SF3B1

General Information

Gene Name       : SF3B1
Gene ID             : ENSG00000115524.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SF3B1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SF3B1ENSG00000115524.15290.24220.37255.31ENCSR000AEF
HepG2SF3B1ENSG00000115524.15253.38288.35270.87ENCSR985KAT
K562SF3B1ENSG00000115524.15175.50160.33167.92ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 506ENCSR133QEASF3B1K562ReleasedENCAB022ALQENCSR496UBM  
knockdown followed by RNA-seq SF3B1-BGKLV36-K562ENCSR047QHXSF3B1K562ReleasedENCSR424QCW   shRNAKD% = 39.1,46.9
knockdown followed by RNA-seq SF3B1-BGHLV35-HepG2ENCSR896CFVSF3B1HepG2ReleasedENCSR264TUE   shRNAKD% = 63.6,75.0
knockdown followed by RNA-seq SF3B1-BGKcLV11-K562ENCSR544ZCRSF3B1K562ReleasedENCSR292PXV   CRISPRKD% = 61.9,64.8






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
SF3B1506K562ENCSR133QEAENCSR496UBMENCAB022ALQab66774GR216813-1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
SF3B1ENCAB022ALQab66774GR216813-1Released, ENCODE3BGHLV35-41, Released, ENCODE3BGKcLV11-93, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SF3B1K562shRNAENCSR047QHXENCSR424QCWSF3B1_BGKLV36-43,SF3B1_BGKLV36-44NT_BGKLV36-1,NT_BGKLV36-239.1,46.9ReleasedENCODE3
SF3B1HepG2shRNABGHLV35-39,BGHLV35-40BGHLV35-1,BGHLV35-2NotSatisfiedENCODE3
SF3B1HepG2shRNAENCSR896CFVENCSR264TUESF3B1_BGHLV35-41,SF3B1_BGHLV35-42NT_BGHLV35-1,NT_BGHLV35-263.6,75.0ReleasedENCODE3
SF3B1K562CRISPRBGKcLV08-71,BGKcLV08-72BGKcLV08-1,BGKcLV08-220.9,12.9NotSatisfiedENCODE4
SF3B1K562CRISPRBGKcLV11-91,BGKcLV11-92BGKcLV11-1,BGKcLV11-262.0,57.3NotSatisfiedENCODE4
SF3B1K562CRISPRENCSR544ZCRENCSR292PXVSF3B1-BGKcLV11-93,SF3B1-BGKcLV11-94NT-BGKcLV11-1,NT-BGKcLV11-261.9,64.8ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
SF3B1Product_ID: ab66774
Lot_ID: GR216813-1
Source: Abcam
Target Name: SF3B1-human
SF3B1-HEPG2.png<br>Caption: Western blot following shRNA against SF3B1 in HepG2 whole cell lysate using SF3B1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against SF3B1.SF3B1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
K562_Abcam_ab66774_GR216813-1_SF3B1.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using SF3B1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-SF3B1 antibody (lanes under 'SF3B1').
SF3B1-K562-CRISPR.png<br>Caption: Western blot following CRISPR against SF3B1 in K562 whole cell lysate using SF3B1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SF3B1.SF3B1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets

  • SF3B1 protein binds to 22 RNA regions.  





Proteins bound to RNA

  • SF3B1 RNA is bound by 51 proteins.  






SF3B1 protein has 22 RNA targets:

Only display 100 entries as example. Please click "View All" button to see all 22 entries.     

RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
SF3B1chr82342871123428743+4.814006.30077K562SLC25A37intron-Distal
SF3B1chr79995055999950664+4.7236413.40463K562STAG3L5P-PVRIG2P-PILRB, PILRB, PVRIG2P3'-UTR,5'-UTR,intron-Distal,intron-Proximal
SF3B1chr29756003897560092-4.7467615.84700K562FAM178Bintron-Distal
SF3B1chr64374587243745933+4.07252400.00000K562VEGFAintron-Distal
SF3B1chr82342575823425867+3.0367218.56214K562SLC25A373'-UTR,CDS,intron-Proximal
SF3B1chr29755996997560027-4.1993315.32807K562FAM178Bintron-Distal
SF3B1chr194960777549607832+4.9414121.14168K562SNRNP70intron-Distal,intron-Proximal
SF3B1chr116260919362609209-7.08532400.00000K562WDR745'-UTR,intron-Distal
SF3B1chr12680050526800563+5.4827119.66603K562HMGN2intron-Proximal
SF3B1chr116260912662609160-5.65834400.00000K562WDR745'-UTR,intron-Distal
SF3B1chr195497231554972422+3.4031140.80457K562LENG83'-UTR,CDS,intron-Proximal
SF3B1chr116260916062609193-6.58251400.00000K562WDR745'-UTR,intron-Distal
SF3B1chr64374593343745968+4.90935400.00000K562VEGFAintron-Distal
SF3B1chr116260910062609114-5.0028415.72542K562WDR745'-UTR,intron-Distal
SF3B1chr1628102042810299+3.2702225.32101K562SRRM2intron-Proximal
SF3B1chr116260920962609252-7.19134105.65182K562WDR745'-UTR,intron-Distal
SF3B1chr174146469541464759-8.2943455.93329K562LINC00910intron-Distal
SF3B1chr64374600943746032+6.3016715.59701K562VEGFAintron-Distal
SF3B1chr1628202662820368+4.9986048.80863K562SRRM2CDS,intron-Proximal
SF3B1chr194960783249607879+5.1479521.86030K562SNRNP70intron-Proximal
SF3B1chr64374615543746200+3.8580125.55339K562VEGFACDS,intron-Distal,intron-Proximal
SF3B1chr64374596843745983+5.4282235.19116K562VEGFAintron-Distal




