TARBP1

General Information

Gene Name       : TARBP1
Gene ID             : ENSG00000059588.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TARBP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TARBP1ENSG00000059588.943.4934.1238.80ENCSR000AEF
HepG2TARBP1ENSG00000059588.923.3335.3829.36ENCSR985KAT
K562TARBP1ENSG00000059588.914.7915.4115.10ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TARBP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TARBP1 RNA is bound by 35 proteins.  







eCLIP assay for TARBP1 is not avaliable on ENCORE database.





35 proteins are bound to TARBP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1234527160234527226-3'-UTR,intron-Distal3.712873.64832HepG2ZC3H11A
chr1234601401234601450-CDS,intron-Distal,intron-Proximal4.507185.68315HepG2PRPF4
chr1234553913234553971-CDS,intron-Distal4.7366524.88719HepG2BCLAF1
chr1234614681234614734-CDS,intron-Distal4.999726.91190HepG2PPIG
chr1234596026234596071-CDS,intron-Distal4.156796.52185HepG2HLTF
chr1234606971234606977-CDS,intron-Distal3.485655.56491HepG2BCLAF1
chr1234586240234586249-CDS,intron-Distal4.659557.53358HepG2BCLAF1
chr1234529109234529142-CDS,intron-Distal4.088878.79898HepG2BCLAF1
chr1234565038234565071-CDS,intron-Distal,intron-Proximal3.301545.25890HepG2EIF3H
chr1234593415234593438-CDS,intron-Distal3.818789.93259HepG2BCLAF1
chr1234614172234614232-CDS,intron-Distal3.804623.11730HepG2DGCR8
chr1234601401234601450-CDS,intron-Distal,intron-Proximal3.9285023.92775HepG2BCLAF1
chr1234614271234614349-CDS,intron-Distal4.296773.96304K562CSTF2T
chr1234601399234601436-CDS,intron-Distal,intron-Proximal4.081028.51579HepG2EIF3H
chr1234608461234608471-CDS,intron-Distal4.083556.65960HepG2BCLAF1
chr1234614424234614489-CDS,intron-Distal4.042506.15796HepG2DDX3X
chr1234564975234564999-CDS,intron-Distal3.356147.93794HepG2BCLAF1
chr1234614267234614344-CDS,intron-Distal4.462933.86455HepG2GTF2F1
chr1234565938234566031-CDS,intron-Distal4.213053.16826HepG2WDR43
chr1234599647234599680-CDS,intron-Distal3.433303.57687HepG2EIF3H
chr1234614177234614220-CDS,intron-Distal5.830966.24391K562GEMIN5
chr1234565391234565419-CDS,intron-Distal4.622559.74753HepG2BCLAF1
chr1234601401234601451-CDS,intron-Distal,intron-Proximal3.8561910.53109K562DDX24
chr1234546190234546226-CDS,intron-Distal,intron-Proximal4.1978313.37200HepG2BCLAF1
chr1234564893234564931-CDS,intron-Distal5.0177212.44336HepG2BCLAF1
chr1234541658234541728-CDS,intron-Distal3.972637.06029HepG2GRWD1
chr1234565915234566029-CDS,intron-Distal3.511957.63744HepG2EIF3D
chr1234565940234566011-CDS,intron-Distal4.7102110.15742HepG2EIF3H
chr1234529437234529520-CDS,intron-Distal3.168233.26655HepG2LSM11
chr1234563393234563453-CDS,intron-Distal5.4488224.61729HepG2BCLAF1
chr1234536942234536961-CDS,intron-Distal4.6850610.80414HepG2BCLAF1
chr1234565930234565964-CDS,intron-Distal4.1358512.38345HepG2BCLAF1
chr1234528258234528299-CDS,intron-Distal,intron-Proximal4.387074.10264K562ZNF622
chr1234596006234596078-CDS,intron-Distal,intron-Proximal3.823753.23099HepG2UCHL5
