	16542.07780	32570.56480	-0.97740	18.70120	17.14740	HepG2	NCBP2
PKM	ENSG00000067225.13	13825.81670	19291.52050	-0.48060	6.56810	4.36840	HepG2	NIP7
PKM	ENSG00000067225.13	16196.62000	28999.73990	-0.84030	14.39850	12.78990	HepG2	PABPC4
PKM	ENSG00000067225.13	17290.46880	30652.86630	-0.82600	46.84030	44.91440	HepG2	PCBP1
PKM	ENSG00000067225.13	15223.71070	24753.14110	-0.70130	6.06760	4.57390	HepG2	PCBP2
PKM	ENSG00000067225.13	7682.35720	16397.44780	-1.09390	47.21350	43.56990	HepG2	PKM
PKM	ENSG00000067225.13	21067.80380	24757.49310	-0.23280	2.30590	1.59270	HepG2	PRPF4
PKM	ENSG00000067225.13	6098.59190	16517.10530	-1.43740	43.35710	40.82880	HepG2	PRPF8
PKM	ENSG00000067225.13	19634.65540	31191.39190	-0.66770	29.60800	28.19580	HepG2	PTBP1
PKM	ENSG00000067225.13	26695.54500	34895.07370	-0.38640	5.06980	4.29250	HepG2	PUF60
PKM	ENSG00000067225.13	21680.08580	37044.20340	-0.77290	23.40790	22.02550	HepG2	PUM1
PKM	ENSG00000067225.13	23298.37210	37016.18630	-0.66790	18.32970	16.69570	HepG2	PUM2
PKM	ENSG00000067225.13	17271.35700	27349.52330	-0.66310	16.86220	15.56960	HepG2	PUS1
PKM	ENSG00000067225.13	23546.95620	33779.01380	-0.52060	13.06250	11.85140	HepG2	QKI
PKM	ENSG00000067225.13	14534.34600	23881.78910	-0.71640	5.12170	4.17730	HepG2	RAVER1
PKM	ENSG00000067225.13	29982.20360	40485.07320	-0.43330	8.04270	6.68580	HepG2	RBM15
PKM	ENSG00000067225.13	28035.40350	31183.98050	-0.15360	1.78890	1.34870	HepG2	RBM22
PKM	ENSG00000067225.13	19059.70520	30657.39470	-0.68570	16.25140	14.69580	HepG2	RBM25
PKM	ENSG00000067225.13	17395.43240	25727.32890	-0.56460	8.23710	6.52320	HepG2	RBM27
PKM	ENSG00000067225.13	21365.19760	34712.23160	-0.70020	34.62540	33.16890	HepG2	NELFE
PKM	ENSG00000067225.13	16680.89340	32331.16450	-0.95470	65.09730	62.95700	HepG2	RECQL
PKM	ENSG00000067225.13	16596.40400	25115.83480	-0.59770	10.97280	9.76910	HepG2	RPLP0
PKM	ENSG00000067225.13	12657.01950	23469.35840	-0.89080	9.10030	7.48170	HepG2	RPS10
PKM	ENSG00000067225.13	10604.70650	19294.50090	-0.86350	24.84650	23.30730	HepG2	RPS19
PKM	ENSG00000067225.13	10954.63630	23727.24520	-1.11500	30.28690	27.89360	HepG2	RPS2
PKM	ENSG00000067225.13	8300.87190	16069.99390	-0.95300	7.62740	6.31700	HepG2	RPS3A
PKM	ENSG00000067225.13	19288.79960	24220.55100	-0.32850	3.28950	2.11370	HepG2	RPS5
PKM	ENSG00000067225.13	9962.26770	16338.50330	-0.71370	10.33940	8.96340	HepG2	RRP9
PKM	ENSG00000067225.13	18401.75740	22343.23950	-0.28000	6.90610	5.95570	HepG2	SAFB2
PKM	ENSG00000067225.13	21708.70600	34444.65420	-0.66600	6.18690	5.15500	HepG2	SF3A3
PKM	ENSG00000067225.13	16172.49600	25618.23200	-0.66360	12.24800	10.86260	HepG2	SF3B1
PKM	ENSG00000067225.13	16273.66920	32472.55380	-0.99670	52.79900	50.86100	HepG2	SF3B4
PKM	ENSG00000067225.13	23809.47830	26055.50210	-0.13010	2.46150	1.84980	HepG2	SMN1
PKM	ENSG00000067225.13	29615.55950	35220.31920	-0.25010	3.07910	2.56000	HepG2	SRFBP1
PKM	ENSG00000067225.13	11052.58270	33895.01440	-1.61670	203.87250	201.52340	HepG2	SRSF1
PKM	ENSG00000067225.13	25844.33970	34455.65020	-0.41490	6.47960	5.57640	HepG2	SRSF5
PKM	ENSG00000067225.13	18293.18590	22905.21360	-0.32440	8.09530	7.00800	HepG2	SRSF7
PKM	ENSG00000067225.13	8912.74730	30578.10990	-1.77860	69.01780	67.33240	HepG2	SSB
PKM	ENSG00000067225.13	31530.92890	39183.98480	-0.31350	5.61380	4.78560	HepG2	SUCLG1
PKM	ENSG00000067225.13	10151.83050	21318.03110	-1.07030	22.57370	20.98040	HepG2	SUPV3L1
PKM	ENSG00000067225.13	20572.16020	30468.09870	-0.56660	16.50530	15.30150	HepG2	TAF15
PKM	ENSG00000067225.13	10132.89200	25229.51650	-1.31610	44.16880	41.94890	HepG2	TARDBP