51 proteins are bound to SF3B1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2198284917198284937-3'-UTR,intron-Distal,intron-Proximal3.375449.09022HepG2U2AF1
chr2198281600198281621-3'-UTR,CDS,intron-Distal,intron-Proximal4.1661661.26439HepG2BCLAF1
chr2198283512198283527-3'-UTR,intron-Distal,intron-Proximal,polyA_site3.8689821.22766HepG2KHSRP
chr2198285752198285781-3'-UTR,CDS,intron-Distal,intron-Proximal3.081478.53663HepG2PPIG
chr2198285149198285191-3'-UTR,CDS,intron-Distal,intron-Proximal3.448103.68457K562LIN28B
chr2198284817198284881-3'-UTR,intron-Distal,intron-Proximal4.8161622.36117K562TIA1
chr2198285107198285174-3'-UTR,CDS,intron-Distal,intron-Proximal3.7117713.50820K562EFTUD2
chr2198285054198285107-3'-UTR,CDS,intron-Distal,intron-Proximal3.243713.30292HepG2RBM22
chr2198285113198285180-3'-UTR,CDS,intron-Distal,intron-Proximal4.250588.43093HepG2PRPF8
chr2198284937198284965-3'-UTR,intron-Distal,intron-Proximal3.474999.75227HepG2U2AF1
chr2198284224198284303-3'-UTR,intron-Distal3.352533.39414K562HNRNPA1
chr2198285000198285026-3'-UTR,intron-Distal5.3130016.03597K562PRPF8
chr2198285845198285857-3'-UTR,CDS,intron-Distal3.1481711.79307HepG2GRWD1
chr2198256775198256890-3'-UTR,intron-Distal,intron-Proximal3.264257.43059K562NOLC1
chr2198283232198283248-3'-UTR,CDS,intron-Distal,intron-Proximal4.02493400.00000HepG2BCLAF1
chr2198285026198285048-3'-UTR,intron-Distal5.5453922.53255K562PRPF8
chr2198283279198283294-3'-UTR,CDS,intron-Distal3.2097161.40670HepG2BCLAF1
chr2198256944198257007-3'-UTR,intron-Distal,intron-Proximal3.534899.71618K562TIA1
chr2198256952198257011-3'-UTR,intron-Distal,intron-Proximal4.794448.31731HepG2SUB1
chr2198256912198256994-3'-UTR,intron-Distal,intron-Proximal3.062268.15253HepG2PABPN1
chr2198283293198283315-3'-UTR,CDS,intron-Distal,intron-Proximal3.204996.37614K562GRWD1
chr2198256788198256886-3'-UTR,intron-Distal,intron-Proximal3.4561020.98405HepG2ZC3H11A
chr2198285035198285102-3'-UTR,intron-Distal,intron-Proximal4.782947.96388HepG2TIA1
chr2198283529198283546-3'-UTR,intron-Distal,intron-Proximal3.9144710.00830HepG2KHSRP
chr2198283275198283279-3'-UTR,CDS,intron-Distal3.3861850.22340HepG2BCLAF1
chr2198283515198283525-3'-UTR,intron-Distal,intron-Proximal,polyA_site5.9721533.58710K562KHSRP
chr2198285069198285165-3'-UTR,CDS,intron-Distal,intron-Proximal3.9252310.08968K562AQR
chr2198284930198284969-3'-UTR,intron-Distal,intron-Proximal3.8867545.82614HepG2U2AF2
chr2198284823198284886-3'-UTR,intron-Distal,intron-Proximal7.3973842.89612HepG2TIAL1
chr2198281558198281636-3'-UTR,CDS,intron-Distal,intron-Proximal3.233035.70490HepG2TRA2A
chr2198256711198256788-3'-UTR,intron-Distal3.9544321.99706HepG2ZC3H11A
chr2198285029198285050-3'-UTR,intron-Distal3.145695.79323HepG2U2AF1
chr2198283285198283340-3'-UTR,CDS,intron-Distal,intron-Proximal4.364513.56713HepG2SF3B4
chr2198283256198283337-3'-UTR,CDS,intron-Distal,intron-Proximal6.3246455.31824K562U2AF2
chr2198284913198284964-3'-UTR,intron-Distal,intron-Proximal4.483949.27995K562PRPF8
chr2198284837198284887-3'-UTR,intron-Distal,intron-Proximal5.394889.99473HepG2TIA1
chr2198283275198283337-3'-UTR,CDS,intron-Distal,intron-Proximal3.6113212.22365K562U2AF1
chr2198285001198285051-3'-UTR,intron-Distal3.115404.57933HepG2TIAL1
chr2198283625198283684-3'-UTR,CDS,intron-Distal,intron-Proximal4.0944561.79129HepG2U2AF2
chr2198283525198283608-3'-UTR,intron-Distal,intron-Proximal4.6999426.45722K562KHSRP
chr2198285003198285107-3'-UTR,CDS,intron-Distal,intron-Proximal3.6620021.00023K562EFTUD2
chr2198283248198283275-3'-UTR,CDS,intron-Distal3.6042183.25939HepG2BCLAF1
chr2198284993198285027-3'-UTR,intron-Distal3.0010522.64722HepG2U2AF2
chr2198284915198284930-3'-UTR,intron-Distal,intron-Proximal3.8734226.33214HepG2U2AF2
chr2198284843198284886-3'-UTR,intron-Distal,intron-Proximal3.7618710.19970K562PRPF8
chr2198256805198256879-3'-UTR,intron-Distal3.2629910.20509HepG2FUBP3
chr2198284975198285000-3'-UTR,intron-Distal5.158656.08021K562PRPF8
chr2198284351198284426-3'-UTR,intron-Distal3.112937.94673K562SF3B4
chr2198283546198283571-3'-UTR,intron-Distal,intron-Proximal3.844588.24411HepG2KHSRP
chr2198284917198284968-3'-UTR,intron-Distal,intron-Proximal4.194613.95991K562U2AF2
chr2198256785198256886-3'-UTR,intron-Distal,intron-Proximal5.3053837.92724HepG2SUB1
chr2198283272198283338-3'-UTR,CDS,intron-Distal,intron-Proximal4.94512400.00000HepG2U2AF2
chr2198256957198257011-3'-UTR,intron-Distal,intron-Proximal3.813756.54748K562PABPC4
chr2198285051198285122-3'-UTR,CDS,intron-Distal,intron-Proximal5.2548816.30022HepG2TIAL1
chr2198284981198285051-3'-UTR,intron-Distal4.146193.58455K562U2AF2
chr2198285125198285185-3'-UTR,CDS,intron-Distal,intron-Proximal3.5307631.80055HepG2GRWD1
chr2198284205198284301-3'-UTR,intron-Distal4.3227212.75947HepG2HNRNPA1
chr2198284303198284371-3'-UTR,intron-Distal3.3737041.36143HepG2U2AF2
chr2198285794198285840-3'-UTR,CDS,intron-Distal3.390018.02704K562BUD13
chr2198256738198256761-3'-UTR,intron-Distal3.791103.26655HepG2LSM11
chr2198256959198257010-3'-UTR,intron-Distal,intron-Proximal3.476504.48863K562NOLC1
chr2198285781198285842-3'-UTR,CDS,intron-Distal3.4743923.60232HepG2GRWD1
chr2198281543198281616-3'-UTR,CDS,intron-Distal,intron-Proximal3.4475119.24393K562UCHL5
chr2198283275198283337-3'-UTR,CDS,intron-Distal,intron-Proximal3.5891521.98447HepG2U2AF1
chr2198256896198256959-3'-UTR,intron-Distal,intron-Proximal4.309223.80143K562NOLC1
chr2198285050198285080-3'-UTR,intron-Distal,intron-Proximal3.844196.65059HepG2U2AF1
chr2198281621198281635-3'-UTR,CDS,intron-Distal4.0339968.32610HepG2BCLAF1
chr2198285840198285873-3'-UTR,CDS,intron-Distal,intron-Proximal3.513978.02704K562BUD13
chr2198285023198285099-3'-UTR,intron-Distal,intron-Proximal3.985919.75237K562TIA1
chr2198283624198283679-3'-UTR,CDS,intron-Distal,intron-Proximal3.161765.36452K562U2AF2
chr2198285051198285104-3'-UTR,intron-Distal,intron-Proximal4.9543919.48980K562PRPF8
chr2198299695198299736-5'-UTR,CDS,intron-Distal3.4728912.76586K562ZNF622
chr2198299695198299749-5'-UTR,CDS,intron-Distal,intron-Proximal6.0206811.96597K562DDX3X
chr2198299697198299758-5'-UTR,CDS,intron-Distal,intron-Proximal3.9439021.47606HepG2NCBP2
chr2198299697198299732-5'-UTR,CDS,intron-Distal4.1897314.39945HepG2GRWD1
chr2198267686198267718-CDS,intron-Distal3.3449210.84303HepG2GRWD1
chr2198266129198266173-CDS,intron-Distal4.0484560.25968HepG2BCLAF1
chr2198264984198265012-CDS,intron-Distal,intron-Proximal3.303965.95282K562YBX3
chr2198273207198273244-CDS,intron-Distal3.6133613.29099HepG2GRWD1
chr2198257695198257706-CDS,intron-Distal,intron-Proximal3.455863.89757HepG2LSM11
chr2198265441198265469-CDS,intron-Distal4.89261400.00000HepG2BCLAF1
chr2198273256198273303-CDS,intron-Distal4.269894.49000K562FXR2
chr2198281538198281568-CDS,intron-Distal,intron-Proximal3.6758328.55391HepG2GRWD1
chr2198288647198288680-CDS,intron-Distal3.0554611.62760HepG2NCBP2
chr2198265628198265659-CDS,intron-Distal4.8520357.29010HepG2BCLAF1
chr2198263099198263192-CDS,intron-Distal,intron-Proximal3.213916.13643K562AQR
chr2198288532198288543-CDS,intron-Distal,intron-Proximal3.667215.93304HepG2ZNF800
chr2198288531198288608-CDS,intron-Distal,intron-Proximal3.5954529.41391HepG2PPIG
chr2198281583198281600-CDS,intron-Distal,intron-Proximal3.6607530.71622HepG2BCLAF1
chr2198281496198281590-CDS,intron-Distal,intron-Proximal4.0460910.51724K562MTPAP
chr2198288548198288596-CDS,intron-Distal,intron-Proximal5.5349210.32591K562LIN28B
chr2198261017198261048-CDS,intron-Distal3.9212046.42628HepG2BCLAF1
chr2198281483198281534-CDS,intron-Distal,intron-Proximal3.2191618.47214HepG2PPIG
chr2198264776198264829-CDS,intron-Distal,intron-Proximal3.295994.37320K562PUM2
chr2198273262198273296-CDS,intron-Distal3.237475.33133K562BUD13
chr2198288649198288697-CDS,intron-Distal3.1615610.62479HepG2UCHL5
chr2198266477198266523-CDS,intron-Distal4.9061982.03270HepG2BCLAF1
chr2198260780198260787-CDS,intron-Distal4.1089332.58889HepG2BCLAF1
chr2198267686198267733-CDS,intron-Distal4.1299977.25331HepG2BCLAF1
chr2198265437198265554-CDS,intron-Distal,intron-Proximal3.621297.89959K562PUM1
chr2198265491198265582-CDS,intron-Distal4.042233.74028K562FXR1
chr2198267733198267759-CDS,intron-Distal4.0462552.94734HepG2BCLAF1
chr2198266465198266513-CDS,intron-Distal,intron-Proximal3.196525.44653HepG2LSM11
chr2198266469198266509-CDS,intron-Distal3.687545.43961HepG2AGGF1
chr2198274569198274632-CDS,intron-Distal3.274035.25508K562FXR2