chr1234566011234566047-CDS,intron-Distal4.4233919.68920HepG2BCLAF1
chr1234614171234614238-CDS,intron-Distal4.608423.77801HepG2FKBP4
chr1234565934234566036-CDS,intron-Distal3.864319.10042HepG2HLTF
chr1234565968234566017-CDS,intron-Distal3.060024.86474HepG2FASTKD2
chr1234569156234569199-CDS,intron-Distal4.0075515.57800HepG2BCLAF1
chr1234582578234582663-CDS,intron-Distal4.111696.90188HepG2ZNF800
chr1234586175234586229-CDS,intron-Distal4.4620614.24397HepG2BCLAF1
chr1234595002234595054-CDS,intron-Distal5.176485.73530K562DDX24
chr1234536926234536967-CDS,intron-Distal,intron-Proximal4.254044.72880HepG2GRWD1
chr1234614173234614224-CDS,intron-Distal4.909713.59041K562DROSHA
chr1234593461234593481-CDS,intron-Distal4.349943.82843HepG2PPIG
chr1234565161234565183-CDS,intron-Distal,intron-Proximal3.494015.09491HepG2EIF3H
chr1234596005234596026-CDS,intron-Distal,intron-Proximal4.789775.92514HepG2HLTF
chr1234561441234561472-CDS,intron-Distal3.636073.12746HepG2GRWD1
chr1234614150234614229-CDS,intron-Distal4.523355.28165K562CSTF2T
chr1234536927234536942-CDS,intron-Distal3.5688010.08874HepG2BCLAF1
chr1234582552234582586-CDS,intron-Distal3.9691411.21209HepG2BCLAF1
chr1234561418234561455-CDS,intron-Distal,intron-Proximal4.6449818.65654HepG2BCLAF1
chr1234599648234599680-CDS,intron-Distal3.9739316.36868HepG2BCLAF1
chr1234541806234541878-CDS,intron-Distal,intron-Proximal3.7863711.89449K562AQR
chr1234565931234565968-CDS,intron-Distal3.281614.16429HepG2FASTKD2
chr1234584235234584280-CDS,intron-Distal5.3141417.45530HepG2BCLAF1
chr1234596008234596075-CDS,intron-Distal4.3964932.40924HepG2BCLAF1
chr1234556513234556557-CDS,intron-Distal4.7343519.54768HepG2BCLAF1
chr1234586294234586311-CDS,intron-Distal4.512879.30195HepG2BCLAF1
chr1234569157234569178-CDS,intron-Distal3.221013.07152HepG2HLTF
chr1234614004234614060-CDS,intron-Distal4.009613.94684HepG2CSTF2T
chr1234561480234561537-CDS,intron-Distal4.5541018.21191HepG2BCLAF1
chr1234528159234528242-CDS,intron-Distal,intron-Proximal3.782663.90917HepG2ZC3H11A
chr1234566011234566048-CDS,intron-Distal,intron-Proximal3.789858.73924HepG2EIF3H
chr1234582555234582584-CDS,intron-Distal3.163253.53125K562DDX24
chr1234563453234563500-CDS,intron-Distal4.5835516.88216HepG2BCLAF1
chr1234565161234565188-CDS,intron-Distal,intron-Proximal3.9365612.80995HepG2BCLAF1
chr1234566018234566048-CDS,intron-Distal,intron-Proximal3.799003.05460HepG2PPIG
chr1234569292234569314-CDS,intron-Distal4.4724710.24470HepG2BCLAF1
chr1234606938234606962-CDS,intron-Distal4.3694711.87770HepG2BCLAF1
chr1234582586234582671-CDS,intron-Distal4.1278523.22931HepG2BCLAF1
chr1234613925234613991-CDS,intron-Distal3.516117.56497HepG2EIF3H
chr1234596008234596131-CDS,intron-Distal5.559258.66757K562DDX24
chr1234565964234566004-CDS,intron-Distal4.8262621.78560HepG2BCLAF1
chr1234556455234556513-CDS,intron-Distal5.1139019.15489HepG2BCLAF1
chr1234541649234541710-CDS,intron-Distal3.480449.40911HepG2PPIG
chr1234553829234553859-CDS,intron-Distal,intron-Proximal4.1537611.21209HepG2BCLAF1
chr1234541655234541731-CDS,intron-Distal3.6816519.19021HepG2BCLAF1