PKM	ENSG00000067225.13	17444.53340	26108.43160	-0.58170	2.64070	1.59460	HepG2	TBRG4
PKM	ENSG00000067225.13	19851.67870	27993.97550	-0.49590	9.16170	7.65800	HepG2	TIA1
PKM	ENSG00000067225.13	6521.08840	24377.52550	-1.90240	96.46790	94.33070	HepG2	TIAL1
PKM	ENSG00000067225.13	17188.72780	23988.73320	-0.48090	3.35890	1.74940	HepG2	TRA2A
PKM	ENSG00000067225.13	26257.84320	34093.52730	-0.37670	5.42520	4.15310	HepG2	TUFM
PKM	ENSG00000067225.13	19456.04830	34921.38760	-0.84390	7.80480	6.75370	HepG2	U2AF1
PKM	ENSG00000067225.13	24672.69400	36089.11760	-0.54860	5.41910	4.22760	HepG2	UBE2L3
PKM	ENSG00000067225.13	8571.81330	12592.54570	-0.55490	7.26220	6.02490	HepG2	UCHL5
PKM	ENSG00000067225.13	27621.52730	31398.17840	-0.18490	2.68910	1.65370	HepG2	UTP18
PKM	ENSG00000067225.13	15576.75500	23493.86140	-0.59290	4.86470	3.17710	HepG2	XRCC5
PKM	ENSG00000067225.13	17172.45570	20985.29350	-0.28930	2.71850	1.99970	HepG2	XRN2
PKM	ENSG00000067225.13	13042.52360	24433.35170	-0.90560	27.32650	25.62020	HepG2	ZC3H8
PKM	ENSG00000067225.13	15546.60010	23869.85890	-0.61860	5.61350	3.69030	HepG2	ZRANB2
PKM	ENSG00000067225.13	10032.92120	13057.22100	-0.38010	4.81940	3.20800	K562	AARS
PKM	ENSG00000067225.13	32391.14720	17102.90390	0.92130	15.22600	14.00600	K562	AGGF1
PKM	ENSG00000067225.13	29695.01400	18795.31510	0.65970	10.30610	8.09270	K562	AKAP8
PKM	ENSG00000067225.13	32326.88500	17796.79180	0.86100	5.77580	4.81130	K562	AKAP8L
PKM	ENSG00000067225.13	19895.96050	26935.70350	-0.43700	5.37120	3.56040	K562	APOBEC3C
PKM	ENSG00000067225.13	10653.40160	21569.33640	-1.01770	5.56550	4.78380	K562	AQR
PKM	ENSG00000067225.13	15909.38930	12855.65200	0.30740	5.89930	3.86240	K562	BCCIP
PKM	ENSG00000067225.13	32599.21490	19249.93340	0.75990	14.29760	12.26400	K562	BOP1
PKM	ENSG00000067225.13	19367.29280	15729.20400	0.30010	2.93820	1.61410	K562	CIRBP
PKM	ENSG00000067225.13	26085.50120	20467.12920	0.34980	3.44740	2.56920	K562	CPSF6
PKM	ENSG00000067225.13	26427.16110	37536.62880	-0.50630	11.85030	9.91040	K562	CELF1
PKM	ENSG00000067225.13	13777.84390	10893.48620	0.33880	5.65990	3.76910	K562	DDX27
PKM	ENSG00000067225.13	19661.27990	13820.26980	0.50850	9.37350	7.34680	K562	DDX3X
PKM	ENSG00000067225.13	23276.48580	26697.76320	-0.19780	3.22700	2.53170	K562	DDX47
PKM	ENSG00000067225.13	25968.85240	19147.83210	0.43950	2.33850	1.54270	K562	DKC1
PKM	ENSG00000067225.13	7954.53390	14100.98340	-0.82590	3.93140	1.79700	K562	DNAJC2
PKM	ENSG00000067225.13	15122.21070	11348.97700	0.41400	3.64950	2.58870	K562	EFTUD2
PKM	ENSG00000067225.13	27929.38770	15899.39460	0.81270	6.36730	5.34130	K562	EIF2S2
PKM	ENSG00000067225.13	7676.35990	12583.34380	-0.71300	5.75340	4.26700	K562	EIF3A
PKM	ENSG00000067225.13	17443.81890	12147.63280	0.52190	3.32010	2.18060	K562	EIF3D
PKM	ENSG00000067225.13	20735.87520	30526.48720	-0.55790	18.25910	15.99890	K562	EIF4G2
PKM	ENSG00000067225.13	21931.74920	17528.65740	0.32320	4.06950	2.49590	K562	EXOSC5
PKM	ENSG00000067225.13	13966.16340	10106.28670	0.46660	3.87990	1.82340	K562	FAM120A
PKM	ENSG00000067225.13	24866.43350	18000.99600	0.46600	6.47160	5.13400	K562	FIP1L1
PKM	ENSG00000067225.13	17380.39810	12404.21310	0.48650	5.44120	3.76170	K562	FKBP4
PKM	ENSG00000067225.13	31265.85630	20826.89590	0.58600	9.31940	7.69890	K562	FMR1
PKM	ENSG00000067225.13	21495.74960	17653.57490	0.28400	2.20960	1.39660	K562	FTO
PKM	ENSG00000067225.13	16574.37420	13621.97640	0.28290	3.95730	1.79620	K562	FUBP3
PKM	ENSG00000067225.13	7167.24390	15016.08690	-1.06700	44.88030	42.61350	K562	FXR1