chr2198265445198265509-CDS,intron-Distal4.9568126.27304HepG2ZNF800
chr2198281489198281520-CDS,intron-Distal,intron-Proximal3.4792347.12041HepG2BCLAF1
chr2198263243198263285-CDS,intron-Distal4.1960456.82071HepG2BCLAF1
chr2198267281198267287-CDS,intron-Distal4.3053536.44171HepG2BCLAF1
chr2198273122198273127-CDS,intron-Distal4.151006.57534HepG2ZNF800
chr2198265464198265543-CDS,intron-Distal3.146189.72728K562UCHL5
chr2198265438198265441-CDS,intron-Distal,intron-Proximal4.70524400.00000HepG2BCLAF1
chr2198288596198288692-CDS,intron-Distal,intron-Proximal6.1458844.24049K562LIN28B
chr2198260921198260964-CDS,intron-Distal3.845455.79041HepG2PRPF4
chr2198265573198265603-CDS,intron-Distal5.1460852.86356HepG2BCLAF1
chr2198265558198265594-CDS,intron-Distal3.062778.55955HepG2FXR2
chr2198268365198268432-CDS,intron-Distal4.44531400.00000HepG2BCLAF1
chr2198270175198270195-CDS,intron-Distal3.2887625.65455HepG2BCLAF1
chr2198267513198267542-CDS,intron-Distal3.5068019.47102HepG2HLTF
chr2198273142198273248-CDS,intron-Distal4.1934420.15569HepG2ZNF800
chr2198273134198273185-CDS,intron-Distal4.132447.90889K562FMR1
chr2198266768198266854-CDS,intron-Distal4.2072924.80231HepG2EIF3H
chr2198268308198268360-CDS,intron-Distal,intron-Proximal3.859838.03230HepG2ZNF800
chr2198274710198274716-CDS,intron-Distal3.9329714.83162K562YBX3
chr2198262813198262840-CDS,intron-Distal5.8954612.63780HepG2ZNF800
chr2198268368198268432-CDS,intron-Distal3.6371016.25770HepG2ZNF800
chr2198266147198266170-CDS,intron-Distal4.210845.04760HepG2UCHL5
chr2198263184198263208-CDS,intron-Distal,intron-Proximal4.8904286.48170HepG2BCLAF1
chr2198265120198265148-CDS,intron-Distal5.17248400.00000HepG2BCLAF1
chr2198257146198257178-CDS,intron-Distal3.187547.37965K562YBX3
chr2198268367198268426-CDS,intron-Distal3.3488816.45493HepG2GRWD1
chr2198266220198266248-CDS,intron-Distal3.106989.54321HepG2BUD13
chr2198267287198267316-CDS,intron-Distal3.5431743.16921HepG2BCLAF1
chr2198269800198269817-CDS,intron-Distal3.031784.16486HepG2PPIG
chr2198266465198266477-CDS,intron-Distal,intron-Proximal4.9663773.01687HepG2BCLAF1
chr2198273134198273186-CDS,intron-Distal3.146299.05622HepG2EIF3H
chr2198273205198273251-CDS,intron-Distal3.016218.03395HepG2FXR2
chr2198270170198270196-CDS,intron-Distal6.0037313.33487HepG2ZNF800
chr2198265474198265532-CDS,intron-Distal4.019479.86309HepG2AQR
chr2198262744198262783-CDS,intron-Distal4.6220873.51788HepG2BCLAF1
chr2198272723198272749-CDS,intron-Distal3.7056642.61663HepG2BCLAF1
chr2198264797198264840-CDS,intron-Distal4.247365.08313K562GRWD1
chr2198288620198288674-CDS,intron-Distal3.404144.24159K562RBM15
chr2198268369198268453-CDS,intron-Distal4.451393.55391K562FXR1
chr2198288646198288698-CDS,intron-Distal4.0503234.80635K562ZNF622
chr2198263184198263198-CDS,intron-Distal,intron-Proximal3.084915.62120K562ZNF622
chr2198281484198281598-CDS,intron-Distal,intron-Proximal3.1944530.26286K562ZNF622
chr2198269895198269901-CDS,intron-Distal,intron-Proximal4.8545747.52094HepG2BCLAF1
chr2198265075198265120-CDS,intron-Distal5.46074400.00000HepG2BCLAF1
chr2198267673198267710-CDS,intron-Distal4.1659912.29051HepG2EIF3H
chr2198265094198265150-CDS,intron-Distal4.1116917.61898HepG2ZNF800
chr2198266214198266243-CDS,intron-Distal4.9266374.19463HepG2BCLAF1
chr2198264810198264832-CDS,intron-Distal3.478663.39008HepG2AQR
chr2198266130198266174-CDS,intron-Distal3.400966.73053HepG2ZNF800
chr2198288625198288699-CDS,intron-Distal,intron-Proximal3.556059.35494K562DDX3X
chr2198281464198281483-CDS,intron-Distal,intron-Proximal4.2784013.24825HepG2PPIG
chr2198265435198265472-CDS,intron-Distal,intron-Proximal3.3924212.21503HepG2SDAD1
chr2198269802198269828-CDS,intron-Distal4.4780252.74659HepG2BCLAF1
chr2198288531198288545-CDS,intron-Distal,intron-Proximal3.2885913.99628HepG2GRWD1
chr2198267672198267686-CDS,intron-Distal,intron-Proximal4.4098683.58865HepG2BCLAF1
chr2198266808198266852-CDS,intron-Distal3.982489.50801HepG2ZNF800
chr2198257695198257704-CDS,intron-Distal,intron-Proximal3.946596.21520HepG2EIF3H
chr2198267707198267775-CDS,intron-Distal,intron-Proximal3.176305.85044HepG2AQR
chr2198274640198274700-CDS,intron-Distal3.000934.10137K562FMR1
chr2198262752198262841-CDS,intron-Distal,intron-Proximal3.8513114.46276HepG2EIF3H
chr2198257137198257140-CDS,intron-Distal4.483426.26288K562YBX3
chr2198262808198262834-CDS,intron-Distal3.776735.81804K562BUD13
chr2198257722198257773-CDS,intron-Distal,intron-Proximal3.7570410.03354HepG2EIF3H
chr2198267379198267398-CDS,intron-Distal5.494017.16233HepG2EIF3H
chr2198274716198274727-CDS,intron-Distal3.8343516.91514K562YBX3
chr2198268336198268367-CDS,intron-Distal3.127389.73471HepG2GRWD1
chr2198281568198281583-CDS,intron-Distal,intron-Proximal3.3459122.49565HepG2GRWD1
chr2198265438198265444-CDS,intron-Distal,intron-Proximal3.248827.43250HepG2PRPF4
chr2198266774198266813-CDS,intron-Distal4.2441353.47884HepG2BCLAF1
chr2198257152198257185-CDS,intron-Distal3.867278.78219HepG2ZC3H11A
chr2198265551198265603-CDS,intron-Distal3.011237.61480HepG2G3BP1
chr2198257156198257185-CDS,intron-Distal3.971045.31703HepG2EIF3H
chr2198257852198257910-CDS,intron-Distal3.2987714.99268HepG2EIF3H
chr2198288623198288649-CDS,intron-Distal3.6145012.93791HepG2UCHL5
chr2198264783198264863-CDS,intron-Distal3.284043.83372HepG2LIN28B
chr2198264781198264859-CDS,intron-Distal5.4007437.36208K562LIN28B
chr2198288545198288580-CDS,intron-Distal,intron-Proximal4.0055133.35307HepG2GRWD1
chr2198273207198273246-CDS,intron-Distal3.141425.69418HepG2PPIG
chr2198265151198265158-CDS,intron-Distal4.76394400.00000HepG2BCLAF1
chr2198264801198264845-CDS,intron-Distal3.0223311.96851HepG2GRWD1
chr2198281464198281484-CDS,intron-Distal,intron-Proximal3.4347312.84600HepG2GRWD1
chr2198265616198265628-CDS,intron-Distal4.6789629.50471HepG2BCLAF1
chr2198265501198265533-CDS,intron-Distal6.1301774.36058HepG2BCLAF1
chr2198266529198266577-CDS,intron-Distal4.7120757.13787HepG2BCLAF1
chr2198281542198281583-CDS,intron-Distal,intron-Proximal3.7584763.02070HepG2BCLAF1
chr2198264792198264852-CDS,intron-Distal4.1362012.15067HepG2ZNF800
chr2198288598198288679-CDS,intron-Distal,intron-Proximal3.563077.79539HepG2LIN28B
chr2198257871198257911-CDS,intron-Distal3.044475.24154HepG2ZNF800
chr2198265150198265158-CDS,intron-Distal5.2784018.68608HepG2ZNF800
chr2198268372198268432-CDS,intron-Distal4.4511512.29051HepG2EIF3H
chr2198265109198265121-CDS,intron-Distal3.356234.02671HepG2UCHL5
chr2198261048198261051-CDS,intron-Distal3.7963928.47413HepG2BCLAF1
chr2198267738198267785-CDS,intron-Distal,intron-Proximal3.512857.16774K562AQR
chr2198266491198266533-CDS,intron-Distal3.074374.14323K562YBX3
chr2198265543198265618-CDS,intron-Distal3.4627613.43334K562UCHL5
chr2198265444198265497-CDS,intron-Distal3.1564710.50158HepG2PRPF4
chr2198268308198268365-CDS,intron-Distal,intron-Proximal4.2539985.10595HepG2BCLAF1
chr2198263228198263292-CDS,intron-Distal3.5636310.89678HepG2FXR2
chr2198299695198299697-CDS,intron-Distal4.3407913.03293HepG2GRWD1
chr2198265436198265473-CDS,intron-Distal,intron-Proximal3.001726.76188K562DDX24
chr2198266477198266512-CDS,intron-Distal3.3520914.93293HepG2HLTF
chr2198265639198265657-CDS,intron-Distal3.757893.43526K562GRWD1
chr2198270182198270195-CDS,intron-Distal3.557456.51082HepG2PPIG
chr2198274525198274586-CDS,intron-Distal3.158285.08614K562YBX3
chr2198288678198288698-CDS,intron-Distal3.311263.22554HepG2TRA2A
chr2198266833198266854-CDS,intron-Distal3.210925.52535HepG2UCHL5
chr2198257869198257911-CDS,intron-Distal3.2012847.71124HepG2BCLAF1
chr2198267672198267684-CDS,intron-Distal,intron-Proximal4.521147.24138K562FXR2
chr2198268382198268433-CDS,intron-Distal3.471288.66021HepG2PRPF4
chr2198265438198265467-CDS,intron-Distal,intron-Proximal3.2852813.57863HepG2EIF3H
chr2198266466198266514-CDS,intron-Distal3.300037.02403HepG2FXR2
chr2198273207198273240-CDS,intron-Distal4.9008950.55426HepG2BCLAF1
chr2198288534198288572-CDS,intron-Distal,intron-Proximal3.9202650.83203HepG2BCLAF1
chr2198266719198266748-CDS,intron-Distal,intron-Proximal4.8879645.96521HepG2BCLAF1
chr2198257800198257851-CDS,intron-Distal4.9234179.86909HepG2BCLAF1
chr2198270044198270069-CDS,intron-Distal4.275904.51688K562YBX3
chr2198266214198266247-CDS,intron-Distal3.495386.25351HepG2G3BP1
chr2198264783198264850-CDS,intron-Distal3.026509.78587HepG2G3BP1
chr2198265438198265445-CDS,intron-Distal,intron-Proximal5.4361521.74948HepG2ZNF800