chr1234573020234573076-CDS,intron-Distal,intron-Proximal4.8147217.79964HepG2BCLAF1
chr1234541652234541738-CDS,intron-Distal3.466043.05347HepG2UCHL5
chr1234584308234584318-CDS,intron-Distal4.391898.47938HepG2BCLAF1
chr1234536926234536959-CDS,intron-Distal,intron-Proximal5.205187.60796HepG2PPIG
chr1234569155234569195-CDS,intron-Distal,intron-Proximal4.139327.67612HepG2EIF3H
chr1234536986234537009-CDS,intron-Distal,intron-Proximal3.310873.43213K562UCHL5
chr1234582592234582688-CDS,intron-Distal4.753799.08097K562DDX24
chr1234565050234565069-CDS,intron-Distal,intron-Proximal3.996789.50935HepG2BCLAF1
chr1234611767234611803-intron-Distal3.408633.68481HepG2HNRNPM
chr1234545096234545187-intron-Distal3.053546.17038K562AQR
chr1234611639234611716-intron-Distal3.6452316.11179HepG2SUGP2
chr1234544323234544453-intron-Distal3.175803.52283HepG2SAFB
chr1234611102234611167-intron-Distal5.2129220.72821HepG2SUGP2
chr1234545342234545403-intron-Distal3.168326.24581HepG2U2AF2
chr1234547183234547333-intron-Distal4.527064.07628HepG2PTBP1
chr1234610448234610492-intron-Distal5.8652915.81858HepG2SUGP2
chr1234610387234610427-intron-Distal3.188303.93186HepG2MATR3
chr1234611491234611567-intron-Distal4.5495823.55823HepG2SUGP2
chr1234548910234548968-intron-Distal4.450315.31529HepG2SUGP2
chr1234610517234610596-intron-Distal4.9299922.24617HepG2SUGP2
chr1234543475234543543-intron-Distal3.208513.22951HepG2HNRNPU
chr1234546102234546122-intron-Distal,intron-Proximal3.188243.29213HepG2KHSRP
chr1234601139234601204-intron-Distal4.040863.41738HepG2PTBP1
chr1234536310234536361-intron-Distal3.950973.20552HepG2KHSRP
chr1234551541234551597-intron-Distal3.353994.35402HepG2SUGP2
chr1234533622234533720-intron-Distal4.472489.27589HepG2PCBP2
chr1234609254234609316-intron-Distal3.362197.13214HepG2SUGP2
chr1234612051234612115-intron-Distal3.268534.53157HepG2MATR3
chr1234611684234611733-intron-Distal5.0695516.50410K562HNRNPM
chr1234611985234612011-intron-Distal3.105706.84019HepG2SUGP2
chr1234611229234611320-intron-Distal4.9805924.60095HepG2SUGP2
chr1234553027234553111-intron-Distal3.299783.30286HepG2PTBP1
chr1234532876234532975-intron-Distal4.476607.10832HepG2DDX59
chr1234609456234609504-intron-Distal5.5512813.16112HepG2SUGP2
chr1234536288234536369-intron-Distal3.874363.49011K562KHSRP
chr1234609512234609564-intron-Distal4.9994316.29026HepG2SUGP2
chr1234532965234533084-intron-Distal4.184514.07750HepG2HNRNPK
chr1234545187234545219-intron-Distal4.0932215.15306K562AQR
chr1234611721234611734-intron-Distal5.9945223.00434HepG2HNRNPM
chr1234611669234611721-intron-Distal6.1889927.83767HepG2HNRNPM
chr1234610364234610423-intron-Distal3.9562514.58845HepG2SUGP2
chr1234610957234611085-intron-Distal4.3446934.42859HepG2SUGP2
chr1234548709234548780-intron-Distal3.394733.59351HepG2MATR3
chr1234610215234610267-intron-Distal6.1121420.06933HepG2SUGP2
chr1234611348234611387-intron-Distal4.1815713.27306HepG2SUGP2
chr1234541845234541896-intron-Distal,intron-Proximal4.348083.98315HepG2SF3B4
chr1234609934234610004-intron-Distal5.1280025.89595HepG2SUGP2