PKM	ENSG00000067225.13	4022.54230	9395.24320	-1.22380	7.46080	6.18250	K562	G3BP2
PKM	ENSG00000067225.13	19242.83230	30149.00500	-0.64780	4.21600	1.98620	K562	HNRNPA0
PKM	ENSG00000067225.13	12606.27430	17220.64270	-0.45000	6.63800	5.02010	K562	HNRNPA1
PKM	ENSG00000067225.13	7744.81180	14286.76570	-0.88340	25.72680	23.98840	K562	HNRNPC
PKM	ENSG00000067225.13	18191.79620	24403.95170	-0.42380	5.16040	4.08940	K562	HSPD1
PKM	ENSG00000067225.13	9325.85180	12925.37110	-0.47090	4.89070	2.92450	K562	ILF3
PKM	ENSG00000067225.13	11190.70300	14833.93060	-0.40660	3.56720	1.34400	K562	KHSRP
PKM	ENSG00000067225.13	31315.09900	18885.28440	0.72950	13.17310	10.94020	K562	KIF1C
PKM	ENSG00000067225.13	16835.42430	12739.75130	0.40210	5.65400	3.36590	K562	LSM11
PKM	ENSG00000067225.13	29296.13510	18079.12940	0.69630	3.19260	2.01340	K562	MAK16
PKM	ENSG00000067225.13	11030.46240	15391.56530	-0.48060	4.16210	3.01190	K562	MATR3
PKM	ENSG00000067225.13	33395.17600	21156.50630	0.65840	7.29490	5.68140	K562	MBNL1
PKM	ENSG00000067225.13	23350.70430	19073.79090	0.29180	3.34890	2.38320	K562	METAP2
PKM	ENSG00000067225.13	25739.69830	14829.31600	0.79540	8.27630	6.43000	K562	NAA15
PKM	ENSG00000067225.13	16767.63650	14417.86720	0.21770	2.47090	1.31100	K562	NCBP2
PKM	ENSG00000067225.13	16912.30910	22296.32620	-0.39870	3.75200	2.78240	K562	PCBP3
PKM	ENSG00000067225.13	17222.90400	13948.47370	0.30410	3.34620	1.75720	K562	PHF6
PKM	ENSG00000067225.13	11326.17230	18871.30200	-0.73650	11.39540	8.26690	K562	PKM
PKM	ENSG00000067225.13	14165.65830	31367.01820	-1.14690	47.34350	44.18210	K562	PNPT1
PKM	ENSG00000067225.13	10562.24080	17101.48360	-0.69520	14.24530	12.49070	K562	POLR2G
PKM	ENSG00000067225.13	26508.94730	20436.31310	0.37520	4.17340	3.13890	K562	PPIG
PKM	ENSG00000067225.13	7365.20900	11043.95500	-0.58450	4.52320	3.56500	K562	PRPF8
PKM	ENSG00000067225.13	17665.76700	12809.63800	0.46360	7.28680	5.69050	K562	PSIP1
PKM	ENSG00000067225.13	19773.98540	33306.43500	-0.75220	16.96020	14.88330	K562	PUF60
PKM	ENSG00000067225.13	29798.52020	35428.51110	-0.24970	3.23570	2.07930	K562	PUM1
PKM	ENSG00000067225.13	51249.66560	17646.35290	1.53810	6.83370	6.02470	K562	PUS1
PKM	ENSG00000067225.13	31504.73230	17196.34880	0.87340	19.11270	17.51930	K562	RBM15
PKM	ENSG00000067225.13	11271.03860	14365.24270	-0.35000	2.09750	1.37040	K562	RBM22
PKM	ENSG00000067225.13	13919.49220	11687.40430	0.25210	2.97220	1.94330	K562	RCC2
PKM	ENSG00000067225.13	13304.88600	21260.01220	-0.67620	8.05160	5.10540	K562	SAFB2
PKM	ENSG00000067225.13	7997.10280	15239.58920	-0.93030	26.93210	24.27750	K562	SAFB
PKM	ENSG00000067225.13	37631.69400	23822.56700	0.65950	24.74350	22.55930	K562	SF3A3
PKM	ENSG00000067225.13	10244.32130	13624.66790	-0.41140	4.62170	2.94980	K562	SLBP
PKM	ENSG00000067225.13	18462.50810	24406.74690	-0.40270	16.71170	14.68860	K562	SRPK2
PKM	ENSG00000067225.13	10351.54700	12793.10880	-0.30550	3.75210	2.49750	K562	SRSF4
PKM	ENSG00000067225.13	11110.15730	17154.00610	-0.62670	11.73210	10.04840	K562	SYNCRIP
PKM	ENSG00000067225.13	17746.00350	13089.44750	0.43900	6.16110	4.62160	K562	TRIM56
PKM	ENSG00000067225.13	15786.22570	21699.07490	-0.45900	4.64470	2.34550	K562	TUFM
PKM	ENSG00000067225.13	14833.17180	11314.48920	0.39060	3.61920	2.44240	K562	UCHL5
PKM	ENSG00000067225.13	33184.85800	25598.74820	0.37440	11.35640	10.02380	K562	UPF1
PKM	ENSG00000067225.13	17771.72420	22777.73150	-0.35800	11.47600	9.88700	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PKM is not available on ENCORE database.