chr2198257855198257908-CDS,intron-Distal3.174375.25508K562FXR2
chr2198266243198266249-CDS,intron-Distal5.0062161.78412HepG2BCLAF1
chr2198264803198264871-CDS,intron-Distal5.0009123.77946HepG2EIF3H
chr2198267524198267549-CDS,intron-Distal3.057795.15190HepG2ZNF800
chr2198267280198267343-CDS,intron-Distal5.0474724.02707HepG2EIF3H
chr2198273204198273235-CDS,intron-Distal4.284045.04760HepG2UCHL5
chr2198267687198267731-CDS,intron-Distal3.3262211.18765HepG2PPIG
chr2198274727198274731-CDS,intron-Distal3.7921416.59600K562YBX3
chr2198266216198266240-CDS,intron-Distal3.207695.41277K562UCHL5
chr2198261019198261037-CDS,intron-Distal3.830996.46072HepG2EIF3H
chr2198267516198267533-CDS,intron-Distal3.292776.82123HepG2UCHL5
chr2198288592198288646-CDS,intron-Distal,intron-Proximal3.8333032.89681K562ZNF622
chr2198263236198263296-CDS,intron-Distal3.9023610.51594HepG2EIF3H
chr2198270133198270158-CDS,intron-Distal3.687696.10842HepG2ZNF800
chr2198264786198264889-CDS,intron-Distal,intron-Proximal4.81184400.00000HepG2BCLAF1
chr2198263186198263204-CDS,intron-Distal5.7987211.59419HepG2ZNF800
chr2198288600198288697-CDS,intron-Distal,intron-Proximal4.2006851.47312HepG2GRWD1
chr2198288580198288600-CDS,intron-Distal,intron-Proximal4.8668231.74561HepG2GRWD1
chr2198266825198266899-CDS,intron-Distal,intron-Proximal3.6379511.60641K562SF3B4
chr2198264976198265013-CDS,intron-Distal,intron-Proximal3.436898.59162K562LIN28B
chr2198281520198281531-CDS,intron-Distal,intron-Proximal3.4878832.19361HepG2BCLAF1
chr2198264871198264889-CDS,intron-Distal,intron-Proximal4.031559.41822HepG2EIF3H
chr2198268462198268493-CDS,intron-Distal,intron-Proximal3.890015.56912HepG2AQR
chr2198265082198265158-CDS,intron-Distal3.593009.24892HepG2SDAD1
chr2198267672198267685-CDS,intron-Distal,intron-Proximal3.693448.57849HepG2ZNF800
chr2198267279198267281-CDS,intron-Distal,intron-Proximal4.2860129.94188HepG2BCLAF1
chr2198288536198288592-CDS,intron-Distal,intron-Proximal4.2859618.12912K562ZNF622
chr2198273270198273292-CDS,intron-Distal3.539306.18248K562UCHL5
chr2198288609198288678-CDS,intron-Distal,intron-Proximal3.213794.92423HepG2TRA2A
chr2198257695198257710-CDS,intron-Distal,intron-Proximal4.554827.96375HepG2ZC3H11A
chr2198263184198263207-CDS,intron-Distal,intron-Proximal4.422937.10972HepG2SDAD1
chr2198265472198265513-CDS,intron-Distal3.473298.70244HepG2SDAD1
chr2198281484198281531-CDS,intron-Distal,intron-Proximal3.9612828.50871HepG2GRWD1
chr2198266124198266173-CDS,intron-Distal4.0442512.45736HepG2EIF3H
chr2198267526198267547-CDS,intron-Distal4.343766.75238HepG2EIF3H
chr2198266813198266830-CDS,intron-Distal3.7831743.24600HepG2BCLAF1
chr2198266136198266147-CDS,intron-Distal3.216244.41856HepG2UCHL5
chr2198267279198267295-CDS,intron-Distal,intron-Proximal3.458484.60832HepG2UCHL5
chr2198273273198273306-CDS,intron-Distal,intron-Proximal3.463876.28780K562DDX24
chr2198267672198267690-CDS,intron-Distal,intron-Proximal3.107409.41073HepG2FASTKD2
chr2198264975198265015-CDS,intron-Distal,intron-Proximal3.9722312.94516HepG2EIF3H
chr2198257851198257908-CDS,intron-Distal3.592856.63722K562FMR1
chr2198262783198262802-CDS,intron-Distal5.0423963.99021HepG2BCLAF1
chr2198274530198274569-CDS,intron-Distal3.030863.51700K562FXR2
chr2198267514198267550-CDS,intron-Distal3.178708.56506HepG2FASTKD2
chr2198266468198266498-CDS,intron-Distal3.8865010.51594HepG2EIF3H
chr2198266830198266851-CDS,intron-Distal3.8657654.24896HepG2BCLAF1
chr2198270001198270022-CDS,intron-Distal4.8918055.99551HepG2BCLAF1
chr2198257154198257185-CDS,intron-Distal3.8380235.69652HepG2BCLAF1
chr2198267519198267551-CDS,intron-Distal,intron-Proximal4.107425.66736K562FMR1
chr2198265013198265025-CDS,intron-Distal4.195663.30425K562LIN28B
chr2198266848198266892-CDS,intron-Distal,intron-Proximal3.036988.59638HepG2SF3A3
chr2198265545198265573-CDS,intron-Distal4.9292753.51594HepG2BCLAF1
chr2198266124198266129-CDS,intron-Distal4.2857131.86069HepG2BCLAF1
chr2198281464198281487-CDS,intron-Distal,intron-Proximal4.7253429.09482K562YBX3
chr2198267419198267461-CDS,intron-Distal4.879835.09669K562FMR1
chr2198265119198265158-CDS,intron-Distal3.5747915.83977HepG2EIF3H
chr2198288541198288676-CDS,intron-Distal,intron-Proximal3.394547.84297K562ZNF800
chr2198267512198267546-CDS,intron-Distal4.2987479.21092HepG2BCLAF1
chr2198262802198262830-CDS,intron-Distal5.24023400.00000HepG2BCLAF1
chr2198263184198263209-CDS,intron-Distal,intron-Proximal3.295209.57754HepG2EIF3H
chr2198257695198257704-CDS,intron-Distal,intron-Proximal4.2598226.17524HepG2BCLAF1
chr2198266712198266756-CDS,intron-Distal,intron-Proximal5.1247612.74010HepG2EIF3H
chr2198267542198267550-CDS,intron-Distal3.1645414.64834HepG2HLTF
chr2198267547198267550-CDS,intron-Distal4.1400955.11594HepG2BCLAF1
chr2198260912198260952-CDS,intron-Distal3.4559711.31847K562YBX3
chr2198267279198267289-CDS,intron-Distal,intron-Proximal3.773189.65530HepG2HLTF
chr2198268473198268488-CDS,intron-Distal3.9090743.26239HepG2BCLAF1
chr2198273130198273180-CDS,intron-Distal3.0210413.48178HepG2GRWD1
chr2198273116198273130-CDS,intron-Distal3.034337.34722HepG2GRWD1
chr2198267416198267469-CDS,intron-Distal4.515687.90093K562FXR2
chr2198269998198270001-CDS,intron-Distal,intron-Proximal5.1352447.98733HepG2BCLAF1
chr2198274701198274731-CDS,intron-Distal3.5930815.42499HepG2GRWD1
chr2198267518198267550-CDS,intron-Distal5.433937.80708K562FXR2
chr2198267704198267751-CDS,intron-Distal4.060753.43526K562GRWD1
chr2198269799198269802-CDS,intron-Distal,intron-Proximal4.0888239.52786HepG2BCLAF1
chr2198264788198264849-CDS,intron-Distal3.160558.35380HepG2PPIG
chr2198272723198272737-CDS,intron-Distal3.405576.07514HepG2EIF3H
chr2198257140198257146-CDS,intron-Distal3.430184.70209K562YBX3
chr2198267671198267686-CDS,intron-Distal,intron-Proximal3.3830222.32275HepG2HLTF
chr2198268364198268429-CDS,intron-Distal3.258206.37916K562GRWD1
chr2198262830198262840-CDS,intron-Distal5.2041272.90714HepG2BCLAF1
chr2198266781198266838-CDS,intron-Distal4.115794.15208K562RBM15
chr2198268260198268310-CDS,intron-Distal,intron-Proximal3.500084.88100K562AQR
chr2198274652198274701-CDS,intron-Distal3.1725314.45614HepG2GRWD1
chr2198265121198265159-CDS,intron-Distal,intron-Proximal3.002193.04831K562RBM15
chr2198264979198264984-CDS,intron-Distal,intron-Proximal4.5032826.48690HepG2BCLAF1
chr2198265475198265501-CDS,intron-Distal5.6555380.65304HepG2BCLAF1
chr2198269864198269895-CDS,intron-Distal5.2212866.01729HepG2BCLAF1
chr2198268309198268336-CDS,intron-Distal3.012859.36612HepG2GRWD1
chr2198260923198260939-CDS,intron-Distal4.3884935.15288HepG2BCLAF1
chr2198274493198274515-CDS,intron-Distal,intron-Proximal3.099906.95570HepG2PPIG
chr2198266851198266854-CDS,intron-Distal4.0845936.60371HepG2BCLAF1
chr2198267672198267687-CDS,intron-Distal,intron-Proximal3.873959.40911HepG2PPIG
chr2198288543198288591-CDS,intron-Distal,intron-Proximal4.0121610.50605HepG2ZNF800
chr2198264830198264890-CDS,intron-Distal,intron-Proximal4.541086.46853K562EFTUD2
chr2198272721198272757-CDS,intron-Distal,intron-Proximal5.1167211.22983HepG2ZNF800
chr2198288599198288698-CDS,intron-Distal,intron-Proximal3.1394610.27733K562GRWD1
chr2198267187198267225-intron-Distal,intron-Proximal3.213554.23685HepG2CDC40
chr2198272993198273039-intron-Distal,intron-Proximal4.768383.62536K562AQR
chr2198283459198283512-intron-Distal,intron-Proximal3.3894226.09824HepG2KHSRP
chr2198266880198266941-intron-Distal,intron-Proximal3.175525.34873K562KHSRP
chr2198266418198266460-intron-Distal,intron-Proximal4.708594.13847K562AQR
chr2198283457198283494-intron-Distal,intron-Proximal4.1037528.77168HepG2U2AF2
chr2198299433198299500-intron-Distal5.371426.79042K562XRCC6
chr2198283494198283510-intron-Distal,intron-Proximal4.0379625.74836HepG2U2AF2
chr2198267228198267243-intron-Distal,intron-Proximal3.692244.11859HepG2PRPF8
chr2198299517198299624-intron-Distal4.121436.55815K562FMR1
chr2198283457198283515-intron-Distal,intron-Proximal5.5135837.60461K562KHSRP
chr2198262969198263084-intron-Distal3.508313.59771HepG2QKI
chr2198267188198267228-intron-Distal,intron-Proximal3.294906.12954HepG2PRPF8
chr2198299424198299474-intron-Distal3.843017.96432HepG2XRCC6
chr2198279167198279240-intron-Distal4.254323.55787K562PTBP1
chr2198279131198279251-intron-Distal3.846764.28254HepG2MATR3
chr2198267841198267924-intron-Distal,intron-Proximal4.245034.17759HepG2QKI
chr2198267194198267244-intron-Distal,intron-Proximal3.647136.41318K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