chr1234610280234610322-intron-Distal5.6000913.35701HepG2SUGP2
chr1234550167234550289-intron-Distal3.309763.59351HepG2MATR3
chr1234611567234611639-intron-Distal5.5263135.82963HepG2SUGP2
chr1234553020234553093-intron-Distal4.708003.62238HepG2MATR3
chr1234610921234610935-intron-Distal3.309763.59351HepG2MATR3
chr1234609097234609136-intron-Distal4.268078.40280HepG2SUGP2
chr1234552600234552653-intron-Distal3.914773.54208HepG2SUGP2
chr1234532924234532974-intron-Distal6.2173817.27708HepG2PCBP2
chr1234584950234585035-intron-Distal4.270024.78128HepG2SUGP2
chr1234541859234541993-intron-Distal,intron-Proximal3.723518.65519K562KHSRP
chr1234611009234611066-intron-Distal4.203897.32721HepG2MATR3
chr1234610221234610254-intron-Distal4.729535.37222HepG2MATR3
chr1234545219234545237-intron-Distal4.5000812.35151K562AQR
chr1234611387234611441-intron-Distal4.3257014.02890HepG2SUGP2
chr1234546025234546093-intron-Distal,intron-Proximal3.4103611.26081HepG2U2AF2
chr1234610703234610759-intron-Distal4.6804519.52616HepG2SUGP2
chr1234610890234610948-intron-Distal5.1434916.29026HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TARBP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TARBP1 is not available on ENCORE database.

  • 103 RBPs can affect the levels of TARBP1.  








The Knockdown/knockout RNA-Seq assay for TARBP1 is not available on ENCORE database.





103 RBPs can affect the gene expression of TARBP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TARBP1ENSG00000059588.5715.98670951.39930-0.410102.984801.95130HepG2ADAR
TARBP1ENSG00000059588.51107.123201421.08210-0.360202.111901.64040HepG2AKAP1
TARBP1ENSG00000059588.51837.319002519.48110-0.455509.388408.24700HepG2AUH
TARBP1ENSG00000059588.51286.88850928.883000.470204.409103.67380HepG2BOP1
TARBP1ENSG00000059588.5775.030801206.42900-0.638408.939307.66940HepG2CALR
TARBP1ENSG00000059588.51824.895501501.023100.281804.166603.38280HepG2CKAP4
TARBP1ENSG00000059588.51046.49530799.641600.388003.158802.01430HepG2CSTF2
TARBP1ENSG00000059588.51531.947502069.53330-0.433906.851305.92610HepG2CELF1
TARBP1ENSG00000059588.51615.480101388.502000.218302.557301.75290HepG2DDX19B
TARBP1ENSG00000059588.51966.875101377.196600.514105.836104.50960HepG2DDX24
TARBP1ENSG00000059588.51244.20740964.217800.367702.735401.35440HepG2DDX28
TARBP1ENSG00000059588.5797.751401361.24760-0.770908.691207.63580HepG2DDX3X
TARBP1ENSG00000059588.5912.749101272.66530-0.479603.105702.29390HepG2DDX55
TARBP1ENSG00000059588.5807.235401169.43760-0.534804.058503.32230HepG2DDX6
TARBP1ENSG00000059588.51202.653801436.33790-0.256202.633601.97090HepG2DKC1
TARBP1ENSG00000059588.5904.512001162.82340-0.362402.363901.50950HepG2EEF2
TARBP1ENSG00000059588.52093.033701124.111700.8967012.9150011.69640HepG2EIF2S1
TARBP1ENSG00000059588.5677.00510943.95900-0.479603.201202.23470HepG2EIF3D
TARBP1ENSG00000059588.52051.917001209.573500.762406.779905.73460HepG2EIF4B
TARBP1ENSG00000059588.51396.269101103.061300.340002.469601.43780HepG2ESF1
TARBP1ENSG00000059588.52525.325802892.83590-0.196001.875001.35950HepG2ETF1