8 RBPs can affect the splicing of PKM :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PKM	ENSG00000067225.13	chr15	-	72513508	72513625			72511284	72511451	72523236	72523454	-0.60200	0.00037	0.09379	excluded	K562	IGF2BP2
SE	PKM	ENSG00000067225.13	chr15	-	72513508	72513625			72511284	72511451	72523456	72523531	0.06600	0.00000	0.00019	included	K562	U2AF2
SE	PKM	ENSG00000067225.13	chr15	-	72495362	72495529			72492814	72492996	72499068	72499221	-0.26400	0.00238	0.07260	excluded	K562	HNRNPU
SE	PKM	ENSG00000067225.13	chr15	-	72495362	72495529			72492814	72492996	72499068	72499221	0.23300	0.00034	0.06661	included	HepG2	DDX55
A3SS	PKM	ENSG00000067225.13	chr15	-	72494873	72495076			72494873	72495016	72499068	72499221	-0.34800	0.00000	0.00001	shorter	K562	AQR
MXE	PKM	ENSG00000067225.13	chr15	-	72494794	72494961	72495362	72495529	72492814	72492996	72499068	72499221	0.07600	0.00000	0.00000	1included	K562	PTBP1
MXE	PKM	ENSG00000067225.13	chr15	-	72494794	72494961	72499068	72499221	72492814	72492996	72499467	72499618	-0.12700	0.00000	0.00008	2included	HepG2	NOL12
MXE	PKM	ENSG00000067225.13	chr15	-	72494794	72494961	72499068	72499221	72492814	72492996	72499467	72499618	-0.14200	0.00000	0.00000	2included	HepG2	HNRNPL

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
PKM	Product_ID: A303-660A Lot_ID: 1 Source: Bethyl Labs Target Name: PKM-human
PKM	Product_ID: 4053S Lot_ID: 6 Source: Cell Signaling Technology Target Name: PKM-human

PKM

General Information

Functions

Localization(RBPImage: PKM)

Domains (AlphaFold: PKM)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PKM is not avaliable on ENCORE database.

57 proteins are bound to PKM RNA:

eCLIP assay for PKM is not avaliable on ENCORE database.

Diffrential Expression

2,173 differentially expressed genes after Knockdown/Knockout PKM protein :

155 RBPs can affect the gene expression of PKM :

The Knockdown/knockout RNA-Seq assay for PKM is not available on ENCORE database.

8 RBPs can affect the splicing of PKM :

The Knockdown/knockout RNA-Seq assay for PKM is not avaliable on ENCORE database.