No autoregularoty interactions between protein SF3B1 and its RNA.



Diffrential Expression

  • 9,459 differentially expressed genes after Knockdown/Knockout SF3B1 protein.  





  • 98 RBPs can affect the levels of SF3B1.  







9,459 differentially expressed genes after Knockdown/Knockout SF3B1 protein :

Only display 100 entries as example. Please click "View All" button to see all 9,459 entries.     

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TSPAN6ENSG00000000003.10674.70590881.31640-0.385402.658801.96760HepG2SF3B1
SCYL3ENSG00000000457.9211.93000129.291900.712903.135802.38610HepG2SF3B1
C1orf112ENSG00000000460.12130.90050230.30890-0.815104.141003.29450HepG2SF3B1
GCLCENSG00000001084.65267.940401338.639701.9764077.8200074.98510HepG2SF3B1
NFYAENSG00000001167.101298.634601898.94450-0.548206.413105.37600HepG2SF3B1
LAS1LENSG00000001497.12379.18010727.85850-0.9408010.909509.59510HepG2SF3B1
SEMA3FENSG00000001617.7366.10880633.59920-0.791307.513606.40080HepG2SF3B1
CYP51A1ENSG00000001630.115563.102804288.282300.375403.901703.07600HepG2SF3B1
MYH16ENSG00000002079.81.6076013.71100-3.092302.140401.51430HepG2SF3B1
LAP3ENSG00000002549.81333.651501819.43730-0.448104.433003.55900HepG2SF3B1
CD99ENSG00000002586.133202.275102610.281300.294802.377601.72140HepG2SF3B1
MAD1L1ENSG00000002822.11317.04440581.33740-0.874708.588907.41070HepG2SF3B1
LASP1ENSG00000002834.134419.190906947.02320-0.6526011.037309.71590HepG2SF3B1
SNX11ENSG00000002919.10172.74520110.332400.646702.343801.69200HepG2SF3B1
CYP26B1ENSG00000003137.44.0512026.24030-2.695403.583902.78940HepG2SF3B1
ALS2ENSG00000003393.102481.515801145.765301.1148024.5336022.67510HepG2SF3B1
CASP10ENSG00000003400.10427.86440316.709500.433902.177101.54640HepG2SF3B1
TFPIENSG00000003436.1011794.796808139.359300.535107.891406.75480HepG2SF3B1
MTMR7ENSG00000003987.922.489002.239303.328003.886603.06240HepG2SF3B1
SLC7A2ENSG00000003989.125356.487402151.019201.3162038.7506036.50810HepG2SF3B1
ARF5ENSG00000004059.61174.44540900.146900.383602.898202.17600HepG2SF3B1
SARM1ENSG00000004139.950.6368014.136801.840604.053803.21500HepG2SF3B1
PLXND1ENSG00000004399.8862.305602348.03330-1.4452037.5021035.28810HepG2SF3B1
AK2ENSG00000004455.121634.315902211.42760-0.436303.942303.11220HepG2SF3B1
KDM1AENSG00000004487.112147.874802755.97880-0.359703.367902.59700HepG2SF3B1
RBM6ENSG00000004534.104526.199303403.147200.411304.510503.62630HepG2SF3B1
RECQLENSG00000004700.11402.42320908.79330-1.1752017.8529016.22690HepG2SF3B1
CDC27ENSG00000004897.73972.467104799.70490-0.272902.259301.61910HepG2SF3B1
SKAP2ENSG00000005020.8600.70900890.01530-0.567202.291301.64660HepG2SF3B1
LIG3ENSG00000005156.7533.522501077.49820-1.0141015.0665013.56350HepG2SF3B1
ACSM3ENSG00000005187.7714.91380517.591200.465903.272802.51080HepG2SF3B1
CREBBPENSG00000005339.84129.820603074.503000.425604.758503.85390HepG2SF3B1
PON1ENSG00000005421.444.060303.626903.602607.977306.83630HepG2SF3B1
GCFC2ENSG00000005436.9783.84240486.434800.688206.771905.70940HepG2SF3B1
WDR54ENSG00000005448.1215.3045052.57650-1.780503.926903.09810HepG2SF3B1
CROTENSG00000005469.7341.24050221.682800.622203.566502.77360HepG2SF3B1
ABCB4ENSG00000005471.11760.87390420.502900.855409.447608.21990HepG2SF3B1
RHBDD2ENSG00000005486.12835.92340461.415900.857203.612602.81550HepG2SF3B1
MYCBP2ENSG00000005810.131280.641301607.96140-0.328402.534901.85770HepG2SF3B1
ITGALENSG00000005844.13174.1365036.475202.2551013.6699012.22370HepG2SF3B1
ITGA3ENSG00000005884.1314.36910338.32260-4.5574017.0471015.45750HepG2SF3B1
ZFXENSG00000005889.111930.89970623.198101.6314043.8004041.43840HepG2SF3B1
LAMP2ENSG00000005893.111906.154302489.34800-0.385103.654302.85250HepG2SF3B1
ASB4ENSG00000005981.820.37280267.72030-3.7160027.1557025.21760HepG2SF3B1
CRLF1ENSG00000006016.6415.962302909.70540-2.8063063.8642061.21390HepG2SF3B1
MAP3K14ENSG00000006062.9199.3205083.900301.248207.393206.28910HepG2SF3B1
SYNRGENSG00000006114.111058.70320842.325600.329702.268901.62720HepG2SF3B1
ZNF263ENSG00000006194.6766.29880487.353100.652805.854604.86180HepG2SF3B1
SPATA20ENSG00000006282.15456.222901268.81880-1.4757030.2800028.24000HepG2SF3B1
TNFRSF12AENSG00000006327.9734.70210394.647600.8965010.246408.96640HepG2SF3B1
AGKENSG00000006530.11302.64610634.01100-1.0669012.3146010.92550HepG2SF3B1
ALDH3B1ENSG00000006534.1121.89860125.21100-2.5155013.0973011.67440HepG2SF3B1
PHTF2ENSG00000006576.12184.55980474.23540-1.3615010.855009.54370HepG2SF3B1
FARP2ENSG00000006607.91120.68680796.041300.493404.434503.56010HepG2SF3B1
GGCTENSG00000006625.13393.12250760.76060-0.9525011.5013010.15530HepG2SF3B1
DBF4ENSG00000006634.3596.576001035.47010-0.795509.876308.61550HepG2SF3B1
IFRD1ENSG00000006652.9917.10460696.301900.397302.908502.18460HepG2SF3B1
PAF1ENSG00000006712.101403.193701842.59810-0.393003.664702.86180HepG2SF3B1
VPS41ENSG00000006715.11986.19690753.275200.388602.901902.17890HepG2SF3B1
ELAC2ENSG00000006744.14714.224001012.21340-0.503104.402703.53030HepG2SF3B1
PNPLA4ENSG00000006757.7342.02970212.669200.685404.098003.25500HepG2SF3B1
ADIPOR2ENSG00000006831.91844.124001309.425000.493905.192304.24760HepG2SF3B1
UPP2ENSG00000007001.836.466501.387604.715805.946104.94430HepG2SF3B1
PROM1ENSG00000007062.7380.40770498.46910-0.390002.149501.52250HepG2SF3B1
SCN4AENSG00000007314.71.6895015.30450-3.179302.525001.84900HepG2SF3B1
PAX6ENSG00000007372.1617.9293078.26800-2.126103.775902.96340HepG2SF3B1
BAIAP3ENSG00000007516.9109.3469066.933300.708001.988201.38480HepG2SF3B1
PIGQENSG00000007541.10120.61770181.97840-0.593302.034701.42440HepG2SF3B1
TEAD3ENSG00000007866.141443.372701095.453800.397803.437902.65930HepG2SF3B1
DNAJC11ENSG00000007923.111304.527501739.74200-0.415303.761102.95030HepG2SF3B1
MYLIPENSG00000007944.1048.9825092.32180-0.914402.351101.69840HepG2SF3B1
E2F2ENSG00000007968.6123.18980198.14740-0.685702.900002.17750HepG2SF3B1
JARID2ENSG00000008083.9985.097901254.25860-0.348502.512901.83870HepG2SF3B1
SYPL1ENSG00000008282.31384.644801080.371700.357902.782402.07390HepG2SF3B1
SPAG9ENSG00000008294.163274.372402255.437800.537706.983405.90380HepG2SF3B1
CELSR3ENSG00000008300.10864.46850683.192100.339402.133701.50850HepG2SF3B1
AASSENSG00000008311.10296.45530668.96060-1.1741015.3264013.80890HepG2SF3B1
PLEKHG6ENSG00000008323.11354.69770125.347901.5006011.6023010.25050HepG2SF3B1
CRY1ENSG00000008405.7283.61780382.62730-0.432002.062201.44760HepG2SF3B1
IL32ENSG00000008517.123547.257202426.969900.547406.839805.77210HepG2SF3B1
PKD1ENSG00000008710.131171.02570525.982101.154606.869005.79760HepG2SF3B1
MAPK8IP2ENSG00000008735.10150.8933089.917500.746802.604001.91860HepG2SF3B1
UBE3CENSG00000009335.131777.802601098.368300.694609.565808.32980HepG2SF3B1
MASP2ENSG00000009724.12447.25510222.340201.008208.977807.77610HepG2SF3B1
FAM76AENSG00000009780.11257.77910152.468000.757503.942503.11220HepG2SF3B1
MLXIPLENSG00000009950.117491.471204180.420800.8415017.5077015.89950HepG2SF3B1
BAZ1BENSG00000009954.63691.018404955.01100-0.424904.951604.02950HepG2SF3B1
RANBP9ENSG00000010017.91607.202802180.11730-0.439903.054902.31400HepG2SF3B1
METTL13ENSG00000010165.15274.08910386.80290-0.497002.590801.90670HepG2SF3B1
ZNF207ENSG00000010244.123548.969904404.21960-0.311502.816202.10360HepG2SF3B1
NCAPD2ENSG00000010292.81671.325902811.61080-0.750405.450804.48590HepG2SF3B1
IFFO1ENSG00000010295.15521.47430347.896500.583804.238203.38210HepG2SF3B1
SEMA3GENSG00000010319.2594.72880346.204600.780507.053705.97090HepG2SF3B1
SCMH1ENSG00000010803.121553.286501218.740100.349802.771302.06400HepG2SF3B1
FYNENSG00000010810.13668.45670928.48050-0.474003.801002.98510HepG2SF3B1
HIVEP2ENSG00000010818.41103.62860850.908400.375102.503101.83000HepG2SF3B1
TCEB3ENSG00000011007.81961.567001596.712200.296802.209701.57440HepG2SF3B1
CLCN6ENSG00000011021.171666.222901294.603900.364002.446701.78110HepG2SF3B1
NME2ENSG00000011052.17160.5801050.543001.667602.616801.93020HepG2SF3B1
TSPAN9ENSG00000011105.71017.61850352.153901.5308023.3522021.53120HepG2SF3B1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