TARBP1ENSG00000059588.51503.84310623.296101.2706028.4965026.13720HepG2FUBP3
TARBP1ENSG00000059588.51473.356101162.729100.341502.150501.56160HepG2G3BP1
TARBP1ENSG00000059588.52061.238901234.483600.739509.658607.99540HepG2G3BP2
TARBP1ENSG00000059588.5797.829801475.66790-0.8872011.098609.03290HepG2GNB2L1
TARBP1ENSG00000059588.51220.42300967.235400.335302.566201.94150HepG2HNRNPA1
TARBP1ENSG00000059588.5762.065101075.83640-0.497504.549803.67530HepG2HNRNPC
TARBP1ENSG00000059588.52009.506701188.801100.757207.233605.52950HepG2KHSRP
TARBP1ENSG00000059588.51577.600801372.402100.200902.257901.33440HepG2KIF1C
TARBP1ENSG00000059588.5732.179001040.61320-0.507205.200804.11800HepG2MSI2
TARBP1ENSG00000059588.51226.52910873.819200.489104.936903.32610HepG2NAA15
TARBP1ENSG00000059588.51388.289702206.44270-0.6684013.1524011.54520HepG2NOL12
TARBP1ENSG00000059588.51357.24040817.977600.730409.031907.73790HepG2NSUN2
TARBP1ENSG00000059588.5563.331201357.71920-1.269104.781303.59100HepG2PABPC1
TARBP1ENSG00000059588.5587.19040780.62960-0.410803.502702.11820HepG2PKM
TARBP1ENSG00000059588.5933.665202106.27720-1.1737028.4056026.76810HepG2PUF60
TARBP1ENSG00000059588.51443.310902234.28830-0.6304011.116209.81890HepG2PUM2
TARBP1ENSG00000059588.52169.047901301.245400.7371015.8663014.54850HepG2QKI
TARBP1ENSG00000059588.51028.993301502.85230-0.546502.071601.45370HepG2RAVER1
TARBP1ENSG00000059588.51176.239201506.78380-0.357303.651602.68140HepG2RBM15
TARBP1ENSG00000059588.51798.223202417.84750-0.427207.218106.47260HepG2RBM22
TARBP1ENSG00000059588.51684.800201337.217800.333204.361903.71050HepG2NELFE
TARBP1ENSG00000059588.51854.874701245.517200.5745012.1242010.97170HepG2RECQL
TARBP1ENSG00000059588.51018.449701396.11100-0.455004.559903.71240HepG2RPLP0
TARBP1ENSG00000059588.5710.82800921.87270-0.375102.438301.55330HepG2SERBP1
TARBP1ENSG00000059588.51027.998201718.97000-0.741706.693305.61440HepG2SF3A3
TARBP1ENSG00000059588.51971.102701250.921800.6559015.7153014.48330HepG2SF3B4
TARBP1ENSG00000059588.51035.505101530.50370-0.563702.727001.77880HepG2SMNDC1
TARBP1ENSG00000059588.51995.480002730.82020-0.4526010.8207010.00670HepG2SRFBP1
TARBP1ENSG00000059588.51489.510502079.69030-0.481509.142208.09220HepG2SRSF5
TARBP1ENSG00000059588.51371.702201062.315200.368705.329704.60840HepG2SRSF9
TARBP1ENSG00000059588.51743.377402365.13940-0.440004.844204.06200HepG2SUCLG1
TARBP1ENSG00000059588.5632.56960868.20810-0.456803.791102.70300HepG2SUPT6H
TARBP1ENSG00000059588.5772.649201266.96520-0.713506.381505.41720HepG2SUPV3L1
TARBP1ENSG00000059588.52973.007201173.750201.3407057.1045054.97850HepG2TAF15
TARBP1ENSG00000059588.51348.02890899.203500.584006.296205.26220HepG2TARDBP
TARBP1ENSG00000059588.51591.201601078.401400.561108.077506.66280HepG2TIA1
TARBP1ENSG00000059588.5701.473001099.91280-0.648906.514405.56620HepG2U2AF1
TARBP1ENSG00000059588.5391.760101261.62560-1.687207.485805.78170HepG2U2AF2
TARBP1ENSG00000059588.51581.494802178.20230-0.461803.740102.76090HepG2UBE2L3
TARBP1ENSG00000059588.51161.05700748.467100.633306.534005.35820HepG2UCHL5
TARBP1ENSG00000059588.51221.194101524.46030-0.320004.275303.43730HepG2UPF1