98 RBPs can affect the gene expression of SF3B1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SF3B1ENSG00000115524.1111602.6460013714.63990-0.241305.177404.39730HepG2ACO1
SF3B1ENSG00000115524.1110504.9470015757.50940-0.585006.283105.51910HepG2AKAP1
SF3B1ENSG00000115524.1110800.2437013038.18320-0.271702.016301.34180HepG2ASCC1
SF3B1ENSG00000115524.1113098.7777017065.51750-0.381708.751007.72860HepG2CELF1
SF3B1ENSG00000115524.1110291.8114012854.46590-0.320803.508202.75230HepG2DDX21
SF3B1ENSG00000115524.119314.8669015094.86080-0.6965010.104108.97420HepG2DDX3X
SF3B1ENSG00000115524.1113228.4193010685.373100.307903.243302.18500HepG2DHX30
SF3B1ENSG00000115524.119497.0624011078.59900-0.222203.068102.33210HepG2DNAJC21
SF3B1ENSG00000115524.1118916.2074012465.323500.601607.983407.01230HepG2EIF2S1
SF3B1ENSG00000115524.1114393.809607714.323700.8997024.7405022.50720HepG2FUBP3
SF3B1ENSG00000115524.1116128.3852012893.294800.322902.471701.84080HepG2G3BP1
SF3B1ENSG00000115524.1118953.3807013687.041700.469505.474904.20830HepG2G3BP2
SF3B1ENSG00000115524.117192.346608650.89510-0.266402.126201.34570HepG2GEMIN5
SF3B1ENSG00000115524.1110745.4142013668.55110-0.347102.257601.34190HepG2GNB2L1
SF3B1ENSG00000115524.116441.1214011174.07800-0.7948012.0625010.80950HepG2GPKOW
SF3B1ENSG00000115524.119412.3157012441.05640-0.402505.293804.35860HepG2HNRNPC
SF3B1ENSG00000115524.1118988.7629013054.121900.540508.128206.97990HepG2HNRNPK
SF3B1ENSG00000115524.1114274.9959016715.20710-0.227706.119105.15160HepG2HNRNPL
SF3B1ENSG00000115524.117477.0802012358.79600-0.7250034.7000032.77040HepG2HNRNPU
SF3B1ENSG00000115524.1112187.2087018139.93680-0.573805.446203.69610HepG2KHDRBS1
SF3B1ENSG00000115524.1117400.7895013181.948900.400502.884401.85750HepG2KHSRP
SF3B1ENSG00000115524.1113070.9982017367.14820-0.410003.031102.15840HepG2LARP4
SF3B1ENSG00000115524.1111411.2490013981.09330-0.293002.007401.46540HepG2MATR3
SF3B1ENSG00000115524.118653.6945010877.61440-0.330004.024103.05400HepG2MSI2
SF3B1ENSG00000115524.1111840.447809133.983500.374304.573303.01220HepG2NAA15
SF3B1ENSG00000115524.118180.3139014310.58870-0.8069012.6354011.33710HepG2NCBP2
SF3B1ENSG00000115524.1114741.8657018195.52900-0.303704.603803.61990HepG2NOL12
SF3B1ENSG00000115524.1111427.801109455.272100.273302.450501.74590HepG2NSUN2
SF3B1ENSG00000115524.1110632.2617017399.77510-0.710604.959003.74280HepG2PABPC1
SF3B1ENSG00000115524.1115661.7918012745.258000.297202.270601.61140HepG2PABPC4
SF3B1ENSG00000115524.1114134.9310012765.116700.147002.064401.52750HepG2PCBP1
SF3B1ENSG00000115524.1111821.881709787.943000.272305.003503.99510HepG2PRPF4
SF3B1ENSG00000115524.1110470.223308199.004300.352703.519702.61930HepG2PRPF8
SF3B1ENSG00000115524.1111267.6684012989.41240-0.205103.157802.58100HepG2PTBP1
SF3B1ENSG00000115524.1112913.3332017369.19990-0.427706.302205.45100HepG2PUF60
SF3B1ENSG00000115524.1116137.1012018438.14300-0.192304.547703.82760HepG2PUM1
SF3B1ENSG00000115524.1110884.2919013969.24050-0.3600010.682009.60770HepG2PUS1
SF3B1ENSG00000115524.1118961.8048014066.940300.430709.230008.18740HepG2QKI
SF3B1ENSG00000115524.1118224.0077012766.997800.513305.529104.60660HepG2RBM25
SF3B1ENSG00000115524.1116590.4806013464.084800.301107.247306.32040HepG2RECQL
SF3B1ENSG00000115524.1110635.7934012859.84840-0.273902.850602.15870HepG2RPLP0
SF3B1ENSG00000115524.116748.419609453.56030-0.486306.800205.88480HepG2RPS19
SF3B1ENSG00000115524.1114910.0215019116.35620-0.358502.220601.50390HepG2RPS3A
SF3B1ENSG00000115524.1111171.844308110.664500.461904.780603.77970HepG2RRP9
SF3B1ENSG00000115524.113551.0685010554.93030-1.5716058.6912056.11730HepG2SF3B1
SF3B1ENSG00000115524.1118790.5769016654.294200.174003.684802.89400HepG2SLBP
SF3B1ENSG00000115524.119785.0228012834.74640-0.3914016.9147015.52900HepG2SMN1
SF3B1ENSG00000115524.1127125.5889020074.964800.4342017.2373016.26760HepG2SRFBP1
SF3B1ENSG00000115524.1118949.3398014115.279000.4248015.3767014.45440HepG2SRSF1
SF3B1ENSG00000115524.1114759.3992017149.51930-0.216503.806503.09390HepG2SRSF5
SF3B1ENSG00000115524.119944.7814011727.93790-0.237904.462703.61140HepG2SRSF7
SF3B1ENSG00000115524.1113289.1344011483.801700.210503.995203.35550HepG2SRSF9
SF3B1ENSG00000115524.1119137.8075017429.936000.134801.925901.47820HepG2SSB
SF3B1ENSG00000115524.1115697.0005019503.75850-0.313309.714008.66890HepG2SUCLG1
SF3B1ENSG00000115524.1121024.6944012688.234200.7285026.9830025.46810HepG2TAF15
SF3B1ENSG00000115524.1118491.1092011657.834500.665408.880307.39990HepG2TIA1
SF3B1ENSG00000115524.1110869.7169012116.25520-0.156602.040101.54190HepG2TRIM56
SF3B1ENSG00000115524.117662.113106249.604300.293902.474101.75590HepG2UCHL5
SF3B1ENSG00000115524.1112176.6471013965.69100-0.197803.568402.79180HepG2UPF1
SF3B1ENSG00000115524.1110854.6294013483.34350-0.312907.998607.06470HepG2UTP3
SF3B1ENSG00000115524.1112835.0035017122.59970-0.415802.696101.61720HepG2XPO5
SF3B1ENSG00000115524.1111697.432709659.511600.276107.369706.36040HepG2ZC3H8
SF3B1ENSG00000115524.1111562.073208811.487700.3918011.1292010.08650K562AGGF1
SF3B1ENSG00000115524.1111134.441009168.795600.280102.828002.16720K562AKAP8L
SF3B1ENSG00000115524.1111203.822709620.355500.219702.889001.95710K562ATP5C1
SF3B1ENSG00000115524.116186.395407032.29450-0.184902.664301.72210K562BCLAF1
SF3B1ENSG00000115524.112684.504803267.72040-0.283602.285601.34410K562CCAR1
SF3B1ENSG00000115524.115564.777607090.42650-0.349504.612303.60090K562CPSF6
SF3B1ENSG00000115524.115748.418506788.68740-0.240002.233401.30570K562DDX3X
SF3B1ENSG00000115524.117745.666109866.00960-0.349106.281004.87680K562DKC1
SF3B1ENSG00000115524.116791.022508307.85890-0.290804.786403.87370K562EIF2S2
SF3B1ENSG00000115524.115441.362707092.64840-0.382403.758002.80580K562EIF4A3
SF3B1ENSG00000115524.116451.714107819.78030-0.277402.506201.70000K562FIP1L1
SF3B1ENSG00000115524.115959.765007214.24410-0.275602.312501.52900K562FMR1
SF3B1ENSG00000115524.117034.958705884.573500.257502.787001.44110K562FUS
SF3B1ENSG00000115524.1111057.659907999.369400.467003.549802.72600K562G3BP2
SF3B1ENSG00000115524.114012.861406769.65230-0.7545015.8625013.92020K562GPKOW
SF3B1ENSG00000115524.117947.0712011071.00900-0.478308.011806.71410K562GRSF1
SF3B1ENSG00000115524.113684.288606120.80160-0.732308.979807.95560K562HNRNPC
SF3B1ENSG00000115524.1111679.760209151.486600.351803.217001.87390K562HNRNPK
SF3B1ENSG00000115524.118294.1140010602.08780-0.354203.795802.86800K562HSPD1
SF3B1ENSG00000115524.1112450.377009730.232100.355504.296703.23820K562KIF1C
SF3B1ENSG00000115524.117380.011509629.32180-0.383804.919303.79060K562MAGOH
SF3B1ENSG00000115524.117300.600509610.04410-0.396505.543504.17450K562MATR3
SF3B1ENSG00000115524.1112797.0418010900.338900.231302.253601.44660K562MBNL1
SF3B1ENSG00000115524.115587.268206607.91920-0.242102.271401.47930K562METAP2
SF3B1ENSG00000115524.116905.959207795.22360-0.174702.695401.89680K562MTPAP
SF3B1ENSG00000115524.1111174.609207640.361500.548402.269201.48970K562NAA15
SF3B1ENSG00000115524.117993.316208661.11870-0.115802.059001.40390K562NSUN2
SF3B1ENSG00000115524.114764.374205556.21400-0.221802.066501.37530K562POLR2G
SF3B1ENSG00000115524.117228.510708876.86800-0.296402.658101.85820K562PPIG
SF3B1ENSG00000115524.117778.463506168.805600.334403.317302.49360K562PRPF8
SF3B1ENSG00000115524.113997.053605487.69960-0.457302.720901.82550K562PSIP1
SF3B1ENSG00000115524.117085.015009355.36280-0.401005.850404.91410K562PTBP1
SF3B1ENSG00000115524.1114618.0045017016.11200-0.219203.177602.14910K562PUM2
SF3B1ENSG00000115524.1114648.684509092.620800.6879012.4687011.36270K562PUS1
SF3B1ENSG00000115524.1112516.071608859.644900.4984012.0384010.80390K562RBM15
SF3B1ENSG00000115524.117530.598508971.60000-0.252602.123601.39170K562RBM22
SF3B1ENSG00000115524.119948.247207586.820000.390805.259203.33890K562RBM25
SF3B1ENSG00000115524.114017.726705005.65780-0.317203.007601.97150K562RCC2
SF3B1ENSG00000115524.115666.111407451.60400-0.395202.888301.86340K562RPS3
SF3B1ENSG00000115524.119986.906708546.425000.224603.242702.36260K562SF3A3
SF3B1ENSG00000115524.112955.223906438.03430-1.1234021.8358019.10790K562SF3B1
SF3B1ENSG00000115524.119772.094308317.351100.232402.507601.69580K562SF3B4
SF3B1ENSG00000115524.1110984.430107127.250300.623902.619701.43610K562SNRNP200
SF3B1ENSG00000115524.115310.796907194.52430-0.438004.957003.47890K562SRSF4
SF3B1ENSG00000115524.114735.444805973.42280-0.335102.451401.49990K562SUPV3L1
SF3B1ENSG00000115524.116745.753109282.24640-0.460505.372404.36930K562TARDBP
SF3B1ENSG00000115524.117137.106308953.66740-0.327104.268903.21970K562TIA1
SF3B1ENSG00000115524.119862.754507753.329500.347102.653001.58590K562U2AF1
SF3B1ENSG00000115524.1110361.071608007.717400.371605.655904.50700K562U2AF2
SF3B1ENSG00000115524.115179.834906436.80760-0.313402.496501.36660K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