TARBP1ENSG00000059588.51089.009601471.81160-0.434606.952906.07730HepG2UTP3
TARBP1ENSG00000059588.51090.317301676.61920-0.6208016.6414015.58160HepG2ZNF622
TARBP1ENSG00000059588.5491.92300671.88690-0.449803.251601.95840K562AARS
TARBP1ENSG00000059588.51132.359801418.88840-0.325403.838103.18870K562AGGF1
TARBP1ENSG00000059588.51075.542201559.10510-0.535706.120504.51690K562AKAP8
TARBP1ENSG00000059588.51188.759401476.40820-0.312602.404401.79500K562AKAP8L
TARBP1ENSG00000059588.51133.153601537.90120-0.440604.104003.41700K562AQR
TARBP1ENSG00000059588.5956.016701695.68060-0.8268016.4062013.63540K562CCDC124
TARBP1ENSG00000059588.5554.99250858.88410-0.630004.528202.85330K562EEF2
TARBP1ENSG00000059588.5581.97330829.83340-0.511903.964402.85620K562EFTUD2
TARBP1ENSG00000059588.5638.77870888.47090-0.476002.538001.55140K562EIF3D
TARBP1ENSG00000059588.5724.812701020.42200-0.493506.015904.85640K562EIF3G
TARBP1ENSG00000059588.5717.073701073.67240-0.582406.248405.02480K562EIF4A3
TARBP1ENSG00000059588.52478.785402001.360700.308603.954502.83590K562EIF4G2
TARBP1ENSG00000059588.5753.37400937.19590-0.315002.565001.32410K562EWSR1
TARBP1ENSG00000059588.5882.87720638.474400.467503.264802.02290K562FKBP4
TARBP1ENSG00000059588.5615.597901116.57120-0.8590016.8901015.50810K562FXR1
TARBP1ENSG00000059588.51164.89120831.966500.485503.884902.15690K562GEMIN5
TARBP1ENSG00000059588.51519.489601053.713600.528006.706805.08150K562HNRNPA1
TARBP1ENSG00000059588.5248.64490734.87650-1.5634028.0275026.20800K562HNRNPC
TARBP1ENSG00000059588.5955.444501360.46190-0.509904.498502.89240K562HNRNPK
TARBP1ENSG00000059588.5400.76240637.46460-0.669604.955903.66850K562HNRNPM
TARBP1ENSG00000059588.5898.981401361.52550-0.598904.998503.45080K562IGF2BP2
TARBP1ENSG00000059588.5918.371101431.42130-0.640308.756107.21550K562MAGOH
TARBP1ENSG00000059588.51125.035201499.85450-0.414903.646202.35500K562MAK16
TARBP1ENSG00000059588.5990.773001428.59520-0.528006.466304.97330K562MATR3
TARBP1ENSG00000059588.51342.95160844.181900.6697013.6316012.00640K562MTPAP
TARBP1ENSG00000059588.51176.65700937.961300.327004.327303.41700K562NSUN2
TARBP1ENSG00000059588.5996.013101398.96880-0.490105.892803.84170K562PCBP1
TARBP1ENSG00000059588.5696.94160879.80230-0.336102.140801.42350K562PPIG
TARBP1ENSG00000059588.5343.99920807.52420-1.2311017.1225015.22570K562PRPF8
TARBP1ENSG00000059588.5589.049101390.67720-1.2393022.3088020.49330K562PTBP1
TARBP1ENSG00000059588.51110.001002183.62300-0.9762018.1367015.98610K562PUF60
TARBP1ENSG00000059588.52901.319502322.714500.320803.647902.41260K562PUM1
TARBP1ENSG00000059588.5872.533101464.26020-0.746909.430608.47770K562PUS1
TARBP1ENSG00000059588.5829.397301426.64430-0.7825014.8374013.44990K562RBM15
TARBP1ENSG00000059588.5823.924301333.77280-0.694908.992607.33960K562RBM22
TARBP1ENSG00000059588.5936.431601299.96020-0.473204.026602.25570K562RBM34
TARBP1ENSG00000059588.5396.34330601.36780-0.601505.136003.77970K562RCC2
TARBP1ENSG00000059588.5382.88890508.61880-0.409702.479301.45680K562SAFB
TARBP1ENSG00000059588.5757.705401164.16360-0.619608.801907.22920K562SF3B4
TARBP1ENSG00000059588.5567.26000932.25950-0.716702.996801.70090K562SNRNP200
TARBP1ENSG00000059588.5789.296301363.26990-0.7884012.4585010.95560K562SRSF1
TARBP1ENSG00000059588.5520.31100700.97330-0.430003.081301.95620K562SRSF4
TARBP1ENSG00000059588.51342.857801016.781500.401203.233101.74410K562SSRP1
TARBP1ENSG00000059588.5441.92500572.57850-0.373702.536701.75240K562SYNCRIP
TARBP1ENSG00000059588.5505.116201379.84180-1.4498030.7343027.84410K562TARDBP
TARBP1ENSG00000059588.5900.948601330.98070-0.563007.118705.70670K562TIA1
TARBP1ENSG00000059588.5868.14510633.759600.453903.125902.12540K562TIAL1
TARBP1ENSG00000059588.5987.147201305.79500-0.403603.380802.15020K562TRA2A
TARBP1ENSG00000059588.5751.463901085.20180-0.530204.146602.75010K562U2AF1
TARBP1ENSG00000059588.5765.815301120.83940-0.549506.797905.54510K562U2AF2
TARBP1ENSG00000059588.51213.31020850.996700.511605.780604.49190K562WDR3
TARBP1ENSG00000059588.51130.64600884.938300.353404.481103.42280K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TARBP1 is not available on ENCORE database.





25 RBPs can affect the splicing of TARBP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETARBP1ENSG00000059588.5chr1-234534127234534299234529391234529583234536926234537008-0.220000.000760.01684excludedK562SF3B4
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.315000.000550.01276excludedK562SF3B4
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.244000.000090.01242excludedHepG2PRPF8
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.169000.000230.05519excludedHepG2DKC1
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.327000.000000.00000excludedHepG2U2AF2
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.191000.004690.04413excludedK562AQR
SETARBP1ENSG00000059588.5chr1-2345452222345453192345416482345418452345461902345462770.798000.000000.00000includedHepG2UCHL5
SETARBP1ENSG00000059588.5chr1-2345365982345366942345341892345342992345369262345370080.367000.000020.00340includedK562SUPV3L1
SETARBP1ENSG00000059588.5chr1-234563062234563124234561418234561539234563321234563512-0.284000.008500.09287excludedK562PUS1
SETARBP1ENSG00000059588.5chr1-2345630622345631342345614182345615392345633212345635120.236000.000090.04277includedK562KHSRP
SETARBP1ENSG00000059588.5chr1-234599582234599680234596006234596142234601401234601454-0.317000.003130.05689excludedK562U2AF1
SETARBP1ENSG00000059588.5chr1-2345365982345366942345293912345295832345369262345370080.368000.000830.07661includedHepG2LARP4
SETARBP1ENSG00000059588.5chr1-2345452222345453192345416482345418452345461902345462770.473000.000150.01467includedHepG2HNRNPL
SETARBP1ENSG00000059588.5chr1-234534127234534299234529391234529583234536926234537008-0.163000.000000.00020excludedHepG2HNRNPL
SETARBP1ENSG00000059588.5chr1-2345452222345453192345416482345418452345461902345462770.641000.000000.00004includedK562HNRNPL
SETARBP1ENSG00000059588.5chr1-2345341272345342992345293912345295832345369262345370080.209000.000200.04777includedK562SBDS