1,295 alternative splicing events after Knockdown/Knockout SF3B1 protein :

Only display 100 entries as example. Please click "View All" button to see all 1,295 entries.     

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENT5DC2ENSG00000168268.6chr3-5256617852566411525631655256335052567521525677930.155000.000000.00000includedK562SF3B1
SEDGUOKENSG00000114956.15chr2+7415972474159810741540237415417974173845741740150.080000.002580.08250includedK562SF3B1
SEEPB41L2ENSG00000079819.12chr6-1311992431311993901311907021311912661312062351312064080.238000.000080.00519includedK562SF3B1
SECARM1ENSG00000142453.7chr19+1101922511019344110187141101882111019778110198830.088000.001450.05367includedK562SF3B1
SEHEPHENSG00000089472.12chrX+6548200565482183654799416548010465483485654835300.096000.000000.00001includedK562SF3B1
SENDUFA3ENSG00000170906.11chr19+5460890354609010546064215460649654609240546093180.073000.000000.00011includedK562SF3B1
SECCDC41ENSG00000173588.10chr12-9472198094722084947066899470679394725475947256050.096000.002070.07023includedK562SF3B1
SESNRNP70ENSG00000104852.10chr19+4960537049606844496046464960472849607890496079920.223000.000000.00000includedK562SF3B1
SEASCC2ENSG00000100325.10chr22-3022952930229603302282333022833130234166302342170.445000.000990.03982includedK562SF3B1
SEZCCHC17ENSG00000121766.10chr1+3179101331791083317828903178301131791955317920130.168000.000080.00534includedK562SF3B1
SELUC7L3ENSG00000108848.11chr17+4882863548828723488278614882805548829560488299460.058000.000330.01720includedK562SF3B1
SEPUM2ENSG00000055917.11chr2-2052602120526146205182972051840620527070205271390.128000.002170.07247includedK562SF3B1
SETSEN15ENSG00000198860.7chr1+1840397491840398661840238611840239971840412901840414440.288000.000000.00016includedK562SF3B1
SEATXN2ENSG00000204842.10chr12-1119024651119025191118950171118951631119079111119080440.113000.001320.05040includedK562SF3B1
SEDRG1ENSG00000185721.7chr22+3181729331817385318162413181641131819265318193050.082000.002980.09133includedK562SF3B1
SETBC1D17ENSG00000104946.6chr19+5038257950382761503817545038182950383535503836590.209000.002070.07023includedK562SF3B1
SETMEM50BENSG00000142188.12chr21-3482831034828404348280333482809134832719348328120.052000.000000.00009includedK562SF3B1
SERP11-580I16.2ENSG00000263766.1chr17-4570391245703993456992074569945345713877457139670.359000.000070.00482includedK562SF3B1
SENSUN6ENSG00000241058.1chr10-1893249718932569189314041893148418937418189375740.219000.000000.00000includedK562SF3B1
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.169000.001600.05770includedK562SF3B1
SEC1orf43ENSG00000143612.14chr1-1541923111541924361541869321541870501541928171541930820.141000.002930.09047includedK562SF3B1
SELPIN2ENSG00000101577.5chr18-3011715301195729606462960847301308430133130.250000.003250.09733includedK562SF3B1
SEZNF207ENSG00000010244.12chr17+3069368330693776306923483069250630694790306950330.105000.000040.00325includedK562SF3B1
SESTAU2ENSG00000040341.13chr8-7447364574473774744641307446455474495004744950650.061000.000010.00081includedK562SF3B1
SECIZ1ENSG00000148337.15chr9-1309478251309480551309429991309430781309526071309527230.055000.000200.01172includedK562SF3B1
SESERPINB1ENSG00000021355.8chr6-2839568283970028387822838920284065228408280.069000.002200.07319includedK562SF3B1
SEPSMD6ENSG00000163636.6chr3-6400831864008477640079936400819964008950640091480.100000.000600.02705includedK562SF3B1
SETRA2AENSG00000164548.6chr7-2357079923570889235617502356205123571407235716210.098000.000000.00015includedK562SF3B1
SESREK1ENSG00000153914.11chr5+6546043565460528654596196545975065460610654607250.078000.000070.00508includedK562SF3B1
SESREK1ENSG00000153914.11chr5+6545189265454760654492906544942465455046654551620.270000.000000.00000includedK562SF3B1
SEWNK1ENSG00000060237.12chr12+9770319782709712489714369804309805140.218000.000000.00001includedK562SF3B1
SEWNK1ENSG00000060237.12chr12+9887389891979873779875279898869901650.374000.000000.00048includedK562SF3B1
SEKATNBL1ENSG00000134152.6chr15-3447002134470200344557603445589134502151345022800.213000.002570.08240includedK562SF3B1
SEPICALMENSG00000073921.13chr11-8570129285701442856949088569501685707868857079720.107000.000450.02168includedK562SF3B1
SEFUBP3ENSG00000107164.15chr9+1334859131334859901334853431334853741334878421334878920.353000.000500.02344includedK562SF3B1
SEFUBP3ENSG00000107164.15chr9+1335065471335066801335060141335061751335069431335070170.083000.000000.00025includedK562SF3B1
SERHOT1ENSG00000126858.12chr17+3049995530500079304980613049812030500849305009310.135000.000000.00000includedK562SF3B1
SETOP3BENSG00000100038.15chr22-2233035222330559223300112233017922337126223371840.146000.000480.02278includedK562SF3B1
SEDPY19L3ENSG00000178904.14chr19+3292984832929916329280993292824532930017329301410.205000.000000.00000includedK562SF3B1
SELCORLENSG00000178177.10chr4-1796459217964672179635251796365517974442179745080.182000.001900.06595includedK562SF3B1
SEDCAF6ENSG00000143164.11chr1+1679922251679922851679737701679740311680076081680077260.201000.000010.00109includedK562SF3B1
SEUQCRC2ENSG00000140740.6chr16+2197264821972786219698552196992021973780219738310.077000.000000.00000includedK562SF3B1
SEUSP9XENSG00000124486.8chrX+4106031241060533410579194105800341064555410647460.081000.000760.03236includedK562SF3B1
SENSFL1CENSG00000088833.13chr20-1426639142679414263101426475143313714332950.150000.000000.00002includedK562SF3B1
SENSFL1CENSG00000088833.13chr20-1443979144408614388441438919144497314450710.145000.002160.07238includedK562SF3B1
SENOL8ENSG00000198000.7chr9-9508222495082419950815029508163895083949950840280.109000.001140.04479includedK562SF3B1
SERBM3ENSG00000102317.13chrX+4843420248434471484339484843405548434701484348070.066000.000000.00001includedK562SF3B1
SEUBE2Q2ENSG00000140367.7chr15+7615221876152323761467267614682876161291761613510.169000.000000.00006includedK562SF3B1
SEHERC1ENSG00000103657.9chr15-6396518463965278639646946396489363966540639673160.090000.000000.00000includedK562SF3B1
SEMRRFENSG00000148187.13chr9+1250483171250484451250474471250475661250540271250540770.367000.000070.00484includedK562SF3B1
SECCNL2ENSG00000221978.7chr1-1326676132695513261451326245132805813280960.520000.002480.08057includedK562SF3B1
SESRSF6ENSG00000124193.10chr20+4208779242088060420870004208714942088410420885350.230000.000010.00094includedK562SF3B1
SEMAGI1ENSG00000151276.19chr3-6536141965361587653505276535062165364935653652290.144000.000350.01803includedK562SF3B1
SEGOLIM4ENSG00000173905.4chr3-1677585731677586571677546231677547821677591791677592620.261000.000210.01192includedK562SF3B1
SECPED1ENSG00000106034.13chr7+1208848951208850631208842551208843921209062801209065010.080000.000000.00000includedK562SF3B1
SEHMBOX1ENSG00000147421.13chr8+2886889028869036288665882886669928876276288764300.073000.001320.05040includedK562SF3B1
SELPGAT1ENSG00000123684.8chr1-2119609732119610692119565702119568442119664132119665320.091000.000710.03067includedK562SF3B1
SEHNRNPDENSG00000138668.14chr4-8327604783276154832749868327530783276456832765540.064000.000000.00001includedK562SF3B1
SESLAIN2ENSG00000109171.10chr4+4839659248396670483856634838580148422141484224600.165000.000000.00004includedK562SF3B1
SENDUFV1ENSG00000167792.7chr11+6737476967375087673744316737454767375866673759890.092000.000000.00002includedK562SF3B1
SER3HDM1ENSG00000048991.12chr2+1363991051363993601363964651363966921364029481364030970.158000.000030.00204includedK562SF3B1
SEGDAENSG00000119125.12chr9+7477695274777167747295107472974974810415748105040.121000.000950.03847includedK562SF3B1
SECDCA7ENSG00000144354.9chr2+1742287271742288891742285451742286231742295221742296010.127000.000320.01696includedK562SF3B1
SETBC1D9BENSG00000197226.8chr5-1792941751792943831792928371792928881792947771792948490.161000.000000.00015includedK562SF3B1
SEGTDC1ENSG00000121964.10chr2-1449685801449688041449661691449663711449690811449691460.157000.000050.00338includedK562SF3B1
SECDC42BPAENSG00000143776.14chr1-2271985782271987642271926942271928122272037802272038980.055000.000000.00009includedK562SF3B1
SERNMTENSG00000101654.13chr18+1375994013760207137541121375414613762037137623430.470000.001670.05952includedK562SF3B1
SEPEX6ENSG00000124587.9chr6-4294174042941824429376224293772542942612429427760.189000.001410.05285includedK562SF3B1
SEMTMR14ENSG00000163719.14chr3+9695084969520396911459691426969530496954530.087000.002050.06977includedK562SF3B1
SEWDR61ENSG00000140395.4chr15-7858118478581259785806807858072478581960785820540.060000.001710.06069includedK562SF3B1
SENDEL1ENSG00000166579.11chr17+8347244834749483392398339363834757783476750.122000.000540.02484includedK562SF3B1
SERNPS1ENSG00000205937.7chr16-2314573231476123141762314332231805523184130.060000.002260.07466includedK562SF3B1
SEBRD9ENSG00000028310.13chr5-8693598695098655288656968705878706900.201000.000440.02144includedK562SF3B1
SERP11-669N7.2ENSG00000249196.2chr12+1295959641295960601295955371295956841295976091295978380.101000.002210.07361includedK562SF3B1
SEZFAND6ENSG00000086666.14chr15+8039075780390920803519098035215180412669804128400.283000.000000.00008includedK562SF3B1
SEBPTFENSG00000171634.12chr17+6587167165871860658709326587113665887959658881500.197000.001590.05735includedK562SF3B1
SECIB2ENSG00000136425.8chr15-7841604678416081784035067840361878423506784238860.186000.000120.00737includedK562SF3B1
SEGS1-179L18.1ENSG00000205628.2chr7-5384418053844321538331755383392053847638538477310.555000.001040.04159includedK562SF3B1
SEHNRNPCENSG00000092199.13chr14-2173182521731988217314692173149521737456217375650.170000.000000.00001includedK562SF3B1
SETMX2ENSG00000213593.5chr11+5750613557506242575050795750514057506602575067320.647000.002590.08274includedK562SF3B1
SEHNRNPDLENSG00000152795.13chr4-8334671583346820833457818334603683347189833472820.105000.000010.00077includedK562SF3B1
SEGGPS1ENSG00000152904.7chr1+2354985562354986492354918842354920932355050222355050930.053000.002510.08111includedK562SF3B1
SESMPD4ENSG00000136699.15chr2-1309187581309188451309149331309149691309219461309220180.192000.000250.01372includedK562SF3B1
SESPTA1ENSG00000163554.7chr1-1586203461586204761586196451586197371586211561586212580.157000.000090.00603includedK562SF3B1
SEZNF766ENSG00000196214.6chr19+5278536352785490527728455277288452786537527866660.329000.000340.01751includedK562SF3B1
SEPPP1R12BENSG00000077157.16chr1+2024141732024143562024116532024117002024181162024182250.171000.000310.01626includedK562SF3B1
SERNPC3ENSG00000185946.11chr1+1040795371040796721040787471040788161040799631040801060.053000.000210.01213includedK562SF3B1
SEPLXNB2ENSG00000196576.10chr22-5071456250714656507143175071439250715057507151330.092000.000740.03171includedK562SF3B1
SESRSF10ENSG00000188529.10chr1-2429782724297929242929342429421324298062242981510.065000.000200.01145includedK562SF3B1
SEBNIP2ENSG00000140299.7chr15-5995754859957641599550915995631959960301599603370.200000.002140.07184includedK562SF3B1
SETPP2ENSG00000134900.7chr13+1032890441032891131032885731032887421032894311032895890.127000.000640.02832includedK562SF3B1
SEACADMENSG00000117054.9chr1+7625238476252550762517177625195976253181762532600.123000.000690.03015includedK562SF3B1
SEC11orf30ENSG00000158636.12chr11+7617097676171129761692267616940276174864761751240.124000.003020.09231includedK562SF3B1
SEPET100ENSG00000229833.5chr19+7696117769620776957087695732769635876965100.090000.000000.00000includedK562SF3B1
SEBMI1ENSG00000168283.9chr10+2261494922615005226145982261465122615359226157600.440000.002540.08185includedK562SF3B1
SEINTS12ENSG00000138785.10chr4-1066290751066293191066210061066211711066297941066298400.253000.000050.00375includedK562SF3B1
SEKAT6AENSG00000083168.5chr8-4190713741907225419058954190682041909418419095050.588000.001290.04978includedK562SF3B1
SESLC50A1ENSG00000169241.13chr1+1551093031551094271551087741551088521551104541551105740.181000.001910.06604includedK562SF3B1
SEPIEZO1ENSG00000103335.15chr16-8878394488784023887834308878361988785981887861290.162000.000000.00005includedK562SF3B1
SEMAP3K7ENSG00000135341.13chr6-9126269791262887912617679126189891263176912633050.101000.000010.00071includedK562SF3B1