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.205000.000050.02499excludedHepG2XPO5
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.298000.000010.00031excludedHepG2SRSF1
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.540000.000000.00000excludedHepG2SF3A3
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.335000.000020.00248excludedHepG2TIAL1
SETARBP1ENSG00000059588.5chr1-2345365982345366942345341272345342992345369262345370080.273000.000020.01536includedHepG2BCCIP
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.278000.000060.00455excludedHepG2SF3B4
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.421000.000000.00006excludedK562U2AF2
SETARBP1ENSG00000059588.5chr1-2345452222345453192345416482345418452345461902345462770.486000.000050.00375includedK562SF3B1
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.256000.003130.09481excludedK562SF3B1
SETARBP1ENSG00000059588.5chr1-2345410572345412262345369262345370082345416482345417390.065000.000070.00501includedHepG2HNRNPU
SETARBP1ENSG00000059588.5chr1-234563062234563134234561418234561539234563321234563512-0.246000.000010.00842excludedHepG2SLTM
SETARBP1ENSG00000059588.5chr1-234529107234529232234528161234528298234529391234529583-0.177000.005380.07341excludedK562HNRNPC
MXETARBP1ENSG00000059588.5chr1-2345341272345342992345365982345366942345293912345295832345369262345370080.130000.000290.019691includedHepG2BCCIP
MXETARBP1ENSG00000059588.5chr1-2345341272345342992345365982345366942345293912345295832345369262345370080.100000.004020.079191includedHepG2XRN2
MXETARBP1ENSG00000059588.5chr1-2345341272345342992345365982345366942345293912345295832345369262345370080.106000.003610.067411includedHepG2DDX55
MXETARBP1ENSG00000059588.5chr1-2345341272345342992345365982345366942345293912345295832345369262345370080.157000.000510.021531includedHepG2SUPV3L1
MXETARBP1ENSG00000059588.5chr1-2345341272345342992345365982345366942345293912345295832345369262345370080.179000.000010.002791includedHepG2LARP4
MXETARBP1ENSG00000059588.5chr1-2345341272345342682345365982345366942345293912345295832345369262345370080.175000.000000.000541includedHepG2HNRNPL
MXETARBP1ENSG00000059588.5chr1-2345341272345342992345365982345366942345293912345295832345369262345370080.130000.000010.001151includedHepG2HNRNPL
MXETARBP1ENSG00000059588.5chr1-234534127234534268234536598234536694234529391234529583234536926234537008-0.163000.000060.016042includedHepG2PRPF4
MXETARBP1ENSG00000059588.5chr1-234534127234534299234536598234536694234529391234529583234536926234537008-0.159000.000000.000572includedHepG2PRPF4
MXETARBP1ENSG00000059588.5chr1-2345341272345342682345365982345366942345293912345295832345369262345370080.216000.000230.008501includedK562SUPV3L1
MXETARBP1ENSG00000059588.5chr1-2345341892345342992345365982345366942345293912345295832345369262345370080.386000.000500.014371includedK562SUPV3L1
MXETARBP1ENSG00000059588.5chr1-2345341272345342992345365982345366942345293912345295832345369262345370080.152000.000450.013521includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TARBP1 is not avaliable on ENCORE database.