34 RBPs can affect the splicing of SF3B1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.064000.000000.00009includedHepG2G3BP1
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.090000.000000.00013includedHepG2FASTKD2
SESF3B1ENSG00000115524.11chr2-1982636921982637621982631841982633051982647781982648900.119000.000000.00000includedK562SRSF1
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.082000.000000.00000includedHepG2RBM22
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.102000.000000.00000includedHepG2DHX30
SESF3B1ENSG00000115524.11chr2-198288617198288698198285752198285857198299695198299740-0.060000.002190.02721excludedHepG2U2AF2
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.084000.000010.01153includedHepG2LIN28B
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.094000.000030.01205includedHepG2UCHL5
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.052000.000020.00728includedHepG2TIA1
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.124000.000000.00000includedHepG2HNRNPA1
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.135000.000000.00000includedHepG2HNRNPL
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.082000.000000.00001includedHepG2IGF2BP3
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.107000.000000.00000includedHepG2TIAL1
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.057000.000000.00162includedHepG2RBFOX2
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.108000.000000.00000includedHepG2SUPV3L1
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.084000.000000.00241includedHepG2BCCIP
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.082000.000000.01148includedHepG2EIF3H
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.051000.000040.01741includedHepG2NOL12
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.058000.000070.02187includedHepG2DDX55
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.073000.000000.00266includedHepG2EIF3D
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.061000.000000.00238includedHepG2FUBP3
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.067000.000040.02130includedHepG2XRN2
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.117000.000000.00000includedHepG2HNRNPU
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.053000.000010.00053includedHepG2HNRNPC
SESF3B1ENSG00000115524.11chr2-1982636921982637621982631841982633051982647781982648900.057000.000000.00000includedHepG2HNRNPC
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.061000.000000.00039includedHepG2SRSF9
SESF3B1ENSG00000115524.11chr2-1982636921982637621982631841982633051982647781982648900.067000.000000.00000includedHepG2SRSF9
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.079000.000000.00034includedHepG2FUS
SESF3B1ENSG00000115524.11chr2-1982836191982836751982832321982833121982851511982852660.056000.000000.00131includedHepG2KHSRP
SESF3B1ENSG00000115524.11chr2-1982636921982637621982631841982633051982647781982648900.066000.000000.00000includedK562HNRNPC
A3SSSF3B1ENSG00000115524.11chr2-1982683081982685211982683081982684881982697991982699010.086000.000000.00000longerK562AQR
A3SSSF3B1ENSG00000115524.11chr2-1982676721982678831982676721982677591982683081982684880.087000.000000.00000longerK562AQR
A3SSSF3B1ENSG00000115524.11chr2-1982814641982817091982814641982816351982832321982848390.093000.000000.00000longerK562AQR
A3SSSF3B1ENSG00000115524.11chr2-1982631841982633271982631841982633051982647781982648900.060000.000000.00000longerK562AQR
A3SSSF3B1ENSG00000115524.11chr2-1982667081982669371982667081982668541982672791982675500.053000.000000.00000longerK562AQR
RISF3B1ENSG00000115524.11chr2-198283519198285266198283519198283675198285151198285266-0.080000.001700.06648excludedHepG2SFPQ
RISF3B1ENSG00000115524.11chr2-198283519198285266198283519198283675198285151198285266-0.167000.000040.00054excludedHepG2U2AF2
RISF3B1ENSG00000115524.11chr2-198284904198285266198284904198284955198285151198285266-0.125000.006610.06603excludedHepG2PRPF8
RISF3B1ENSG00000115524.11chr2-1982835191982852661982835191982836751982851511982852660.113000.004880.08562includedHepG2FTO
RISF3B1ENSG00000115524.11chr2-198284904198285266198284904198284955198285151198285266-0.085000.001580.06200excludedHepG2HNRNPC
RISF3B1ENSG00000115524.11chr2-1982835191982852661982835191982836751982851511982852660.235000.002470.09241includedK562SBDS
RISF3B1ENSG00000115524.11chr2-198284904198285266198284904198284955198285151198285266-0.124000.000190.00329excludedHepG2RBM22
RISF3B1ENSG00000115524.11chr2-198284904198285266198284904198284955198285151198285266-0.296000.002860.07972excludedK562TARDBP
RISF3B1ENSG00000115524.11chr2-198283519198285266198283519198283675198285151198285266-0.121000.000120.01987excludedHepG2CDC40
MXESF3B1ENSG00000115524.11chr2-198283619198283675198285752198285857198283232198283312198288531198288698-0.061000.000000.000002includedK562AQR
MXESF3B1ENSG00000115524.11chr2-1982627081982628401982631841982633051982607791982610521982647781982648900.077000.009550.090151includedK562U2AF2
MXESF3B1ENSG00000115524.11chr2-198274493198274731198281464198281635198273092198273305198283232198283312-0.125000.000170.009512includedHepG2TIAL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





No autoregularoty alternative splicing events between protein SF3B1 and its RNA.